View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11626_low_1 (Length: 1034)

Name: NF11626_low_1
Description: NF11626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11626_low_1
NF11626_low_1
[»] chr6 (53 HSPs)
chr6 (18-1027)||(24884503-24885514)
chr6 (110-361)||(2407524-2407786)
chr6 (110-278)||(2405634-2405802)
chr6 (513-706)||(29953815-29954009)
chr6 (513-706)||(24941884-24942078)
chr6 (513-706)||(30053111-30053305)
chr6 (513-706)||(30149211-30149405)
chr6 (513-706)||(29950018-29950212)
chr6 (513-706)||(30154184-30154378)
chr6 (513-706)||(24934351-24934545)
chr6 (513-704)||(21160746-21160938)
chr6 (513-706)||(24739316-24739510)
chr6 (558-684)||(30132417-30132542)
chr6 (18-116)||(2405834-2405932)
chr6 (513-706)||(30577889-30578083)
chr6 (37-106)||(2407419-2407488)
chr6 (19-103)||(3502165-3502249)
chr6 (51-103)||(24085617-24085669)
chr6 (595-687)||(30134855-30134947)
chr6 (397-501)||(24719875-24719981)
chr6 (113-187)||(15863463-15863536)
chr6 (19-88)||(31771239-31771308)
chr6 (23-103)||(26173097-26173177)
chr6 (51-103)||(32643103-32643155)
chr6 (357-400)||(27616738-27616781)
chr6 (890-965)||(32599771-32599846)
chr6 (369-469)||(3385007-3385107)
chr6 (513-677)||(24730568-24730733)
chr6 (51-103)||(18001601-18001653)
chr6 (357-400)||(13382652-13382695)
chr6 (357-400)||(26712230-26712273)
chr6 (617-683)||(28926773-28926839)
chr6 (513-550)||(24897918-24897955)
chr6 (21-106)||(27638933-27639018)
chr6 (359-400)||(28249910-28249951)
chr6 (299-354)||(2405573-2405628)
chr6 (357-400)||(18351650-18351693)
chr6 (21-88)||(22304415-22304482)
chr6 (357-400)||(26712071-26712114)
chr6 (600-694)||(15715195-15715289)
chr6 (334-400)||(17596941-17597007)
chr6 (358-400)||(26351103-26351145)
chr6 (617-683)||(29099050-29099116)
chr6 (617-683)||(29115968-29116034)
chr6 (617-683)||(29897784-29897850)
chr6 (641-679)||(30028849-30028887)
chr6 (333-378)||(2405505-2405550)
chr6 (21-82)||(6204334-6204395)
chr6 (388-449)||(9048063-9048124)
chr6 (21-82)||(11691301-11691362)
chr6 (21-82)||(30826429-30826490)
chr6 (615-676)||(31000162-31000223)
chr6 (18-83)||(32641674-32641739)
[»] chr4 (64 HSPs)
chr4 (110-405)||(51686414-51686724)
chr4 (110-350)||(41930574-41930810)
chr4 (110-285)||(50904627-50904800)
chr4 (513-706)||(44262714-44262908)
chr4 (172-284)||(30708258-30708370)
chr4 (369-502)||(8111420-8111555)
chr4 (368-500)||(9013873-9014007)
chr4 (167-284)||(12892256-12892373)
chr4 (371-497)||(30703956-30704084)
chr4 (18-103)||(8110327-8110412)
chr4 (18-106)||(51686290-51686378)
chr4 (19-100)||(50196507-50196588)
chr4 (18-116)||(41930842-41930940)
chr4 (167-240)||(40886235-40886308)
chr4 (36-100)||(50020497-50020561)
chr4 (21-103)||(37016394-37016476)
chr4 (368-462)||(44680078-44680172)
chr4 (368-466)||(50023551-50023649)
chr4 (368-466)||(50030669-50030767)
chr4 (18-98)||(14317785-14317865)
chr4 (21-109)||(21018376-21018464)
chr4 (368-496)||(50020056-50020186)
chr4 (66-107)||(46439237-46439278)
chr4 (47-103)||(72142-72198)
chr4 (36-104)||(12892100-12892168)
chr4 (51-103)||(13624326-13624378)
chr4 (388-466)||(38368202-38368277)
chr4 (357-400)||(37563287-37563330)
chr4 (388-500)||(40061185-40061299)
chr4 (357-400)||(40358287-40358330)
chr4 (357-400)||(41800944-41800987)
chr4 (357-400)||(49563863-49563906)
chr4 (36-103)||(50278333-50278400)
chr4 (357-400)||(54634022-54634065)
chr4 (359-404)||(29700305-29700350)
chr4 (21-106)||(30723528-30723613)
chr4 (21-82)||(31424925-31424986)
chr4 (359-400)||(31425325-31425366)
chr4 (21-82)||(44674656-44674717)
chr4 (368-400)||(21018068-21018100)
chr4 (368-400)||(40354639-40354671)
chr4 (336-400)||(41933629-41933693)
chr4 (357-401)||(54633835-54633879)
chr4 (357-400)||(1089591-1089634)
chr4 (359-406)||(20208535-20208582)
chr4 (357-400)||(30726748-30726791)
chr4 (357-400)||(37563088-37563131)
chr4 (357-400)||(39773427-39773470)
chr4 (357-400)||(49169104-49169147)
chr4 (357-400)||(52529236-52529279)
chr4 (359-397)||(3408250-3408288)
chr4 (388-466)||(7485685-7485763)
chr4 (358-400)||(11494567-11494609)
chr4 (420-501)||(11566858-11566940)
chr4 (358-400)||(26792251-26792293)
chr4 (358-400)||(28234440-28234482)
chr4 (425-496)||(37856805-37856878)
chr4 (369-500)||(50196915-50197048)
chr4 (388-466)||(51037492-51037570)
chr4 (358-400)||(56565781-56565823)
chr4 (21-82)||(1305945-1306006)
chr4 (425-466)||(3183952-3183993)
chr4 (21-82)||(6178615-6178676)
chr4 (359-400)||(26932609-26932650)
[»] chr1 (46 HSPs)
chr1 (110-466)||(11197165-11197528)
chr1 (172-502)||(38119514-38119851)
chr1 (110-284)||(23273002-23273176)
chr1 (167-309)||(16269334-16269476)
chr1 (39-109)||(22527197-22527267)
chr1 (18-107)||(45828751-45828840)
chr1 (368-500)||(38127494-38127628)
chr1 (36-116)||(38119942-38120022)
chr1 (19-103)||(47505523-47505607)
chr1 (23-109)||(11197043-11197129)
chr1 (368-500)||(21140960-21141094)
chr1 (18-103)||(51337080-51337165)
chr1 (19-103)||(94901-94982)
chr1 (368-501)||(47505889-47506024)
chr1 (51-103)||(49854810-49854862)
chr1 (386-497)||(4208334-4208447)
chr1 (21-109)||(19159205-19159293)
chr1 (357-400)||(3943997-3944040)
chr1 (357-400)||(3993850-3993893)
chr1 (357-400)||(8548676-8548719)
chr1 (21-88)||(13636805-13636872)
chr1 (21-88)||(19522092-19522159)
chr1 (890-937)||(34577071-34577118)
chr1 (358-400)||(15051355-15051397)
chr1 (21-103)||(21144114-21144196)
chr1 (308-378)||(23272882-23272952)
chr1 (42-88)||(52805073-52805119)
chr1 (36-109)||(470581-470654)
chr1 (359-400)||(3728760-3728801)
chr1 (359-400)||(26879302-26879343)
chr1 (36-109)||(31780451-31780524)
chr1 (336-404)||(5845491-5845559)
chr1 (39-83)||(23273217-23273261)
chr1 (18-86)||(47661048-47661116)
chr1 (368-497)||(49395541-49395672)
chr1 (21-109)||(50617676-50617764)
chr1 (357-400)||(13633892-13633935)
chr1 (337-400)||(16270032-16270094)
chr1 (357-400)||(20353942-20353985)
chr1 (357-400)||(29622431-29622474)
chr1 (336-387)||(36183898-36183949)
chr1 (357-400)||(38771652-38771695)
chr1 (358-400)||(22524150-22524192)
chr1 (21-82)||(26878894-26878955)
chr1 (51-88)||(35256217-35256254)
chr1 (335-400)||(41459218-41459283)
[»] chr3 (68 HSPs)
chr3 (110-309)||(11380584-11380783)
chr3 (110-501)||(42759949-42760348)
chr3 (110-374)||(18752050-18752313)
chr3 (256-382)||(49195008-49195134)
chr3 (513-704)||(24226506-24226698)
chr3 (368-488)||(44523370-44523492)
chr3 (36-116)||(42759837-42759917)
chr3 (18-116)||(11380815-11380913)
chr3 (18-107)||(6928301-6928390)
chr3 (38-103)||(16861562-16861627)
chr3 (22-103)||(20353721-20353802)
chr3 (369-500)||(17561694-17561827)
chr3 (19-101)||(41615432-41615514)
chr3 (369-500)||(48566403-48566536)
chr3 (19-100)||(44232888-44232969)
chr3 (18-107)||(48565996-48566085)
chr3 (51-103)||(42804750-42804802)
chr3 (21-103)||(52388399-52388481)
chr3 (47-100)||(48891722-48891775)
chr3 (57-117)||(18751959-18752019)
chr3 (357-400)||(49144463-49144506)
chr3 (368-502)||(14043902-14044038)
chr3 (369-499)||(16861065-16861197)
chr3 (357-400)||(2967932-2967975)
chr3 (357-400)||(3501902-3501945)
chr3 (36-107)||(4005196-4005267)
chr3 (21-88)||(9473461-9473528)
chr3 (51-86)||(30252898-30252933)
chr3 (368-500)||(41612303-41612437)
chr3 (357-400)||(41844371-41844414)
chr3 (21-88)||(47070987-47071054)
chr3 (51-109)||(2271836-2271894)
chr3 (368-466)||(2274920-2275018)
chr3 (358-400)||(8475850-8475892)
chr3 (21-107)||(36130655-36130741)
chr3 (329-391)||(40871833-40871895)
chr3 (21-106)||(2648359-2648444)
chr3 (359-400)||(46697736-46697777)
chr3 (40-81)||(49266177-49266218)
chr3 (359-400)||(50477205-50477246)
chr3 (357-401)||(1835333-1835377)
chr3 (36-88)||(16646695-16646747)
chr3 (425-469)||(34645530-34645574)
chr3 (368-404)||(46344971-46345007)
chr3 (357-400)||(3953222-3953265)
chr3 (357-400)||(6745333-6745376)
chr3 (368-496)||(7941049-7941179)
chr3 (357-400)||(8156531-8156574)
chr3 (615-678)||(9628545-9628608)
chr3 (333-400)||(19440255-19440322)
chr3 (361-400)||(20918018-20918057)
chr3 (361-400)||(20926980-20927019)
chr3 (357-400)||(30943212-30943255)
chr3 (357-400)||(35743589-35743632)
chr3 (333-400)||(41802997-41803064)
chr3 (357-400)||(41844172-41844215)
chr3 (368-500)||(49265723-49265857)
chr3 (51-82)||(50213974-50214005)
chr3 (358-400)||(42165187-42165229)
chr3 (368-469)||(2062354-2062455)
chr3 (125-186)||(12374023-12374084)
chr3 (21-82)||(34048610-34048671)
chr3 (359-400)||(41579731-41579772)
chr3 (21-82)||(42900967-42901028)
chr3 (21-82)||(46698122-46698183)
chr3 (368-405)||(46989581-46989618)
chr3 (21-82)||(49141337-49141398)
chr3 (21-82)||(54389310-54389371)
[»] chr7 (47 HSPs)
chr7 (110-409)||(11629759-11630084)
chr7 (172-500)||(37344890-37345241)
chr7 (110-284)||(41735034-41735204)
chr7 (167-284)||(17747275-17747392)
chr7 (167-284)||(16488740-16488857)
chr7 (19-103)||(47521767-47521851)
chr7 (19-101)||(16680636-16680718)
chr7 (19-101)||(17654872-17654954)
chr7 (18-116)||(41734904-41735002)
chr7 (368-501)||(5541547-5541682)
chr7 (369-500)||(19804494-19804627)
chr7 (18-116)||(37343426-37343524)
chr7 (415-500)||(41734126-41734213)
chr7 (51-103)||(47669996-47670048)
chr7 (520-621)||(13093653-13093755)
chr7 (19-103)||(27450481-27450562)
chr7 (51-103)||(36980755-36980807)
chr7 (368-500)||(556649-556783)
chr7 (21-88)||(5538356-5538423)
chr7 (18-100)||(9491784-9491866)
chr7 (357-400)||(15074235-15074278)
chr7 (357-400)||(18105396-18105439)
chr7 (357-400)||(20564096-20564139)
chr7 (357-400)||(45767868-45767911)
chr7 (357-399)||(10097939-10097981)
chr7 (37-103)||(19801695-19801761)
chr7 (334-396)||(40140739-40140801)
chr7 (21-106)||(15071070-15071155)
chr7 (18-103)||(16488549-16488634)
chr7 (368-420)||(16674786-16674838)
chr7 (368-420)||(17649154-17649206)
chr7 (357-400)||(15070378-15070421)
chr7 (388-469)||(25195947-25196025)
chr7 (388-469)||(29097884-29097962)
chr7 (357-400)||(30791015-30791058)
chr7 (357-400)||(41884133-41884176)
chr7 (425-501)||(47521351-47521429)
chr7 (358-396)||(7975620-7975658)
chr7 (358-400)||(17834511-17834553)
chr7 (388-466)||(27657009-27657087)
chr7 (21-82)||(9368213-9368274)
chr7 (420-469)||(12081249-12081298)
chr7 (322-387)||(16488883-16488947)
chr7 (21-82)||(34741897-34741958)
chr7 (21-82)||(35607202-35607263)
chr7 (21-82)||(41883725-41883786)
chr7 (21-82)||(48406543-48406604)
[»] chr8 (51 HSPs)
chr8 (110-382)||(5300772-5301070)
chr8 (172-409)||(45133070-45133318)
chr8 (18-107)||(34819402-34819491)
chr8 (18-107)||(40075492-40075581)
chr8 (18-100)||(5301118-5301200)
chr8 (369-500)||(20859609-20859742)
chr8 (18-103)||(30761068-30761153)
chr8 (18-107)||(35554764-35554853)
chr8 (22-103)||(39831541-39831622)
chr8 (110-186)||(5680148-5680223)
chr8 (19-99)||(20859190-20859270)
chr8 (368-500)||(39491042-39491176)
chr8 (384-502)||(40075065-40075185)
chr8 (110-186)||(21176015-21176090)
chr8 (24-116)||(45132918-45133010)
chr8 (368-500)||(20854552-20854686)
chr8 (369-500)||(39831091-39831224)
chr8 (21-109)||(15033549-15033637)
chr8 (36-88)||(41239359-41239411)
chr8 (357-400)||(184559-184602)
chr8 (426-469)||(7120868-7120911)
chr8 (357-400)||(8419427-8419470)
chr8 (368-496)||(13782174-13782304)
chr8 (357-400)||(22014269-22014312)
chr8 (357-400)||(32375674-32375717)
chr8 (357-400)||(36677936-36677979)
chr8 (388-466)||(22550889-22550967)
chr8 (359-400)||(26663040-26663081)
chr8 (368-486)||(35551615-35551735)
chr8 (420-469)||(40745337-40745386)
chr8 (427-502)||(44885649-44885725)
chr8 (388-469)||(3695338-3695416)
chr8 (357-400)||(7344564-7344607)
chr8 (357-400)||(15030907-15030950)
chr8 (357-400)||(17924290-17924333)
chr8 (371-503)||(31745114-31745248)
chr8 (388-469)||(35645889-35645967)
chr8 (357-400)||(45066368-45066411)
chr8 (388-464)||(914693-914766)
chr8 (600-694)||(13904806-13904900)
chr8 (388-462)||(22547444-22547518)
chr8 (21-103)||(34367414-34367496)
chr8 (415-502)||(37328855-37328944)
chr8 (21-82)||(1055711-1055772)
chr8 (365-414)||(4866457-4866506)
chr8 (21-82)||(23019098-23019159)
chr8 (21-82)||(26662632-26662693)
chr8 (334-391)||(30755688-30755745)
chr8 (368-469)||(40740874-40740975)
chr8 (21-82)||(42482317-42482378)
chr8 (388-449)||(44727529-44727589)
[»] chr5 (42 HSPs)
chr5 (110-409)||(42539092-42539418)
chr5 (110-500)||(38971347-38971761)
chr5 (110-500)||(36503008-36503422)
chr5 (110-282)||(15939947-15940115)
chr5 (18-116)||(38971217-38971315)
chr5 (514-688)||(20888440-20888612)
chr5 (19-103)||(5199943-5200027)
chr5 (18-107)||(511414-511503)
chr5 (18-109)||(15939817-15939908)
chr5 (368-500)||(38408471-38408605)
chr5 (358-440)||(42937216-42937298)
chr5 (51-103)||(40622801-40622853)
chr5 (23-80)||(7761730-7761787)
chr5 (21-109)||(8447-8535)
chr5 (371-500)||(5200363-5200494)
chr5 (51-86)||(8699237-8699272)
chr5 (357-400)||(14280907-14280950)
chr5 (357-400)||(28238162-28238205)
chr5 (368-488)||(35564208-35564330)
chr5 (357-400)||(38855718-38855761)
chr5 (302-349)||(42937280-42937327)
chr5 (358-400)||(13837748-13837790)
chr5 (334-400)||(29430022-29430088)
chr5 (334-400)||(29430585-29430651)
chr5 (62-116)||(42539006-42539060)
chr5 (21-82)||(38407662-38407723)
chr5 (368-400)||(8577008-8577040)
chr5 (425-501)||(5196978-5197056)
chr5 (357-400)||(19041124-19041167)
chr5 (21-88)||(28879783-28879850)
chr5 (368-399)||(41798852-41798883)
chr5 (334-393)||(42098303-42098362)
chr5 (369-466)||(30705107-30705205)
chr5 (358-400)||(37814606-37814648)
chr5 (334-400)||(39742575-39742641)
chr5 (388-506)||(14687-14807)
chr5 (36-109)||(8577323-8577396)
chr5 (302-331)||(15940228-15940257)
chr5 (359-400)||(35926387-35926428)
chr5 (359-400)||(41201753-41201794)
chr5 (110-159)||(42937370-42937419)
chr5 (51-88)||(42937467-42937504)
[»] chr2 (41 HSPs)
chr2 (110-380)||(7417091-7417379)
chr2 (110-282)||(25514641-25514808)
chr2 (167-284)||(15546988-15547105)
chr2 (369-499)||(6637470-6637602)
chr2 (18-103)||(6637882-6637967)
chr2 (18-103)||(40538704-40538789)
chr2 (579-677)||(32760415-32760513)
chr2 (51-116)||(7416994-7417059)
chr2 (38-86)||(36653303-36653351)
chr2 (355-466)||(3086007-3086118)
chr2 (357-400)||(18000255-18000298)
chr2 (357-400)||(22003408-22003451)
chr2 (357-400)||(28468664-28468707)
chr2 (361-404)||(30273153-30273196)
chr2 (21-92)||(39950673-39950744)
chr2 (357-400)||(41564499-41564542)
chr2 (357-400)||(44100805-44100848)
chr2 (334-400)||(14456502-14456568)
chr2 (615-677)||(15063100-15063162)
chr2 (358-400)||(45475464-45475506)
chr2 (333-382)||(22443532-22443581)
chr2 (36-109)||(29398389-29398462)
chr2 (359-400)||(43536127-43536168)
chr2 (356-400)||(25184837-25184881)
chr2 (358-406)||(39947623-39947671)
chr2 (357-400)||(5351739-5351782)
chr2 (333-380)||(7417364-7417411)
chr2 (368-488)||(36652853-36652975)
chr2 (390-449)||(43258759-43258818)
chr2 (358-400)||(2917707-2917749)
chr2 (18-116)||(25514840-25514929)
chr2 (51-109)||(28471745-28471803)
chr2 (368-466)||(29401609-29401707)
chr2 (426-468)||(29601207-29601249)
chr2 (420-466)||(33002362-33002408)
chr2 (21-82)||(3938350-3938411)
chr2 (21-82)||(15834441-15834502)
chr2 (368-401)||(25964845-25964878)
chr2 (368-469)||(29406940-29407041)
chr2 (21-82)||(30493772-30493833)
chr2 (333-386)||(38340814-38340867)
[»] scaffold0110 (1 HSPs)
scaffold0110 (512-706)||(43989-44184)
[»] scaffold0155 (1 HSPs)
scaffold0155 (51-103)||(12562-12614)
[»] scaffold0238 (1 HSPs)
scaffold0238 (411-500)||(18932-19023)
[»] scaffold0744 (1 HSPs)
scaffold0744 (357-400)||(430-473)
[»] scaffold0494 (1 HSPs)
scaffold0494 (357-400)||(5354-5397)
[»] scaffold0573 (1 HSPs)
scaffold0573 (617-683)||(3844-3910)
[»] scaffold0038 (1 HSPs)
scaffold0038 (359-400)||(50072-50113)
[»] scaffold0014 (1 HSPs)
scaffold0014 (513-677)||(137087-137252)
[»] scaffold0618 (1 HSPs)
scaffold0618 (368-404)||(3919-3955)
[»] scaffold0283 (1 HSPs)
scaffold0283 (427-502)||(1676-1752)
[»] scaffold0011 (1 HSPs)
scaffold0011 (365-405)||(235930-235970)
[»] scaffold0293 (1 HSPs)
scaffold0293 (357-400)||(729-772)
[»] scaffold0101 (1 HSPs)
scaffold0101 (357-400)||(41029-41072)
[»] scaffold0199 (1 HSPs)
scaffold0199 (358-400)||(10676-10718)
[»] scaffold0180 (1 HSPs)
scaffold0180 (358-400)||(15629-15671)


Alignment Details
Target: chr6 (Bit Score: 945; Significance: 0; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 945; E-Value: 0
Query Start/End: Original strand, 18 - 1027
Target Start/End: Complemental strand, 24885514 - 24884503
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatattttc 117  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24885514 gttagggagcggatcgcaccgatcttgagcaggaggcgaggccagaggccgagaaggaggcaccagcagcatcagcaggaccaggagtagtaatattttc 24885415  T
Q  118 atgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885414 atgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatat 24885315  T
Q  218 tttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttctgccattttatg 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885314 tttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttctgccattttatg 24885215  T
Q  318 gcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcac 417  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24885214 gcttcaggacgccttggcagttaactaccgaagaaaaataaaaccggcgacagttaactgccgaggaaaacctcggtagttaattgcagccgtttttcac 24885115  T
Q  418 aaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc--aacctaaccaaatgtgtcagcaacaattctcattcatcaaagtgct 515  Q
    |||||| |||||||||||||| |||| |||||||||||||||| ||||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24885114 aaaattcggcagttatctgccaaagggcatttagataaattacccgtgtgtctcaacctaatcaaatgtgtcagcaacaattctcattcatcaaagtgct 24885015  T
Q  516 tcatccaccattttattcttacataattcgttaatgtgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacatatgt 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885014 tcatccaccattttattcttacataattcgttaatgtgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacatatgt 24884915  T
Q  616 ggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataacatattgggat 715  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24884914 ggccttgttcacttctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataacatattgggat 24884815  T
Q  716 caagttggcctcaaacgtataaattaaaaacggaaaccttattagaaatacaacttattaatttgtttctgcatttcctattgacaaataaaattctaat 815  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24884814 caagttggtatcaaacgtataaattaaaaacggaaaccttattagaaatacaacttattaatttgtttctgcatttcctattgacaaataaaattctaat 24884715  T
Q  816 gatgtgtccttcctttttgttgtttacatccttttctgtctcaacatgttgagaatttagttgggagtcaggatatacatcttacaagcatgtgaatcta 915  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24884714 gatgtgtccttcctttttgttgtttacatccttttctgtctcaacatgttgagaatttagttgggagtcaggatatacatcttacaagcatgtgaatcta 24884615  T
Q  916 attcagcagatatatctcccgacacttttgattgtgttgaatgctgcaaagttcatcataaatagtcaaaaacacaacattataggtatctttatccttt 1015  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24884614 attcagcagatatatctcccgacacttttgattgtgttgaatgctgcaaagttcatcataaatagtcaaaaacacaacattataggtatctttatccttt 24884515  T
Q  1016 aactctctgctt 1027  Q
    ||||||||||||    
T  24884514 aactctctgctt 24884503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 110 - 361
Target Start/End: Original strand, 2407524 - 2407786
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||    
T  2407524 atattttcataacattttgttcgttccgttgtattttaatgacatttgttactttgttggtatttcgatgacatatttttataacaattgttcgttttcg 2407623  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaa-----------acaatgtgtaaaaacacatgtaa 298  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||    
T  2407624 tatcatattttcaattttaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtttacaatgtgtaaaaacacatgtaa 2407723  T
Q  299 caagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaac 361  Q
    || ||||||||||||||||||||||||| |||| | || ||||||||| | ||||||||||||    
T  2407724 caggttctgccattttatggcttcaggaagcctcgacaattaactaccaaggaaaaatgaaac 2407786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 110 - 278
Target Start/End: Complemental strand, 2405802 - 2405634
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||    
T  2405802 atattttcatgacattttattcgttccgttgtattttcatgacatttgttactttgttggtatttcgatgacatatttttatgataattattggtttccg 2405703  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaaca 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2405702 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaaca 2405634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 513 - 706
Target Start/End: Original strand, 29953815 - 29954009
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    ||||||| |||||||||||||||||||||| |||||||  ||| ||||||||| ||||  | |||| ||||||| ||| |||||||||||||||||| ||    
T  29953815 gcttcattcaccattttattcttacataatccgttaatcatgacattgtagctatgaagttcaggagtcactcccctttgagcaatagtgttgaatatat 29953914  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    ||||||||||||| | ||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  29953915 atgtggccttgttgacttctttaactaggaaatacccatccatcaaagaagtataagtaacaacattaggttccacaccttgttttatcataaca 29954009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 513 - 706
Target Start/End: Complemental strand, 24942078 - 24941884
Alignment:
Q  513 gcttcatccaccattttattcttacataattc-gttaatgtgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||||||||||||||| | ||||   ||| | ||||||| |||| || ||||  |||||| ||| |||| ||||||||||||||||    
T  24942078 gcttcatccaccattttattcttacataatccagttatcatgacactgtagctatgaagattaggagccactcctctttgagccatagtgttgaatacat 24941979  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    |||||||| |||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  24941978 atgtggccctgttcacttctttaaccaagaaacacccatccatcaaagaagtataagtaacaacattaggttccacaccttgttttatcataaca 24941884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 513 - 706
Target Start/End: Complemental strand, 30053305 - 30053111
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||||||||||||||| | |||||  ||| | ||||||| ||||||| |||| ||||||| ||| ||| |||||||||||||||||    
T  30053305 gcttcatccaccattttattcttacataatccattaatcatgacaatgtagctatgaacattaggagtcactccccttagagaaatagtgttgaatacat 30053206  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
     | |||||||||| | |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  30053205 gtttggccttgttgacttcttttaccaagaaatacccatccatcaaagaagtataagtaacaacattaggttccacgccttgttttatcataaca 30053111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 513 - 706
Target Start/End: Complemental strand, 30149405 - 30149211
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||||||   ||||| |||| ||||||| ||| ||| ||  |||||||||| ||    
T  30149405 gcttcatccaccattttattcttacataatccgttaatcatgatattgtagctaaaaacattaggagtcactccccttagagaaagggtgttgaatagat 30149306  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
     | |||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||  |||| |||||||||||    
T  30149305 gtttggccttgttgacttctttaaccaagaaataaccatccattaaagaactataagtaacaatatcaggttccacacgttgttttatcataaca 30149211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 513 - 706
Target Start/End: Original strand, 29950018 - 29950212
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    ||||||| |||||||||||||||||||||| |||||||  |||||||||||||   ||||| |||| ||||||| ||| ||| ||  |||||||||| ||    
T  29950018 gcttcattcaccattttattcttacataatccgttaatcatgatattgtagctaaaaacattaggagtcactccccttagaggaagggtgttgaatagat 29950117  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
     | |||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||  |||| |||||||||||    
T  29950118 gtttggccttgttgacttctttaaccaagaaataaccatccattaaagaactataagtaacaatatcaggttccacacgttgttttatcataaca 29950212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 513 - 706
Target Start/End: Complemental strand, 30154378 - 30154184
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    ||||||||||||||||||  |||||||||| | |||||  ||| | |||||||  |||||| |||| ||||||| ||||||||||  || | ||||||||    
T  30154378 gcttcatccaccattttaaccttacataatccattaatcatgacactgtagctacgaacattaggagtcactccccttcgagcaagtgtatcgaatacat 30154279  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    |||||||||| |||| |||||||||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||  |||| |||||||||||    
T  30154278 atgtggccttattcacttctttaaccaagaaatacccatccatcaaagaattataagtaacaacatcaggttccacatgttgttttatcataaca 30154184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 513 - 706
Target Start/End: Complemental strand, 24934545 - 24934351
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||| |||| |||| | | |||||  | ||| ||||||||||||||| |||| ||||||| |||| ||| ||||||||||| |||     
T  24934545 gcttcatccaccattttagtcttgcatagtccattaatcataatactgtagctttgaacatcaggagtcactccccttctagccatagtgttgaacacaa 24934446  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    |||||||||| |||  || ||| ||||||||||| ||||||||||||||| |||||||||||| |||||  |||||| ||||| |||||||||||    
T  24934445 atgtggccttattctcttgtttgaccaagaaatacccatccattaaagaattataagtaacaatattagaatccacaccttgttttatcataaca 24934351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 513 - 704
Target Start/End: Original strand, 21160746 - 21160938
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||||||||||||| | | |||||  ||| | | ||||| ||||||| || | ||||||| |||| | | ||||||||||| |||     
T  21160746 gcttcatccaccattttattcttacatagtccattaatcatgacagtatagctatgaacattagaagtcactccccttctaaccatagtgttgaacacaa 21160845  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataa 704  Q
    |||||||||| |||| |||||| ||||||||||| |||||||| ||| || ||||||||||||||||| |||||||  ||||| |||||||||    
T  21160846 atgtggccttattcacttctttgaccaagaaatacccatccatcaaaaaactataagtaacaacattaagttccacgccttgttttatcataa 21160938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 513 - 706
Target Start/End: Original strand, 24739316 - 24739510
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||| ||||||||| | | |||||  ||| | | ||||| ||||||| |||| ||||||| |||| ||| ||||||||||| |||     
T  24739316 gcttcatccaccattttagtcttacatagtccattaatcatgacactatagctatgaacatcaggagtcactccccttctagccatagtgttgaacacaa 24739415  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    |||||||||| |||  || ||| ||||||||||| |||||||| |||||| |||||||||  |||| ||| ||||||  |||| |||||||||||    
T  24739416 atgtggccttattctcttgtttgaccaagaaatacccatccatcaaagaattataagtaatgacatcaggatccacactttgttttatcataaca 24739510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 558 - 684
Target Start/End: Complemental strand, 30132542 - 30132417
Alignment:
Q  558 tgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacatatgtggccttgttcaattctttaaccaagaaataaccatccattaa 657  Q
    ||||||| ||||||| |||||||| ||| ||| |||  ||||| |||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  30132542 tgtagctctgaacatcaggaatcattcccctttgaggcatagttttgaata--tatgtggccatgttcacttctttaaccaagaaataaccatccattaa 30132445  T
Q  658 agaagta-taagtaacaacattaggttc 684  Q
    |||| || ||||||||||||||| ||||    
T  30132444 agaactattaagtaacaacattaagttc 30132417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 2405932 - 2405834
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||| ||||| |||| | |||||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||    
T  2405932 gttacggagcagatcgcgccgatcttgaccaggaggcgaggctagaggccgaggaggaggcaccagcaacatcagcaggaccaggaccagtagtatttt 2405834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 513 - 706
Target Start/End: Original strand, 30577889 - 30578083
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    ||||||||||||||||||  ||||| |||| | |||||  | |||||||||||  ||| || |  | |||||||  || |||| |||| |||||||| ||    
T  30577889 gcttcatccaccattttagccttacttaatccattaatcattatattgtagctacgaagatcaatagtcactccgttttgagccatagcgttgaatatat 30577988  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    || | |||||||||  || ||||||||||||||| ||||| ||||||||| || |||||||||||| ||||| ||||  |||| |||||||||||    
T  30577989 atctagccttgttcgcttttttaaccaagaaatacccatctattaaagaactacaagtaacaacatcaggtttcacactttgttttatcataaca 30578083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 2407419 - 2407488
Alignment:
Q  37 cgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagta 106  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  2407419 cgatcttgaccaggaggcgaggccagagtccgaggaggaggcactagcagcatcagcaggaccagtagta 2407488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 3502165 - 3502249
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||||| || ||||||| ||| ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||    
T  3502165 ttagggagcagatcacgcctatcttgaccaggaggcgaggccagaggccgaggaggaagcaccaacaacatcaacaggactagga 3502249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 24085669 - 24085617
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  24085669 aggcgaggccagaggccgaggaggagccaccagcaacatcagcaggaccagga 24085617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 595 - 687
Target Start/End: Complemental strand, 30134947 - 30134855
Alignment:
Q  595 aatagtgttgaatacatatgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccac 687  Q
    ||||||||||||||||||| |  |  | | || |||||||||||||||||| | |||||||||| || |||||||||||||||||||||||||    
T  30134947 aatagtgttgaatacatatttctctctatccacttctttaaccaagaaatatctatccattaaaaaactataagtaacaacattaggttccac 30134855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 24719981 - 24719875
Alignment:
Q  397 ttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgtttcaacctaaccaaatgtgtcagcaaca 494  Q
    |||| |||||||| ||| |||||| || |||||||| |||||||||||||||||| ||||||| ||  |||| ||| ||||| ||||||||||| |||||    
T  24719981 ttaactgcagccgatttccacaaacttcggcagttaactgccgaaggacatttaggtaaattagtcgtgtgtctcagcctaatcaaatgtgtcaacaaca 24719882  T
Q  495 attctca 501  Q
    || ||||    
T  24719881 atcctca 24719875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 15863463 - 15863536
Alignment:
Q  113 ttttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatattt 187  Q
    |||||||||||||| ||||||||| ||  ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  15863463 ttttcatgacattt-gttcgttcctttctattttcatgacatttgttagtttctttgtattttgatgacatattt 15863536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 31771239 - 31771308
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||||| |||||| ||||| |||| ||| ||||||||||||||||||||||||||||| || |||||    
T  31771239 ttagggagcagatcacgccgattttgaccaggaggcgaggccagaggccgaggaggaggcaacatcagca 31771308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 26173097 - 26173177
Alignment:
Q  23 ggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||| |||| | |||||||||| ||  ||||||||| ||||||||||||| |||||||||||||||||  ||||||||||    
T  26173097 ggagcagatcgcgccgatcttgatcatgaggcgaggctagaggccgaggagaaggcaccagcagcatcaataggaccagga 26173177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 32643103 - 32643155
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  32643103 aggcgaggctagaggctgaggaggaggcaccagcagcaccagcaggaccagga 32643155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 27616738 - 27616781
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  27616738 gaaaccggcggcagttaactgccgaagaaaacctcggtagttaa 27616781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 890 - 965
Target Start/End: Original strand, 32599771 - 32599846
Alignment:
Q  890 atacatcttacaagcatgtgaatctaattcagcagatatatctcccgacacttttgattgtgttgaatgctgcaaa 965  Q
    |||||||||||| |||||||||||||| |||||||| || || ||||| ||  ||||||||||||| |||||||||    
T  32599771 atacatcttacaggcatgtgaatctaactcagcagagatttcacccgaaaccattgattgtgttgagtgctgcaaa 32599846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 469
Target Start/End: Original strand, 3385007 - 3385107
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaagga-catttagataaattactcgtgtt 467  Q
    ||||||||||||| ||||||||||| |||||| | || ||| |||  ||||||||||||||||  ||||| |||||  |||||| |||||||||||||||    
T  3385007 agttaactgccgacgaaaacctcgggagttaactacaaccgatttcgacaaaatttggcagttgactgcc-aaggagtatttaggtaaattactcgtgtt 3385105  T
Q  468 tc 469  Q
    ||    
T  3385106 tc 3385107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 513 - 677
Target Start/End: Complemental strand, 24730733 - 24730568
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||| ||||||||||| | |||||  || |  | ||||| ||||||| || ||| ||||| |||   || ||| | | ||||| ||    
T  24730733 gcttcatccaccattttaatcttacataatccattaatcatggtggtatagctctgaacattagcaatgactccccttgaggccatactatcgaatatat 24730634  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacat 677  Q
     | |||||||||| | ||||||||| ||| |||| ||||||||||||||  |||||||||||||||    
T  24730633 ctttggccttgttaatttctttaactaagcaatatccatccattaaagagttataagtaacaacat 24730568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 18001653 - 18001601
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||  |||||||||||||||||||||| || |||||||||||||||||    
T  18001653 aggcgaggttagaggccgaggaggaggcaccaacaacatcagcaggaccagga 18001601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 13382652 - 13382695
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  13382652 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 13382695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 26712273 - 26712230
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  26712273 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 26712230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 617 - 683
Target Start/End: Original strand, 28926773 - 28926839
Alignment:
Q  617 gccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggtt 683  Q
    |||||||||| ||||||||| | | |||| ||||||||||||||  ||||||||||||| |||||||    
T  28926773 gccttgttcacttctttaacaaggcaatatccatccattaaagagctataagtaacaacgttaggtt 28926839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 513 - 550
Target Start/End: Complemental strand, 24897955 - 24897918
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaat 550  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24897955 gcttcatccaccattttattcttacataatccgttaat 24897918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 27638933 - 27639018
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagta 106  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||  | ||||||||| ||||    
T  27638933 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagta 27639018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 28249910 - 28249951
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  28249910 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 28249951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 2405628 - 2405573
Alignment:
Q  299 caagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaa 354  Q
    |||||||||| ||||||||||||||||| ||||  ||||||||||| ||| |||||    
T  2405628 caagttctgctattttatggcttcaggaagcctcagcagttaactatcgaggaaaa 2405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 18351693 - 18351650
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| | |||||||||||||| ||||||||||||||||||    
T  18351693 gaaaccggtggcagttaactgccgaggaaaacctcggtagttaa 18351650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 22304415 - 22304482
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||    
T  22304415 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagca 22304482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 26712071 - 26712114
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||    
T  26712071 gaaatcggcggcagttaactgccgaggaaaacctcggtagttaa 26712114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 600 - 694
Target Start/End: Original strand, 15715195 - 15715289
Alignment:
Q  600 tgttgaatacatatgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgt 694  Q
    ||||||||||||   |||||||||||| ||  ||||| ||| |||| ||||||||||  |||||||| ||||||||||  ||| ||||| |||||    
T  15715195 tgttgaatacatgcttggccttgttcacttgattaactaagcaatacccatccattagtgaagtatatgtaacaacatcgggtaccacaccttgt 15715289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 17596941 - 17597007
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||||  ||| ||||||| ||||||||  |||||||||||||| ||||| ||||| ||||||    
T  17596941 gcagttaactgtcgaggaaaaataaaaccggctgcagttaactgccgaggaaaatctcggcagttaa 17597007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 26351145 - 26351103
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||    
T  26351145 aaaccggcggcagttaactgccgaggaaaacctcgggagttaa 26351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 617 - 683
Target Start/End: Complemental strand, 29099116 - 29099050
Alignment:
Q  617 gccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggtt 683  Q
    ||||| |||| ||||||||| | | |||| ||||||||||||||  |||||||||||| ||||||||    
T  29099116 gccttattcacttctttaactaggcaatatccatccattaaagagttataagtaacaaaattaggtt 29099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 617 - 683
Target Start/End: Complemental strand, 29116034 - 29115968
Alignment:
Q  617 gccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggtt 683  Q
    ||||| |||| ||||||||| | | |||| ||||||||||||||  |||||||||||| ||||||||    
T  29116034 gccttattcacttctttaactaggcaatatccatccattaaagagttataagtaacaaaattaggtt 29115968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 617 - 683
Target Start/End: Complemental strand, 29897850 - 29897784
Alignment:
Q  617 gccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggtt 683  Q
    ||||| |||| ||||||||| | | |||| ||||||||||||||  ||||||||| |||||||||||    
T  29897850 gccttattcacttctttaactaggcaatatccatccattaaagagttataagtaaaaacattaggtt 29897784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 679
Target Start/End: Complemental strand, 30028887 - 30028849
Alignment:
Q  641 aaataaccatccattaaagaagtataagtaacaacatta 679  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  30028887 aaatacccatccattaaagaactataagtaacaacatta 30028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 2405505 - 2405550
Alignment:
Q  333 ggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgc 378  Q
    |||||||| |||| ||||||||||||||||| || |||||||||||    
T  2405505 ggcagttagctactgaagaaaaatgaaaccgacggcagttaactgc 2405550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 6204334 - 6204395
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  6204334 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 6204395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 9048124 - 9048063
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacattt 449  Q
    ||||||||||||| |||||||| ||||  |||| || |||||||| |||||||||| |||||    
T  9048124 cctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaagggcattt 9048063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 11691301 - 11691362
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  11691301 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 11691362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 30826490 - 30826429
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  30826490 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 30826429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 676
Target Start/End: Original strand, 31000162 - 31000223
Alignment:
Q  615 tggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaaca 676  Q
    |||||||||||| ||| |||| |||  |||| ||||||||||||||  ||||||||||||||    
T  31000162 tggccttgttcacttcgttaatcaaacaatatccatccattaaagagctataagtaacaaca 31000223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32641739 - 32641674
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccag 83  Q
    |||||| ||| |||| | |||||| | | ||| |||||||||||||| ||||||||||||||||||    
T  32641739 gttaggcagcagatcgcgccgatcattaccaggaggcgaggccagagaccgaggaggaggcaccag 32641674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 110 - 405
Target Start/End: Original strand, 51686414 - 51686724
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51686414 atattttcatgacattttgttcgttccgttgtattttcatgacatttgttactttgttggtatttcgatgacatatttttatgacaattgttcgtttccg 51686513  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttc---- 305  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        
T  51686514 tatcatattttcaatttcaataatgttggtaattttctttgattgactttatgatttggcattgagacaatgtgtaaaaacacatgtaacaagttctgtc 51686613  T
Q  306 -----------tgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggt 394  Q
               |||||||||||||||||||||||||| | |||||||||| |||  |||||| |||||| ||||||||||||||||| ||||||||| |     
T  51686614 tcaagagattatgccattttatggcttcaggacgcctcgacagttaactatcgagaaaaaataaaaccgacgacagttaactgccgatgaaaacctctgc 51686713  T
Q  395 agttaattgca 405  Q
    |||||| ||||    
T  51686714 agttaaatgca 51686724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 110 - 350
Target Start/End: Complemental strand, 41930810 - 41930574
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    |||||||||||| |||| |  |||| ||||| ||||||||||||||||||  ||  |||||  ||||||||||||| |||||||||||||||| ||||||    
T  41930810 atattttcatgatatttggc-cgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcgatgacatatatttatgacaattgttcatttccg 41930715  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttctgcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  41930714 tatcatattttcaatttcaattatgttggtaattttctttgattggctttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaggttatgcc 41930615  T
Q  310 attttatggcttcaggacgccttggcagttaactaccgaag 350  Q
    ||||||||||||||||| |||| |||| |||||||||||||    
T  41930614 attttatggcttcaggatgcctcggcaattaactaccgaag 41930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 110 - 285
Target Start/End: Original strand, 50904627 - 50904800
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50904627 atattttcatgacattttgttcgttctgttgtatattcatgacatttgttactttgttggtatttcgatgacatatttttatgacaattgttcgtttccg 50904726  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgta 285  Q
    |||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||| |||||||||||||||||    
T  50904727 tatcatattttcaatttcaattatgttggtaaatt--ttttattgactttatgatttgacattgaaacaatgtgta 50904800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 513 - 706
Target Start/End: Original strand, 44262714 - 44262908
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    ||||||||||||||||| |||||||| ||| | |||||  | | | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  44262714 gcttcatccaccatttttttcttacacaatccattaatcataacactgtagctttgaacactaggaatcactccacttcgagcaatagtgttgaatacat 44262813  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||| || || ||| |||||| ||||| |||||||||||    
T  44262814 atgtggccttgttcacttctttaaccaagaaatacccatccatcaaagaaatataagtaaaaatatcaggatccacaccttgttttatcataaca 44262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 30708258 - 30708370
Alignment:
Q  172 tttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcat 271  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30708258 tttcgatgacatatatttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttgacat 30708357  T
Q  272 tgaaacaatgtgt 284  Q
    |||||||||||||    
T  30708358 tgaaacaatgtgt 30708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 369 - 502
Target Start/End: Original strand, 8111420 - 8111555
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtg--t 466  Q
    ||||||||||||| |||| ||||||||||||| |||||||| ||| |||||| || | || ||| ||||||| ||||||||||||||||||||||||  |    
T  8111420 agttaactgccgaggaaatcctcggtagttaactgcagccggtttccacaaacttcgacaattaactgccgatggacatttagataaattactcgtgtat 8111519  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattctcat 502  Q
     ||| || |||||||||||||| |||||||||||||    
T  8111520 ctcagccaaaccaaatgtgtcaacaacaattctcat 8111555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 368 - 500
Target Start/End: Original strand, 9013873 - 9014007
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| |||||||||| ||||||| |||||||| ||  ||||||||| |||||||| ||||||||||  |||||| ||||||||||  |||    
T  9013873 cagttaactgccgaggaaaacctcgatagttaactgcagccggttgccacaaaattcggcagttaactgccgaagggaatttaggtaaattactcgtgtg 9013972  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||| ||||||||||||||||| || ||||||||    
T  9013973 tctcagcctaaccaaatgtgtcaacagcaattctc 9014007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 12892256 - 12892373
Alignment:
Q  167 ttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgattt 266  Q
    |||||||| |||||||||||| ||||||||||| | |||  ||||||| ||||||||||| |||||||||||||||||   || ||| | ||||||||||    
T  12892256 ttgtattttgatgacatatttctatgacaattgctggttctcgtatcaaattttcaatttaaattatgttggtaatttctgtttattaaatttatgattt 12892355  T
Q  267 ggcattgaaacaatgtgt 284  Q
    ||||||||||||||||||    
T  12892356 ggcattgaaacaatgtgt 12892373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 371 - 497
Target Start/End: Complemental strand, 30704084 - 30703956
Alignment:
Q  371 ttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgttt 468  Q
    ||||||||||| |||||||| ||||||||| |||||||| ||| |||||||||||||||||| |||||||| | ||||||  ||||||||||  |||| |    
T  30704084 ttaactgccgaggaaaaccttggtagttaactgcagccggtttccacaaaatttggcagttaactgccgaatggcatttaagtaaattactcgtgtgtct 30703985  T
Q  469 caacctaaccaaatgtgtcagcaacaatt 497  Q
    || ||||||||||||||||| || |||||    
T  30703984 cagcctaaccaaatgtgtcaacatcaatt 30703956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 8110327 - 8110412
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||| |||| | ||||| |||  ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8110327 gttagggagcagatcgcgccgatattggccaggaggggaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 8110412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 51686290 - 51686378
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagta 106  Q
    |||||||||| |||| | |||||||||| ||  |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  51686290 gttagggagcagatcgcgccgatcttgaccatgaggcgaggccagaggccgaggaggaggcaccaacaacatcagcaggaccagtagta 51686378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50196507 - 50196588
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 100  Q
    ||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||||||| || || ||||||||||||||    
T  50196507 ttagggagcagatcgcaccgatcttgaccaggaggtgaggccagaggccgaggaggaggcatcaacaacatcagcaggacca 50196588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 41930940 - 41930842
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||||| |||| | | ||| |||  ||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| || ||||||    
T  41930940 gttagggagcagatcgcgctgatattggccaggaggcgaggccagaggtcaaggaggcggcaccagcagcatcagcaggaccaggagtaatagtatttt 41930842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 40886308 - 40886235
Alignment:
Q  167 ttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggta 240  Q
    |||||||||||||| |||||| ||||||| ||||| |||| ||||||||||||||||||| ||| |||||||||    
T  40886308 ttgtatttcgatgaaatatttctatgacatttgttggttttcgtatcatattttcaatttaaatgatgttggta 40886235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 50020561 - 50020497
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 100  Q
    |||||||||| ||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  50020561 ccgatcttgaccaggaggcgaggccaaaggctgaggaggaggcaccagaagcatcagcaggacca 50020497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 37016476 - 37016394
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||| |||| | ||||| ||||  ||||||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  37016476 agggagcagatcgcgccgattttgactagaaggcgaggccagaggccgaggaggaggcaccatcagcaggaccaggaccagga 37016394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 368 - 462
Target Start/End: Original strand, 44680078 - 44680172
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc 462  Q
    |||||||||||||| |||| ||||||||||||| ||| |||| ||| |  ||| || |||||||| ||| |||||||||||||| ||||||||||    
T  44680078 cagttaactgccgaggaaatcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgtcgaaggacatttaggtaaattactc 44680172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 50023551 - 50023649
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||||||| ||| |||| ||||| || |||| |||||||| |||||  ||| ||||||||||| ||||||| || ||||||||||||||||| ||||    
T  50023551 cagttaactgtcgaggaaatcctcgataattaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgt 50023649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 50030669 - 50030767
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||||||| ||| |||| ||||| || |||| |||||||| |||||  ||| ||||||||||| ||||||| || ||||||||||||||||| ||||    
T  50030669 cagttaactgtcgaggaaatcctcgataattaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgt 50030767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 14317785 - 14317865
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggac 98  Q
    ||||| |||| |||| | ||||| |||  ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  14317785 gttagagagcagatcgcgccgatgttggccaggaggcgaggccagaggacgaggaggaggcaccagcagcatcaacaggac 14317865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 21018464 - 21018376
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||| | ||||| |||| ||| ||||||| |||||||||||||||||||||||| |||||  | ||||||||| |||||||    
T  21018464 agggagcagatcgcgccgattttgaccaggaggcgagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagtagta 21018376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 50020186 - 50020056
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||| |||||||| |||| ||||| ||||||| |||| ||| |||||  ||| || |||||||| || || |||| ||||||||||||||||||||||     
T  50020186 cagtttactgccgaggaaatcctcgatagttaactgcaaccgattttctaaaacttcggcagttaactaccaaagggcatttagataaattactcgtgtg 50020087  T
Q  468 tc--aacctaaccaaatgtgtcagcaacaat 496  Q
    ||  |  | |||||||||||||| |||||||    
T  50020086 tctcattcaaaccaaatgtgtcaacaacaat 50020056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 46439237 - 46439278
Alignment:
Q  66 ccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  46439237 ccgaggaggaggcaccagcagtatcagcaggaccaggagtag 46439278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 72142 - 72198
Alignment:
Q  47 cagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||    
T  72142 cagaaggcaaggctagaggctgaggaggaggcactagcagcatcagctggaccagga 72198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 12892100 - 12892168
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggag 104  Q
    ||||| |||| ||| |||||||||||||||||||||||| |||| ||||||||| |||| || ||||||    
T  12892100 ccgatattgaccaggaggcgaggccagaggccgaggaggcggcaacagcagcatgagcatgagcaggag 12892168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 13624378 - 13624326
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||    
T  13624378 aggcgaggccagatgccgaggaggaggcaccaacagcaccagcaggactagga 13624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 38368277 - 38368202
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||| |||||| |||||||| |||   || |||| |||||||| |||||||||||||||| ||||||||||||||||    
T  38368277 cctcggcagttaactgcagccggttt---cataattcggcagttaactgccgaaggacatttggataaattactcgtgt 38368202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 37563330 - 37563287
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  37563330 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 37563287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 388 - 500
Target Start/End: Original strand, 40061185 - 40061299
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgtttcaacctaaccaaatgtg 485  Q
    ||||||||||||| |||| ||| |||||  ||| || ||| |||| ||||||| || ||||||| ||||||||||  |||| ||| || |||||||| ||    
T  40061185 cctcggtagttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtgtctcagccaaaccaaatatg 40061284  T
Q  486 tcagcaacaattctc 500  Q
    ||| |||||||||||    
T  40061285 tcaacaacaattctc 40061299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 40358330 - 40358287
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  40358330 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 40358287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 41800987 - 41800944
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  41800987 gaaaccggcggcagttagctgccgaagaaaacctcggtagttaa 41800944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 49563863 - 49563906
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  49563863 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 49563906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 50278333 - 50278400
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||| |||| ||| ||||| |||||||||||||||||||||||||| |||||  | |||||||||||    
T  50278333 ccgattttgaccaggaggcggggccagaggccgaggaggaggcaccatcagcaagaccaggaccagga 50278400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 54634065 - 54634022
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  54634065 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 54634022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 404
Target Start/End: Complemental strand, 29700350 - 29700305
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaattgc 404  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  29700350 aaccggctgcagttaactgccgaggaaaacctcggtagttaattgc 29700305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 30723613 - 30723528
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagta 106  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||  | ||||||||| ||||    
T  30723613 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagta 30723528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 31424925 - 31424986
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||||| ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  31424925 agggagcagatcacgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 31424986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 31425366 - 31425325
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  31425366 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 31425325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 44674717 - 44674656
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| ||||  || ||||||||||||||||||||||||||||||||    
T  44674717 agggagcagatcgcgccgattttgactaggaggcgaggccagaggccgaggaggaggcacca 44674656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 21018068 - 21018100
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||||||||||||||||||||||||||    
T  21018068 cagttaactgccgaagaaaacctcggtagttaa 21018100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 40354639 - 40354671
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||||||||||||||||||||||||||    
T  40354639 cagttaactgccgaagaaaacctcggtagttaa 40354671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 41933693 - 41933629
Alignment:
Q  336 agttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||| | |||| ||||||||||||||||  ||||||||| ||||  |||||||||||||||||    
T  41933693 agttaagtgccgaggaaaaatgaaaccggctgcagttaactaccgagaaaaacctcggtagttaa 41933629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 401
Target Start/End: Original strand, 54633835 - 54633879
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaat 401  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||    
T  54633835 gaaaccggcggcagttaactgccgaggaaaacttcggtagttaat 54633879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 1089634 - 1089591
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||    
T  1089634 gaaaccggcggcagttaaatgccgaggaaaacctcggtagttaa 1089591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 406
Target Start/End: Original strand, 20208535 - 20208582
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaattgcag 406  Q
    |||||||  |||||||||||||| |||||||||||||||||| |||||    
T  20208535 aaccggctgcagttaactgccgaggaaaacctcggtagttaactgcag 20208582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 30726791 - 30726748
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||  |||||||||||||| ||||||||||||||||||    
T  30726791 gaaaccggcagcagttaactgccgaggaaaacctcggtagttaa 30726748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 37563088 - 37563131
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| || ||||||||||| ||||||||||||||||||    
T  37563088 gaaaccggcggcaattaactgccgaggaaaacctcggtagttaa 37563131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 39773427 - 39773470
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||  |||||||||||||| ||||||||||||||||||    
T  39773427 gaaaccggcagcagttaactgccgaggaaaacctcggtagttaa 39773470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 49169147 - 49169104
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||    
T  49169147 gaaaccggcggcagttaactgccgaggaatacctcggtagttaa 49169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 52529236 - 52529279
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||    
T  52529236 gaaatcggcggcagttaactgccgaggaaaacctcggtagttaa 52529279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 3408288 - 3408250
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagt 397  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  3408288 aaccggcggcagttaactgccgaggaaaacctcggtagt 3408250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 7485685 - 7485763
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||| |||||||||||||||| ||||  ||| || | |||||| ||||||| || ||||| | ||||||||||||||    
T  7485685 cctcggcagttaattgcagccgtatttctaaaacttcgacagttaactgccgaggggcatttgggtaaattactcgtgt 7485763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 11494567 - 11494609
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||  |||||||||||||| ||||||||||||||||||    
T  11494567 aaaccggctgcagttaactgccgaggaaaacctcggtagttaa 11494609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 420 - 501
Target Start/End: Original strand, 11566858 - 11566940
Alignment:
Q  420 aatttggcagttatctgccgaaggacatttagataaattactcgtgttt-caacctaaccaaatgtgtcagcaacaattctca 501  Q
    |||| |||||||| ||||||| |||||||||| ||||||||| |||||| ||||| |    ||||||||| ||||||||||||    
T  11566858 aattcggcagttaactgccgatggacatttaggtaaattactagtgttttcaaccaatgacaatgtgtcaacaacaattctca 11566940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 26792293 - 26792251
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||    
T  26792293 aaaccggcggcagttaactgccgaggaaaatctcggtagttaa 26792251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 28234440 - 28234482
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||    
T  28234440 aaaccggcggcagttaaatgccgaggaaaacctcggtagttaa 28234482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 496
Target Start/End: Original strand, 37856805 - 37856878
Alignment:
Q  425 ggcagttatctgccgaaggacatttagataaattactcgtgtttc--aacctaaccaaatgtgtcagcaacaat 496  Q
    |||||||| ||||| ||||| |||||| |||||||||||||||||  | || |||||||||||| | |||||||    
T  37856805 ggcagttaactgccaaaggatatttaggtaaattactcgtgtttcttagccaaaccaaatgtgtgaacaacaat 37856878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 500
Target Start/End: Original strand, 50196915 - 50197048
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgttt 468  Q
    ||||||||| ||| |||| | ||||||||||| ||||| |  |||||  ||| || || ||||| ||||||| || ||||||| ||||||| |||||| |    
T  50196915 agttaactgtcgaggaaatcatcggtagttaactgcagtcaattttctaaaacttcggtagttaactgccgaggggcatttaggtaaattattcgtgtgt 50197014  T
Q  469 c--aacctaaccaaatgtgtcagcaacaattctc 500  Q
    |  | || || ||||||||||| |||||||||||    
T  50197015 cttagccaaatcaaatgtgtcaacaacaattctc 50197048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 51037492 - 51037570
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||| |||||||||||||||| ||||  ||| || |||||||| ||||||| ||||||||   ||| ||||||||||    
T  51037492 cctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgt 51037570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 56565781 - 56565823
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||    
T  56565781 aaaccggcggcagttaactgccgaggaaaacctcgggagttaa 56565823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 1306006 - 1305945
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  1306006 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 1305945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 3183993 - 3183952
Alignment:
Q  425 ggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||||| ||| ||||||||||||||||||| |||||||||    
T  3183993 ggcagttaactgtcgaaggacatttagataaaatactcgtgt 3183952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 6178676 - 6178615
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  6178676 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 6178615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 26932609 - 26932650
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||  ||||||||||||| ||||||||||||||||||    
T  26932609 aaccggcggtagttaactgccgaggaaaacctcggtagttaa 26932650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 2e-98; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 110 - 466
Target Start/End: Original strand, 11197165 - 11197528
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||| ||||||||| || | || ||||| ||||||||||||||||||  ||  |||||  ||||| || |||| |||||||||||||||| ||||||    
T  11197165 atatttttatgacatttggt-catttcgttgtattttcatgacatttgttg-ttactttgt--ttcgacgatatatatttatgacaattgttcatttccg 11197260  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaa-----------tgtgtaaaaacacatgtaa 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||    
T  11197261 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtttacaatgtgtaaaaacacatgtaa 11197360  T
Q  299 caagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagtt 398  Q
    || ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||    
T  11197361 caggttctgccattttatggcttcaggacgcctcagcagttaactaccgaggaaaaatgaaaccggcggcagttaactgccgaggaaaatctcgggagtt 11197460  T
Q  399 aattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    || |||||||| | | ||||||||| | |||||| |||||||| | ||||||| ||||||||||||||    
T  11197461 aactgcagccggtatccacaaaattcgacagttaactgccgaaaggcatttaggtaaattactcgtgt 11197528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 172 - 502
Target Start/End: Complemental strand, 38119851 - 38119514
Alignment:
Q  172 tttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcat 271  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||| ||||||||||||||||||||    
T  38119851 tttcgacgacatatatttatgacaattgttcgtttccgtatcatattttcaatt------atgttggtaattttctttggttgactttatgatttggcat 38119758  T
Q  272 tgaaacaatgtgt-----------aaaaacacatgtaacaagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaa 360  Q
    |||||||||||||           |||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  38119757 tgaaacaatgtgtttacaatgtgtaaaaacacatataacaggttctgccattttatggcttcaggacgcctcggcagttaactaccgaggaaaaatgaaa 38119658  T
Q  361 ccggcgacagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattac 460  Q
    |  ||| |||||||||||||| |||||||||||||||||| |||||||| | | ||||||||| | |||||| ||||| ||||  |||||||||||||||    
T  38119657 ctagcggcagttaactgccgaggaaaacctcggtagttaactgcagccggtatccacaaaattcgacagttaactgccaaagggtatttagataaattac 38119558  T
Q  461 tcgtgtttc--aacctaaccaaatgtgtcagcaacaattctcat 502  Q
    |||||| ||  |  | ||| |||||||||| |||||||||||||    
T  38119557 tcgtgtgtctcagtcaaactaaatgtgtcaacaacaattctcat 38119514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 110 - 284
Target Start/End: Complemental strand, 23273176 - 23273002
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  23273176 atattttcaagacattttgttcgttctgttgtactttcatgacatttgttactttgttggtatttcgatgacatatttttatgacaattgttcgtttcca 23273077  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgt 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23273076 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgt 23273002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 16269476 - 16269334
Alignment:
Q  167 ttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgattt 266  Q
    |||||||| |||||||||||| ||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||    
T  16269476 ttgtattttgatgacatatttctatgatatttgttcgtttttgtatcatattttcaatttcaattatgttggtaatttttgtttattaactttatgattt 16269377  T
Q  267 ggcattgaaacaatgtgtaaaaacacatgtaacaagttctgcc 309  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||    
T  16269376 ggcattgaaaaaatgtgtaaaaacacatttaacaggttctgcc 16269334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 22527197 - 22527267
Alignment:
Q  39 atcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22527197 atcttgaccaggaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagtagtagta 22527267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 45828751 - 45828840
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| |||| | |||||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  45828751 gttagggagcagatcgcgccgatcttgaccaggaggcgaggctagaggccaaggagaaggcaccagcagcatcagcaggaccaggagtag 45828840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 368 - 500
Target Start/End: Original strand, 38127494 - 38127628
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| |||||| ||||||||||| |||| ||| | | ||||||||| | |||||| || || |  ||||||||| ||||||||||  |||    
T  38127494 cagttaactgccgaggaaaacttcggtagttaactgcaaccggtatccacaaaattcgacagttaactaccaatagacatttaggtaaattactcgtgtg 38127593  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||||||||||||||||||||| |||||||||||    
T  38127594 tctcaacctaaccaaatgtgtcaacaacaattctc 38127628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 38120022 - 38119942
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||||| ||| |||| |||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  38120022 ccgatcttgaccaggaggctaggccaaaggccgaggaggaggcaccggcagcatcagtaggatcaggagtagtaatatttt 38119942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 47505523 - 47505607
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||| |||| |||||| || ||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47505523 ttagagagcagatcacgcctatcttgaccatgaggcgaggccagaggccgaggaggaggcaccaacagcatcagcaggaccagga 47505607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 11197043 - 11197129
Alignment:
Q  23 ggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||| |||| | ||||||||||  || ||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  11197043 ggagcagatcgcgccgatcttgactaggaggcgaggccagaggccgaagaggaggcaccaacaacatcagcaggaccaggagtagta 11197129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 368 - 500
Target Start/End: Complemental strand, 21141094 - 21140960
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| |||| ||||||| ||||| ||| | || |||||  ||| || ||||||||  || |||||||||||||| ||||||||||  |||    
T  21141094 cagttaactgccgaggaaatcctcggtcgttaactgccgtcggttttctaaaacttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtg 21140995  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||| || |||||||||||||| |||||||||||    
T  21140994 tctcagccaaaccaaatgtgtcaacaacaattctc 21140960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 51337080 - 51337165
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||| |||| |||| | ||||| |||  ||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  51337080 gttagagagcagatcgcgccgatattggccaggaggcgaggccagaggctgaggaggaggcaccagcagcatcagcaggaacagga 51337165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 94982 - 94901
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||| | || ||||||| ||| ||||||||| |||||||||||||||||||||   |||||||||||||||||||    
T  94982 ttagggagcagatcgcgcctatcttgaccaggaggcgaggctagaggccgaggaggaggcacc---agcatcagcaggaccagga 94901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 368 - 501
Target Start/End: Original strand, 47505889 - 47506024
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    ||||| |||||||| |||| ||||| ||||||| |||||||| |||||  ||| || |||| ||| |||||||  | ||||||||||||||||||  |||    
T  47505889 cagtttactgccgaggaaatcctcgatagttaactgcagccgattttctaaaacttcggcaattaactgccgagaggcatttagataaattactcttgtg 47505988  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctca 501  Q
    | ||| || |||||||||||||| || ||| |||||    
T  47505989 tctcagccaaaccaaatgtgtcaacagcaaatctca 47506024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 49854862 - 49854810
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  49854862 aggcgaggccagaggccgaggaggaggcaccaacaacatcaacaggaccagga 49854810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 386 - 497
Target Start/End: Complemental strand, 4208447 - 4208334
Alignment:
Q  386 aacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt--tcaacctaaccaaatg 483  Q
    |||||||| |||||| |||||||| ||    ||||||| |||||||| ||||||||||| ||||   |||||||||||||||  |||| | |||||||||    
T  4208447 aacctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcaatcaaaccaaatg 4208348  T
Q  484 tgtcagcaacaatt 497  Q
    ||||| ||||||||    
T  4208347 tgtcaacaacaatt 4208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 19159205 - 19159293
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||| | ||||| |||| ||| ||||||| ||||||||| |||||||||||||| |||||  | ||||||||| |||||||    
T  19159205 agggagcagatcgcgccgattttgaccaggaggcgagcccagaggcccaggaggaggcaccatcagcaggatcaggaccagtagtagta 19159293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 3943997 - 3944040
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  3943997 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 3944040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 3993893 - 3993850
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  3993893 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 3993850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 8548719 - 8548676
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  8548719 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 8548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 13636872 - 13636805
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||||| ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||    
T  13636872 agggagcagatcacgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagca 13636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 19522159 - 19522092
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||| | ||||| |||| ||  |||||||||||||||||||||||||||||||| |||||    
T  19522159 agggagcagatcgcgccgattttgaccaagaggcgaggccagaggccgaggaggaggcaccatcagca 19522092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 890 - 937
Target Start/End: Original strand, 34577071 - 34577118
Alignment:
Q  890 atacatcttacaagcatgtgaatctaattcagcagatatatctcccga 937  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  34577071 atacattttacaagcatgtgaatctaaatcagcagatatttctcccga 34577118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 15051397 - 15051355
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  15051397 aaaccggcggcagttaactgccgaggaaaacctcggtagttaa 15051355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 21144114 - 21144196
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||| |||| | | ||| |||| ||| |||||||||||||||||||||||||||||||| || ||  | |||||||||||    
T  21144114 agggagcagatcgcgctgattttgaccaggaggcgaggccagaggccgaggaggaggcaccatcaacaggaccaggaccagga 21144196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 308 - 378
Target Start/End: Complemental strand, 23272952 - 23272882
Alignment:
Q  308 ccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgc 378  Q
    ||||||||||||||||||| ||||   |||||| |||| || ||||||||||| ||||| |||||||||||    
T  23272952 ccattttatggcttcaggaagcctcaacagttacctacagaggaaaaatgaaatcggcggcagttaactgc 23272882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 52805073 - 52805119
Alignment:
Q  42 ttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  52805073 ttgaccaggaggcgaggccagaggccgaggaggaggcaccatcagca 52805119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 470581 - 470654
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||| || |||||  | ||||||||  |||||||    
T  470581 ccgattttgaccaggaggcgaggccagaggccgaggaggaggcagcatcagcaggaccaggaccaatagtagta 470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 3728760 - 3728801
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  3728760 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 3728801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 26879343 - 26879302
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  26879343 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 26879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 31780524 - 31780451
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||| |||| ||| ||||||| | |||||||||||||||||||||| |||||  | ||||||||| |||||||    
T  31780524 ccgattttgaccaggaggcgagcctagaggccgaggaggaggcaccatcagcaggaccaggaccagtagtagta 31780451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 5845559 - 5845491
Alignment:
Q  336 agttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaattgc 404  Q
    |||||||| |||| ||||||| ||||||||  ||||||||| |||| ||||||||||| | ||||||||    
T  5845559 agttaactgccgaggaaaaataaaaccggctgcagttaactaccgaggaaaacctcggcaattaattgc 5845491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 23273261 - 23273217
Alignment:
Q  39 atcttgagcagaaggcgaggccagaggccgaggaggaggcaccag 83  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||    
T  23273261 atcttgaccaggaggcgaggccagaggccgaggaggtggcaccag 23273217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 47661048 - 47661116
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcag 86  Q
    |||||||||| |||| | |||||||||| ||| |||||||||||  || ||| ||||||||||||||||    
T  47661048 gttagggagcagatcgcgccgatcttgaccaggaggcgaggccatgggtcgatgaggaggcaccagcag 47661116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 497
Target Start/End: Complemental strand, 49395672 - 49395541
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtg-- 465  Q
    ||||||||| |||| |||||||| || |||||| |||||||| || |  ||||||| |||  ||| || |||||||  |||| || ||||||||||||      
T  49395672 cagttaactaccgaggaaaacctaggcagttaactgcagccggttctttcaaaattcggctattaactaccgaagggtatttggacaaattactcgtgtt 49395573  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaatt 497  Q
    ||||| || || ||||||||||| ||||||||    
T  49395572 tttcagccaaatcaaatgtgtcaacaacaatt 49395541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 50617764 - 50617676
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||| ||||||| |||| ||| ||||||||| ||||||||||||||| ||| || |||||  | ||||||||  |||||||    
T  50617764 agggagcagatcgcaccgattttgaccaggaggcgaggctagaggccgaggaggatgcatcatcagcaggaccaggaccaatagtagta 50617676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 13633892 - 13633935
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||    
T  13633892 gaaaccggcggtagttaactgccgaggaaaacctcggtagttaa 13633935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 16270094 - 16270032
Alignment:
Q  337 gttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||||| |||||  ||||| |||  |||||||||||||||||||||||||| ||||||    
T  16270094 gttaactaccgaggaaaatagaaac-ggctgcagttaactgccgaagaaaacctcggcagttaa 16270032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 20353985 - 20353942
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| |||||| |||||||||||    
T  20353985 gaaaccggcggcagttaactgccgaggaaaacttcggtagttaa 20353942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 29622474 - 29622431
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||    
T  29622474 gaaaccggcggcagttaattgccgaggaaaacctcggtagttaa 29622431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 36183898 - 36183949
Alignment:
Q  336 agttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaa 387  Q
    |||||| |||||| ||||||| ||||||||  ||||||||||||||||||||    
T  36183898 agttaagtaccgaggaaaaataaaaccggcagcagttaactgccgaagaaaa 36183949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 38771652 - 38771695
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  38771652 gaaaccggcggcagttaactgccgaggaaaacctcgggagttaa 38771695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 22524150 - 22524192
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||    
T  22524150 aaaccggcggcagttaactcccgaggaaaacctcggtagttaa 22524192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 26878894 - 26878955
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  26878894 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 26878955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 35256254 - 35256217
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  35256254 aggcgaggccagaggccgaggaggagacaccaacagca 35256217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 41459283 - 41459218
Alignment:
Q  335 cagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||| ||||||| ||||| ||  ||||||||| |||| ||||||||||| ||||||    
T  41459283 cagttaactgccgaggaaaaataaaaccagctgcagttaactaccgaggaaaacctcggcagttaa 41459218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 4e-87; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 110 - 309
Target Start/End: Complemental strand, 11380783 - 11380584
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||    
T  11380783 atattttcatgacattttgttcgttctgttgtattttaatgacatttgttactttgtttgtatttcaatgacctttttatatgacaattgttcgtttccg 11380684  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttctgcc 309  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11380683 tatcatatttttaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaggttctgcc 11380584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 110 - 501
Target Start/End: Original strand, 42759949 - 42760348
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||  ||  |||||  ||||||||||||| |||||||||||||| ||||||||    
T  42759949 atattttcatgacatttggt-cgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcgatgacatatatttatgacaattgtccgtttccg 42760044  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgt-----------gtaaaaacacatgtaa 298  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||           ||||||||||||||||    
T  42760045 tatcatattttcagtttcaattatgttggtaattt-ctttgattgactttatgatttgacattgaaacaatgttttaacaacgtgtaaaaacacatgtaa 42760143  T
Q  299 caagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagtt 398  Q
    || |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||  ||| ||||||||| |||| |    |||||| ||||    
T  42760144 caggttctgccattttatggcttcaggacgcctcgacagttaactaccgaggaaaaatgaaacaagcggcagttaactaccgaggttttcctcggcagtt 42760243  T
Q  399 aattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgtttcaacctaaccaaatgtgtcagcaacaat 496  Q
    || | |||||| |   ||||||||| || ||||| | | |||||| ||||||| ||||||||||  |||| ||| || |||||||||||||| |||||||    
T  42760244 aactacagccggtaaccacaaaattcggtagttaaccggcgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaacaat 42760343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 110 - 374
Target Start/End: Original strand, 18752050 - 18752313
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||| ||    
T  18752050 atattttcatgacattt-gttcgttctgttgcattttcatgacatttgttactctgtttgtatttcgatgacattattgtatgacaattgttcgttttcg 18752148  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttctgcc 309  Q
    ||||||||||||||||||||||||| |||||||||||  | ||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18752149 tatcatattttcaatttcaattatgctggtaattttcgctaattaacttcatcatttggcattgaaacaatgtgtaaaaacacatgtaacaggttctgcc 18752248  T
Q  310 attttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaa 374  Q
    ||||  |||||||||||  | | || |||||| | |||| |||||| ||||||| || |||||||    
T  18752249 atttattggcttcaggaatcatcggtagttaagtgccgatgaaaaaggaaaccgacggcagttaa 18752313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 256 - 382
Target Start/End: Complemental strand, 49195134 - 49195008
Alignment:
Q  256 ctttatgatttggcattgaaacaatgtgtaaaaacacatgtaacaagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaa 355  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||  |||||    
T  49195134 ctttatgatttagcattgaaacaatgtgtaaaaacacatgcaacaggttctgccattttatggcttcaggacgcctcggtagttaactaccgagaaaaaa 49195035  T
Q  356 tgaaaccggcgacagttaactgccgaa 382  Q
    ||||| ||||| ||||||||| |||||    
T  49195034 tgaaatcggcggcagttaactaccgaa 49195008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 513 - 704
Target Start/End: Complemental strand, 24226698 - 24226506
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||||||||||||||||||||||||| | |||||  |||  ||||||||  |||||| |||| ||| ||| ||| ||| ||||||||||||||  |    
T  24226698 gcttcatccaccattttattcttacataatccattaatcatgactttgtagctacgaacattaggagtcattccccttagagaaatagtgttgaataact 24226599  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataa 704  Q
     | |||||||||| | |||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||  |||| |||||||||    
T  24226598 gtttggccttgttgacttctttaaccaagaaatacccatccatcaaagaattataagtaacaatattaggttccacacgttgttttatcataa 24226506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 368 - 488
Target Start/End: Complemental strand, 44523492 - 44523370
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| ||||||||| || ||||| |||||||| ||| ||||||||| | || ||| ||| ||||||| |||||| ||||||||||  |||    
T  44523492 cagttaactgccgaggaaaacctcagttgttaactgcagccgatttccacaaaattcgacaattaactgtcgaaggatatttaggtaaattactcgtgtg 44523393  T
Q  466 tttcaacctaaccaaatgtgtca 488  Q
    |||||||||||||||||||||||    
T  44523392 tttcaacctaaccaaatgtgtca 44523370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 42759837 - 42759917
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  42759837 ccgatcttgaccaagaggcgaggccagaggccgaggaggaggcaccagcagcattagcaggaccatgagtagtagtatttt 42759917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 11380913 - 11380815
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||||| |||| |  |||||||||  || | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11380913 gttagggagcagatcgcggcgatcttgactaggaagcgaggccaaaggccgaggaggaggcaccagcagcatcaacaggaccaggagtagtagtatttt 11380815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 6928301 - 6928390
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| |||| | |||||||||| ||| ||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||    
T  6928301 gttagggagcagatcgcgccgatcttgaccaggaggcgaggccagatgccaaggaggatgcaccagcaccatcagcaggaccaggagtag 6928390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 16861627 - 16861562
Alignment:
Q  38 gatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16861627 gatcttgaacaggaggcgaggccagaggccgaggaggaggcaccagcagcatcagtaggaccagga 16861562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 20353721 - 20353802
Alignment:
Q  22 gggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||| |||| | |||||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20353721 gggagcagatcgcgccgatcatgaccaggagacgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 20353802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 17561827 - 17561694
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgt 466  Q
    ||||||||||||| |||| |||||| |||||| |||||||| |||||  ||| || |||||||| ||| | | |||||||||| ||||||||||  ||||    
T  17561827 agttaactgccgaggaaatcctcgggagttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtgt 17561728  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
     ||| || || ||||||||||| |||||||||||    
T  17561727 ctcagccaaatcaaatgtgtcaacaacaattctc 17561694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 41615432 - 41615514
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccag 101  Q
    ||||||||| |||  | |||||||||| ||| ||| |||||||||||||||||||||||||||| || |||||||||||||||    
T  41615432 ttagggagcagattgcgccgatcttgaccaggaggtgaggccagaggccgaggaggaggcaccaacaacatcagcaggaccag 41615514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 369 - 500
Target Start/End: Original strand, 48566403 - 48566536
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgt--gt 466  Q
    ||||||||||||| |||||||||||||||||| ||| | || |||   || | || | |||||| |||||||||  || |||||||||||||||||  ||    
T  48566403 agttaactgccgaggaaaacctcggtagttaactgctgtcggtttcttcacacttcgacagttaactgccgaagagcacttagataaattactcgtatgt 48566502  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
     ||| ||||||||||||||||| |||||||||||    
T  48566503 ctcagcctaaccaaatgtgtcaacaacaattctc 48566536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 44232888 - 44232969
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 100  Q
    ||||||||| || | | |||||||||| ||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  44232888 ttagggagcagaacgcgccgatcttgaccaggaggcgagcccataggtcgaggaggaggcaccagcagcatcagcaggacca 44232969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 48565996 - 48566085
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| |||| | |||||||||| ||| |||  ||||||||||||||||||||||||||| || ||||| || ||||||||||||    
T  48565996 gttagggagcagatcgcgccgatcttgaccaggagggtaggccagaggccgaggaggaggcaccaacaacatcaacaagaccaggagtag 48566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 42804802 - 42804750
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  42804802 aggcgaggccagaggccgaggaggaggcaccaacagcatcagtaggaccagga 42804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 52388481 - 52388399
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||| |||| | || ||||||| ||| |||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  52388481 agggagcagatcgcgccaatcttgaccaggaggcgaggccagaggccgaggaggaggcaccatcagcaggaccaggaccagga 52388399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 48891722 - 48891775
Alignment:
Q  47 cagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 100  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  48891722 cagaaggcaaggccagaggctgaggaggaggcaccagcagcatcatcaggacca 48891775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 18751959 - 18752019
Alignment:
Q  57 ggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatattttc 117  Q
    ||||||||||||||||||||||| || || |||||||| ||||| ||||||||||||||||    
T  18751959 ggccagaggccgaggaggaggcaacaccaacatcagcaagaccaagagtagtaatattttc 18752019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 49144506 - 49144463
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  49144506 gaaaccggcggcagttaactgccgaagaaaacctcggtagttaa 49144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 368 - 502
Target Start/End: Original strand, 14043902 - 14044038
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||||||||    |||||| |||||| |||||||| |||||  ||| || | |||||| ||||||||||  |||| | |||||||||||||||    
T  14043902 cagttaactgccgaagttttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaagggtatttgggtaaattactcgtgtt 14044001  T
Q  468 --tcaacctaaccaaatgtgtcagcaacaattctcat 502  Q
      ||| || ||| |||||||| | |||||||||||||    
T  14044002 tctcagccaaactaaatgtgtaaacaacaattctcat 14044038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 16861197 - 16861065
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgt 466  Q
    |||||||| |||| |||| ||||||||||||| |||| ||| |||||  ||| || | |||||| ||| ||| || ||||||| ||||||||||  ||||    
T  16861197 agttaactaccgaggaaatcctcggtagttaactgcatccggttttctaaaacttcgacagttaactgtcgaggggcatttaggtaaattactcgtgtgt 16861098  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattct 499  Q
     ||| || |||||||||||||| || |||||||    
T  16861097 ctcagccaaaccaaatgtgtcaacagcaattct 16861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 2967975 - 2967932
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  2967975 gaaaccggcggcagttagctgccgaagaaaacctcggtagttaa 2967932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 3501945 - 3501902
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  3501945 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 3501902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4005267 - 4005196
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| ||  |||| ||||||||||||||||||||||||||| |||||  | ||||||||| |||||    
T  4005267 ccgatcttgaccaagaggcaaggccagaggccgaggaggaggcaccatcagcaggaccaggaccagtagtag 4005196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 9473461 - 9473528
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||| | ||||||||||  || |||||||| ||||||||||||||||||||||| |||||    
T  9473461 agggagcagatcgcgccgatcttgactaggaggcgaggtcagaggccgaggaggaggcaccatcagca 9473528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 30252933 - 30252898
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcag 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  30252933 aggcgaggccagaggccgaggaggaggcaccagcag 30252898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 500
Target Start/End: Complemental strand, 41612437 - 41612303
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| |||| ||||||||||||| ||| |||| |||||  ||| || | |||||| ||||| |  ||||||||  ||||||||||  |||    
T  41612437 cagttaactgccgaggaaatcctcggtagttaactgccgccgattttctaaaacttcgacagttaactgccaatagacatttatgtaaattactcgtgtg 41612338  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||| || |||| ||||||||| || ||||||||    
T  41612337 tctcagccaaacctaatgtgtcaacatcaattctc 41612303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 41844414 - 41844371
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  41844414 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 41844371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 47071054 - 47070987
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||| | ||||| |||| ||| |||||| ||||||||||||||||||||||||| |||||    
T  47071054 agggagcagatcgcgccgattttgaccaggaggcgatgccagaggccgaggaggaggcaccatcagca 47070987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 2271894 - 2271836
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||||||||||||||||||||||| |||||  | ||||||||| |||||||    
T  2271894 aggcgagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagtagta 2271836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 2274920 - 2275018
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||||||||||| |||| ||| | |||||||  || |||| ||| |  ||| ||||||||||| ||||| || ||||||||| ||||||||||||||    
T  2274920 cagttaactgccgaggaaatccttgatagttaacggccgccggtttactaaaactttggcagttaactgcccaatgacatttaggtaaattactcgtgt 2275018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 8475850 - 8475892
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  8475850 aaaccggcggcagttaactgccgaggaaaacctcggtagttaa 8475892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 36130655 - 36130741
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    ||||||| |||| | |||||||||| ||  | || ||||||||||||||||||||||||||| |||||  | ||||||||| |||||    
T  36130655 agggagcagatcgcgccgatcttgaccaagatgcaaggccagaggccgaggaggaggcaccatcagcacgaccaggaccagtagtag 36130741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 40871895 - 40871833
Alignment:
Q  329 ccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctc 391  Q
    |||||||||||||||||||| ||||||| ||| || |  ||||||||||||||| ||||||||    
T  40871895 ccttggcagttaactaccgaggaaaaataaaatcgcctgcagttaactgccgaaaaaaacctc 40871833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 2648444 - 2648359
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagta 106  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||  | ||||||||| ||||    
T  2648444 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagta 2648359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 46697736 - 46697777
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  46697736 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 46697777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 49266218 - 49266177
Alignment:
Q  40 tcttgagcagaaggcgaggccagaggccgaggaggaggcacc 81  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  49266218 tcttgaccaggaggcgaggccagaggccgaggaggaggcacc 49266177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 50477205 - 50477246
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  50477205 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 50477246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 401
Target Start/End: Complemental strand, 1835377 - 1835333
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaat 401  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||    
T  1835377 gaaaccggcggcagttaactgccgagaaaaacctcggtagttaat 1835333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 16646695 - 16646747
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||| |||| ||| ||||||||||||||| |||||||||||||||| |||||    
T  16646695 ccgattttgaccaggaggcgaggccagaggtcgaggaggaggcaccatcagca 16646747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 425 - 469
Target Start/End: Complemental strand, 34645574 - 34645530
Alignment:
Q  425 ggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||    
T  34645574 ggcagttaactgccgaaggatatttaggtaaattactcgtgtttc 34645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 46344971 - 46345007
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgc 404  Q
    |||||||||||||| ||||||||||||||||||||||    
T  46344971 cagttaactgccgaggaaaacctcggtagttaattgc 46345007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 3953265 - 3953222
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  3953265 gaaaccggcggcagttaactgccgaggaaaacctcgggagttaa 3953222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 6745376 - 6745333
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||| | ||||||||||||||||||    
T  6745376 gaaaccggcggcagttaactgccaaggaaaacctcggtagttaa 6745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 7941179 - 7941049
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||||||||    |||| | |||||| |||||||| || |   ||| || |||||||| ||||||||||  |||||| |||||||||||||||    
T  7941179 cagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttaggtaaattactcgtgtt 7941080  T
Q  468 --tcaacctaaccaaatgtgtcagcaacaat 496  Q
      ||| || |||||||||||| | |||||||    
T  7941079 tctcagccaaaccaaatgtgtgaacaacaat 7941049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 8156531 - 8156574
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  8156531 gaaaccggcggcagttaactgccgaggaaaacctcggcagttaa 8156574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 678
Target Start/End: Original strand, 9628545 - 9628608
Alignment:
Q  615 tggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacatt 678  Q
    |||||||| ||| ||  ||||| |||||||||||||||||||||| |  |||||||||||||||    
T  9628545 tggccttgctcagttgattaactaagaaataaccatccattaaagcaccataagtaacaacatt 9628608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 400
Target Start/End: Original strand, 19440255 - 19440322
Alignment:
Q  333 ggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||||| ||||||||     ||||||||  |||||||||||||| ||||||||||||||||||    
T  19440255 ggcagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaacctcggtagttaa 19440322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 20918057 - 20918018
Alignment:
Q  361 ccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  20918057 ccggctacagttaactgccgaggaaaacctcggtagttaa 20918018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 20927019 - 20926980
Alignment:
Q  361 ccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  20927019 ccggctacagttaactgccgaggaaaacctcggtagttaa 20926980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 30943212 - 30943255
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  30943212 gaaactggcggcagttaactgccgaggaaaacctcggtagttaa 30943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 35743632 - 35743589
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||    
T  35743632 gaaatcggcggcagttaactgccgaggaaaacctcggtagttaa 35743589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 400
Target Start/End: Original strand, 41802997 - 41803064
Alignment:
Q  333 ggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||||| ||||||||     ||||||||  |||||||||||||| ||||||||||||||||||    
T  41802997 ggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtagttaa 41803064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 41844172 - 41844215
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| ||||||||||| || ||||||||||||||||||    
T  41844172 gaaaccggcggcagttaactgctgaggaaaacctcggtagttaa 41844215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 500
Target Start/End: Complemental strand, 49265857 - 49265723
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgt--g 465  Q
    ||||| |||||||| |||| |||||| |||||| | |||||| |||||  ||| || |||| ||| |||  || || ||||||  ||||||||| ||  |    
T  49265857 cagtttactgccgaggaaatcctcggaagttaactacagccggttttctaaaacttcggcaattaactgatgaggggcatttaagtaaattacttgtatg 49265758  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | |||||| |||||||||||||| |||||||||||    
T  49265757 tctcaaccaaaccaaatgtgtcaacaacaattctc 49265723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 82
Target Start/End: Complemental strand, 50214005 - 50213974
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||||||||||||||||||||||||||||    
T  50214005 aggcgaggccagaggccgaggaggaggcacca 50213974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 42165187 - 42165229
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||    
T  42165187 aaaccggcggcagttaattgccgaggaaaacctcggtagttaa 42165229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 2062455 - 2062354
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||||||||    |||||  |||||| |||||||  |||||  ||| || |||||||| ||||||||||  |||| |||||||||||||| ||    
T  2062455 cagttaactgccgaagttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggtatttggataaattactcgtatt 2062356  T
Q  468 tc 469  Q
    ||    
T  2062355 tc 2062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 12374023 - 12374084
Alignment:
Q  125 tttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatt 186  Q
    |||||||||| ||||  ||||||||||||||| ||| ||| |||||| || |||||||||||    
T  12374023 tttgttcgtttcgttatattttcatgacatttcttagtttctttgtagtttgatgacatatt 12374084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 34048610 - 34048671
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  34048610 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 34048671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 41579772 - 41579731
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||  |||||||||||||| ||||||||||||||||||    
T  41579772 aaccggctgcagttaactgccgaggaaaacctcggtagttaa 41579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 42901028 - 42900967
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  42901028 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 42900967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 46698183 - 46698122
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  46698183 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 46698122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 405
Target Start/End: Original strand, 46989581 - 46989618
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgca 405  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  46989581 cagttaactgccgaggaaaacctcggtagttaactgca 46989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 49141398 - 49141337
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  49141398 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 49141337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 54389310 - 54389371
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  54389310 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 54389371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 6e-86; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 110 - 409
Target Start/End: Complemental strand, 11630084 - 11629759
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  11630084 atatttttatgacattttgttcgttccgttatattttcatgacatttgttactttgttggtatttcgatgacatatttttatgacaattgttcgttttcg 11629985  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgt------------aaaaacacatgta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||            |||||||||||||    
T  11629984 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttgacattgaaacaatgtgtttacaatgtgtaaaaaacacatgta 11629885  T
Q  298 acaagttctgc--------------cattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaag 383  Q
    ||| |||||||              |  ||||| ||||||||| |||| | |||||||||||||| ||||||||||||||||| |||||||||| ||| |    
T  11629884 acaggttctgcctcaagaggttctgccatttattgcttcaggaagcctcgacagttaactaccgaggaaaaatgaaaccggcggcagttaactgtcgagg 11629785  T
Q  384 aaaacctcggtagttaattgcagccg 409  Q
    |||||||||| |||||| ||||||||    
T  11629784 aaaacctcggcagttaactgcagccg 11629759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 172 - 500
Target Start/End: Original strand, 37344890 - 37345241
Alignment:
Q  172 tttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcat 271  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37344890 tttcgacgacatatatttatgacaattgttcgttttcgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcat 37344989  T
Q  272 tgaaacaatgtgtaaaaacac------atgtaac---------------aagttctgccattttatggcttcaggacgccttggcagttaactaccgaag 350  Q
    |||||||||||||||||||||      |||||||               | ||||||||||||||||||||||||||||||   |||||||||||||| |    
T  37344990 tgaaacaatgtgtaaaaacacatgcatatgtaacaggttctacctcaagaggttctgccattttatggcttcaggacgcctctacagttaactaccgagg 37345089  T
Q  351 aaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacattta 450  Q
    |||||||||| ||||| |||||||||||||| ||||| ||||| |||||| ||||| || | | || |||||| | |||||| |||||||||||||||||    
T  37345090 aaaaatgaaatcggcggcagttaactgccgaggaaaatctcgggagttaactgcagtcggtatccataaaattcgacagttaactgccgaaggacattta 37345189  T
Q  451 gataaattactc--gtgtttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||||||||||  |||| ||| ||||||||||| ||||| || ||||||||    
T  37345190 ggtaaattactcgtgtgtctcagcctaaccaaatatgtcaacatcaattctc 37345241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 110 - 284
Target Start/End: Original strand, 41735034 - 41735204
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| |  |||| ||||| ||||||||||||||||||  ||  |||||  ||||| ||||||| ||||||||||||||| ||||||     
T  41735034 atattttcatgacatttagc-cgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcgacgacatatatttatgacaattgtttgtttcca 41735129  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgt 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  41735130 tatcatattttcaatttcaattatgttagtaattttctttgattgactttatgatttgacattgaaagaatgtgt 41735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 17747392 - 17747275
Alignment:
Q  167 ttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgattt 266  Q
    |||||||| |||||||||||| ||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||| | | ||| |  |||||||||    
T  17747392 ttgtattttgatgacatatttctatgacagttgttggttttcgtatcatattttcaatttaaattatgttggtaattttatcttattaatattatgattt 17747293  T
Q  267 ggcattgaaacaatgtgt 284  Q
    ||||||||||||||||||    
T  17747292 ggcattgaaacaatgtgt 17747275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 16488740 - 16488857
Alignment:
Q  167 ttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgattt 266  Q
    |||||||||||||||| |||| |||||||||| ||  ||| ||||||| ||||||||||| |||||||||||||||||   || ||| | ||||||||||    
T  16488740 ttgtatttcgatgacacatttctatgacaattattgtttttcgtatcaaattttcaatttaaattatgttggtaatttctgtttattaaatttatgattt 16488839  T
Q  267 ggcattgaaacaatgtgt 284  Q
    ||||||||||||||||||    
T  16488840 ggcattgaaacaatgtgt 16488857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 47521851 - 47521767
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||| | ||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47521851 ttagggagcagatcgcgcctgtcttgaccaggaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 47521767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 16680636 - 16680718
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccag 101  Q
    ||||||||  |||| | |||||||||| ||| |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  16680636 ttagggagtagatcgcgccgatcttgatcaggaggcgaggtcagaggccgaggaggaggcaccagcagcattagcaggaccag 16680718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 17654872 - 17654954
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccag 101  Q
    ||||||||  |||| | |||||||||| ||| |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  17654872 ttagggagtagatcgcgccgatcttgatcaggaggcgaggtcagaggccgaggaggaggcaccagcagcattagcaggaccag 17654954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 41734904 - 41735002
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||| | |||| | |||||||||| ||| |||||||  || ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41734904 gttagggaacagatcgcgccgatcttgaccaggaggcgagttcataggtcaaggaggaggcaccagcagcatcagcaggaccaggagtagtagtatttt 41735002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 368 - 501
Target Start/End: Original strand, 5541547 - 5541682
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| |||| |||||| |||||| ||| |||| |||||  ||| |||| |||||| ||||| |||| ||||||| ||||||||||  |||    
T  5541547 cagttaactgccgaggaaatcctcgggagttaactgccgccggttttctaaaactttgacagttaactgccaaagggcatttaggtaaattactcgtgtg 5541646  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctca 501  Q
    | ||| || |||||||||||||| ||||||| ||||    
T  5541647 tctcagccaaaccaaatgtgtcaacaacaatcctca 5541682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 369 - 500
Target Start/End: Original strand, 19804494 - 19804627
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgt 466  Q
    ||||||||||| | |||| |||||| |||||| |||||||| ||| |||||| || |||||||| || |||| || ||||||| ||||||||||  ||||    
T  19804494 agttaactgccaaggaaatcctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgt 19804593  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
     ||| || ||| |||||||||| |||||||||||    
T  19804594 ctcagccaaacaaaatgtgtcaacaacaattctc 19804627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 37343426 - 37343524
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||| ||| |||| | ||||||||||  || ||||||||||||| ||||| ||||||||||||| |||||||||| ||||| |||||||| ||||||    
T  37343426 gttaggaagcagatcgcgccgatcttgactaggaggcgaggccagaagccgatgaggaggcaccagtagcatcagcaagaccatgagtagtagtatttt 37343524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 500
Target Start/End: Complemental strand, 41734213 - 41734126
Alignment:
Q  415 cacaaaatttggcagttatctgccgaaggacatttagataaattactcgt--gtttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    ||||||||| | |||||| |||||||||| |||||| |||||||||||||  || ||| ||||||||||||||||| |||||||||||    
T  41734213 cacaaaattcgacagttaactgccgaagggcatttaaataaattactcgtgcgtctcagcctaaccaaatgtgtcaacaacaattctc 41734126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 47670048 - 47669996
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  47670048 aggcgatgccagaggccgaggaggaggcaccagtagcatcagcaggaccagga 47669996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 520 - 621
Target Start/End: Original strand, 13093653 - 13093755
Alignment:
Q  520 ccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacatatgtggc 618  Q
    |||||| |||||||||||| ||| | |||||  ||||||||||||||||||||| ||||  |||||| |  || ||||||| ||||||||||||||||||    
T  13093653 ccaccaatttattcttacacaatccattaattatgatattgtagctttgaacatcaggaggcactccccaccgggcaatagagttgaatacatatgtggc 13093752  T
Q  619 ctt 621  Q
    |||    
T  13093753 ctt 13093755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 27450562 - 27450481
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||| | || ||||||| ||| ||||||||||||||||||||   ||||||||| ||||||||||||||||||||    
T  27450562 ttagggagcagatcgcgcctatcttgaccaggaggcgaggccagaggccgag---gaggcaccaacagcatcagcaggaccagga 27450481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 36980755 - 36980807
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  36980755 aggcgagaccagaggccgaggaggaggcacgaacagcatcagcaggaccagga 36980807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 368 - 500
Target Start/End: Original strand, 556649 - 556783
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||| | |||| ||| ||||||||||||| |||  |||||  ||| |||| |||||| ||| | |  ||||||||||||||||||||  |||    
T  556649 cagttaactgccaaggaaatccttggtagttaattgccgccagttttctaaaactttgacagttaactgtcaagagacatttagataaattactcgtgtg 556748  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||| || ||| |||||||||| |||||||||||    
T  556749 tctcagccaaacaaaatgtgtcaacaacaattctc 556783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 5538423 - 5538356
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||| | ||||| |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  5538423 agggagcagatcgcgccgattttgaccaggaggcgaggccagaggccgaggaggaggcaccatcagca 5538356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 9491866 - 9491784
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 100  Q
    |||||| ||| |||| | |||||| | | ||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  9491866 gttaggcagcagatcgcgccgatcattaccaggaggcgaggccaaaggccgaggaggaggcaccaccagcaccagcaggacca 9491784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 15074278 - 15074235
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  15074278 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 15074235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 18105396 - 18105439
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  18105396 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 18105439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 20564096 - 20564139
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  20564096 gaaaccggcggcagttagctgccgaagaaaacctcggtagttaa 20564139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 45767911 - 45767868
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  45767911 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 45767868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 357 - 399
Target Start/End: Original strand, 10097939 - 10097981
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagtta 399  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  10097939 gaaaccggcggcagttaactgccgaggaaaacctcggtagtta 10097981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 19801695 - 19801761
Alignment:
Q  37 cgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||  ||| |||||||||||||||||||||||||||  || ||||||| ||||||||    
T  19801695 cgatcttgaccagggggcaaggccagaggccgaggaggaggcaccaatagtatcagcaagaccagga 19801761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 40140739 - 40140801
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtag 396  Q
    |||||||||| |||| ||||||| ||| ||||  |||||||||||||| ||||||||||||||    
T  40140739 gcagttaactgccgaggaaaaataaaatcggctccagttaactgccgaggaaaacctcggtag 40140801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 15071155 - 15071070
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagta 106  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||  | ||||||||| ||||    
T  15071155 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagta 15071070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 16488549 - 16488634
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||| |||||| | ||||||||  || |||||||||||  ||||||  ||| |||| || ||||||||||||||||||||    
T  16488549 gttagggagccgatcacgctgatcttgactaggaggcgaggccaagggccgacaaggcggcaacaacagcatcagcaggaccagga 16488634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 16674838 - 16674786
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaa 420  Q
    |||||||||||||| |||| ||||||||||||| |||||||| ||| ||||||    
T  16674838 cagttaactgccgaggaaatcctcggtagttaactgcagccggtttccacaaa 16674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 17649206 - 17649154
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaa 420  Q
    |||||||||||||| |||| ||||||||||||| |||||||| ||| ||||||    
T  17649206 cagttaactgccgaggaaatcctcggtagttaactgcagccggtttccacaaa 17649154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 15070378 - 15070421
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||    
T  15070378 gaaatcggcggcagttaactgccgaggaaaacctcggtagttaa 15070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 25195947 - 25196025
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    ||||||||||||| |||||||| ||    || || |||||||||| ||||||| |||||||||  |||||||||||||||||    
T  25195947 cctcggtagttaactgcagccggttc---cataacttggcagttaactgccgatggacatttatgtaaattactcgtgtttc 25196025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 29097884 - 29097962
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    ||||||||||||| |||||||| ||    || |||| |||||||| ||||||| ||| |||| |||||||||||||||||||    
T  29097884 cctcggtagttaactgcagccggttc---cataattcggcagttaactgccgagggatatttggataaattactcgtgtttc 29097962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 30791058 - 30791015
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||    
T  30791058 gaaaccggcggcagttaactaccgaggaaaacctcggtagttaa 30791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 41884176 - 41884133
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  41884176 gaaaccggcggcagttaactgccgaggaaaacctcggaagttaa 41884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 47521429 - 47521351
Alignment:
Q  425 ggcagttatctgccgaaggacatttagataaattactcgtgtt--tcaacctaaccaaatgtgtcagcaacaattctca 501  Q
    |||||||| |||||||  | ||||||| |||||||||||||||  ||| |  |||||||||||||| ||||||||||||    
T  47521429 ggcagttaactgccgagaggcatttaggtaaattactcgtgtttctcagctaaaccaaatgtgtcaacaacaattctca 47521351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 7975658 - 7975620
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtag 396  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  7975658 aaaccggcggcagttaactgccgaggaaaacctcggtag 7975620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 17834511 - 17834553
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| |||||| |||||||||||    
T  17834511 aaaccggcggcagttaactgccgaggaaaacttcggtagttaa 17834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 27657087 - 27657009
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||| |||||| ||||||||| ||||  ||| ||||||||||| ||||||| || |||||  |||| ||||||||||    
T  27657087 cctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggcatttgaataatttactcgtgt 27657009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 9368274 - 9368213
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  9368274 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 9368213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 12081249 - 12081298
Alignment:
Q  420 aatttggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    |||| |||| ||| |||||||||| ||||| |||||||||||||||||||    
T  12081249 aattcggcaattaactgccgaagggcatttggataaattactcgtgtttc 12081298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 387
Target Start/End: Original strand, 16488883 - 16488947
Alignment:
Q  322 caggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaa 387  Q
    |||||||| ||||||||||||| |||| |||||  | ||||| ||||||||||||||||| |||||    
T  16488883 caggacgcattggcagttaactgccgaggaaaagag-aaccgacgacagttaactgccgaggaaaa 16488947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 34741897 - 34741958
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| |||||||||||| ||||||| |||||||||||    
T  34741897 agggagcagatcgcgccgattttgaccaggaggcgaggccaggggccgagaaggaggcacca 34741958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 35607263 - 35607202
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  35607263 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 35607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 41883725 - 41883786
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  41883725 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 41883786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 48406543 - 48406604
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  48406543 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 48406604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 4e-84; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 110 - 382
Target Start/End: Complemental strand, 5301070 - 5300772
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  5301070 atattttcatgacattttgttcgttccgttgtattttcatgacatttgttactttgttggtatttcaatgacatatttttatgacaattgttcgtttctg 5300971  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaat-----------gtgtaaaaacacatgtaa 298  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||           ||||||||| ||||||||    
T  5300970 tatcatattttcaatttcaattatgttagtaattttctttgattgactttatgatttggcattgaaacaatgtgtttacaatgtgtaaaaatacatgtaa 5300871  T
Q  299 caagtt---------------ctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaa 382  Q
    || |||               |||||||||||||||||||||| |||| |||||||||||||| |  |||||||||||||||| |||||||||||||||    
T  5300870 caggttctgcctcaagaggttctgccattttatggcttcaggaagcctcggcagttaactaccaagaaaaaatgaaaccggcggcagttaactgccgaa 5300772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 172 - 409
Target Start/End: Original strand, 45133070 - 45133318
Alignment:
Q  172 tttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcat 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  45133070 tttcgatgacatatttttatgaaaattgttcgtttccgtatcatattttcaatttcaattttgttggtaattttctttgattaactttatgatttggcat 45133169  T
Q  272 tgaa-----------acaatgtgtaaaaacacatgtaacaagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaa 360  Q
    ||||           ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || |||||| | |||| |||||||||||    
T  45133170 tgaaacaatgtgtttacaatgtgtaaaaacacatgtaacaggttctgccattttatggcttcaggatgcctcggtagttaattgccgaggaaaaatgaaa 45133269  T
Q  361 ccggcgacagttaactgccgaagaaaacctcggtagttaattgcagccg 409  Q
    |||||| ||||||||  ||||||    ||||||||||||| ||||||||    
T  45133270 ccggcggcagttaacaaccgaagttttcctcggtagttaactgcagccg 45133318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 34819491 - 34819402
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| |||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34819491 gttagggagcagatcgcgccgatcttgaccaggaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 34819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 40075581 - 40075492
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| |||| | |||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40075581 gttagggagcagatcgcgccgatcttgaccatgaggcgaggccagaggccgaggaggaggcaccagcaacatcagcaggaccaggagtag 40075492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 5301200 - 5301118
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 100  Q
    |||||||||  |||| | ||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5301200 gttagggagtagatcgcgccgatcttgactaggaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacca 5301118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 369 - 500
Target Start/End: Original strand, 20859609 - 20859742
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgt 466  Q
    ||||||||||||| |||| |||||| |||||| |||||||| ||| |||||| || |||||||| ||| ||| |||||||||| |||||| |||  ||||    
T  20859609 agttaactgccgaggaaatcctcgggagttaaatgcagccggtttccacaaacttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtgt 20859708  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
     ||| || |||||||||||||| |||||||||||    
T  20859709 ctcagccaaaccaaatgtgtcaacaacaattctc 20859742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 30761153 - 30761068
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||| |||| | ||||| |||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30761153 gttagggagcagatcgcgccgatattggccaggaggcgaggccagaggccgaggaggaggcaccagcagcatcagtaggaccagga 30761068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 35554764 - 35554853
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||| ||||   ||||| |||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  35554764 gttagggagcagatcgtgccgattttgaccaggaggcgaggacagaggccgaggaggaggcaccagcaccatcagcaggaccaggagtag 35554853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 39831622 - 39831541
Alignment:
Q  22 gggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||| |||| | || ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  39831622 gggagcagatcgcgcctatcttgaccaggaggcgaggccagaggccgaggaggatgcaacagcagcatcagcaggaccagga 39831541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 5680148 - 5680223
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatt 186  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||| ||||||||||||| |||||||||||    
T  5680148 atattttcatgacattt-gttcgttccgttttattttcatgacattttttagtttgtttgtattttgatgacatatt 5680223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 20859190 - 20859270
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggacc 99  Q
    |||||||||  ||| | |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20859190 ttagggagcaaatcgcgccgatcttgaccaagaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaagacc 20859270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 368 - 500
Target Start/End: Complemental strand, 39491176 - 39491042
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| ||||| ||||| |||||| || ||||| |||  | |||||| | |||||| |||||||| ||||||||  ||||||||||  |||    
T  39491176 cagttaactgccgaggaaaatctcggaagttaactgtagccggtttctataaaattcgacagttaactgccgaaagacatttatgtaaattactcgtgtg 39491077  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||| | ||||||||||||||| |||||||||||    
T  39491076 tctcagcttaaccaaatgtgtcaacaacaattctc 39491042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 384 - 502
Target Start/End: Complemental strand, 40075185 - 40075065
Alignment:
Q  384 aaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgtttcaacctaaccaaa 481  Q
    ||||||||||||||||| |||| ||| |||   ||||||| |||| ||| ||| |||||| ||||||  ||||||||||  |||| ||| ||||||||||    
T  40075185 aaaacctcggtagttaactgcaaccgctttcttcaaaattcggcacttaactgtcgaagggcatttaagtaaattactcgtgtgtctcagcctaaccaaa 40075086  T
Q  482 tgtgtcagcaacaattctcat 502  Q
    ||||||| |||||||||||||    
T  40075085 tgtgtcaacaacaattctcat 40075065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 21176090 - 21176015
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatt 186  Q
    ||||||||||||| ||| ||| ||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||    
T  21176090 atattttcatgaccttt-gttagttccgttgtattttcatgacattttttagtttgtttgtattttgatgacatatt 21176015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 45132918 - 45133010
Alignment:
Q  24 gagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||| |||||| ||||| |||  ||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| |||||||| ||||||    
T  45132918 gagcagatcacgccgatattggccaggaggagaggccagaggccgaggaggcggcaccagcagcatcaacaagaccatgagtagtagtatttt 45133010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 368 - 500
Target Start/End: Complemental strand, 20854686 - 20854552
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||| || |||| ||||  ||||||| ||| |||| |||||  ||| || |||||||| ||||||| |||||| |||||||||||||||||||    
T  20854686 cagttaactgcggaggaaatcctcaatagttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtt 20854587  T
Q  468 --tcaacctaaccaaatgtgtcagcaacaattctc 500  Q
      ||| ||| | ||||||||| | |||||||||||    
T  20854586 tctcagccttatcaaatgtgtgaacaacaattctc 20854552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 39831224 - 39831091
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgt 466  Q
    ||||||||||||| ||||   || |||||||| |||||||| |||||  ||| || |||||||| || |||| || ||||||| ||||||||||  ||||    
T  39831224 agttaactgccgaggaaattttcagtagttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgt 39831125  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
     ||| || |||||||||||||| |||||||||||    
T  39831124 ctcagccaaaccaaatgtgtcaacaacaattctc 39831091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 15033637 - 15033549
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||| | ||||| |||| ||| ||||||| |||||||||||||||||||||||| |||||  | ||||||||| |||||||    
T  15033637 agggagcagatcgcgccgattttgaccaggaggcgagcccagaggccgaggaggaggcaccatcagcaggatcaggaccagtagtagta 15033549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 41239411 - 41239359
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  41239411 ccgattttgaccaggaggcgaggccagaggccgaggaggaggcaccatcagca 41239359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 184602 - 184559
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  184602 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 184559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 426 - 469
Target Start/End: Complemental strand, 7120911 - 7120868
Alignment:
Q  426 gcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  7120911 gcagttaactgccgaaggatatttagataaattactcgtgtttc 7120868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 8419427 - 8419470
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  8419427 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 8419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 13782304 - 13782174
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||||||||    |||||| |||||||||||| || || |   ||| ||||||||||| ||||||| |||||||||  ||| |||||||||||    
T  13782304 cagttaactgccgaagttttcctcggcagttaattgcagtcggttctttaaaattttggcagttaactgccgagggacatttaagtaatttactcgtgtt 13782205  T
Q  468 --tcaacctaaccaaatgtgtcagcaacaat 496  Q
      ||| || || ||||||||||| |||||||    
T  13782204 tctcagccaaatcaaatgtgtcaacaacaat 13782174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 22014269 - 22014312
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  22014269 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 22014312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 32375674 - 32375717
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  32375674 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 32375717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 36677979 - 36677936
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  36677979 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 36677936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 22550889 - 22550967
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||| |||||| ||||||||  ||||  ||| || |||||||| |||||||||| ||||||| ||||||||||||||    
T  22550889 cctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattactcgtgt 22550967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 26663081 - 26663040
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  26663081 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 26663040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 486
Target Start/End: Complemental strand, 35551735 - 35551615
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    ||||||| |||||| ||||| ||| |||||||| | ||| || ||| ||| ||||| | ||||||  ||| ||| ||||||||| ||||||||||  |||    
T  35551735 cagttaattgccgaggaaaatctcagtagttaactacagtcggtttccactaaattcgacagttaaatgctgaatgacatttaggtaaattactcgtgtg 35551636  T
Q  466 tttcaacctaaccaaatgtgt 486  Q
    | ||| |||||||||||||||    
T  35551635 tctcagcctaaccaaatgtgt 35551615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 40745337 - 40745386
Alignment:
Q  420 aatttggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    |||| |||||||| ||||||| |||||||| |||||||||||||||||||    
T  40745337 aattcggcagttaactgccgagggacatttggataaattactcgtgtttc 40745386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 427 - 502
Target Start/End: Complemental strand, 44885725 - 44885649
Alignment:
Q  427 cagttatctgccgaaggacatttagataaattactcgtgtttc-aacctaaccaaatgtgtcagcaacaattctcat 502  Q
    |||||| |||||||| || ||||| |||||||||||||||||| | || |||||||||||| | || ||||||||||    
T  44885725 cagttaactgccgaaagatatttaaataaattactcgtgtttctagccaaaccaaatgtgtaaacatcaattctcat 44885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 3695416 - 3695338
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    ||||||||||||| |||||||| ||    || |||| |||||||| ||||||| || ||||| |||||||||||||||||||    
T  3695416 cctcggtagttaactgcagccggttc---cataattcggcagttaactgccgaggggcatttggataaattactcgtgtttc 3695338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 7344607 - 7344564
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  7344607 gaaaccggcggcagttaactgccgaggaaaacctcgggagttaa 7344564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 15030907 - 15030950
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  15030907 gaaaccggcggcagttaactgccgaggaaaacctcgggagttaa 15030950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 17924333 - 17924290
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| ||||||||||||||  |||||||||||||||||    
T  17924333 gaaaccggcggcagttaactgccgagaaaaacctcggtagttaa 17924290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 503
Target Start/End: Complemental strand, 31745248 - 31745114
Alignment:
Q  371 ttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt--t 468  Q
    |||||||||||||    |||| |||||||| |||||| |||||||  ||| || |||||||| || |||||||  |||| | |||||||||||||||  |    
T  31745248 ttaactgccgaagttttcctcagtagttaactgcagctgtttttctaaaacttcggcagttaactaccgaagggtatttgggtaaattactcgtgtttct 31745149  T
Q  469 caacctaaccaaatgtgtcagcaacaattctcatt 503  Q
    || || ||||||||| || | || |||||||||||    
T  31745148 cagccaaaccaaatgcgtaaacagcaattctcatt 31745114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 35645967 - 35645889
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc 469  Q
    ||||||||||||| |||| ||||||    || |||| |||||||| |||||||||||||||| ||||||||| | |||||||    
T  35645967 cctcggtagttaactgcatccgtttc---cataattcggcagttaactgccgaaggacatttggataaattagtagtgtttc 35645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 45066411 - 45066368
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||    
T  45066411 gaaaccggcggcagttaactgccgaggaaaacctcggtaattaa 45066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 388 - 464
Target Start/End: Complemental strand, 914766 - 914693
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgt 464  Q
    |||||| |||||| |||||||| |||   || ||||||||||||| |||||||||| ||||| | ||||||||||||    
T  914766 cctcggcagttaactgcagccggttt---cataatttggcagttaactgccgaagggcatttgggtaaattactcgt 914693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 600 - 694
Target Start/End: Original strand, 13904806 - 13904900
Alignment:
Q  600 tgttgaatacatatgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgt 694  Q
    ||||||||||||   |||||||||||| ||  ||||| ||| |||| ||||||||||  |||||||| ||||||||||  ||| ||||| |||||    
T  13904806 tgttgaatacatgcttggccttgttcacttgattaactaagcaatacccatccattagtgaagtatatgtaacaacatcgggtaccacaccttgt 13904900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 22547518 - 22547444
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc 462  Q
    ||||||||||||| ||||||||  ||||  ||| || |||||||| |||||||||| |||||||  |||||||||    
T  22547518 cctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggcaaattactc 22547444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 34367496 - 34367414
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||| |||| | | ||| |||| ||| |||||||||||| |||||||||||||||| || |||||  | |||||||||||    
T  34367496 agggagcagatcgcgctgattttgaccaggaggcgaggccaggggccgaggaggaggcagcatcagcaggaccaggaccagga 34367414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 37328855 - 37328944
Alignment:
Q  415 cacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc--aacctaaccaaatgtgtcagcaacaattctcat 502  Q
    ||||||||| |||||||| ||||||||| ||||||| |||  ||||| |||| ||  | || |||||||||||||| ||| |||||||||    
T  37328855 cacaaaattcggcagttaactgccgaagaacatttaaatatcttacttgtgtgtctcagccaaaccaaatgtgtcaacaataattctcat 37328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 1055711 - 1055772
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  1055711 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 1055772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 4866506 - 4866457
Alignment:
Q  365 cgacagttaactgccgaagaaaacctcggtagttaattgcagccgttttt 414  Q
    |||||||||||| |||| ||||| |||||||||||| |||||||| ||||    
T  4866506 cgacagttaactaccgaggaaaaactcggtagttaactgcagccggtttt 4866457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 23019159 - 23019098
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  23019159 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 23019098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 26662632 - 26662693
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  26662632 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 26662693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 30755745 - 30755688
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctc 391  Q
    |||||||||| |||| ||||||| |||||||   |||||||||||||| |||||||||    
T  30755745 gcagttaactgccgaggaaaaataaaaccggttgcagttaactgccgaggaaaacctc 30755688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 40740975 - 40740874
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||||||||    |||||| |||||| |||||||| || |   ||| || |||||||| ||| ||||||| |||| | |||||||||||||||    
T  40740975 cagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaaggatatttgggtaaattactcgtgtt 40740876  T
Q  468 tc 469  Q
    ||    
T  40740875 tc 40740874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 42482378 - 42482317
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  42482378 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 42482317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 44727529 - 44727589
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacattt 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  |||||||||||||||    
T  44727529 cctcggtagttaactgcagccgttttt-tcaaacttcggcagttaattgccgaaggacattt 44727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 2e-79; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 110 - 409
Target Start/End: Original strand, 42539092 - 42539418
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttt-tatgacaattgttcgtttcc 208  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  42539092 atattttcatgacattttgttcgtttcgttgtattttcatgacatttgttactttgtttgtatttcgataacattttttttatgacaattgttcgtttcc 42539191  T
Q  209 gtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaa-----------acaatgtgtaaaaacacatgta 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           ||||||||||||||||||||||    
T  42539192 gtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgagttggcattgaaataatgtgtttacaatgtgtaaaaacacatgta 42539291  T
Q  298 acaagttctgc---------------cattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaa 382  Q
    ||| |||||||               |||||||||||||| |||||||| | |||||||||||||| ||||||||||||||| | ||||||||| || ||    
T  42539292 acaggttctgcctcaagaggttttgtcattttatggcttcgggacgcctcgacagttaactaccgaggaaaaatgaaaccggtggcagttaactaccaaa 42539391  T
Q  383 gaaaacctcggtagttaattgcagccg 409  Q
    |    |||||| |||||| ||||||||    
T  42539392 gttttcctcggcagttaactgcagccg 42539418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 110 - 500
Target Start/End: Original strand, 38971347 - 38971761
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| |  |||| ||||| ||||| ||||||||||||  ||  |||||  ||||| ||||||| ||||||||||||||||||||||     
T  38971347 atattttcatgacatttggc-cgtttcgttgtatttttatgacatttgttg-ttactttgt--ttcgacgacatatatttatgacaattgttcgtttcca 38971442  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgt-----------aaaaacacatgtaa 298  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||           ||||||||||||||    
T  38971443 tatcatattttcaatttcaattatgttgataattttctttgattgactttatgatttggctttaaaacaatgtgtttacaatgtgtaaaaacacatgtaa 38971542  T
Q  299 caagtt---------------ctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaag 383  Q
    || |||               ||||||||||||||||||||||| ||| |||||||||||| ||| ||||| ||||||||||| |||||||||| ||| |    
T  38971543 caggttatgcctcaagaggttctgccattttatggcttcaggactcctcggcagttaactatcgaggaaaattgaaaccggcggcagttaactgtcgagg 38971642  T
Q  384 aaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgtttcaacctaaccaaa 481  Q
    ||||| |||| |||||| |||||||| ||| ||||||||| || ||||| |||||||||| ||||||| ||||||| ||  |||| ||||||||||||||    
T  38971643 aaaacttcggcagttaactgcagccggtttccacaaaattcgggagttaactgccgaagggcatttaggtaaattagtcgtgtgtctcaacctaaccaaa 38971742  T
Q  482 tgtgtcagcaacaattctc 500  Q
    ||||||| |||||||||||    
T  38971743 tgtgtcaacaacaattctc 38971761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 110 - 500
Target Start/End: Complemental strand, 36503422 - 36503008
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| |  |||| ||||| ||||||||||||||||||  ||  |||||  ||||| ||||||| |||||| ||||||||| ||||||    
T  36503422 atattttcatgacatttggc-cgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcgacgacatatatttatggcaattgttcatttccg 36503327  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaat-----------gtgtaaaaacacatgtaa 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||    
T  36503326 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtttacaatgtgtaaaaacacatgtaa 36503227  T
Q  299 c---------------aagttctgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaag 383  Q
    |               | ||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||      
T  36503226 caggttctgcctcaagaggttctgccattttatggtttcaggacgcctcgacagttaactaccgaggaaaaatgaaaccggcggcagttaactgccgaga 36503127  T
Q  384 aaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc--aacctaaccaaa 481  Q
    ||||||||||||||||| |||||||  | | ||||||||| | || ||  |||| ||||||||||||| |||||||||||||| ||  |  | |||||||    
T  36503126 aaaacctcggtagttaactgcagccaatatccacaaaattcgacaattgactgcagaaggacatttaggtaaattactcgtgtgtcttagtcaaaccaaa 36503027  T
Q  482 tgtgtcagcaacaattctc 500  Q
    ||| ||| |||||||||||    
T  36503026 tgtatcaacaacaattctc 36503008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 110 - 282
Target Start/End: Original strand, 15939947 - 15940115
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| |  |||| ||||| ||||||||||||||||||  ||  |||||  |||||||||||||||||||||||||| ||||||||||    
T  15939947 atattttcatgacattt-gaccgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcgatgacatatttttatgacaatttttcgtttccg 15940042  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  15940043 tatcatattttcaatttcaattatgttggtaattttctttgattaactttatgatttggcattgaaataatgt 15940115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 38971217 - 38971315
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||||| |||| | |||||||||| ||  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38971217 gttagggagcagatcgcgccgatcttgaccaagaggcgaggccaaaggccgaggaggaggcacgagcagcatcagcaggaccaggagtagtaatatttt 38971315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 514 - 688
Target Start/End: Complemental strand, 20888612 - 20888440
Alignment:
Q  514 cttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacata 612  Q
    ||||||||||||||||||||||| ||||| |||||||  ||| ||||||||| | ||||| |  | ||||||| |||| | | ||| |||||||||||||    
T  20888612 cttcatccaccattttattcttatataatacgttaatcatgacattgtagctatcaacattataagtcactccccttcaaaccatattgttgaatacata 20888513  T
Q  613 tgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccaca 688  Q
    |||||| ||| |||  ||||||||||||||||| |||   ||||||||| ||||||||||||||||||||| ||||    
T  20888512 tgtggctttggtcacatctttaaccaagaaataccca---attaaagaactataagtaacaacattaggtttcaca 20888440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 5199943 - 5200027
Alignment:
Q  19 ttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    ||||||||| |||| | |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5199943 ttagggagcagatcgcgccgatcttgaccaggaggcgaagccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 5200027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 511503 - 511414
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtag 107  Q
    |||||||||  |||| |||||||||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  511503 gttagggagtagatcgcaccgatcttgaccaggaggcgaggccaaaggccgaggaggtggcaccagcagcatcagcagaaccaggagtag 511414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 15939817 - 15939908
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    |||||||||| |||| | ||||| |||  ||| |||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  15939817 gttagggagcagatcgcgccgatattggtcaggaggcgaggccagaggccgaggaggcggcaccagcaacatcagcaacaccaggagtagta 15939908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 368 - 500
Target Start/End: Original strand, 38408471 - 38408605
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    |||||||||||||| |||| |||||| |||||| ||| | || |||||  ||| || ||||||||  ||||||||| ||||||| ||||||||||  |||    
T  38408471 cagttaactgccgaggaaatcctcgggagttaactgccgtcggttttctaaaacttcggcagttaattgccgaagggcatttaggtaaattactcgtgtg 38408570  T
Q  466 tttcaacctaaccaaatgtgtcagcaacaattctc 500  Q
    | ||| || |||||||||||||| |||||||||||    
T  38408571 tctcagccaaaccaaatgtgtcaacaacaattctc 38408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 358 - 440
Target Start/End: Original strand, 42937216 - 42937298
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccga 440  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||| |||| |||||| ||  || |||||||| |||||||    
T  42937216 aaaccggcggcagttaactgccgaagaaatcctcggtagttaagtgccgccggttttcaaaattttcggcagttaactgccga 42937298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 40622853 - 40622801
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  40622853 aggcaaggccagaggccgaggaggaggcaccaacaacatcagcaggaccagga 40622801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 7761730 - 7761787
Alignment:
Q  23 ggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcac 80  Q
    ||||| |||| ||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  7761730 ggagcagatcgcaccgattttgaccaggaggcgaggccagaggccgaggaggaggcac 7761787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 8535 - 8447
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||| | ||||| |||| ||| ||||||| |||||||||||||||||||||||| |||||  | |||||| || |||||||    
T  8535 agggagcagatcgcgccgattttgaccaggaggcgagcccagaggccgaggaggaggcaccatcagcaggatcaggactagtagtagta 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 500
Target Start/End: Original strand, 5200363 - 5200494
Alignment:
Q  371 ttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc- 469  Q
    ||||||||||| |||| |||||| |||||| |||||||| |||||  ||| || | |||||| || |||| | |||||||| ||||||||| |||| ||     
T  5200363 ttaactgccgaggaaatcctcgggagttaactgcagccgattttctaaaacttcgacagttaactaccgatgaacatttaggtaaattacttgtgtgtct 5200462  T
Q  470 -aacctaaccaaatgtgtcagcaacaattctc 500  Q
     |||| |||||||||| ||| || ||||||||    
T  5200463 taaccaaaccaaatgtatcaacatcaattctc 5200494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 8699272 - 8699237
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcag 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  8699272 aggcgaggccagaggccgaggaggaggcaccagcag 8699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 14280950 - 14280907
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  14280950 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 14280907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 28238162 - 28238205
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  28238162 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 28238205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 488
Target Start/End: Complemental strand, 35564330 - 35564208
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||| |||| ||||||||||| | |||| |||||| | ||    ||||||| |||||||| ||||||||| | ||||   |||||||||||||||    
T  35564330 cagttaactaccgaggaaaacctcggcaattaactgcagctggttccttcaaaattcggcagttaactgccgaagaatatttgagtaaattactcgtgtt 35564231  T
Q  468 --tcaacctaaccaaatgtgtca 488  Q
      |||||| ||||||||||||||    
T  35564230 tctcaaccaaaccaaatgtgtca 35564208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 38855761 - 38855718
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  38855761 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 38855718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 42937327 - 42937280
Alignment:
Q  302 gttctgccattttatggcttcaggacgccttggcagttaactaccgaa 349  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  42937327 gttctgccattttatggcttcaggaagcctcggcagttaactgccgaa 42937280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 13837748 - 13837790
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  13837748 aaaccggcggcagttaactgccgaggaaaacctcggtagttaa 13837790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 29430022 - 29430088
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||| ||||||| ||||||||  ||||||| |||||| ||||||||||| ||||||    
T  29430022 gcagttaactgccgaggaaaaataaaaccggctgcagttaagtgccgaggaaaacctcggcagttaa 29430088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 400
Target Start/End: Complemental strand, 29430651 - 29430585
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||| ||||||| ||||||||  ||||||||||| || ||||||||||| ||||||    
T  29430651 gcagttaactgccgaggaaaaataaaaccggctgcagttaactgctgaggaaaacctcggcagttaa 29430585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 42539006 - 42539060
Alignment:
Q  62 gaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||| ||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  42539006 gaggtcgaggaggaggcaccagcagcatcaacaggactaagagtagtagtatttt 42539060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 38407723 - 38407662
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||||||||||| ||||||||||||||||||||    
T  38407723 agggagcagatcgcgccgattttgaccaggaggcgaggccataggccgaggaggaggcacca 38407662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 8577008 - 8577040
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||||||||||||||||||||||||||    
T  8577008 cagttaactgccgaagaaaacctcggtagttaa 8577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 5197056 - 5196978
Alignment:
Q  425 ggcagttatctgccgaaggacatttagataaattactcgtgtttc--aacctaaccaaatgtgtcagcaacaattctca 501  Q
    |||||||| ||||||| || |||||||||||||||||||||| ||  | |  |||| ||||||||| ||||||||||||    
T  5197056 ggcagttaactgccgaggggcatttagataaattactcgtgtgtctcagcgaaacctaatgtgtcaacaacaattctca 5196978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 19041167 - 19041124
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||    
T  19041167 gaaatcggcggcagttagctgccgaagaaaacctcggtagttaa 19041124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 28879783 - 28879850
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||| |||||    
T  28879783 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcaccatcagca 28879850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 399
Target Start/End: Original strand, 41798852 - 41798883
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagtta 399  Q
    ||||||||||||||||||||||||||||||||    
T  41798852 cagttaactgccgaagaaaacctcggtagtta 41798883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 42098303 - 42098362
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcgg 393  Q
    |||||||||| |||| ||||||| |||| |||  |||||||||||||| |||||||||||    
T  42098303 gcagttaactgccgaggaaaaataaaactggctgcagttaactgccgaggaaaacctcgg 42098362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 30705205 - 30705107
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttc-acaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    ||||||||||||| |||| ||||||||||||| ||| |||| ||| | | ||| || |||||||| |||| ||||| ||||||  ||||| ||||||||    
T  30705205 agttaactgccgaggaaatcctcggtagttaactgccgccggtttactaaaaacttcggcagttaactgctgaagggcatttacgtaaatgactcgtgt 30705107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 37814606 - 37814648
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| |||||||| |||||||||    
T  37814606 aaaccggcggcagttaactgccgaggaaaaccttggtagttaa 37814648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 39742575 - 39742641
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||| ||||||| |||||| |  |||||||||||||| ||||||||| | ||||||    
T  39742575 gcagttaactgccgaggaaaaataaaaccgactgcagttaactgccgaggaaaacctcagcagttaa 39742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 506
Target Start/End: Original strand, 14687 - 14807
Alignment:
Q  388 cctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt--ttcaacctaaccaaatgtg 485  Q
    |||||| |||||| | ||||||| ||||  ||| || |||||||| ||||||||||||||||   ||| ||||||||||    |||||| | ||||||||    
T  14687 cctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtggcacaaccttatcaaatgtg 14786  T
Q  486 tcagcaacaattctcattcat 506  Q
    | | || ||||||||||||||    
T  14787 taaacagcaattctcattcat 14807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 8577396 - 8577323
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||| |||| ||| ||||||| ||| |||||||||||||||||||| |||||  | ||||||| | |||||||    
T  8577396 ccgattttgaccaggaggcgagcccaaaggccgaggaggaggcaccatcagcaggatcaggaccggtagtagta 8577323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 302 - 331
Target Start/End: Original strand, 15940228 - 15940257
Alignment:
Q  302 gttctgccattttatggcttcaggacgcct 331  Q
    ||||||||||||||||||||||||||||||    
T  15940228 gttctgccattttatggcttcaggacgcct 15940257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 35926387 - 35926428
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||| |||||||||| |||| ||||||||||||||||||    
T  35926387 aaccggctacagttaactaccgaggaaaacctcggtagttaa 35926428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 41201753 - 41201794
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||  |||||||||||||| ||||||||||||||||||    
T  41201753 aaccggctgcagttaactgccgaggaaaacctcggtagttaa 41201794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 42937419 - 42937370
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgtt 159  Q
    |||||||||||||||||||||||||  |||| || |||||||||| ||||    
T  42937419 atattttcatgacattttgttcgttatgttgtatattcatgacatgtgtt 42937370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 42937504 - 42937467
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagca 88  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  42937504 aggcgaggccagaggctgaggaggaggcaccatcagca 42937467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 1e-59; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 110 - 380
Target Start/End: Original strand, 7417091 - 7417379
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    |||||||||||| |||| |  |||| ||||| ||||||||||||||||||  ||  |||||  ||||||||||||| ||||||| ||||||||||||||     
T  7417091 atattttcatgatatttggc-cgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcgatgacatatatttatgataattgttcgtttcca 7417186  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaa-----------acaatgtgtaaaaacacatgtaa 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||    
T  7417187 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgtgtttacaatgtgtaaaaacacatgtaa 7417286  T
Q  299 caagttc-----------tgccattttatggcttcaggacgccttggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccg 380  Q
    || ||||           |||||||||||||||||||||||||| | |||||||||||||| ||||||||||| | ||| |||||||||||||    
T  7417287 caggttctgcctaggttatgccattttatggcttcaggacgcctcgacagttaactaccgaggaaaaatgaaagcagcggcagttaactgccg 7417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 110 - 282
Target Start/End: Complemental strand, 25514808 - 25514641
Alignment:
Q  110 atattttcatgacattttgttcgttccgttgcattttcatgacatttgttactttgtttgtatttcgatgacatatttttatgacaattgttcgtttccg 209  Q
    ||||||||||||||||| |  |||| ||||| ||||||||||||||||||  ||  |||||  ||| |||||||||||||||||||||||||||||||||    
T  25514808 atattttcatgacatttggc-cgtttcgttgtattttcatgacatttgttg-ttactttgt--ttcaatgacatatttttatgacaattgttcgtttccg 25514713  T
Q  210 tatcatattttcaatttcaattatgttggtaattttctttgattgactttatgatttggcattgaaacaatgt 282  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25514712 tatcatattttcaatttcaattatgttggtaa-tttctttgattaactttatgatttggcattgaaacaatgt 25514641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 15546988 - 15547105
Alignment:
Q  167 ttgtatttcgatgacatatttttatgacaattgttcgtttccgtatcatattttcaatttcaattatgttggtaattttctttgattgactttatgattt 266  Q
    |||||||||||||||| |||| ||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||| | || ||| | ||||| ||||    
T  15546988 ttgtatttcgatgacacatttctatgacaattgttggttttcgtatcaaattttcaatttaaattatgttggtaatttccgtttattaaatttattattt 15547087  T
Q  267 ggcattgaaacaatgtgt 284  Q
    ||||||||||||||||||    
T  15547088 ggcattgaaacaatgtgt 15547105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 6637602 - 6637470
Alignment:
Q  369 agttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtgt 466  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||| |||||| || |||||||| || |||| |||| ||||| ||||||||||  ||||    
T  6637602 agttaactgccaaggaaaacctcggtagttaactgcagccggtttccacaaacttcggcagttaactaccgagggacgtttaggtaaattactcgtgtgt 6637503  T
Q  467 ttcaacctaaccaaatgtgtcagcaacaattct 499  Q
     |||  ||||||||||||||||  |||||||||    
T  6637502 ctcagtctaaccaaatgtgtcaagaacaattct 6637470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 6637967 - 6637882
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||||| |||| | ||||| |||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6637967 gttagggagcagatcgcgccgatattgaccaggaggggagaccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 6637882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 40538704 - 40538789
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||| ||| |||| |||||||| | | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40538704 gttaggcagcagatcgcaccgatcattaccagtaggcgaggccagaggccgaggaggaggcaccagcagcataagcaggaccagga 40538789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 579 - 677
Target Start/End: Original strand, 32760415 - 32760513
Alignment:
Q  579 tcactccacttcgagcaatagtgttgaatacatatgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacat 677  Q
    ||||||| ||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||| |||||| | |||||| ||||| | |||||||    
T  32760415 tcactccccttcgagcaatagtgttaaatacatatttggtcttgttcacttccttaaccaagaaatacccatccgtcaaagaattataaatgacaacat 32760513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 7416994 - 7417059
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||||    
T  7416994 aggcgaggccagaggccgaggaggaggcaccaacaacatcagtaggaccaggagtagtagtatttt 7417059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 36653351 - 36653303
Alignment:
Q  38 gatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcag 86  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  36653351 gatcttgaccaggaggcgaggctagaggccgaggaggaggcaccagcag 36653303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 466
Target Start/End: Complemental strand, 3086118 - 3086007
Alignment:
Q  355 atgaaaccggcgacagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagata 454  Q
    ||||||||||| |||||||||||| || |||||| |||| |||||| | ||||||| ||||  ||| || |||||||| ||||||| | ||||||   ||    
T  3086118 atgaaaccggctacagttaactgctgaggaaaacttcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaggaacatttgagta 3086019  T
Q  455 aattactcgtgt 466  Q
    | ||||||||||    
T  3086018 atttactcgtgt 3086007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 18000255 - 18000298
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  18000255 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 18000298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 22003451 - 22003408
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  22003451 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 22003408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 28468664 - 28468707
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  28468664 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 28468707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 30273196 - 30273153
Alignment:
Q  361 ccggcgacagttaactgccgaagaaaacctcggtagttaattgc 404  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  30273196 ccggctacagttaactgccgaggaaaacctcggtagttaattgc 30273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 39950673 - 39950744
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcag 92  Q
    ||||||| |||| | ||||| |||| ||| ||||||  |||||||||||||||||||||||||||| |||||    
T  39950673 agggagcagatcgcgccgattttgaccaggaggcgaacccagaggccgaggaggaggcaccagcaggatcag 39950744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 41564542 - 41564499
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  41564542 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 41564499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 44100848 - 44100805
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  44100848 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 44100805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 14456502 - 14456568
Alignment:
Q  334 gcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| ||||  |||||| ||||||||  |||||||||||||| ||||||||||| ||||||    
T  14456502 gcagttaactgccgagcaaaaataaaaccggctgcagttaactgccgaggaaaacctcggcagttaa 14456568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 615 - 677
Target Start/End: Original strand, 15063100 - 15063162
Alignment:
Q  615 tggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacat 677  Q
    |||||||||||| || |||||| ||| |||| ||||||||||||||  |||||||||||||||    
T  15063100 tggccttgttcacttgtttaactaagcaatatccatccattaaagagttataagtaacaacat 15063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 45475464 - 45475506
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  45475464 aaaccggctacagttaactgccgaggaaaacctcggtagttaa 45475506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 22443532 - 22443581
Alignment:
Q  333 ggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaa 382  Q
    ||||||||| |||||| |||||| |||| |||||||||||||||||||||    
T  22443532 ggcagttaagtaccgaggaaaaacgaaatcggcgacagttaactgccgaa 22443581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 29398462 - 29398389
Alignment:
Q  36 ccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||| |||| ||| ||| |||||||||||||||||||||||||||| |||||  | ||||| ||| |||||||    
T  29398462 ccgattttgaccaggaggtgaggccagaggccgaggaggaggcaccatcagcaggaccaggatcagtagtagta 29398389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 43536127 - 43536168
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  43536127 aaccgacgacagttaactgccgaggaaaacctcggtagttaa 43536168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 400
Target Start/End: Complemental strand, 25184881 - 25184837
Alignment:
Q  356 tgaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||    
T  25184881 tgaaaccggctgcagttaactgccgaggaaaacctcggtagttaa 25184837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 39947623 - 39947671
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaattgcag 406  Q
    ||||||||| |||||||||||||| |||||| ||||||||||| |||||    
T  39947623 aaaccggcggcagttaactgccgaggaaaacttcggtagttaactgcag 39947671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 5351782 - 5351739
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||    
T  5351782 gaaaccggcggtagttaactgccgaggaaaacctcggtagttaa 5351739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 7417411 - 7417364
Alignment:
Q  333 ggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccg 380  Q
    ||||||||||||||||  ||||||||||||| || |||||||||||||    
T  7417411 ggcagttaactaccgagaaaaaatgaaaccgacggcagttaactgccg 7417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 488
Target Start/End: Complemental strand, 36652975 - 36652853
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactc--gtg 465  Q
    ||||| ||||| || |||| ||||| ||||||| |||| ||| |||||  ||| || | |||||| ||||||| |||||||||  ||||||||||  |||    
T  36652975 cagtttactgctgaggaaatcctcgatagttaactgcatccggttttctaaaacttcgacagttaactgccgatggacatttaagtaaattactcgtgtg 36652876  T
Q  466 tttcaacctaaccaaatgtgtca 488  Q
    | ||| || ||||||||||||||    
T  36652875 tctcagccaaaccaaatgtgtca 36652853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 43258759 - 43258818
Alignment:
Q  390 tcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacattt 449  Q
    ||||||||||| |||||||| ||||  |||| || |||||||| ||||||||||||||||    
T  43258759 tcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaaggacattt 43258818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 2917707 - 2917749
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||    
T  2917707 aaaccggctacagttaactgccgaggaaaacctcagtagttaa 2917749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 25514929 - 25514840
Alignment:
Q  18 gttagggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagtaatatttt 116  Q
    |||| ||||| |||| | ||||| |||  ||| ||||||||||||||||||||||||         |||||||||||||||||||||||||| ||||||    
T  25514929 gttatggagcagatcgcgccgatattggccaggaggcgaggccagaggccgaggagg---------cagcatcagcaggaccaggagtagtagtatttt 25514840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 28471745 - 28471803
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccaggagtagta 109  Q
    ||||||| |||||||||||||||||||||||| |||||  |  |||||||| |||||||    
T  28471745 aggcgagcccagaggccgaggaggaggcaccatcagcaggattaggaccagtagtagta 28471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 29401609 - 29401707
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||||||||||||| ||||  ||||| |||||| ||| |||| |||||  ||| || | |||||| ||||||| || ||||||  ||||||||||||||    
T  29401609 cagttaactgccgaggaaattctcgggagttaactgccgccggttttctaaaacttcgacagttaactgccgaggggcatttaagtaaattactcgtgt 29401707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 426 - 468
Target Start/End: Original strand, 29601207 - 29601249
Alignment:
Q  426 gcagttatctgccgaaggacatttagataaattactcgtgttt 468  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||    
T  29601207 gcagttaactgccgaaggatatttggataaattactcgtgttt 29601249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 33002362 - 33002408
Alignment:
Q  420 aatttggcagttatctgccgaaggacatttagataaattactcgtgt 466  Q
    |||| |||||||| || ||||||||||||| ||||||||||||||||    
T  33002362 aattcggcagttaactaccgaaggacatttcgataaattactcgtgt 33002408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 3938411 - 3938350
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  3938411 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 3938350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 15834441 - 15834502
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  15834441 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 15834502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 401
Target Start/End: Original strand, 25964845 - 25964878
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaat 401  Q
    |||||||||||||| |||||||||||||||||||    
T  25964845 cagttaactgccgaggaaaacctcggtagttaat 25964878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 29407041 - 29406940
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgcagccgtttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtt 467  Q
    ||||||||||||||||    |||||| ||||||||||||||| || |   ||| || |||||||| ||||||||||  || | | |||||||||||||||    
T  29407041 cagttaactgccgaagttttcctcggcagttaattgcagccggttctttaaaatttcggcagttaactgccgaagggtatctgggtaaattactcgtgtt 29406942  T
Q  468 tc 469  Q
    ||    
T  29406941 tc 29406940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 30493833 - 30493772
Alignment:
Q  21 agggagcggatcacaccgatcttgagcagaaggcgaggccagaggccgaggaggaggcacca 82  Q
    ||||||| |||| | ||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  30493833 agggagcagatcgcgccgattttgaccaggaggagagcccagaggccgaggaggaggcacca 30493772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 38340867 - 38340814
Alignment:
Q  333 ggcagttaactaccgaagaaaaatgaaaccggcgacagttaactgccgaagaaa 386  Q
    |||||| ||||||||||||||| ||||| |  ||||||||||||||||| ||||    
T  38340867 ggcagtaaactaccgaagaaaactgaaaacttcgacagttaactgccgaggaaa 38340814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 88; Significance: 9e-42; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 512 - 706
Target Start/End: Original strand, 43989 - 44184
Alignment:
Q  512 tgcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaataca 610  Q
    |||||||||||||||||||||||| || ||| |||||||  | | | ||||||| ||||||| | ||  |||||| |||| |||||||||||||||||||    
T  43989 tgcttcatccaccattttattcttgcaaaatccgttaatcataacactgtagctctgaacatcaagagccactccccttctagcaatagtgttgaataca 44088  T
Q  611 tatgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggttccacaacttgtcttatcataaca 706  Q
    |||||||||||||||| |||||||||| ||||| | ||||||||||||||| |||||||| ||| ||| ||||||||  ||||| |||||||||||    
T  44089 tatgtggccttgttcacttctttaaccgagaaacacccatccattaaagaactataagtagcaatattgggttccacgccttgttttatcataaca 44184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 12562 - 12614
Alignment:
Q  51 aggcgaggccagaggccgaggaggaggcaccagcagcatcagcaggaccagga 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  12562 aggcgagggcagaggccgaggaggaggcaccagcagcatcagcacgaccagga 12614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 18932 - 19023
Alignment:
Q  411 ttttcacaaaatttggcagttatctgccgaaggacatttagataaattactcgtgtttc--aacctaaccaaatgtgtcagcaacaattctc 500  Q
    |||||||||| ||||| ||||| ||||| |||| ||||||| ||||||||| |||| ||  | ||||||||||||||||| || ||||||||    
T  18932 ttttcacaaactttggaagttaactgccaaagggcatttaggtaaattactagtgtgtctcagcctaaccaaatgtgtcaacatcaattctc 19023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 473 - 430
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  473 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 5354 - 5397
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  5354 gaaaccggcggcagttaactgccgaggaaaacctcggtagttaa 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 617 - 683
Target Start/End: Complemental strand, 3910 - 3844
Alignment:
Q  617 gccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacattaggtt 683  Q
    |||||||||| ||||||||| | | |||| ||||||||||||||  ||||||||||||| |||||||    
T  3910 gccttgttcacttctttaacaaggcaatatccatccattaaagagctataagtaacaacgttaggtt 3844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 50072 - 50113
Alignment:
Q  359 aaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  50072 aaccggcggcagttaactgccgaggaaaacctcggtagttaa 50113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 513 - 677
Target Start/End: Complemental strand, 137252 - 137087
Alignment:
Q  513 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 611  Q
    |||||||  ||||||||| ||||||| ||| | |||||  ||||||| ||||| ||| ||| ||||  ||||||  |||||||||||||| | || ||||    
T  137252 gcttcattgaccattttaatcttacagaatccattaatcatgatattatagctctgagcatcaggagccactcccattcgagcaatagtgcttaaaacat 137153  T
Q  612 atgtggccttgttcaattctttaaccaagaaataaccatccattaaagaagtataagtaacaacat 677  Q
     | ||||||| |||| ||| ||||| | | |||| ||||||||||| ||| | || ||||||||||    
T  137152 gtttggccttattcacttcattaactaggcaatacccatccattaatgaattgtatgtaacaacat 137087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 3919 - 3955
Alignment:
Q  368 cagttaactgccgaagaaaacctcggtagttaattgc 404  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3919 cagttaactgccgaggaaaacctcggtagttaattgc 3955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 427 - 502
Target Start/End: Original strand, 1676 - 1752
Alignment:
Q  427 cagttatctgccgaaggacatttagataaattactcgtgtttc-aacctaaccaaatgtgtcagcaacaattctcat 502  Q
    |||||| |||||||| || ||||| |||||||||||||||||| | || |||||||||||| | || ||||||||||    
T  1676 cagttaactgccgaaagatatttaaataaattactcgtgtttctagccaaaccaaatgtgtaaacatcaattctcat 1752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Original strand, 235930 - 235970
Alignment:
Q  365 cgacagttaactgccgaagaaaacctcggtagttaattgca 405  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  235930 cgacagttaactgccgaggaaaacctcggtagttaactgca 235970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 772 - 729
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||| | ||||||||||||||||||    
T  772 gaaaccggcggcagttaactgcccaggaaaacctcggtagttaa 729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 41072 - 41029
Alignment:
Q  357 gaaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  41072 gaaaccggcggcagttaactgccgaggaaaacctcgggagttaa 41029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 10676 - 10718
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| | ||||||||||||||||    
T  10676 aaaccggcggcagttaactgccgagggaaacctcggtagttaa 10718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 15671 - 15629
Alignment:
Q  358 aaaccggcgacagttaactgccgaagaaaacctcggtagttaa 400  Q
    ||||||||| |||||||||||||| |||||||| |||||||||    
T  15671 aaaccggcggcagttaactgccgaggaaaaccttggtagttaa 15629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University