View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11625_low_1 (Length: 911)
Name: NF11625_low_1
Description: NF11625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11625_low_1 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 825; Significance: 0; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 825; E-Value: 0
Query Start/End: Original strand, 19 - 904
Target Start/End: Complemental strand, 4183227 - 4182343
Alignment:
| Q |
19 |
gccatatgatggtcgtagtggtagttctggaaaggtcattgtttctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4183227 |
gccatatgatggtcgtagtggtagttctggaaaggtcattgtttctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatc |
4183128 |
T |
|
| Q |
119 |
caatctgaaactgacaataccttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4183127 |
caatctgaaactgacaataccttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatg |
4183028 |
T |
|
| Q |
219 |
gaaatggacaatcttggactaaattgttaagtgttcctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgacca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4183027 |
gaaatggacaatcttggactaaattgttaagtgttcctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgacca |
4182928 |
T |
|
| Q |
319 |
agtgctgatgtattttatgaagaggaggaaatttagtttggctgtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaa |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4182927 |
agtgctgatgtattttatgaagaggaggaaatttagtttggctgtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaa |
4182828 |
T |
|
| Q |
419 |
gttccgatggaaggaagattctattttccatacgtctacgttgagagtttgatatcaccnnnnnnncaggattaggatgtggatgttgtgctatgtgaaa |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
4182827 |
gttccgatggaaggaagattctattttccatacgtctacattgagagtttgatatcacctttttttcaggattaggatgtagatgttgtgctatgtgaaa |
4182728 |
T |
|
| Q |
519 |
ctatgaacttgttatttatttatacttgttctggttaacaatgattttacgagttattgttaaattatggtatgtggaatatgcggcttgagatattgct |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4182727 |
ctatgaacttgttatttatttatacttgttctggttaacaatgattttacgagttattgttaaattatggtatgtggaatatgcggcttgagatattgct |
4182628 |
T |
|
| Q |
619 |
atgttcttttaatttatttatgggttagagttgcggttttgtcatcgtgcactacattttatatagttagtaaattattcaaatcttccaccatagattc |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4182627 |
atgttcttttaatttatttatgggttagagttgcggttttgtcatcgtgcactatattttatatagttagtaaattattcaaatcttccaccatagattc |
4182528 |
T |
|
| Q |
719 |
tcttatttttactctactactattttcaatatcataaagagatcgaatatttaaagttctgagacatccctttttggtagttgctttggtaatggtttgt |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
4182527 |
tcttatttttactctactactattttcaatatcatatagagatcgaatatttaaagttctgagacatccctttctggtagttgc-ttggtaatggtttgt |
4182429 |
T |
|
| Q |
819 |
accttgcagttttaacagttgtctgatttacatctaatttatcttccaactctaaattaatcaattcatcactgtttgtctctgct |
904 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4182428 |
atcttgcagttttaacagttgtctcatttacatctaatttatcttccaactctaaattaatcaattcatcactgtttgtttctgct |
4182343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 817; E-Value: 0
Query Start/End: Original strand, 19 - 904
Target Start/End: Complemental strand, 4744071 - 4743187
Alignment:
| Q |
19 |
gccatatgatggtcgtagtggtagttctggaaaggtcattgtttctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4744071 |
gccatatgatggtcgtagtggtagttctggaaaggtcattgtttctcttcatttgcagaaggagtcttatcaagagttttctcaccctctttatgatatc |
4743972 |
T |
|
| Q |
119 |
caatctgaaactgacaataccttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatg |
218 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4743971 |
caatctgaaacttacaataccttgggggtgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatg |
4743872 |
T |
|
| Q |
219 |
gaaatggacaatcttggactaaattgttaagtgttcctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgacca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4743871 |
gaaatggacaatcttggactaaattgttaagtgttcctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgacca |
4743772 |
T |
|
| Q |
319 |
agtgctgatgtattttatgaagaggaggaaatttagtttggctgtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaa |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4743771 |
agtgctgatgtattttatgaagaggaggaaatttagtttggctgtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaa |
4743672 |
T |
|
| Q |
419 |
gttccgatggaaggaagattctattttccatacgtctacgttgagagtttgatatcaccnnnnnnncaggattaggatgtggatgttgtgctatgtgaaa |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
4743671 |
gttccgatggaaggaagattctattttccatacgtctacattgagagtttgatatcacctttttttcaggattaggatgtagatgttgtgctatgtgaaa |
4743572 |
T |
|
| Q |
519 |
ctatgaacttgttatttatttatacttgttctggttaacaatgattttacgagttattgttaaattatggtatgtggaatatgcggcttgagatattgct |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4743571 |
ctatgaacttgttatttatttatacttgttctggttaacaatgattttacgagttattgttaaattatggtatgtggaatatgcggcttgagatattgct |
4743472 |
T |
|
| Q |
619 |
atgttcttttaatttatttatgggttagagttgcggttttgtcatcgtgcactacattttatatagttagtaaattattcaaatcttccaccatagattc |
718 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4743471 |
atgttcttttaatttatttattggttagagttgcggttttgtcatcgtgcactacattttatatagttagtaaattattcaaatcttccaccatagattc |
4743372 |
T |
|
| Q |
719 |
tcttatttttactctactactattttcaatatcataaagagatcgaatatttaaagttctgagacatccctttttggtagttgctttggtaatggtttgt |
818 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
4743371 |
tcttatttttactctactactattttcaatatcataaagagatcgaatatttaaagttctgagacatccctttctggtagttgc-ttggtaatggtttgt |
4743273 |
T |
|
| Q |
819 |
accttgcagttttaacagttgtctgatttacatctaatttatcttccaactctaaattaatcaattcatcactgtttgtctctgct |
904 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4743272 |
atcttgcagttttaacagttgtctcatttacatctaatttatcttccaactctaaattaatcaattcatcactgtttgtttctgct |
4743187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 24417591 - 24417486
Alignment:
| Q |
140 |
ttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggacta |
239 |
Q |
| |
|
|||||| | |||||||||||||||||||| || | | ||||| |||||| |||||||||| ||||| |||||||||||| | |||||||||||| |
|
|
| T |
24417591 |
ttgggggttttgagggattgtttgtgcatcattacaaccggtgacgtgtttttaaatgtttggattatgaaagaatatggaaataaagaatcttggacta |
24417492 |
T |
|
| Q |
240 |
aattgt |
245 |
Q |
| |
|
|||||| |
|
|
| T |
24417491 |
aattgt |
24417486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 19119065 - 19119115
Alignment:
| Q |
196 |
tgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
||||||| | ||||||||||||||||||| | | ||||||||||||||||| |
|
|
| T |
19119065 |
tgtttggttgatgaaggaatatggaaatgaagagtcttggactaaattgtt |
19119115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 19126359 - 19126409
Alignment:
| Q |
196 |
tgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
||||||| | ||||||||||||||||||| | | ||||||||||||||||| |
|
|
| T |
19126359 |
tgtttggttgatgaaggaatatggaaatgaagagtcttggactaaattgtt |
19126409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 62 - 678
Target Start/End: Complemental strand, 51756933 - 51756321
Alignment:
| Q |
62 |
tctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatccaatctgaaactgacaataccttggggatgttgagggattgtt |
161 |
Q |
| |
|
|||||| ||||| ||||||||| | ||||||||||| |||||||||| ||||| |||| |||| | ||| || ||||||| ||||||||||||||| |
|
|
| T |
51756933 |
tctcttgatttggagaaggagttgtctcaagagcttttgcaccctctttgtgataaccaacaagaaaattacattatcttgggggtgttgagggattgtt |
51756834 |
T |
|
| Q |
162 |
tgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcctcaaat |
261 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51756833 |
tgtgcattttttctcaaagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcctcaaat |
51756734 |
T |
|
| Q |
262 |
gggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgaccaagtgctgatgtattttatgaagaggaggaaatttagtttggct |
361 |
Q |
| |
|
||||||| |||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
51756733 |
gggagatcattatatctat------accaaaccattatatatttctgaggatgaccaagtgctgatgtattttgtgaagaggggaaaatttagtttggct |
51756640 |
T |
|
| Q |
362 |
gtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaagttccgatggaa--ggaagattctattttccatacgtctacgt |
459 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||| |||||| || | || |||| | |||| || | ||||| | ||| || | |
|
|
| T |
51756639 |
ttctatgattccataaatgatacttttaagattcctgaagcccaaaacaacattcatgatctgatgatacctgaagtttgca--ttccagaagtccactt |
51756542 |
T |
|
| Q |
460 |
tgagagtttgatatcaccnnnnnnncaggattaggatgtggatgttgtgctatgtgaaactatgaacttgttattt-atttatacttgttctggttaaca |
558 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| | |||||||||| ||||||| |||| |||||||||| |||||| ||| ||||||||| || |
|
|
| T |
51756541 |
tgagagtttgatatcacctttatctcagtattaggatttagatgttgtgcaatgtgaacttatggtcttgttatttgatttatgctttttctggttacca |
51756442 |
T |
|
| Q |
559 |
atgattttacgagttattgttaaattatggtatgtggaatatgcggcttgagatattgctatgttcttttaatttatttatgggttagagttg-cggttt |
657 |
Q |
| |
|
|||| ||||| ||||||||||| ||||| | || | |||||| ||||||||| ||||||||||| |||| |||||||| | |||||||||| | ||| |
|
|
| T |
51756441 |
atgacattacgggttattgttaatttatgatgtgagaaatatgaggcttgagaaattgctatgttattttcatttatttgttagttagagttgttgattt |
51756342 |
T |
|
| Q |
658 |
tgtcatcgtgcactacatttt |
678 |
Q |
| |
|
||||||| |||| |||||||| |
|
|
| T |
51756341 |
tgtcatcatgcattacatttt |
51756321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 52 - 687
Target Start/End: Original strand, 51854805 - 51855432
Alignment:
| Q |
52 |
ggtcattgtttctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatccaatctgaaactgacaataccttggggatgttg |
151 |
Q |
| |
|
|||||||||||||||| ||||| |||| | || ||||||||| ||||||||||||||||||| | || ||| || | || |||||||||| ||||| |
|
|
| T |
51854805 |
ggtcattgtttctcttgatttggagaatgggttgtatcaagagttttctcaccctctttatgactacgaacctgcaaatcgcattaccttgggggtgttg |
51854904 |
T |
|
| Q |
152 |
agggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtg |
251 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| |
|
|
| T |
51854905 |
agggattgtttgtgcactttttctagtagtgagaagttttctgatgtttggatcatgaaagaatatggaaatgtagaatcttggactaaattgttatgtg |
51855004 |
T |
|
| Q |
252 |
ttcctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgaccaagtgctgatgtattttatgaagaggaggaaatt |
351 |
Q |
| |
|
||||||||||||||| | | ||||||| || |||||||||||||| ||||| ||||||||||||||| ||||||| | |||| | |||| || |
|
|
| T |
51855005 |
ttcctcaaatgggaggctgtggttgttatatctataccaaaccattatatatatctgaagatgaccaagtgctgacgtattttttcaagatggggaagtt |
51855104 |
T |
|
| Q |
352 |
tagtttggctgtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaagttccgatggaaggaagattctattttccatac |
451 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||| ||||| | || | | | | | ||| ||||| | |
|
|
| T |
51855105 |
tagtttggctgtctatgattccatccatgatactttgaagattcctgcaattcaaaacaatatccatgatc---tcgtaccagaagcctaccttccagaa |
51855201 |
T |
|
| Q |
452 |
gtctacgttgagagtttgatatcaccnnnnnnncaggattaggatgtggatgttgtgctatgtgaaactatgaacttgttattta-tttatacttgttct |
550 |
Q |
| |
|
||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||| || ||||| |
|
|
| T |
51855202 |
atctactttgaaagtttgatatcacatttttctcaggattaggatgtagatgttgtgctatgtgaacttatgatcttgttatttattttatgctggttct |
51855301 |
T |
|
| Q |
551 |
ggttaacaatgattttacgagttattgttaaattatggtatgtggaatatgcggcttgagatattgctatgttcttttaatttatttatgggttagagtt |
650 |
Q |
| |
|
||||| |||||| || ||| |||| |||| | ||||||| | ||||||||||||||||||| | ||||| ||| ||| ||||| |||| |||||| |
|
|
| T |
51855302 |
ggttaccaatgacttcacgggttactgttgatttatggtgtatggaatatgcggcttgagaaactgctacgttatttcaattttcttattagttaga--- |
51855398 |
T |
|
| Q |
651 |
gcggttttgtcatcgtgcactacattttatatagtta |
687 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
51855399 |
---gttttgtcatcgtgcattacattttatatagtta |
51855432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 52 - 609
Target Start/End: Original strand, 51858464 - 51859022
Alignment:
| Q |
52 |
ggtcattgtttctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatccaatctgaaactgacaataccttggggatgttg |
151 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||| | ||||||||||| ||||||||||||| || | || ||| |||| || | |||||||| || || |
|
|
| T |
51858464 |
ggtcattgtttctcttgatttggagaatgagttgtgtcaagagctttttcaccctctttataattacaaacctggaacttgcattgccttgggggtgctg |
51858563 |
T |
|
| Q |
152 |
agggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtg |
251 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
51858564 |
agggattgcttgtgcattttttctcatagtgacaagttttctgatgtttggatcatgaaggaatatggaaatgtagaatcttggactaaattgttaagtg |
51858663 |
T |
|
| Q |
252 |
ttcctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgaccaagtgctgatgtattttatgaagaggaggaaatt |
351 |
Q |
| |
|
||||||||||||||| | | | ||||||| || ||| ||||||||| ||||| ||| || | ||||||| |||||| | ||||| ||||||| |
|
|
| T |
51858664 |
ttcctcaaatgggaggttgtggttgttatatctataccaaagtattatatatatctgaagatggcctaatgctgatatattttttcaagagagggaaatt |
51858763 |
T |
|
| Q |
352 |
tagtttggctgtctatgattccataaatgatacttataagattcctgaaattcaaggcaacatccaagttccgatggaaggaagattctattttccatac |
451 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| | |||||||||||||||||| ||| ||||| | || | | || |||| |||| ||||| | |
|
|
| T |
51858764 |
taggttggctgtctatgattccattaatgatacattgaagattcctgaaattcaaaacaatatccatgatctggt-aaaagaag--tctaccttccagaa |
51858860 |
T |
|
| Q |
452 |
gtctacgttgagagtttgatatcaccnnnnnnncaggattaggatgtggatgttgtgctatgtgaaactatgaacttgttattta-tttatacttgttct |
550 |
Q |
| |
|
|||||| |||| | |||||||||||| ||| |||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |
|
|
| T |
51858861 |
gtctacattgaaactttgatatcacctctttctcagtattaagatgtagatgttgtgctatgtgaacttatgatcttgttatttattttatgcttgttct |
51858960 |
T |
|
| Q |
551 |
ggtt---aacaatgattttacgagttattgttaaattatggtatgtggaatatgcggcttga |
609 |
Q |
| |
|
|||| | |||||| |||||||||||||||| | ||||||| | ||| |||||| |||||| |
|
|
| T |
51858961 |
ggttaccaccaatgactttacgagttattgttgatttatggtgtatggtatatgcagcttga |
51859022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 56 - 406
Target Start/End: Complemental strand, 51763119 - 51762771
Alignment:
| Q |
56 |
attgtttctcttcatttgcagaaggagtcttatcaagagctttctcaccctctttatgatatccaatctgaaactgacaataccttggggatgttgaggg |
155 |
Q |
| |
|
|||||||||||| |||| |||| |||| |||||||||||||||||||||| ||||||| |||| ||| || || || | || ||| ||||||||| |
|
|
| T |
51763119 |
attgtttctcttggtttggagaatgagttgtatcaagagctttctcaccctcattatgattaccaacctggaaatggcataa--ttaggg-tgttgaggg |
51763023 |
T |
|
| Q |
156 |
attgtttgtgcatttttt-ctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttc |
254 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51763022 |
attgtttgtgcatttttttctaatagtgacagcttttcttatttttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttc |
51762923 |
T |
|
| Q |
255 |
ctcaaatgggagatgcttatatatatatcttaactaaaccattatatatttctgagcatgaccaagtgctgatgtattttatgaagaggaggaaatttag |
354 |
Q |
| |
|
||||||| |||||| | | | ||| |||||| || |||||||||| ||||| |||||||||||||||||||| || |||||| | |||||||||| |
|
|
| T |
51762922 |
ctcaaataggagatcgtggtttttattccttaaccaaggcattatatatatctgaagatgaccaagtgctgatgtatattctgaagatggggaaatttag |
51762823 |
T |
|
| Q |
355 |
tttggctgtctatgattccataaatgatacttataagattcctgaaattcaa |
406 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
51762822 |
tttggttgtctatggttccataaatgatacttttaagattcctaaaattcaa |
51762771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 136 - 256
Target Start/End: Complemental strand, 51381564 - 51381444
Alignment:
| Q |
136 |
taccttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttgg |
235 |
Q |
| |
|
|||||||| | |||||||||||||||||||||| ||||| || | |||||||||| |||| ||||||| ||||| ||||||||||||| | | |||||| |
|
|
| T |
51381564 |
taccttggaggtgttgagggattgtttgtgcatcctttctcatggcgacaagttttctgatatttggattatgaaagaatatggaaatgaagagtcttgg |
51381465 |
T |
|
| Q |
236 |
actaaattgttaagtgttcct |
256 |
Q |
| |
|
||||||||||| ||| ||||| |
|
|
| T |
51381464 |
actaaattgttcagtattcct |
51381444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 51782790 - 51782869
Alignment:
| Q |
185 |
aagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcctcaaatggg |
264 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||| |
|
|
| T |
51782790 |
aagttttatgatgtttggattatgaaggaatatggaaatgaacaatcttggaataaattattaagtgttcctaaaatggg |
51782869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 51832306 - 51832448
Alignment:
| Q |
133 |
caataccttggggatgttgagggattgtttgtgcatttttt------ctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatgga |
226 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||| || |||| ||||||||| ||| ||||||| ||||| ||||||||||||| | |
|
|
| T |
51832306 |
caataccttgggggtgttgagggattgtttgtgcattctttatcattctcatagacacaagttttccgatatttggataatgaaagaatatggaaatgaa |
51832405 |
T |
|
| Q |
227 |
caatcttggactaaattgttaagtgttcctcaaatgggagatg |
269 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||| ||||| |
|
|
| T |
51832406 |
caatcttggactaaattgttgagcattcctcatatggaagatg |
51832448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 51407604 - 51407546
Alignment:
| Q |
200 |
tggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcctca |
258 |
Q |
| |
|
||||| |||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
51407604 |
tggattatgaaggaatatgggaatgaacagtcttggactaaattgttaagtgttcctca |
51407546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 406
Target Start/End: Complemental strand, 51381403 - 51381294
Alignment:
| Q |
297 |
tatatatttctgagcatgaccaagtgctgatgtattttatgaagaggaggaaatttagtttggctgtctatgattccataaatgatacttataagattcc |
396 |
Q |
| |
|
|||||||||| || |||||||||| ||||| | ||| | |||| | ||||||| |||||| |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
51381403 |
tatatatttcggaagatgaccaagttttgatgcagtttctaaagatggggaaattcagtttgcttgtctatgattccaaaaatgatactttgaagattcc |
51381304 |
T |
|
| Q |
397 |
tgaaattcaa |
406 |
Q |
| |
|
|||||||||| |
|
|
| T |
51381303 |
tgaaattcaa |
51381294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 268
Target Start/End: Complemental strand, 51221312 - 51221193
Alignment:
| Q |
149 |
ttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaa |
248 |
Q |
| |
|
||||||| ||||||| || | ||||||| ||||||| ||||| |||||||||||| ||||| ||||| || |||| | | |||||||||| ||||||| |
|
|
| T |
51221312 |
ttgaggggttgtttgagcgtcgtttctaacagtgacatgttttctgatgtttggataatgaatgaatacgggaatgaaaattcttggactatattgttac |
51221213 |
T |
|
| Q |
249 |
gtgttcctcaaatgggagat |
268 |
Q |
| |
|
| |||||||| ||| ||||| |
|
|
| T |
51221212 |
gggttcctcacatgagagat |
51221193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 51829766 - 51829827
Alignment:
| Q |
183 |
acaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattg |
244 |
Q |
| |
|
|||| ||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||||||| |
|
|
| T |
51829766 |
acaactttttcgatgtttggataatgaaagaatatggaaatgaccaatcttggattaaattg |
51829827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 51221116 - 51221064
Alignment:
| Q |
345 |
ggaaatttagtttggctgtctatgattccataaatgatacttataagattcct |
397 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||| |||| | |||||||||| |
|
|
| T |
51221116 |
ggaaatttagtttggttatctatgattccataaataatacatttaagattcct |
51221064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 33038106 - 33038188
Alignment:
| Q |
140 |
ttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaa |
222 |
Q |
| |
|
|||||| | ||||||||||| |||||||| ||| | | |||||| | |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
33038106 |
ttgggggttttgagggattgcttgtgcatctttgcaagtagtgatatgttttttgatgtttggattatgaaggaatatggaaa |
33038188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 33020259 - 33020364
Alignment:
| Q |
140 |
ttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggacta |
239 |
Q |
| |
|
|||||| | ||||||||||| |||||| | ||| | |||||||| | ||||||| |||| ||||| |||||||||||||||||| | | |||||||||| |
|
|
| T |
33020259 |
ttgggggttttgagggattgcttgtgcttctttgcaaatagtgatatgttttttaatgtgtggattatgaaggaatatggaaataaaaagtcttggacta |
33020358 |
T |
|
| Q |
240 |
aattgt |
245 |
Q |
| |
|
||||| |
|
|
| T |
33020359 |
gattgt |
33020364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 7168798 - 7168666
Alignment:
| Q |
137 |
accttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttgga |
236 |
Q |
| |
|
||||| ||| ||||||||||||| ||||| ||| || || ||||||| | ||||| || |||||| | |||||||||||||||||| | ||||||| |
|
|
| T |
7168798 |
accttaggggtgttgagggattgcttgtgtattcttgctcatagtgatacgttttcagacgtttggcttatgaaggaatatggaaataacgattcttgga |
7168699 |
T |
|
| Q |
237 |
ctaaattgttaagtgttcctcaaatgggagatg |
269 |
Q |
| |
|
|||||||||| | |||||| | |||||||||| |
|
|
| T |
7168698 |
ctaaattgttccgagttccttacatgggagatg |
7168666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 7156243 - 7156166
Alignment:
| Q |
194 |
gatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcctcaaatgggagatgct |
271 |
Q |
| |
|
||||||||| | |||||||| |||||||||| | | |||||| |||||||||| |||||||| | |||||||||||| |
|
|
| T |
7156243 |
gatgtttggcttatgaaggagtatggaaatgaagattcttgggctaaattgttccgtgttccttacatgggagatgct |
7156166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 11237646 - 11237755
Alignment:
| Q |
147 |
tgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
||||||||||| | |||||||| || || ||||| | | ||||| ||||||||| | ||| |||| ||||||||| || || |||||||||||||||| |
|
|
| T |
11237646 |
tgttgagggatcgcatgtgcattcttgctcatagtcatacttttttcgatgtttggcttatggaggagtatggaaatagagaaacttggactaaattgtt |
11237745 |
T |
|
| Q |
247 |
aagtgttcct |
256 |
Q |
| |
|
|||||||| |
|
|
| T |
11237746 |
ccgtgttcct |
11237755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 771605 - 771499
Alignment:
| Q |
139 |
cttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggact |
238 |
Q |
| |
|
||||||| |||||| ||||| |||||||||||| | ||| |||| | ||||| ||||||||| | |||||||||||||||||| | | ||||||||| |
|
|
| T |
771605 |
cttgggggtgttgaaagattgcttgtgcatttttgcaaattgtgatatgttttgggatgtttgggttatgaaggaatatggaaatacagactcttggact |
771506 |
T |
|
| Q |
239 |
aaattgt |
245 |
Q |
| |
|
||||||| |
|
|
| T |
771505 |
aaattgt |
771499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 7443035 - 7442960
Alignment:
| Q |
187 |
gttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcctcaaatg |
262 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||| | | ||||||||||| |||| ||||||||| ||||| |
|
|
| T |
7443035 |
gttttttaatgtttggatcatgaaggagtatggaaatcaagagtcttggactaagttgtatagtgttcctaaaatg |
7442960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 2456210 - 2456300
Alignment:
| Q |
155 |
gattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgt |
245 |
Q |
| |
|
||||| |||||||||||| | ||| |||| | ||||| ||||||||| | |||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
2456210 |
gattgcttgtgcatttttgcaaattgtgatatgttttgggatgtttgggttatgaaggaatatggaaataaagactcttggactaaattgt |
2456300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 2631341 - 2631419
Alignment:
| Q |
178 |
tagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcct |
256 |
Q |
| |
|
|||||| | |||||| |||||||||| |||||||||||||||||| | | |||||||||||||||| ||||||||| |
|
|
| T |
2631341 |
tagtgatatgtttttgaatgtttggattatgaaggaatatggaaatcaagagtcttggactaaattgtgcagtgttcct |
2631419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 23197014 - 23197064
Alignment:
| Q |
196 |
tgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
||||||| | ||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
23197014 |
tgtttggctgatgaaggaatatggaaatgaagaatcttggactaaattgtt |
23197064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 2492083 - 2492144
Alignment:
| Q |
195 |
atgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcct |
256 |
Q |
| |
|
|||||||||| |||||||| ||||||||| || | |||||||||||||||| ||||||||| |
|
|
| T |
2492083 |
atgtttggattatgaaggagtatggaaatcgagagtcttggactaaattgtatagtgttcct |
2492144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 43991953 - 43992022
Alignment:
| Q |
187 |
gttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgttaagtgttcct |
256 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| | | |||||||| ||||||| ||||||||| |
|
|
| T |
43991953 |
gtttttggatgtttggattatgaaggaatatggaaatatagagtcttggaccaaattgtatagtgttcct |
43992022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 9608402 - 9608346
Alignment:
| Q |
187 |
gttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaatt |
243 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| | | |||||||||||||| |
|
|
| T |
9608402 |
gttttttgatgtttgggttatgaaggaatatggaaatatagattcttggactaaatt |
9608346 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 13498177 - 13498273
Alignment:
| Q |
147 |
tgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaatt |
243 |
Q |
| |
|
|||||| |||||| |||||||| ||||| ||| ||| | ||| | ||||||||||| |||||||||||||||||| | | |||||||||||||| |
|
|
| T |
13498177 |
tgttgaaggattgcttgtgcatattttcacataatgatatctttgtggatgtttggattatgaaggaatatggaaataaagagtcttggactaaatt |
13498273 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 3754598 - 3754652
Alignment:
| Q |
192 |
ttgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
||||||||||| | |||||||||||||||||| | | ||||||||||||||||| |
|
|
| T |
3754598 |
ttgatgtttgggttatgaaggaatatggaaataaagagtcttggactaaattgtt |
3754652 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 2696784 - 2696731
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | | ||||||| ||||||||| |
|
|
| T |
2696784 |
tgatgtttggattatgaaggaatatggaaataaagagtcttggattaaattgtt |
2696731 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 4142186 - 4142133
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
|||||||||| | |||||||||||||||||| | | ||||||||||||||||| |
|
|
| T |
4142186 |
tgatgtttggcttatgaaggaatatggaaataaagagtcttggactaaattgtt |
4142133 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 4157996 - 4157943
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
|||||||||| | |||||||||||||||||| | | ||||||||||||||||| |
|
|
| T |
4157996 |
tgatgtttggcttatgaaggaatatggaaataaagagtcttggactaaattgtt |
4157943 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 7432106 - 7432053
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||| |||||||||||||| |
|
|
| T |
7432106 |
tgatgtttggagtatgaaggaatatggaaataaagaatcgtggactaaattgtt |
7432053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 89086 - 89194
Alignment:
| Q |
137 |
accttggggatgttgagggattgtttgtgcattttttctaatagtgacaagttttttgatgtttggatcatgaaggaatatggaaatggacaatcttgga |
236 |
Q |
| |
|
||||||||| |||| | |||||| |||||||| ||| | | |||||| | ||||||||| ||||| | |||||||||||||||||| | | ||||||| |
|
|
| T |
89086 |
accttgggggtgttaacggattgcttgtgcatctttacaagtagtgatatattttttgatatttgggttatgaaggaatatggaaataaagagtcttgga |
89185 |
T |
|
| Q |
237 |
ctaaattgt |
245 |
Q |
| |
|
||||||||| |
|
|
| T |
89186 |
ctaaattgt |
89194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 24723213 - 24723253
Alignment:
| Q |
56 |
attgtttctcttcatttgcagaaggagtcttatcaagagct |
96 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
24723213 |
attgtttctcttgatttggagaaggagtcttatcaagagct |
24723253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 23766914 - 23766861
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| | | ||||||||||||||||| |
|
|
| T |
23766914 |
tgatgtttggattatgaaagaatatggaaataaagagtcttggactaaattgtt |
23766861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 23816762 - 23816709
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| | | ||||||||||||||||| |
|
|
| T |
23816762 |
tgatgtttggattatgaaagaatatggaaataaagagtcttggactaaattgtt |
23816709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 20019824 - 20019771
Alignment:
| Q |
193 |
tgatgtttggatcatgaaggaatatggaaatggacaatcttggactaaattgtt |
246 |
Q |
| |
|
|||||||||| |||||||||||||||||| | | | ||||||||||||||||| |
|
|
| T |
20019824 |
tgatgtttgggtcatgaaggaatatggaattcaagagtcttggactaaattgtt |
20019771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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