View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11625_low_68 (Length: 203)
Name: NF11625_low_68
Description: NF11625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11625_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 5807047 - 5807224
Alignment:
| Q |
18 |
actaggctgataaccactacgtgccttcaaaaaacttgttctcggaaagtacctactcttaaacacccatgaaaggagagagtgttcagtggacatcagc |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
5807047 |
actaggctgataaccactacgtgccttcaaaaaacttgttctcggaaagtacctactcttaaacacccatgaaaggagagagtgttcattggacatcagc |
5807146 |
T |
|
| Q |
118 |
cgccaccattgctttcctaagagagctttgttgaactcgttgaatcctctaaaaccgagacctccttttccctttgct |
195 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
5807147 |
cgccaccattgctttcataagagagctttgttgaactcgttgaatcctctaaaaccgagacctccttttccttttgct |
5807224 |
T |
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