View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11626_high_13 (Length: 435)
Name: NF11626_high_13
Description: NF11626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11626_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 37511284 - 37510859
Alignment:
| Q |
1 |
atagcttgggtttggcacaagcacatactttatgaattttttaatgggcttggaaaatgaatattttctcgttaatatgacccaaagattaaacattaaa |
100 |
Q |
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| T |
37511284 |
atagcttgggtttggcacaagcacatactttatgaattttttaatgggcttggaaaatgaatatttgctcgttaatatgacccaaagattaaacattaaa |
37511185 |
T |
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| Q |
101 |
cnnnnnnnnggtatactactatgaaggagaaaacttatcggattgaattagatgtgttctggtgtcggatacatgatatgtctatcacttagatgtcggc |
200 |
Q |
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| T |
37511184 |
cttttttttggtatactactatgaaggagaacacttatcggattggattagatgtgttctggtgtcggatacatgttatgtctatcacttaaatgtcggc |
37511085 |
T |
|
| Q |
201 |
ggcttgtt-----gcatcaagtctggtgtctatgtttgtgcttaatagcttgtagatgagttctttnnnnnnnnnttttaaaagaatcatactgtttcac |
295 |
Q |
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| T |
37511084 |
ggcttgtcttgtcgtatcaagtctggtgtctatgtttgtgcttaatagcttgtagatgagttctttaaaaaaaa-ttctaaaagaatcatactgtttcac |
37510986 |
T |
|
| Q |
296 |
gaatacattgaacaacagatttttggcacgagaaataattttctaaatttttgctatgaactttgaagtcaaaatctgttgcacaatggtagagcgcaga |
395 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37510985 |
gaatacattgaacaacaaatttttggcacgagaaataattttctaaatttttgctatgaactttgaagtcaaaatctgttgcacaatggtagagcgcaga |
37510886 |
T |
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| Q |
396 |
agtcgttcaacgttttttattaatttc |
422 |
Q |
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| T |
37510885 |
agtcgttcaacgtttttgattaatttc |
37510859 |
T |
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