View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11626_low_5 (Length: 643)

Name: NF11626_low_5
Description: NF11626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11626_low_5
NF11626_low_5
[»] chr1 (26 HSPs)
chr1 (1-553)||(5283244-5283796)
chr1 (3-278)||(47644786-47645060)
chr1 (217-282)||(38106319-38106384)
chr1 (192-283)||(9982799-9982890)
chr1 (481-548)||(33260072-33260139)
chr1 (481-548)||(33280231-33280298)
chr1 (41-103)||(8880374-8880436)
chr1 (192-282)||(20774655-20774745)
chr1 (39-135)||(42729013-42729109)
chr1 (192-282)||(29936511-29936601)
chr1 (39-145)||(36421690-36421796)
chr1 (206-282)||(3627907-3627983)
chr1 (496-548)||(33014891-33014943)
chr1 (303-354)||(16036481-16036532)
chr1 (241-280)||(29871198-29871237)
chr1 (114-180)||(16903522-16903588)
chr1 (192-282)||(23968668-23968758)
chr1 (39-145)||(39219182-39219288)
chr1 (217-282)||(12495124-12495189)
chr1 (217-282)||(17135061-17135126)
chr1 (213-278)||(25154778-25154843)
chr1 (225-282)||(28298068-28298125)
chr1 (217-282)||(34673192-34673257)
chr1 (48-141)||(48125746-48125839)
chr1 (195-259)||(2514850-2514914)
chr1 (206-282)||(24236671-24236747)
[»] chr4 (33 HSPs)
chr4 (479-553)||(7319637-7319711)
chr4 (478-534)||(11772883-11772939)
chr4 (192-283)||(11122779-11122870)
chr4 (43-286)||(25298752-25298994)
chr4 (175-282)||(39188579-39188686)
chr4 (216-282)||(36919241-36919307)
chr4 (479-548)||(29133565-29133634)
chr4 (40-152)||(33516125-33516237)
chr4 (479-546)||(12079285-12079351)
chr4 (2-152)||(4741269-4741418)
chr4 (192-282)||(42299882-42299972)
chr4 (206-283)||(11028181-11028258)
chr4 (192-285)||(26564925-26565018)
chr4 (310-442)||(2820676-2820808)
chr4 (48-160)||(12505575-12505687)
chr4 (38-133)||(21714047-21714142)
chr4 (192-282)||(21423955-21424045)
chr4 (39-144)||(8843866-8843970)
chr4 (39-144)||(8856830-8856934)
chr4 (39-108)||(36919052-36919121)
chr4 (217-282)||(55826534-55826599)
chr4 (233-279)||(425897-425943)
chr4 (39-145)||(12075691-12075797)
chr4 (192-282)||(15987173-15987263)
chr4 (192-282)||(19882967-19883057)
chr4 (225-283)||(37349239-37349297)
chr4 (40-102)||(37384203-37384265)
chr4 (39-103)||(7334287-7334349)
chr4 (225-278)||(7609097-7609150)
chr4 (225-278)||(19548853-19548906)
chr4 (232-281)||(33615241-33615290)
chr4 (43-160)||(42907820-42907936)
chr4 (190-278)||(16575192-16575280)
[»] chr5 (21 HSPs)
chr5 (479-548)||(23877956-23878025)
chr5 (38-279)||(6810080-6810321)
chr5 (48-145)||(29664903-29665000)
chr5 (192-282)||(35311901-35311991)
chr5 (38-135)||(12457439-12457536)
chr5 (206-283)||(13401914-13401991)
chr5 (186-283)||(35193911-35194008)
chr5 (218-282)||(12447482-12447546)
chr5 (231-283)||(18451833-18451885)
chr5 (71-153)||(18451937-18452019)
chr5 (196-282)||(33727912-33727998)
chr5 (206-283)||(15890308-15890385)
chr5 (225-282)||(18207139-18207196)
chr5 (206-282)||(4920928-4921004)
chr5 (39-182)||(27900424-27900567)
chr5 (312-442)||(37537018-37537148)
chr5 (195-285)||(6369786-6369876)
chr5 (206-272)||(42717551-42717617)
chr5 (233-282)||(35584244-35584293)
chr5 (49-145)||(16311353-16311448)
chr5 (49-145)||(38972855-38972951)
[»] chr3 (19 HSPs)
chr3 (479-548)||(1709724-1709793)
chr3 (479-548)||(20797809-20797878)
chr3 (485-549)||(20367252-20367316)
chr3 (192-283)||(4557214-4557305)
chr3 (479-542)||(25132806-25132869)
chr3 (192-283)||(29284424-29284515)
chr3 (38-103)||(772895-772959)
chr3 (192-284)||(39655181-39655273)
chr3 (192-282)||(39728759-39728849)
chr3 (312-442)||(39774905-39775035)
chr3 (225-284)||(44639395-44639454)
chr3 (192-282)||(7469688-7469778)
chr3 (404-442)||(7570295-7570333)
chr3 (192-282)||(19111822-19111912)
chr3 (479-533)||(23921490-23921544)
chr3 (43-145)||(30904874-30904976)
chr3 (499-548)||(26375569-26375618)
chr3 (217-282)||(29858485-29858550)
chr3 (512-548)||(14607782-14607818)
[»] chr7 (25 HSPs)
chr7 (192-287)||(44985823-44985918)
chr7 (41-282)||(19439932-19440174)
chr7 (175-282)||(24425444-24425551)
chr7 (192-282)||(17851945-17852035)
chr7 (41-282)||(23533526-23533768)
chr7 (175-283)||(3920602-3920707)
chr7 (192-281)||(7780101-7780190)
chr7 (503-548)||(34792048-34792093)
chr7 (479-543)||(9095741-9095805)
chr7 (41-160)||(23475307-23475427)
chr7 (206-282)||(26004396-26004472)
chr7 (192-283)||(21702752-21702843)
chr7 (1-103)||(6557827-6557929)
chr7 (192-282)||(27850242-27850332)
chr7 (192-282)||(37218098-37218188)
chr7 (206-283)||(24753270-24753347)
chr7 (225-282)||(30650757-30650814)
chr7 (225-282)||(44734269-44734326)
chr7 (304-442)||(15973600-15973739)
chr7 (225-296)||(5431916-5431989)
chr7 (225-283)||(16866295-16866353)
chr7 (217-285)||(3226853-3226921)
chr7 (406-442)||(4580445-4580481)
chr7 (230-282)||(35074601-35074653)
chr7 (247-283)||(38082188-38082224)
[»] chr8 (23 HSPs)
chr8 (205-282)||(36131839-36131916)
chr8 (32-152)||(17108292-17108412)
chr8 (124-278)||(33631825-33631979)
chr8 (192-284)||(2075742-2075834)
chr8 (114-282)||(17469253-17469421)
chr8 (192-282)||(27777108-27777198)
chr8 (192-282)||(29416097-29416187)
chr8 (39-145)||(29918530-29918636)
chr8 (192-282)||(34777148-34777238)
chr8 (232-285)||(1063641-1063694)
chr8 (3-108)||(5793472-5793577)
chr8 (39-168)||(9476049-9476178)
chr8 (39-160)||(30903969-30904090)
chr8 (39-152)||(36274966-36275078)
chr8 (192-283)||(27932501-27932593)
chr8 (38-186)||(39379598-39379744)
chr8 (230-282)||(43113536-43113588)
chr8 (235-278)||(17084027-17084070)
chr8 (253-282)||(14186457-14186486)
chr8 (48-144)||(5700288-5700384)
chr8 (206-282)||(11254925-11255001)
chr8 (514-546)||(18187880-18187912)
chr8 (206-282)||(37960872-37960948)
[»] scaffold0014 (1 HSPs)
scaffold0014 (192-278)||(14098-14184)
[»] chr2 (19 HSPs)
chr2 (192-282)||(37106781-37106871)
chr2 (479-548)||(12807522-12807591)
chr2 (40-256)||(17845339-17845556)
chr2 (33-108)||(13531867-13531942)
chr2 (173-282)||(6027811-6027920)
chr2 (192-283)||(12341689-12341780)
chr2 (192-282)||(13705265-13705355)
chr2 (39-145)||(25210301-25210407)
chr2 (479-544)||(10289441-10289506)
chr2 (39-154)||(30696848-30696963)
chr2 (192-283)||(30847035-30847126)
chr2 (192-283)||(36128015-36128106)
chr2 (287-354)||(44630618-44630685)
chr2 (404-442)||(17968043-17968081)
chr2 (72-142)||(29656797-29656867)
chr2 (225-282)||(13830857-13830914)
chr2 (206-282)||(9632489-9632565)
chr2 (206-282)||(31942095-31942171)
chr2 (294-354)||(38592106-38592166)
[»] chr6 (14 HSPs)
chr6 (483-548)||(17110515-17110580)
chr6 (481-541)||(14362940-14363000)
chr6 (39-282)||(9402512-9402754)
chr6 (206-284)||(2367428-2367506)
chr6 (477-542)||(20497576-20497641)
chr6 (236-277)||(34345926-34345967)
chr6 (235-286)||(24225835-24225886)
chr6 (192-285)||(30986341-30986434)
chr6 (32-160)||(10925487-10925615)
chr6 (192-283)||(27534772-27534863)
chr6 (175-282)||(32959919-32960026)
chr6 (192-282)||(3483833-3483923)
chr6 (192-281)||(10187991-10188080)
chr6 (225-282)||(14506195-14506252)
[»] scaffold0157 (1 HSPs)
scaffold0157 (48-160)||(14790-14902)
[»] scaffold0054 (1 HSPs)
scaffold0054 (287-354)||(26300-26367)
[»] scaffold1322 (1 HSPs)
scaffold1322 (42-122)||(1037-1117)
[»] scaffold0519 (1 HSPs)
scaffold0519 (206-282)||(10392-10468)


Alignment Details
Target: chr1 (Bit Score: 485; Significance: 0; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 1 - 553
Target Start/End: Complemental strand, 5283796 - 5283244
Alignment:
Q  1 agagaagtgagtgtcgcctgacaaactgcggctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgat 100  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5283796 agagaagtgagtgtcgcctgacaaattgccactttgattgtgtgagagaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgat 5283697  T
Q  101 tttatacaatccagacgggtttaggtatgagttcgaggtgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaa 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||| ||||||||||||    
T  5283696 tttctacaatccagacgggtttaggtatgagttcgaggtgggtacttctatccccattacccgtcccgtactcatgttttgagatcaaagaatacccaaa 5283597  T
Q  201 ctctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaataatagaaaactcaat 300  Q
    |||  |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5283596 ctcagtcaaaccgaaaaaaatccatcaatttgggtttggctcggatgggtacccacgagtatgagttttgttgtcatgcctaaataataggaaactcaat 5283497  T
Q  301 tagattttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatatacacacaaaaattaacatttactacaatttttatcattatgggtac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5283496 tagattttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatatacacacaaaaattaacatttactacaatttttatcattatgggtac 5283397  T
Q  401 ataaaaattaaataccacgatataaacactactaatatgtgttaaatacctcaattggattctctatgttatataccgccaacctccttatccaaacaaa 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5283396 ataaaaattaaataccacgatataaacactactaatatgtgttaaatacctcaattggattctctatgttatataccgccaacctccttatccaaacaaa 5283297  T
Q  501 tggactctcaatcaatccaagaaattttcctattatcctcacacccacacaat 553  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5283296 tggactcccaatcaatccaagaaattttcctattatcctcacacccacacaat 5283244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 47645060 - 47644786
Alignment:
Q  3 agaagtgagtgtcgcctgacaaactgcggctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattt 102  Q
    |||||||| ||||| ||||||||||||| || || | ||| ||| |||||||||||   | |||||| ||||||||| ||||||||| |||||||  | |    
T  47645060 agaagtgaatgtcgtctgacaaactgcgactatgatcgtgggagtgaaatgatttaggatctgagtttctatttatataaaagggataataaattattat 47644961  T
Q  103 tatacaatccagacgggtttaggtatgagttcgaggtgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaact 202  Q
    | |||| ||  |||| || | | |||||||||| ||| |||||||||||| ||||||   |||||| ||   |||||||||||| | ||| ||||||||     
T  47644960 tttacattcgggacgagtatggatatgagttcggggtaggtacttctatc-ccattatccgtcccgtacctgtgttttgagatcggggaaaacccaaacc 47644862  T
Q  203 ctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
      |||||| ||  ||||| || ||||||| |||| |||||||  |||||||||| | | |||||||||||| ||||    
T  47644861 taatcaaagcgagaaaaacccgtcaatttaggttcggttcggtcgggtacccacaaatttgagttttgttgccatg 47644786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 38106319 - 38106384
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  38106319 aaaatccatcaaattgtgtttggttcggatgggtaaccatgagtatgagttttgttgccatgccta 38106384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 9982890 - 9982799
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| |||| |||||||||||| |||| ||||||||||  | ||| ||||| ||||||||||||||| |||||||||    
T  9982890 atacccaaacccagtcaaaacggagaaaatccatcaaattggatttggttcgggagagtaaccacgggtatgagttttgttgccatgcctaa 9982799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 548
Target Start/End: Complemental strand, 33260139 - 33260072
Alignment:
Q  481 aacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||||||| | ||||| |||||||| |||||| || | ||||||||||||||||||||||||||||    
T  33260139 aacctccttagcaaaacatatggactcccaatcagtctaggaaattttcctattatcctcacacccac 33260072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 548
Target Start/End: Complemental strand, 33280298 - 33280231
Alignment:
Q  481 aacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||||||| | ||||| |||||||| |||||| || | ||||||||||||||||||||||||||||    
T  33280298 aacctccttagcaaaacatatggactcccaatcagtctaggaaattttcctattatcctcacacccac 33280231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 8880374 - 8880436
Alignment:
Q  41 tgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgatttt 103  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||| | ||||||| |||||    
T  8880374 tgtgagtgaaatgatttaaagtttgagtttctatttataaaaaaggggtaataaatttatttt 8880436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 20774655 - 20774745
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||  ||||||| |||| |||||||||||||||  ||||| ||||||||||| ||||||||| ||||||||    
T  20774655 atacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatgccta 20774745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 42729109 - 42729013
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcg 135  Q
    |||||||| |||||||||||  || | |||| ||||||||| ||||||||||||||||| ||||| |||| ||   ||| |||| ||||||||||||    
T  42729109 tgtgtgagtgaaatgatttagtgtataagtttctatttatataaaagggatgataaatttattttctacattcagaacgtgtttgggtatgagttcg 42729013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 29936511 - 29936601
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||||   ||||| |||  |||| || |||| |||||||||||||||  ||||| ||||| ||||| ||||||||||||||||||    
T  29936511 atacccaaacttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgccta 29936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 36421690 - 36421796
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||  ||||||||||| |||| |||||  |||||||| || |||||| ||||||||||||| || | || ||||| |||| ||||| |||||| ||    
T  36421690 tgtgtgaatgaaatgatttagagttcgagtttttatttatataagagggataataaattgattttctatattcgagacgagtttgggtataagttcgggg 36421789  T
Q  139 tgggtac 145  Q
    || ||||    
T  36421790 tgagtac 36421796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 3627983 - 3627907
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||| |||||  |||||| ||| |||||||||||  ||||| || || ||||||||||||||||||||||||    
T  3627983 tcaaaacgggaaaaactcatcaaattgagtttggttcgggcgggtaaccgcgtgtatgagttttgttgtcatgccta 3627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 548
Target Start/End: Original strand, 33014891 - 33014943
Alignment:
Q  496 acaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||| ||||||||||||| ||||| ||||||| ||| ||||||||||||||    
T  33014891 acaaatagactctcaatcaacccaagtaattttcttatgatcctcacacccac 33014943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 16036481 - 16036532
Alignment:
Q  303 gattttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatat 354  Q
    |||| |||||||||||||||| || |||| ||||||||| ||||||||||||    
T  16036481 gattctcaatcttatcacaacaaacataacctaaaattatggaaagtgatat 16036532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 29871237 - 29871198
Alignment:
Q  241 tcggatgggtacccacgagtatgagttttgttgtcatgcc 280  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  29871237 tcggatggataaccacgagtatgagttttgttgtcatgcc 29871198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 16903522 - 16903588
Alignment:
Q  114 gacgggtttaggtatgagttcgaggtgggtacttctatctccattacatgtcccgcactcatgtttt 180  Q
    ||||||||| |||||||||||| ||||||||| | |||| ||||||| | ||||| |||| ||||||    
T  16903522 gacgggtttgggtatgagttcggggtgggtacctatatccccattacctatcccgtactcgtgtttt 16903588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 23968668 - 23968758
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| | ||||||  ||  ||||||| |||| |||||||||||||||  ||||| || || ||||| ||||||||| ||||||||    
T  23968668 atacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 23968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 39219182 - 39219288
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||  ||||||||| ||||||||| ||||| | | ||||||| ||||| |||| |    ||| |||| |||||| ||||| ||    
T  39219182 tgtgtgagcgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcgggg 39219281  T
Q  139 tgggtac 145  Q
    |||||||    
T  39219282 tgggtac 39219288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 12495124 - 12495189
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||| |||| |||| |||||||| | |||||| ||||  |||||| |||||||||||||||||    
T  12495124 aaaatccgtcaaattggatttggttcaggtgggtaaccacatgtatgaattttgttgtcatgccta 12495189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 17135061 - 17135126
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||| |||| |||||||||||||||  ||||| || || ||||| ||||||||| ||||||||    
T  17135061 aaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgccta 17135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 25154843 - 25154778
Alignment:
Q  213 ggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
    ||||||||||| | || ||||||||| ||| | ||| ||||| || ||||||||||||||||||||    
T  25154843 ggaaaaaatccgttaaattgggtttgattcaggtggatacccgcgtgtatgagttttgttgtcatg 25154778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 28298068 - 28298125
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| |||| |||||||||| |||||| |||||  |||||||||||||| ||||||||    
T  28298068 tcaaattggatttggttcgggtgggtaaccacggatatgagttttgttgacatgccta 28298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 34673257 - 34673192
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||| | || |||||||||||||||  |||||  |||  ||||||||||||||||||||||||    
T  34673257 aaaatccgttaaattgggtttggttcgggcgggtaatcactggtatgagttttgttgtcatgccta 34673192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 48125839 - 48125746
Alignment:
Q  48 gaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgg 141  Q
    ||||| ||||| |||||||||| ||||||||| ||||| | |  |||||||||||| |||| ||  |||| |||| |||||| ||||| |||||    
T  48125839 gaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtgg 48125746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 2514850 - 2514914
Alignment:
Q  195 cccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgag 259  Q
    ||||||| | |||||| |||  |||| ||||||| |||||||||||| ||| |||||||||||||    
T  2514850 cccaaacccaatcaaaacggggaaaacccatcaagttgggtttggtttggacgggtacccacgag 2514914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 24236747 - 24236671
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||| ||||| || |||| ||| |||||||||||  ||||| ||| | ||||||||||||||| ||||||||    
T  24236747 tcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggtatgagttttgttgccatgccta 24236671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 479 - 553
Target Start/End: Complemental strand, 7319711 - 7319637
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccacacaat 553  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  7319711 ccaacctccttatccaaacagatggactctcattcaatccaagaaattttcctagtatcctcacacctacacaat 7319637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 534
Target Start/End: Complemental strand, 11772939 - 11772883
Alignment:
Q  478 gccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctatt 534  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  11772939 gccaacctccttatccaaacaaatggactcctaatcaatccaagaaattttcctatt 11772883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 11122870 - 11122779
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||||||||||  ||||| |||||||||||| |||| ||| |||||||||||  ||||| ||||| ||||||||||||||| |||||||||    
T  11122870 atacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctaa 11122779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 286
Target Start/End: Complemental strand, 25298994 - 25298752
Alignment:
Q  43 tgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtggg 142  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||  ||| |    |||||||| |||||| ||||| |||||     
T  25298994 tgagtgaaatgatttagagtttgagttc-tatttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtgga 25298896  T
Q  143 tacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttc 242  Q
     |  | |||| |||||||   ||||| || | |||||||| ||| |  || |||||||| |  |||||  || |||||||| |||| |||  ||||| ||    
T  25298895 cagctatatccccattacccatcccgtacccgtgttttgaaatccggaaaaacccaaacccagtcaaagtgggaaaaatccgtcaaattgaatttgggtc 25298796  T
Q  243 ggatgggtacccacgagtatgagttttgttgtcatgcctaaata 286  Q
    ||  ||||| ||  ||||||||||||||||||||| ||||||||    
T  25298795 gggcgggtatccgtgagtatgagttttgttgtcatacctaaata 25298752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 39188579 - 39188686
Alignment:
Q  175 tgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgt 274  Q
    |||||| | ||||| ||| |||||||| | |||||| | ||||||| ||||||| |||||||| |||||||   ||| ||||| ||||||||||||||||    
T  39188579 tgttttaaaatcagggaaaacccaaacccaatcaaaacagaaaaaacccatcaaattgggtttagttcggacaagtaaccacgtgtatgagttttgttgt 39188678  T
Q  275 catgccta 282  Q
    ||||||||    
T  39188679 catgccta 39188686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 36919241 - 36919307
Alignment:
Q  216 aaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| || |||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  36919241 aaaaacccgtcaaattgagtttggttcggatgcgtacccgcgagtatgagttttgttgtcatgccta 36919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 29133565 - 29133634
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||||||||  ||||||| |||| ||| ||||||||||| | ||||||||||||||||||||||||||    
T  29133565 ccaacctccttggccaaacagatggcctcccaatcaatccaggcaattttcctattatcctcacacccac 29133634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 33516237 - 33516125
Alignment:
Q  40 gtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggt 139  Q
    ||||||| |||||||||||  |||||||||  |||||||| ||||||| | ||| ||||||||| |||| |  |||||||||| |||||  ||||| |||    
T  33516237 gtgtgagtgaaatgatttagggtttgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggt 33516138  T
Q  140 gggtacttctatc 152  Q
    |||||||| ||||    
T  33516137 gggtacttatatc 33516125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 12079351 - 12079285
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacaccc 546  Q
    ||||||||||| |||||||| |||||| | |||||||||||||||||||| |||| ||||||||||||    
T  12079351 ccaacctccttgtccaaacagatggaccc-caatcaatccaagaaattttgctatgatcctcacaccc 12079285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 4741418 - 4741269
Alignment:
Q  2 gagaagtgagtgtcgcctgacaaactgcggctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgatt 101  Q
    ||||||||||||||  |||| ||| || | || || ||||||||| | || ||||||  ||||||||| ||||||||| |||| |||| ||||||||| |    
T  4741418 gagaagtgagtgtcatctgagaaattgagactatgattgtgtgagaggaacgatttagggtttgagtttctatttatataaaatggataataaattga-t 4741320  T
Q  102 ttatacaatccagacgggtttaggtatgagttcgaggtgggtacttctatc 152  Q
    ||||||| ||   ||||||||  ||||| ||||| ||||||||||| ||||    
T  4741319 ttatacattcggaacgggtttttgtatgggttcggggtgggtacttatatc 4741269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 42299882 - 42299972
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||||||  ||||||||||||||| || |||| ||| |||||||||||||||||| || |   ||||| |||||||||||||||||    
T  42299882 atacctaaactcagtcaaaccggaaaaaacccgtcaaattgagtttggttcggatgggtaaccgcatatatgaattttgttgtcatgccta 42299972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 11028181 - 11028258
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||| |||| |||| || |||| ||||||||||||||| |||||| ||||| ||||| ||||||||| |||||||||    
T  11028181 tcaaaacggagaaaacccgtcaaattgggtttggttcgggtgggtaaccacgtgtatgggttttgttgccatgcctaa 11028258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 26564925 - 26565018
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaat 285  Q
    |||||||||| |  ||||| || | ||||||| |||| |||| |||||||||| |||||| ||||| ||||| ||||||||| |||||||||||    
T  26564925 atacccaaacccagtcaaaacgaagaaaatccgtcaaattggatttggttcgggtgggtaaccacgggtatgggttttgttgccatgcctaaat 26565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 442
Target Start/End: Original strand, 2820676 - 2820808
Alignment:
Q  310 aatcttatcacaacgaatataagctaaaattaaggaaagtgatatacacacaaaaattaacatttactacaatttttatcattatgggtacataaaaatt 409  Q
    |||||||||||||| || |||||||||| ||| || ||||||||| ||||  |||| ||| | ||||||  ||||||||||||||      || ||||||    
T  2820676 aatcttatcacaaccaacataagctaaatttatgggaagtgatattcacaataaaaataataattactattatttttatcattatcaaataattaaaatt 2820775  T
Q  410 aaataccacgatataaacactactaatatgtgt 442  Q
    ||||||| | || |||||||||||||| |||||    
T  2820776 aaataccgcaatttaaacactactaatgtgtgt 2820808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 12505687 - 12505575
Alignment:
Q  48 gaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggtactt 147  Q
    |||||||||||| |||| |||| ||||||||| |||||||   |||||||||| || |||  ||  ||||||||| |||||||||||  ||||||||||     
T  12505687 gaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtacta 12505588  T
Q  148 ctatctccattac 160  Q
     |||| |||||||    
T  12505587 atatccccattac 12505575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 21714142 - 21714047
Alignment:
Q  38 ttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagtt 133  Q
    |||||| || |||||||||||  ||||||||| ||||||||| ||||| | | ||||||| ||||| |||| |  ||||| |||||||||||||||    
T  21714142 ttgtgtaagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttgagacgagtttaggtatgagtt 21714047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 21423955 - 21424045
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| ||| |||||||| |||| |||| ||||||||||  ||||| ||||| ||||||||||| ||| ||||||||    
T  21423955 atacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggttcgggcgggtaaccacgggtatgagttttattgccatgccta 21424045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 8843970 - 8843866
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||   ||| |||| |||||||||  |||||| | ||||||| ||||| |||| ||  ||||||||| |||||||||||| ||    
T  8843970 tgtgtgagtgaaatgatttaggatttaagtttctatttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttcg-gg 8843872  T
Q  139 tgggta 144  Q
    ||||||    
T  8843871 tgggta 8843866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 8856934 - 8856830
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||   ||| |||| |||||||||  |||||| | ||||||| ||||| |||| ||  ||||||||| |||||||||||| ||    
T  8856934 tgtgtgagtgaaatgatttaggatttaagtttctatttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttcg-gg 8856836  T
Q  139 tgggta 144  Q
    ||||||    
T  8856835 tgggta 8856830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 36919052 - 36919121
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttataca 108  Q
    |||||||| ||||||||||| |||||||||| ||||||||| ||||| | | ||||| ||||||| ||||    
T  36919052 tgtgtgagtgaaatgatttagagtttgagtttctatttatataaaagtggtaataaactgattttctaca 36919121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 55826599 - 55826534
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||| |||| |||| ||||||||||| ||||| ||||| ||||| ||||||||| ||||||||    
T  55826599 aaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatgccta 55826534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 425897 - 425943
Alignment:
Q  233 ggtttggttcggatgggtacccacgagtatgagttttgttgtcatgc 279  Q
    |||| |||||||| || || |||||||||||||||||||||||||||    
T  425897 ggttaggttcggacggataaccacgagtatgagttttgttgtcatgc 425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 12075797 - 12075691
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||| | ||||||||| | ||||| |||| ||||||||| |||| || | ||||||||||||| |||| ||| |||| ||||  ||| ||||| | ||    
T  12075797 tgtgtgggtgaaatgattcagagttttagtttctatttatataaaatgggtaataaattgattttctacattccggacgagtttgagtacgagtttgggg 12075698  T
Q  139 tgggtac 145  Q
    |||||||    
T  12075697 tgggtac 12075691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 15987263 - 15987173
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| | ||||||  ||| |||| || |||| ||||||||||||||| |||||| || ||| | || ||||||||| ||||||||    
T  15987263 atacccaaacccaatcaaaatggagaaaacccgtcaaattgggtttggttcgggtgggtaaccgcgaatgtgggttttgttgccatgccta 15987173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 19883057 - 19882967
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| ||||| | |||||| ||| ||||| || |||| |||||||||||||||  |||||  | |||||||| ||||||||| ||||||||    
T  19883057 atactcaaacccaatcaaagcgggaaaaacccgtcaaattgggtttggttcgggcgggtattcgcgagtatgggttttgttgccatgccta 19882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 37349239 - 37349297
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| |||||||||    
T  37349239 tcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaa 37349297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 37384203 - 37384265
Alignment:
Q  40 gtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattt 102  Q
    ||||||| |||||||||||  ||||||  | ||||||||| ||||||||| ||||||||||||    
T  37384203 gtgtgagtgaaatgatttagggtttgaacttctatttatataaaagggataataaattgattt 37384265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 7334349 - 7334287
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgatttt 103  Q
    |||||||| ||||||||||| |||||||||| ||||||||  ||||  ||| |||||||||||||    
T  7334349 tgtgtgagtgaaatgatttagagtttgagtttctatttat--aaaaacgataataaattgatttt 7334287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 7609097 - 7609150
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
    |||| |||||||| |||||| |||||| ||||||||||| ||||||||| ||||    
T  7609097 tcaaattgggtttagttcgggtgggtaaccacgagtatgggttttgttgccatg 7609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 19548906 - 19548853
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
    |||| ||||||||||||||| | ||||||||   ||||||||||||||||||||    
T  19548906 tcaaattgggtttggttcgggtaggtacccataggtatgagttttgttgtcatg 19548853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 33615290 - 33615241
Alignment:
Q  232 gggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcct 281  Q
    ||||||||||||||||||||||| ||  |||| |||| ||||||||||||    
T  33615290 gggtttggttcggatgggtacccgcggatatgggtttagttgtcatgcct 33615241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 42907820 - 42907936
Alignment:
Q  43 tgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtggg 142  Q
    |||| |||||||||||  ||||||||| ||||||||| ||||| | |  |||||||||||| |||| ||  |||| |||| |||||| | ||| ||||||    
T  42907820 tgagtgaaatgatttagggtttgagtttctatttatataaaagag-tagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtggg 42907918  T
Q  143 tacttctatctccattac 160  Q
    ||| | |||| |||||||    
T  42907919 tacctatatccccattac 42907936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 16575192 - 16575280
Alignment:
Q  190 gaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
    |||||||||||||| |||||| |||| ||||  |||||| |||| ||||||| ||| |  |||| ||||||||  ||||||||| ||||    
T  16575192 gaatacccaaactcaatcaaagcggagaaaactcatcaaattggatttggtttggacgaatacctacgagtataggttttgttgccatg 16575280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 23878025 - 23877956
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||| |||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||    
T  23878025 ccaaccaccttatccaaacaaatggacccccaatcaatccaggtaattttcctattatcctcacacccac 23877956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 38 - 279
Target Start/End: Original strand, 6810080 - 6810321
Alignment:
Q  38 ttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgag 137  Q
    ||||||||| ||||| |||||| ||||| ||| ||||| ||| |||||||   |||||||||||||   || ||  || |||||| |||||| ||||| |    
T  6810080 ttgtgtgagtgaaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggg 6810179  T
Q  138 gtgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggttt 237  Q
    ||| |||||| ||||  | ||||  || ||| || | |||| | | ||| | ||| ||||||||||  ||||| |||||||||||| |||| ||| ||||    
T  6810180 gtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaactcattcaaagcggaaaaaatccgtcaaattgagttt 6810279  T
Q  238 ggttcggatgggtacccacgagtatgagttttgttgtcatgc 279  Q
    |||||||| ||||| |||||  |||| ||||||||| |||||    
T  6810280 ggttcggacgggtatccacggatatgggttttgttgccatgc 6810321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 29664903 - 29665000
Alignment:
Q  48 gaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggtac 145  Q
    ||||||||||| |||||||||| ||||||| | ||||||| |  |||||||||||| |||| ||  ||||||||| ||||||||||||| ||||||||    
T  29664903 gaaatgatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtac 29665000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 35311901 - 35311991
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||||||||  ||||| |||||||||||| |||| |||||||||||||||  ||||| || ||  |||||||||| ||||||||||||    
T  35311901 atacccaaactcagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaaccgcggatatgagttttattgtcatgccta 35311991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 12457439 - 12457536
Alignment:
Q  38 ttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcg 135  Q
    ||||||||| ||||||||||| | |||  ||| |||||||||  |||||| | ||||||||||||| |||| ||  ||||||||| ||||||||||||    
T  12457439 ttgtgtgagtgaaatgatttagactttaggtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgggtatgagttcg 12457536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 13401991 - 13401914
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||| |||||||||||| |||| |||||||||||||||  ||||| || || ||||| ||||||||| |||||||||    
T  13401991 tcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcctaa 13401914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 35194008 - 35193911
Alignment:
Q  186 cagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||||||||  |   |||| |||||||||||| |||| ||||||||| || ||  ||||| ||||||||||||||||||||| ||| |||||    
T  35194008 cagagaatacccaaatccagccaaaacggaaaaaatccgtcaaattgggtttgatttgggcgggtaaccacgagtatgagttttgttgccatacctaa 35193911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 282
Target Start/End: Original strand, 12447482 - 12447546
Alignment:
Q  218 aaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||| |||| ||||||||||||||| |||||| ||||| ||||| ||||||||| ||||||||    
T  12447482 aaatccgtcaaattgggtttggttcgggtgggtaaccacgggtatgggttttgttgccatgccta 12447546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 18451885 - 18451833
Alignment:
Q  231 tgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||    
T  18451885 tgggtttggttcggacgggaacccacgtgtatgggttttgttgtcatgcctaa 18451833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 18452019 - 18451937
Alignment:
Q  71 ctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggtacttctatct 153  Q
    ||||| ||| ||||||||| ||||||||||||| |||||||  |||| ||||   |||||||||| ||||||||||| |||||    
T  18452019 ctattaatataaaagggataataaattgattttctacaatcgggacgagtttgattatgagttcggggtgggtacttatatct 18451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 33727998 - 33727912
Alignment:
Q  196 ccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||| | |||||| |||  ||||||| |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| ||||||||    
T  33727998 ccaaacccaatcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 33727912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 15890308 - 15890385
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||| ||| ||||| || |||| |||| ||||||||||  ||||| || |||||||| |||||||||||||||||||    
T  15890308 tcaaaacgggaaaaacccgtcaaattggatttggttcgggcgggtaaccgcgagtatgggttttgttgtcatgcctaa 15890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 18207139 - 18207196
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| |||||||||||| || |||||| ||||| ||||||||||||||| ||||||||    
T  18207139 tcaaattgggtttggtttgggtgggtaaccacgggtatgagttttgttgccatgccta 18207196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 4920928 - 4921004
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| |||| |||| || |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| ||||||||    
T  4920928 tcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 4921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 27900567 - 27900424
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||  |||||||||||  |||| |||| ||||||||| ||||| |   |||||||||||||||||| ||  | ||| ||| |||||| |||||||     
T  27900567 tgtgtgactgaaatgatttagggtttcagtttctatttatataaaagaggaaataaattgattttatacattcggggcggatttgggtatgggttcgaga 27900468  T
Q  139 tgggtacttctatctccattacatgtcccgcactcatgttttga 182  Q
    ||||||| | ||||  ||||||  |||||  || ||||||||||    
T  27900467 tgggtacctatatccacattacccgtcccatacccatgttttga 27900424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 37537148 - 37537018
Alignment:
Q  312 tcttatcacaacgaatataagctaaaattaaggaaagtgatatacacacaaaaattaacatttactacaatttttatcattatgg-gtacataaaaatta 410  Q
    |||||||||||| |  |||||||||| ||| |||||||||||| | |  | ||| ||| | ||||||  ||||||||||||||   |||  ||||| |||    
T  37537148 tcttatcacaaccaccataagctaaatttatggaaagtgatattctcgaataaaataataattactattatttttatcattatcaagtatttaaaa-tta 37537050  T
Q  411 aataccacgatataaacactactaatatgtgt 442  Q
    |||||||| || ||||||||||||||||||||    
T  37537049 aataccacaatttaaacactactaatatgtgt 37537018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 6369786 - 6369876
Alignment:
Q  195 cccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaat 285  Q
    ||||||||| |||||| ||  ||||| || |||| || |||||||||||   ||||| |||  | ||||||||||||||||||||||||||    
T  6369786 cccaaactcaatcaaaacgagaaaaaaccgtcaaattaggtttggttcgagcgggtaaccataaatatgagttttgttgtcatgcctaaat 6369876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 42717617 - 42717551
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgtt 272  Q
    ||||| ||| ||||| || |||| |||||||||||||||| ||||| ||||  ||||||||||||||    
T  42717617 tcaaaacgggaaaaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagttttgtt 42717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 35584244 - 35584293
Alignment:
Q  233 ggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||||| |||  |||| || |||||||||||||||||||||||||||    
T  35584244 ggtttggtttggaccggtatccgcgagtatgagttttgttgtcatgccta 35584293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 16311448 - 16311353
Alignment:
Q  49 aaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggtac 145  Q
    ||||||||||  ||||| ||| ||||||||| ||||||||| |||||||||||||  ||| || |||| |||||   |||| ||||| |||||||||    
T  16311448 aaatgatttagggtttg-gtttctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggtac 16311353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 38972855 - 38972951
Alignment:
Q  49 aaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggtac 145  Q
    ||||||||||  |||| |||| | ||||||| ||||||| | ||||||||||||||| || |  ||| ||||||  ||||| ||||| |||||||||    
T  38972855 aaatgatttagggtttcagtttcgatttatataaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtac 38972951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 1709793 - 1709724
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||| |||||    
T  1709793 ccaacctccttatccacacaaatggactctcaatcaatccaagatatttttctattttcctcactcccac 1709724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 20797809 - 20797878
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||| ||||||| |||||    
T  20797809 ccaacctccttatccacacaaatggactctcaattaatccaagatatttttctattttcctcactcccac 20797878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 20367252 - 20367316
Alignment:
Q  485 tccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccaca 549  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||| | ||||||||||||    
T  20367252 tccttatccaaacacatggactcccaatcaatccacgaaattttcctattgttctcacacccaca 20367316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 4557305 - 4557214
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| ||| ||||| || |||| |||||||| |||||| |||||| ||||| |||||||||||||||||||||||||    
T  4557305 atacccaaacccagtcaaaacgggaaaaacccgtcaaattgggttttgttcgggtgggtaaccacgggtatgagttttgttgtcatgcctaa 4557214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 542
Target Start/End: Original strand, 25132806 - 25132869
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcac 542  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||||||||||||||||||    
T  25132806 ccaacctccttgtccaaacagatggacccccaatcaatccgagaaattttcctattatcctcac 25132869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 29284424 - 29284515
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| |||| |||| || |||| |||||||||||||||  ||||| ||||| ||||||||||||||| |||||||||    
T  29284424 atacccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctaa 29284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 772959 - 772895
Alignment:
Q  38 ttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgatttt 103  Q
    ||||||||| ||||||||| || ||||||||| ||||||||||||||||| | |||||||||||||    
T  772959 ttgtgtgagtgaaatgattcaaggtttgagtttctatttatacaaaaggg-taataaattgatttt 772895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 39655273 - 39655181
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaa 284  Q
    |||||||||| | |||||| |||  |||| || |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| ||||||||||    
T  39655273 atacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaaa 39655181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 39728759 - 39728849
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||  ||||||| |||| |||| ||||||||||| ||||| ||||| ||||| ||||||||| ||||||||    
T  39728759 atacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatgccta 39728849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 39775035 - 39774905
Alignment:
Q  312 tcttatcacaacgaatataagctaaaattaaggaaagtgatatacacacaaaaattaacatttactacaatttttatcattatgg-gtacataaaaatta 410  Q
    |||||||||||| |  |||||||||| ||| |||||||||||| | |  | ||| ||| | ||||||  ||||||||||||||   |||  ||||| |||    
T  39775035 tcttatcacaaccatcataagctaaatttatggaaagtgatattctcgaataaaataataattactattatttttatcattatcaagtatttaaaa-tta 39774937  T
Q  411 aataccacgatataaacactactaatatgtgt 442  Q
    |||||||| || ||||||||||||||||||||    
T  39774936 aataccacaatttaaacactactaatatgtgt 39774905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 44639395 - 44639454
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaa 284  Q
    |||| |||||||| ||||||| ||||| |||||  |||||||||||||| ||||||||||    
T  44639395 tcaaattgggtttcgttcggacgggtaaccacggatatgagttttgttgccatgcctaaa 44639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 7469778 - 7469688
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||  |||| || |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| ||||||||    
T  7469778 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 7469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 7570333 - 7570295
Alignment:
Q  404 aaaattaaataccacgatataaacactactaatatgtgt 442  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  7570333 aaaattaaataccacaatttaaacactactaatatgtgt 7570295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 19111822 - 19111912
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| | ||||||  || |||||||| |||| |||| |||||||  | || ||| |||||  |||||||||||||||||||||||    
T  19111822 atacccaaacccaatcaaaaagggaaaaatccgtcaaattggatttggtttaggtgagtaaccacggatatgagttttgttgtcatgccta 19111912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 23921490 - 23921544
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctat 533  Q
    |||| |||||||||||||||||| ||||| || ||||||||| |||| |||||||    
T  23921490 ccaaactccttatccaaacaaatagactcccagtcaatccaaaaaatattcctat 23921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 30904976 - 30904874
Alignment:
Q  43 tgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtggg 142  Q
    |||| ||||||||| |  ||||| ||| ||||||||| ||||||| |  |||||||||||  |||| || |||||| ||| |||||| ||||| ||||||    
T  30904976 tgagtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgggttcggggtggg 30904877  T
Q  143 tac 145  Q
    |||    
T  30904876 tac 30904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 548
Target Start/End: Complemental strand, 26375618 - 26375569
Alignment:
Q  499 aatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||||| ||||| |||| | | ||||||||||||||||||||||||||||    
T  26375618 aatggattctcagtcaacctaggaaattttcctattatcctcacacccac 26375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 29858550 - 29858485
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||| | || |||||||||||||||  ||||| ||||| ||||| ||||||||| ||||||||    
T  29858550 aaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 29858485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 548
Target Start/End: Complemental strand, 14607818 - 14607782
Alignment:
Q  512 tcaatccaagaaattttcctattatcctcacacccac 548  Q
    |||| |||||||||||||||||||||||||| |||||    
T  14607818 tcaacccaagaaattttcctattatcctcacccccac 14607782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 192 - 287
Target Start/End: Complemental strand, 44985918 - 44985823
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaataa 287  Q
    |||||||||| | |||||| |||| ||||||| |||| || | ||||||||||||||||| || ||||||||||||||||||  ||||||||||||    
T  44985918 atacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcggatgggtaaccgcgagtatgagttttgttgcaatgcctaaataa 44985823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 282
Target Start/End: Complemental strand, 19440174 - 19439932
Alignment:
Q  41 tgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattga-ttttatacaatccagacgggtttaggtatgagttcgaggt 139  Q
    |||||| ||||||||||| |||||| ||| |||||||||| |||||| || |||||||| |||| |||| ||  ||||||||| |||||| |||||| ||    
T  19440174 tgtgagtgaaatgatttagagtttgggtttctatttataccaaaggggtggtaaattgatttttttacattcgggacgggtttgggtatgggttcgaagt 19440075  T
Q  140 gggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttgg 239  Q
    |||||| | |||| |||||||   ||||  || | |||||| | ||||| ||| || ||||| |  ||||| |||  |||| || |||| ||||||||||    
T  19440074 gggtacatatatccccattacccatcccaaacccgtgttttcaaatcagggaaaactcaaacccagtcaaagcggggaaaacccgtcaaattgggtttgg 19439975  T
Q  240 ttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||   |||||||| || |||||  |||||||  ||||||||    
T  19439974 ttcgagagggtacccgcgggtatggtttttgtttacatgccta 19439932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 24425444 - 24425551
Alignment:
Q  175 tgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgt 274  Q
    |||||||| ||||||||| |  ||||| | |||||| |||| ||||||| |||| |||||||||||||||   |||| ||||| |||||||||||||||     
T  24425444 tgttttgaaatcagagaaaattcaaacccaatcaaaacggagaaaatccgtcaaattgggtttggttcgggctggtaaccacgtgtatgagttttgttgc 24425543  T
Q  275 catgccta 282  Q
    ||||||||    
T  24425544 catgccta 24425551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 17851945 - 17852035
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||| |||||||||||| |||||||||||||||  ||||| |||| |||||| ||||||||| ||||||||    
T  17851945 atacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttcgggcgggtaaccacaagtatgggttttgttgccatgccta 17852035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 282
Target Start/End: Complemental strand, 23533768 - 23533526
Alignment:
Q  41 tgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatga-taaattgattttat-acaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||| ||||||||||| |||||| ||| ||| ||||||||||||| | | |||||||||||| | ||| ||  |||| |||| |||||| |||||| |    
T  23533768 tgtgagtgaaatgatttagagtttgggtttctaattatacaaaaggggttagtaaattgatttttttacattcgggacgagtttgggtatgggttcgaag 23533669  T
Q  139 tgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttg 238  Q
    ||||||| | |||| |||||||   || |  || | | |||| | ||| | ||| |||||||| |  ||||| ||| ||||| || |||| |||||||||    
T  23533668 tgggtacatatatc-ccattacccatcgcatacccgtattttcaaatcggggaaaacccaaacccagtcaaatcgggaaaaacccgtcaaattgggtttg 23533570  T
Q  239 gttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||  |||||||| || |||||  |||||||||||||||||    
T  23533569 gttcgggagggtacccgcgggtatggattttgttgtcatgccta 23533526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 283
Target Start/End: Original strand, 3920602 - 3920707
Alignment:
Q  175 tgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgt 274  Q
    |||||||| ||| | ||| |||||||| |  ||||| ||| ||||| ||||||| ||||||||||||||| ||||||   |||  |||||||||||||||    
T  3920602 tgttttgaaatcggggaaaacccaaacccagtcaaaacgggaaaaacccatcaaattgggtttggttcgggtgggta---acggatatgagttttgttgt 3920698  T
Q  275 catgcctaa 283  Q
    |||||||||    
T  3920699 catgcctaa 3920707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 7780101 - 7780190
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcct 281  Q
    |||||||||| |  ||||| |||  ||||||| |||| ||| |||||||||||||||||| ||||| ||||| ||||||||| |||||||    
T  7780101 atacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgggtaaccacgggtatgggttttgttgccatgcct 7780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 548
Target Start/End: Complemental strand, 34792093 - 34792048
Alignment:
Q  503 gactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  34792093 gactcccaatcaatccaagtaattttcctattatcctcacacccac 34792048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 543
Target Start/End: Original strand, 9095741 - 9095805
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcaca 543  Q
    |||||||| |||||||||||||| |  |  |||| ||||||||||||||||||||||||||||||    
T  9095741 ccaacctcattatccaaacaaatagtattccaatgaatccaagaaattttcctattatcctcaca 9095805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 23475427 - 23475307
Alignment:
Q  41 tgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattga-ttttatacaatccagacgggtttaggtatgagttcgaggt 139  Q
    |||||| ||||||||||| |||||| |||  ||||||||||||| || |  |||||||| |||| |||| ||  ||||||||| |||||| |||||| ||    
T  23475427 tgtgagtgaaatgatttagagtttgggtttttatttatacaaaacgggtagtaaattgatttttttacattcgggacgggtttgggtatgggttcgaagt 23475328  T
Q  140 gggtacttctatctccattac 160  Q
    |||||| | |||| |||||||    
T  23475327 gggtacatatatccccattac 23475307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 26004472 - 26004396
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||| ||||| ||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||| ||||||||    
T  26004472 tcaaaacgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatgccta 26004396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 21702752 - 21702843
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| ||| |||||||| |||| |||||||||||||||  ||||| |||||  |||| ||||||||| |||||||||    
T  21702752 atacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggttcgggcgggtaaccacggatatgggttttgttgccatgcctaa 21702843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6557929 - 6557827
Alignment:
Q  1 agagaagtgagtgtcgcctgacaaactgcggctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgat 100  Q
    |||||||||||||||  |||| | |||| | ||||| ||||||||| ||||||||||| |||||||| | |||||| ||  ||| |||| ||||| ||||    
T  6557929 agagaagtgagtgtcatctgaaagactgagactttgattgtgtgagtgaaatgatttagagtttgagattctatttctatgaaaaggataataaactgat 6557830  T
Q  101 ttt 103  Q
    |||    
T  6557829 ttt 6557827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 27850332 - 27850242
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| | |||||| |||  |||| || |||| |||||||||||||||  ||||| |||||  |||||||||||||| ||||||||    
T  27850332 atacccaaacccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgccatgccta 27850242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 37218098 - 37218188
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||  |||| ||||||| ||| ||||||||||| |||||| || |  ||||||||||||||||||||||||    
T  37218098 atacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggtgggtatccgctggtatgagttttgttgtcatgccta 37218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 24753270 - 24753347
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||| |||| ||||||| |||| |||  ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||    
T  24753270 tcaaaacggagaaaatccgtcaaattgaatttggttcggacgggtaaccacgggtatgggttttgttgccatgcctaa 24753347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 30650757 - 30650814
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| |||||||||||||||  ||||| ||||| ||||||||||||||| ||||||||    
T  30650757 tcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgacatgccta 30650814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 44734326 - 44734269
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| |||||||||||||||  ||||| || |||||||||||||||||| ||||||||    
T  44734326 tcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgccatgccta 44734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 442
Target Start/End: Original strand, 15973600 - 15973739
Alignment:
Q  304 attttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatatacacacaaaaattaacatttactacaatttttatcattat-gggtacat 402  Q
    ||||||| |||||||||||| || |||| ||||||||| || |||| |||| |||| || ||  || ||||||||  ||||||||||||||  ||||  |    
T  15973600 attttcagtcttatcacaaccaacataaactaaaattatgggaagttatatgcaca-aataaagaaaatttactattatttttatcattatccggtattt 15973698  T
Q  403 aaaaatt-aaataccacgatataaacactactaatatgtgt 442  Q
    ||||||| ||||||||  ||||||| ||||||||| |||||    
T  15973699 aaaaattaaaataccataatataaatactactaatgtgtgt 15973739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 5431989 - 5431916
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaat--aatagaaaact 296  Q
    |||||||| |||||||||||| |||| ||| || ||||||| ||||||| |||| ||||||  |||||||||||    
T  5431989 tcaatttgagtttggttcggacgggtgcccgcgggtatgagctttgttgccatgtctaaatagaatagaaaact 5431916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 16866295 - 16866353
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||| |||||||||||||||  ||||| |||||  |||||||||||||| |||||||||    
T  16866295 tcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgccatgcctaa 16866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 3226921 - 3226853
Alignment:
Q  217 aaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaat 285  Q
    ||||||| |||| |||||||||||||||| ||||| || |  |||||  |||||||| |||||||||||    
T  3226921 aaaatccgtcaaattgggtttggttcggacgggtaaccgcatgtatggattttgttgccatgcctaaat 3226853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 4580445 - 4580481
Alignment:
Q  406 aattaaataccacgatataaacactactaatatgtgt 442  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  4580445 aattaaataccactatataaacactactaatgtgtgt 4580481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 35074601 - 35074653
Alignment:
Q  230 ttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||||||||  ||||| ||||| ||||| ||||||||| ||||||||    
T  35074601 ttgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 35074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 38082224 - 38082188
Alignment:
Q  247 gggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  38082224 gggtacccacgggtatgcgttttgttgtcatgcctaa 38082188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 36131916 - 36131839
Alignment:
Q  205 atcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||| ||||||||||||||||| || |||||||||||| |||||| |||||  ||||| |||||||||||||||||    
T  36131916 atcaaaacggaaaaaatccatcaaattaggtttggttcgggtgggtaaccacggatatgaattttgttgtcatgccta 36131839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 17108292 - 17108412
Alignment:
Q  32 ctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgag 131  Q
    ||||| ||||||||| ||||| |||||  |||| |||| ||||||||| |||| |||| ||||||||||||| |||||||  || | |||| ||||| ||    
T  17108292 ctttgattgtgtgagtgaaattatttagggtttaagtttctatttatataaaatggataataaattgattttttacaatcgggatgagtttgggtataag 17108391  T
Q  132 ttcgaggtgggtacttctatc 152  Q
    ||||||||| |||||| ||||    
T  17108392 ttcgaggtgtgtacttatatc 17108412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 278
Target Start/End: Complemental strand, 33631979 - 33631825
Alignment:
Q  124 ggtatgagttcgaggtgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatcc 223  Q
    |||||| ||| | ||||||||||| |||| |||||||  |||||  || ||||||||||||||||  || | ||||| ||  ||||| ||| ||||| ||    
T  33631979 ggtatgggtttggggtgggtacttatatccccattactcgtcccatacccatgttttgagatcaggtaaaatccaaattcagtcaaagcgggaaaaaccc 33631880  T
Q  224 atcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
     ||||||| | |||||||||| || ||||||||| ||||| | ||||||| ||||    
T  33631879 gtcaatttagatttggttcgggtgcgtacccacgggtatgggctttgttgccatg 33631825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 2075834 - 2075742
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaa 284  Q
    |||||||||| |  ||||| |||| ||||||| |||| ||||||||||||| |  ||||| |||||  |||||||||||||| ||||||||||    
T  2075834 atacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaaccacggatatgagttttgttgccatgcctaaa 2075742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 282
Target Start/End: Original strand, 17469253 - 17469421
Alignment:
Q  114 gacgggtttaggtatgagttcgaggtgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccg 213  Q
    ||||||||| |||||| ||| | ||||||||| | |||  || ||||  |||||  || | |||||||| ||| | ||| |||||||| |  ||||| ||    
T  17469253 gacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaaacg 17469352  T
Q  214 gaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |  ||||||| |||| ||||||||||||||| |||||| | ||| ||||| ||||||||| ||||||||    
T  17469353 gggaaaatccgtcaaattgggtttggttcgggtgggtaactacgggtatgggttttgttgccatgccta 17469421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 27777198 - 27777108
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||| |||| || |||| ||  ||||||||||||| ||||||  || ||||||||||||||||||||||||    
T  27777198 atacccaaacccagtcaaaacggagaaaacccgtcaaattaagtttggttcggataggtacctgcgggtatgagttttgttgtcatgccta 27777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 29416187 - 29416097
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||||||||  ||||| |||  |||| || |||| |||| |||||||||| |||||||||  |||||||| |||||||| ||||||||    
T  29416187 atacccaaactcagtcaaaacggggaaaacccgtcaaattggatttggttcgggtgggtacccgggagtatgaattttgttgccatgccta 29416097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 29918530 - 29918636
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||  ||||||||| ||||||||| ||||| | | ||||||||||||| |||| |   |||||||||  |||||  |||| ||    
T  29918530 tgtgtgagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcgggg 29918629  T
Q  139 tgggtac 145  Q
    |||||||    
T  29918630 tgggtac 29918636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 34777148 - 34777238
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| ||| ||||| || | || |||||||||||||||| |||||  |||| ||||||||||||||| ||||||||    
T  34777148 atacccaaacccagtcaaaacgggaaaaacccgttaaattgggtttggttcggacgggtaatcacgggtatgagttttgttgccatgccta 34777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 1063641 - 1063694
Alignment:
Q  232 gggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaat 285  Q
    |||||||||||||  ||||| ||||| ||||||||||||||| |||||||||||    
T  1063641 gggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctaaat 1063694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 5793472 - 5793577
Alignment:
Q  3 agaagtgagtgtcgcctgacaaactgcggctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattt 102  Q
    |||||||||||||| | || | |||  | ||||| ||||||||| |||||||||||  ||||||||| ||||||||| ||||  ||| || |||||||||    
T  5793472 agaagtgagtgtcgtcagaaagacttagactttggttgtgtgagtgaaatgatttagggtttgagtttctatttatataaaaatgataattaattgattt 5793571  T
Q  103 tataca 108  Q
    | ||||    
T  5793572 tttaca 5793577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 9476178 - 9476049
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| ||||| ||||| ||||| | || ||||||||| | ||||| | |||| || ||||| |||| ||  || |||||| |||||| ||||||||    
T  9476178 tgtgtgagtgaaataatttagagtttcaatttctatttatatataaggggtaataatttaattttctacattcgggatgggtttgggtatgggttcgagg 9476079  T
Q  139 tgggtacttctatctccattacatgtcccg 168  Q
    |||||| || |||| || |||| |||||||    
T  9476078 tgggtatttatatccccgttacttgtcccg 9476049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 30903969 - 30904090
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||| ||||  ||| ||||||||| |||| |  | ||||||||||||| |||| ||  ||| | ||| |||||| ||  | ||    
T  30903969 tgtgtgagtgaaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatgggg 30904068  T
Q  139 tgggtacttctatctccattac 160  Q
    ||||||||| ||||||||||||    
T  30904069 tgggtacttatatctccattac 30904090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 36274966 - 36275078
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||  ||| | ||| ||||||||| |||||||||  |||||||||||| |||| ||  |||  ||||||||||| ||||| ||    
T  36274966 tgtgtgagtgaaatgatttagggttgg-gtttctatttatataaaagggatagtaaattgattttttacattcgggacatgtttaggtatgggttcgggg 36275064  T
Q  139 tgggtacttctatc 152  Q
    || |||||| ||||    
T  36275065 tgagtacttatatc 36275078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 27932501 - 27932593
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggta-cccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| |||  |||| || |||| |||||||||||||||  ||||| ||| || |||||||||||||||||||||||||    
T  27932501 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaacccgcgggtatgagttttgttgtcatgcctaa 27932593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 39379744 - 39379598
Alignment:
Q  38 ttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgag 137  Q
    |||||| || ||||||||||||  ||||  || ||||||||||| |||| || ||||||||||||  |||| ||  |||| ||||  ||||||||||| |    
T  39379744 ttgtgtaagtgaaatgatttaagatttggatttctatttatacagaagg-ataataaattgatttactacattcgggacgagtttgagtatgagttcg-g 39379647  T
Q  138 gtgggtacttctatctccattacatgtcccgcactcatgttttgagatc 186  Q
    |||||||||| ||||  ||||||  |||||| || | ||||||||||||    
T  39379646 gtgggtacttttatcctcattacccgtcccgtacccgtgttttgagatc 39379598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 43113588 - 43113536
Alignment:
Q  230 ttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||||||||||| |||||| ||||| ||||||||||| ||| ||||||||    
T  43113588 ttgggtttggttcgggtgggtaaccacgggtatgagttttattgccatgccta 43113536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 17084070 - 17084027
Alignment:
Q  235 tttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||    
T  17084070 tttggttcgggtgggtacccacaagtatgggttttgttgtcatg 17084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 282
Target Start/End: Original strand, 14186457 - 14186486
Alignment:
Q  253 ccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||||||||||||||||||||||||||    
T  14186457 ccacgagtatgagttttgttgtcatgccta 14186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 5700288 - 5700384
Alignment:
Q  48 gaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggta 144  Q
    ||||||||||| |||||  ||| | ||||||| ||||||| | | ||||| |||||||||| ||  || || ||| |||||| ||||||||||||||    
T  5700288 gaaatgatttagagtttcggtttcaatttatataaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggttcgaggtgggta 5700384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 11255001 - 11254925
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||||||||| || |||| |||| |||||||||||  |||| || |  ||||| ||||||||||||||||||    
T  11255001 tcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 11254925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 546
Target Start/End: Original strand, 18187880 - 18187912
Alignment:
Q  514 aatccaagaaattttcctattatcctcacaccc 546  Q
    ||||||||||||||||||||| |||||||||||    
T  18187880 aatccaagaaattttcctattgtcctcacaccc 18187912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 37960948 - 37960872
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||| ||||| ||||||| || |||| ||||||| |||||| | |||  ||||||||||| |||||||||||    
T  37960948 tcaaaacgggaaaaacccatcaaattaggttcggttcgggtgggtaactacggatatgagttttgatgtcatgccta 37960872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 14184 - 14098
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatg 278  Q
    |||||||||| | | |||| ||| ||||| || |||| |||||||||||| || |||||| ||||||||||||||||||||||||||    
T  14184 atacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggtttgggtgggtaaccacgagtatgagttttgttgtcatg 14098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 37106781 - 37106871
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||||||||  ||||| |||  |||| || |||| |||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  37106781 atacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgtcatgccta 37106871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 12807591 - 12807522
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    ||||||||||||||||||||||||||  | ||||||||||||| || |||  ||||||||||||||||||    
T  12807591 ccaacctccttatccaaacaaatggatccccaatcaatccaagtaacttttatattatcctcacacccac 12807522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 256
Target Start/End: Complemental strand, 17845556 - 17845339
Alignment:
Q  40 gtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattga-ttttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    ||||||| |||||||||||   || ||||| ||||||||| |||| |||| ||||||||| |||| |||| || |||||||||| |||||| |||   ||    
T  17845556 gtgtgagtgaaatgatttaggtttggagtttctatttatataaaaaggataataaattgatttttttacattcgagacgggtttgggtatgggttaaggg 17845457  T
Q  139 tgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttg 238  Q
    ||||||||| ||| ||||||||  ||| |  |||| |||||||| |||  |||| || ||||| | |||||| | |  ||||||| |||||||  |||||    
T  17845456 tgggtacttatatgtccattaccggtctcatactcgtgttttgaaatcgaagaaaactcaaacccaatcaaagcagggaaaatccgtcaatttaagtttg 17845357  T
Q  239 gttcggatgggtacccac 256  Q
    || | || ||||||||||    
T  17845356 gtacagacgggtacccac 17845339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 13531867 - 13531942
Alignment:
Q  33 tttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttataca 108  Q
    |||| ||||||||| |||||||||||  ||||||||| ||||||||| |||| |||| ||||||||||||| ||||    
T  13531867 tttgattgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctaca 13531942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 6027920 - 6027811
Alignment:
Q  173 catgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgtt 272  Q
    |||||||| | ||| | ||| |||||||| | |||||| |||  |||| || |||| |||||||||||||||  || || ||||||||||| ||||||||    
T  6027920 catgttttaaaatcggggaaaacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgtt 6027821  T
Q  273 gtcatgccta 282  Q
    ||||||||||    
T  6027820 gtcatgccta 6027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 12341689 - 12341780
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    ||||||||||||  ||||| |||  |||| || |||| |||||||||||||||| || || || || ||||||||||||||| |||||||||    
T  12341689 atacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggataaccgcgggtatgagttttgttgccatgcctaa 12341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 13705355 - 13705265
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| || ||||| |||  |||| || |||| |||||| ||||||||| ||||| ||| | ||||||||||||||| ||||||||    
T  13705355 atacccaaaccctgtcaaaacggggaaaacccgtcaaattgggtatggttcggacgggtaaccatgggtatgagttttgttgccatgccta 13705265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 25210301 - 25210407
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||  ||||||||| ||||||||| |||| || | | ||||||||||| |||| ||  || |||||| |||||| ||| | ||    
T  25210301 tgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttgggg 25210400  T
Q  139 tgggtac 145  Q
    |||||||    
T  25210401 tgggtac 25210407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 544
Target Start/End: Complemental strand, 10289506 - 10289441
Alignment:
Q  479 ccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacac 544  Q
    ||||||||| | |||||||| |  ||||| ||||| ||||||||||| ||||||||||||||||||    
T  10289506 ccaacctccctgtccaaacagaaagactcccaatcgatccaagaaatcttcctattatcctcacac 10289441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 30696848 - 30696963
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| || ||||||||  |||||| || ||||||||| |||| || | ||||||||||||| |||| |   ||  ||||| |||||||||||| ||    
T  30696848 tgtgtgagtgacatgatttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcgggg 30696947  T
Q  139 tgggtacttctatctc 154  Q
    ||||||| | ||||||    
T  30696948 tgggtacatatatctc 30696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 30847035 - 30847126
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| |||  |||| || |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| |||||||||    
T  30847035 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaa 30847126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 36128106 - 36128015
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| |  ||||| |||  ||||||| |||| || ||||||||||||| | ||| ||||| ||||| ||||||||| |||||||||    
T  36128106 atacccaaacccagtcaaaacggggaaaatccgtcaaattaggtttggttcggacgagtaaccacgggtatgggttttgttgccatgcctaa 36128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 44630685 - 44630618
Alignment:
Q  287 atagaaaactcaattagattttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatat 354  Q
    |||||||| ||| || ||||||||||||||||||||| || |||| ||||||||| |  |||||||||    
T  44630685 atagaaaattcagttggattttcaatcttatcacaacaaacataacctaaaattatgagaagtgatat 44630618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 17968081 - 17968043
Alignment:
Q  404 aaaattaaataccacgatataaacactactaatatgtgt 442  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  17968081 aaaattaaataccacaatttaaacactactaatatgtgt 17968043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 29656867 - 29656797
Alignment:
Q  72 tatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtggg 142  Q
    |||||||| ||||||||| |||||||||||||||||| |  |||| | |||  ||||||||||| ||||||    
T  29656867 tatttatataaaagggataataaattgattttatacatttgagacagatttgtgtatgagttcggggtggg 29656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 13830857 - 13830914
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| |||||||||||||||  ||||| ||||| ||||| ||||||||||||| ||||    
T  13830857 tcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcataccta 13830914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 9632489 - 9632565
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||| ||||| || |||| ||| |||||||||||  ||||| ||||| ||||| ||||||||| ||||||||    
T  9632489 tcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 9632565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 31942171 - 31942095
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||| ||||| ||||||| ||| |||||||| ||  ||||| ||||| ||||| ||||||||||||| ||||    
T  31942171 tcaaagcgggaaaaacccatcaaattgagtttggtttgggcgggtaaccacgggtatgggttttgttgtcataccta 31942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 38592106 - 38592166
Alignment:
Q  294 actcaattagattttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatat 354  Q
    ||||||||||||  |||||||||||||||  || ||||| |||||||| |||||| |||||    
T  38592106 actcaattagatactcaatcttatcacaatcaacataagttaaaattatggaaagcgatat 38592166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 548
Target Start/End: Complemental strand, 17110580 - 17110515
Alignment:
Q  483 cctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcacacccac 548  Q
    ||||||| |||||||| |||||||||  || ||||||||||||||||||||||||||||| |||||    
T  17110580 cctccttgtccaaacagatggactcttgataaatccaagaaattttcctattatcctcacccccac 17110515  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 541
Target Start/End: Original strand, 14362940 - 14363000
Alignment:
Q  481 aacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctca 541  Q
    ||||||||||||||||||| || |||| |||| || |||||||||||||||||||||||||    
T  14362940 aacctccttatccaaacaagtgaactcccaatgaaaccaagaaattttcctattatcctca 14363000  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 282
Target Start/End: Original strand, 9402512 - 9402754
Alignment:
Q  39 tgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgagg 138  Q
    |||||||| |||||||||||  ||||| ||| ||||||||| ||| ||| |  |||||||||||| |||| || |||| |||||  ||||| ||||| ||    
T  9402512 tgtgtgagtgaaatgatttagggtttgggtttctatttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggttcg-gg 9402610  T
Q  139 tgggtacttctatctccattacatgtcccgcactcatgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttg 238  Q
    |||  || | ||||    ||||  |||| | || |||||||||| ||| | ||| |||||||  |  ||||| |||  |||||||||||| |||||||||    
T  9402611 tggacacctatatccatgttacccgtcctgtacccatgttttgaaatcggggaaaacccaaatccagtcaaagcggggaaaatccatcaaattgggtttg 9402710  T
Q  239 gttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||||  ||||||||  | |||||||| ||||| |||||||||    
T  9402711 gttcgggcgggtacccgtgggtatgagtattgttatcatgccta 9402754  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 2367428 - 2367506
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaa 284  Q
    ||||| ||| ||||| ||||||| |||||||||||||||| ||||| |||||  |||| ||||||||| ||||||||||    
T  2367428 tcaaaacgggaaaaacccatcaaattgggtttggttcggacgggtaaccacggatatgggttttgttgccatgcctaaa 2367506  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 542
Target Start/End: Original strand, 20497576 - 20497641
Alignment:
Q  477 cgccaacctccttatccaaacaaatggactctcaatcaatccaagaaattttcctattatcctcac 542  Q
    ||||||||||||| |||||| | |||||| |||||||||||||| |||||||||||| ||| ||||    
T  20497576 cgccaacctccttgtccaaatagatggaccctcaatcaatccaacaaattttcctatgatcttcac 20497641  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 34345967 - 34345926
Alignment:
Q  236 ttggttcggatgggtacccacgagtatgagttttgttgtcat 277  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  34345967 ttggttcggacgggtacccacgagtatgagttttgttgtcat 34345926  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 24225835 - 24225886
Alignment:
Q  235 tttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaata 286  Q
    ||||||||||| ||||| ||| | ||||||||||||||||||||||||||||    
T  24225835 tttggttcggacgggtaaccatgggtatgagttttgttgtcatgcctaaata 24225886  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 30986341 - 30986434
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaaat 285  Q
    ||||||||||||  ||||| |||  |||| || |||| ||| |||||||||||  ||||| ||||| ||||| ||||||||| |||||||||||    
T  30986341 atacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaaat 30986434  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 10925615 - 10925487
Alignment:
Q  32 ctttgtttgtgtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgag 131  Q
    ||||| |||||| || |||||||||||  |||| || | ||||||||| |||||| || |||||||  |||| |||| ||   | | ||||||||||| |    
T  10925615 ctttgattgtgttagtgaaatgatttagggtttcagattctatttatataaaaggaataataaattatttttttacattcggaatgagtttaggtatggg 10925516  T
Q  132 ttcgaggtgggtacttctatctccattac 160  Q
    |||| ||||| ||||| ||||||||||||    
T  10925515 ttcggggtggatacttatatctccattac 10925487  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 27534772 - 27534863
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcctaa 283  Q
    |||||||||| | |||||| |||  |||| || |||| ||| |||||||||||| || || ||||| ||||| ||||||||| |||||||||    
T  27534772 atacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcggacggttaaccacgggtatgggttttgttgccatgcctaa 27534863  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 32959919 - 32960026
Alignment:
Q  175 tgttttgagatcagagaatacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgt 274  Q
    |||||||| || || ||| |||||||| | |||||| ||   ||||||| |||| || |||||| ||||| ||||||||| |  ||||||||| ||||||    
T  32959919 tgttttgaaattagggaaaacccaaacccaatcaaaacgaggaaaatccgtcaaattaggtttgattcgggtgggtacccgcatgtatgagttatgttgt 32960018  T
Q  275 catgccta 282  Q
    ||||||||    
T  32960019 catgccta 32960026  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 3483923 - 3483833
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||||||||| |  ||||| |||  |||| || |||| |||||||||||||||  ||||| ||| ||||||| ||||||||| ||||||||    
T  3483923 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccatgagtatgggttttgttgccatgccta 3483833  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 10188080 - 10187991
Alignment:
Q  192 atacccaaactctatcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgcct 281  Q
    |||||||||| |  ||||| |||  |||| || |||| |||||||||||||||  ||||| ||||| ||||| ||||||||| |||||||    
T  10188080 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 10187991  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 14506195 - 14506252
Alignment:
Q  225 tcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    |||| ||| |||| |||||||||| || ||||| ||||||||||| ||||||||||||    
T  14506195 tcaaattgagtttcgttcggatggttaaccacgggtatgagttttattgtcatgccta 14506252  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 14790 - 14902
Alignment:
Q  48 gaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggtttaggtatgagttcgaggtgggtactt 147  Q
    |||||||||||| |||| |||| ||||||||| |||||||   |||||||||| || |||  ||  ||||||||| |||||||||||  ||||||||||     
T  14790 gaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtacta 14889  T
Q  148 ctatctccattac 160  Q
     |||| |||||||    
T  14890 atatccccattac 14902  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 26300 - 26367
Alignment:
Q  287 atagaaaactcaattagattttcaatcttatcacaacgaatataagctaaaattaaggaaagtgatat 354  Q
    |||||||| ||| || |||| |||||||||||||||| || |||| ||||||||| ||||||||||||    
T  26300 atagaaaattcagttggattctcaatcttatcacaacaaacataacctaaaattatggaaagtgatat 26367  T

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Target: scaffold1322 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 1037 - 1117
Alignment:
Q  42 gtgagggaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttatacaatccagacgggttt 122  Q
    ||||| ||||||||||||  |||||||| ||||||||| |||| || | ||||||| ||||| |||| ||  |||||||||    
T  1037 gtgagtgaaatgatttaagatttgagtttctatttatataaaatgggtaataaattaattttctacattcatgacgggttt 1117  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 10392 - 10468
Alignment:
Q  206 tcaaaccggaaaaaatccatcaatttgggtttggttcggatgggtacccacgagtatgagttttgttgtcatgccta 282  Q
    ||||| ||||||||| || |||| |||| |||||||||||  |||| || |  ||||| ||||||||||||||||||    
T  10392 tcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttgtcatgccta 10468  T

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