View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11627_high_1_N (Length: 472)

Name: NF11627_high_1_N
Description: NF11627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11627_high_1_N
NF11627_high_1_N
[»] chr7 (49 HSPs)
chr7 (21-168)||(56330-56477)
chr7 (21-168)||(20478042-20478189)
chr7 (21-168)||(27666042-27666189)
chr7 (24-174)||(29996494-29996644)
chr7 (24-168)||(39859209-39859353)
chr7 (49-168)||(35401969-35402088)
chr7 (49-168)||(35403589-35403708)
chr7 (79-168)||(20479719-20479808)
chr7 (21-168)||(37115503-37115650)
chr7 (79-169)||(78014-78104)
chr7 (24-169)||(6602334-6602479)
chr7 (49-165)||(27664433-27664549)
chr7 (21-175)||(24228386-24228540)
chr7 (49-168)||(13169653-13169772)
chr7 (21-168)||(38474120-38474267)
chr7 (32-165)||(34776903-34777036)
chr7 (21-169)||(30940402-30940550)
chr7 (49-168)||(47384294-47384413)
chr7 (48-165)||(37796185-37796302)
chr7 (24-169)||(45359335-45359480)
chr7 (49-165)||(39857648-39857764)
chr7 (108-167)||(29994907-29994966)
chr7 (21-168)||(47386186-47386333)
chr7 (49-173)||(37113936-37114060)
chr7 (49-167)||(24226582-24226700)
chr7 (24-146)||(13168142-13168267)
chr7 (79-169)||(23904582-23904672)
chr7 (97-169)||(38549546-38549618)
chr7 (79-165)||(6605397-6605483)
chr7 (49-168)||(22155817-22155936)
chr7 (49-168)||(22211732-22211851)
chr7 (107-169)||(23906295-23906357)
chr7 (79-165)||(48227941-48228027)
chr7 (99-168)||(46437107-46437176)
chr7 (48-158)||(33038801-33038911)
chr7 (99-164)||(35691431-35691496)
chr7 (21-122)||(35693347-35693450)
chr7 (48-119)||(366747-366818)
chr7 (61-112)||(7401949-7402000)
chr7 (32-131)||(45463707-45463806)
chr7 (48-158)||(46996706-46996816)
chr7 (78-159)||(13039641-13039722)
chr7 (79-168)||(34774998-34775087)
chr7 (107-168)||(45361304-45361365)
chr7 (70-158)||(47341712-47341800)
chr7 (137-168)||(35693434-35693465)
chr7 (48-158)||(27955380-27955490)
chr7 (68-158)||(38613505-38613595)
chr7 (116-165)||(13018036-13018085)
[»] chr8 (57 HSPs)
chr8 (21-172)||(27691150-27691301)
chr8 (21-171)||(27406894-27407044)
chr8 (21-175)||(33708801-33708954)
chr8 (21-168)||(13282478-13282625)
chr8 (79-168)||(601704-601793)
chr8 (21-150)||(15305815-15305944)
chr8 (21-150)||(15486184-15486313)
chr8 (24-168)||(8609787-8609931)
chr8 (24-168)||(13108336-13108480)
chr8 (79-173)||(33762713-33762807)
chr8 (79-168)||(29237151-29237240)
chr8 (79-168)||(29239187-29239276)
chr8 (24-168)||(38547228-38547372)
chr8 (79-168)||(27692837-27692926)
chr8 (79-168)||(38548831-38548920)
chr8 (49-176)||(8608229-8608357)
chr8 (79-167)||(33707207-33707295)
chr8 (21-165)||(42941777-42941921)
chr8 (49-168)||(33761069-33761188)
chr8 (79-168)||(13106804-13106893)
chr8 (79-168)||(15308261-15308350)
chr8 (79-168)||(15488630-15488719)
chr8 (79-168)||(35509214-35509303)
chr8 (49-168)||(35510789-35510908)
chr8 (49-165)||(13283965-13284081)
chr8 (21-165)||(41825641-41825785)
chr8 (21-168)||(41042581-41042728)
chr8 (49-168)||(42943396-42943515)
chr8 (21-170)||(22272332-22272483)
chr8 (21-165)||(26242311-26242455)
chr8 (21-168)||(13486096-13486243)
chr8 (79-165)||(27404213-27404299)
chr8 (169-230)||(18645752-18645813)
chr8 (21-168)||(7745109-7745256)
chr8 (49-168)||(26238726-26238845)
chr8 (87-169)||(34681074-34681156)
chr8 (69-167)||(5036446-5036544)
chr8 (49-168)||(22273861-22273980)
chr8 (49-168)||(41823890-41824009)
chr8 (21-155)||(9673162-9673296)
chr8 (109-169)||(600759-600819)
chr8 (100-168)||(13484545-13484613)
chr8 (49-168)||(5038032-5038150)
chr8 (87-168)||(43262145-43262226)
chr8 (79-158)||(28433751-28433830)
chr8 (48-158)||(31821428-31821538)
chr8 (107-168)||(41040720-41040781)
chr8 (21-104)||(40339677-40339760)
chr8 (48-122)||(11788367-11788441)
chr8 (32-122)||(40020623-40020713)
chr8 (48-158)||(42897778-42897888)
chr8 (79-132)||(33750419-33750472)
chr8 (48-105)||(37526027-37526084)
chr8 (62-158)||(462388-462484)
chr8 (69-105)||(9184446-9184482)
chr8 (62-158)||(32822371-32822467)
chr8 (62-158)||(33160166-33160262)
[»] chr5 (36 HSPs)
chr5 (21-168)||(29621758-29621905)
chr5 (21-172)||(42473584-42473735)
chr5 (21-165)||(40780553-40780697)
chr5 (21-168)||(2854304-2854450)
chr5 (21-168)||(24541188-24541336)
chr5 (24-168)||(17574318-17574462)
chr5 (21-169)||(36057590-36057738)
chr5 (24-170)||(7267841-7267987)
chr5 (79-168)||(40782211-40782300)
chr5 (79-174)||(7269446-7269541)
chr5 (79-168)||(29620138-29620227)
chr5 (49-168)||(2852886-2853005)
chr5 (49-168)||(21842962-21843081)
chr5 (21-168)||(34327635-34327782)
chr5 (24-168)||(2179787-2179931)
chr5 (49-168)||(12738706-12738825)
chr5 (49-168)||(12801529-12801648)
chr5 (49-171)||(8541241-8541363)
chr5 (49-166)||(17577905-17578022)
chr5 (79-168)||(30463900-30463989)
chr5 (24-169)||(30468260-30468405)
chr5 (79-168)||(42471548-42471637)
chr5 (32-168)||(8539675-8539811)
chr5 (21-165)||(18624985-18625129)
chr5 (79-168)||(28813765-28813856)
chr5 (100-165)||(28822111-28822176)
chr5 (107-168)||(34328855-34328916)
chr5 (77-158)||(43492131-43492212)
chr5 (48-158)||(18728606-18728716)
chr5 (62-158)||(38596878-38596974)
chr5 (61-112)||(27075876-27075927)
chr5 (48-122)||(32087560-32087634)
chr5 (79-168)||(32134231-32134320)
chr5 (81-165)||(41493847-41493931)
chr5 (48-158)||(35395343-35395453)
chr5 (128-168)||(28819348-28819388)
[»] chr1 (49 HSPs)
chr1 (21-168)||(9121645-9121792)
chr1 (21-165)||(33602621-33602765)
chr1 (21-168)||(47013059-47013206)
chr1 (21-168)||(46583533-46583680)
chr1 (24-168)||(4855946-4856090)
chr1 (24-168)||(34778118-34778262)
chr1 (79-168)||(34776569-34776658)
chr1 (49-168)||(46582010-46582129)
chr1 (79-168)||(8169568-8169657)
chr1 (79-168)||(26223587-26223676)
chr1 (49-170)||(37345932-37346053)
chr1 (21-168)||(2869579-2869726)
chr1 (81-168)||(8167942-8168029)
chr1 (49-168)||(25276742-25276861)
chr1 (79-168)||(9120039-9120128)
chr1 (79-168)||(27089279-27089368)
chr1 (24-168)||(6818658-6818802)
chr1 (24-168)||(25278348-25278492)
chr1 (24-168)||(31238475-31238619)
chr1 (24-171)||(37344339-37344486)
chr1 (79-168)||(47011456-47011545)
chr1 (21-168)||(27087283-27087430)
chr1 (68-175)||(25278977-25279084)
chr1 (79-169)||(4854409-4854499)
chr1 (79-168)||(1444181-1444270)
chr1 (21-168)||(51896129-51896276)
chr1 (21-168)||(3013447-3013600)
chr1 (25-168)||(50556078-50556221)
chr1 (79-168)||(31236819-31236908)
chr1 (79-157)||(33599229-33599307)
chr1 (98-168)||(52641888-52641958)
chr1 (21-90)||(1442599-1442668)
chr1 (99-168)||(2871096-2871165)
chr1 (77-165)||(52643648-52643736)
chr1 (21-122)||(15104487-15104588)
chr1 (107-168)||(33599187-33599248)
chr1 (99-168)||(37088156-37088225)
chr1 (107-167)||(1442551-1442611)
chr1 (107-167)||(6816866-6816926)
chr1 (107-167)||(50554164-50554224)
chr1 (79-165)||(3011858-3011944)
chr1 (88-168)||(25278854-25278934)
chr1 (79-168)||(23577636-23577725)
chr1 (49-165)||(51894570-51894686)
chr1 (108-168)||(45044949-45045009)
chr1 (48-158)||(42134492-42134602)
chr1 (32-105)||(5783427-5783500)
chr1 (62-118)||(18183961-18184017)
chr1 (62-122)||(36895528-36895588)
[»] chr4 (42 HSPs)
chr4 (21-169)||(43519423-43519571)
chr4 (49-169)||(4173710-4173830)
chr4 (49-168)||(43507167-43507286)
chr4 (49-168)||(43508623-43508742)
chr4 (21-167)||(49523125-49523271)
chr4 (21-165)||(41761723-41761867)
chr4 (79-168)||(319273-319362)
chr4 (79-168)||(5437811-5437900)
chr4 (49-169)||(33265980-33266100)
chr4 (49-168)||(33264382-33264501)
chr4 (49-168)||(51013856-51013975)
chr4 (79-168)||(833223-833312)
chr4 (79-168)||(5439647-5439736)
chr4 (82-168)||(320903-320989)
chr4 (79-168)||(4169686-4169775)
chr4 (24-168)||(51011926-51012070)
chr4 (49-168)||(835012-835131)
chr4 (21-177)||(41781530-41781686)
chr4 (49-168)||(35401749-35401868)
chr4 (79-168)||(49524733-49524822)
chr4 (24-168)||(35404425-35404569)
chr4 (21-169)||(48813786-48813934)
chr4 (79-158)||(39345574-39345653)
chr4 (79-163)||(43521109-43521193)
chr4 (49-168)||(20493827-20493946)
chr4 (87-168)||(48645255-48645336)
chr4 (21-149)||(48646724-48646852)
chr4 (99-174)||(11254113-11254188)
chr4 (52-165)||(11601674-11601786)
chr4 (21-119)||(42980684-42980782)
chr4 (32-131)||(39083676-39083775)
chr4 (78-174)||(2691368-2691463)
chr4 (62-158)||(44558511-44558607)
chr4 (32-131)||(5484577-5484676)
chr4 (32-131)||(39921531-39921630)
chr4 (32-131)||(43779855-43779954)
chr4 (78-167)||(20819986-20820075)
chr4 (71-149)||(52868176-52868254)
chr4 (34-131)||(39189419-39189516)
chr4 (99-168)||(42982472-42982541)
chr4 (49-122)||(44794765-44794838)
chr4 (77-165)||(2693285-2693373)
[»] scaffold0058 (3 HSPs)
scaffold0058 (21-168)||(3294-3441)
scaffold0058 (21-168)||(4466-4613)
scaffold0058 (49-168)||(14313-14432)
[»] chr6 (33 HSPs)
chr6 (21-169)||(32455868-32456016)
chr6 (23-150)||(3456766-3456893)
chr6 (21-168)||(13613559-13613706)
chr6 (49-168)||(32518467-32518586)
chr6 (24-168)||(32439071-32439215)
chr6 (79-168)||(3480657-3480746)
chr6 (79-168)||(32454248-32454337)
chr6 (21-167)||(20523367-20523513)
chr6 (24-168)||(32516877-32517021)
chr6 (21-164)||(10568403-10568546)
chr6 (49-168)||(18645074-18645192)
chr6 (21-165)||(7372935-7373079)
chr6 (24-167)||(11355223-11355366)
chr6 (87-168)||(13610690-13610771)
chr6 (79-168)||(9400035-9400124)
chr6 (49-174)||(11357164-11357289)
chr6 (48-168)||(10569888-10570008)
chr6 (100-168)||(32437140-32437208)
chr6 (21-168)||(6899485-6899632)
chr6 (99-168)||(7371175-7371244)
chr6 (49-180)||(6902868-6902996)
chr6 (21-115)||(9398713-9398807)
chr6 (107-168)||(8605353-8605414)
chr6 (49-177)||(20525304-20525432)
chr6 (21-97)||(7049828-7049904)
chr6 (49-153)||(14338480-14338584)
chr6 (62-131)||(3018450-3018519)
chr6 (107-164)||(7049790-7049847)
chr6 (49-165)||(21068628-21068744)
chr6 (32-131)||(17952030-17952129)
chr6 (130-165)||(21091109-21091144)
chr6 (97-174)||(7051263-7051340)
chr6 (62-122)||(2968185-2968245)
[»] chr3 (63 HSPs)
chr3 (21-174)||(3152215-3152368)
chr3 (21-168)||(44794208-44794354)
chr3 (21-162)||(2660218-2660359)
chr3 (24-168)||(53190759-53190903)
chr3 (43-168)||(41977750-41977875)
chr3 (49-168)||(46308807-46308926)
chr3 (79-169)||(41979352-41979442)
chr3 (79-168)||(38193510-38193599)
chr3 (79-168)||(53094273-53094362)
chr3 (24-168)||(27899081-27899225)
chr3 (49-168)||(54900044-54900163)
chr3 (79-168)||(3150252-3150341)
chr3 (24-168)||(2226152-2226296)
chr3 (21-125)||(19987591-19987695)
chr3 (21-168)||(21348723-21348870)
chr3 (49-168)||(38191895-38192014)
chr3 (49-168)||(53187742-53187861)
chr3 (79-168)||(44795890-44795979)
chr3 (79-168)||(46310436-46310525)
chr3 (32-168)||(54898437-54898573)
chr3 (49-168)||(46611273-46611392)
chr3 (21-168)||(51684610-51684757)
chr3 (79-168)||(46609149-46609238)
chr3 (21-169)||(30599915-30600063)
chr3 (21-168)||(17515310-17515457)
chr3 (21-168)||(23293167-23293314)
chr3 (79-174)||(35903819-35903914)
chr3 (49-168)||(53092623-53092742)
chr3 (79-168)||(28626411-28626500)
chr3 (21-166)||(43765139-43765284)
chr3 (79-163)||(2661908-2661992)
chr3 (79-168)||(7883328-7883417)
chr3 (49-168)||(23291570-23291689)
chr3 (24-155)||(35905712-35905843)
chr3 (49-168)||(46112487-46112606)
chr3 (79-168)||(611222-611311)
chr3 (21-165)||(42279510-42279654)
chr3 (49-167)||(2378953-2379071)
chr3 (24-165)||(2377032-2377173)
chr3 (49-173)||(44267976-44268100)
chr3 (52-158)||(23774162-23774268)
chr3 (99-168)||(30598337-30598406)
chr3 (107-168)||(7884927-7884988)
chr3 (79-165)||(42282473-42282559)
chr3 (98-168)||(51686413-51686483)
chr3 (87-169)||(48829355-48829437)
chr3 (24-90)||(7884873-7884939)
chr3 (48-158)||(23888776-23888886)
chr3 (48-158)||(40508915-40509025)
chr3 (48-158)||(48633887-48633997)
chr3 (79-165)||(54412547-54412633)
chr3 (21-122)||(46197766-46197867)
chr3 (88-168)||(600725-600805)
chr3 (62-158)||(2977347-2977443)
chr3 (68-112)||(25535273-25535317)
chr3 (99-158)||(17516993-17517052)
chr3 (49-168)||(21350575-21350694)
chr3 (48-110)||(23876982-23877044)
chr3 (48-158)||(45898352-45898462)
chr3 (79-168)||(46114105-46114195)
chr3 (21-114)||(48830803-48830896)
chr3 (78-158)||(41944586-41944666)
chr3 (21-93)||(44276193-44276265)
[»] chr2 (35 HSPs)
chr2 (21-168)||(6785978-6786125)
chr2 (21-168)||(37020508-37020655)
chr2 (43-168)||(24208061-24208186)
chr2 (21-174)||(39664745-39664898)
chr2 (79-173)||(24205593-24205687)
chr2 (79-168)||(14387349-14387438)
chr2 (32-168)||(16763076-16763212)
chr2 (21-168)||(40560223-40560370)
chr2 (79-168)||(16764611-16764700)
chr2 (24-168)||(19908246-19908391)
chr2 (21-168)||(14389081-14389228)
chr2 (79-168)||(37022185-37022274)
chr2 (23-168)||(44709744-44709889)
chr2 (79-174)||(2577480-2577575)
chr2 (21-173)||(2766929-2767081)
chr2 (79-168)||(40561878-40561967)
chr2 (21-165)||(17696209-17696353)
chr2 (79-168)||(6783364-6783453)
chr2 (21-164)||(42519202-42519346)
chr2 (79-168)||(16376736-16376825)
chr2 (49-169)||(39663153-39663273)
chr2 (69-169)||(6797506-6797606)
chr2 (56-168)||(19581414-19581526)
chr2 (49-165)||(19906685-19906801)
chr2 (21-168)||(39455169-39455316)
chr2 (99-169)||(34400313-34400383)
chr2 (24-119)||(16377197-16377292)
chr2 (79-174)||(39456780-39456875)
chr2 (127-168)||(42517558-42517599)
chr2 (32-131)||(11023001-11023100)
chr2 (107-165)||(6799436-6799494)
chr2 (62-154)||(37417287-37417379)
chr2 (48-158)||(11315339-11315449)
chr2 (48-122)||(26584821-26584895)
chr2 (73-165)||(37645490-37645582)
[»] scaffold1712 (1 HSPs)
scaffold1712 (79-168)||(982-1071)
[»] scaffold0081 (1 HSPs)
scaffold0081 (79-168)||(54258-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (24-165)||(1266-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (49-174)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (77-166)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (97-161)||(436272-436336)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 56477 - 56330
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||||||||||| |||||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  56477 acatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 56378  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  56377 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 20478189 - 20478042
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  20478189 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacg 20478090  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  20478089 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 27666042 - 27666189
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| |||||| | |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27666042 acatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27666141  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27666142 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 24 - 174
Target Start/End: Original strand, 29996494 - 29996644
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||||| |||||||| |||| || ||||||||  |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  29996494 tcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaa 29996593  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29996594 ttgaccgatttttcaaaattcaaggacgaatttgaggtattagtcgttttt 29996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 39859209 - 39859353
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||     
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 39859308  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  39859309 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 35402088 - 35401969
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35402088 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaagg 35401989  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||| ||||||||    
T  35401988 acgaatttgagatattagtc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 35403589 - 35403708
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  35403589 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaagg 35403688  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  35403689 acgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 20479719 - 20479808
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 37115503 - 37115650
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||||||||||||  ||||| |||||||||||||||||||| ||||| | ||||||| | |||||||||| |||    
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacg 37115602  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  | ||||||| ||||||||| |||||||||||||||||||||    
T  37115603 aatttgactgattttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 78014 - 78104
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtcc 78104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 6602479 - 6602334
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||  |      
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagt 6602380  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    || |||||||||| ||||||||||| |||||||||| |||||||||    
T  6602379 ttagccgattttttaaaattcaaggtcgaatttgagttattagtcc 6602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 27664549 - 27664433
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||    
T  27664549 acggagggactgatttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaagg 27664450  T
Q  149 acgaatttgaggtatta 165  Q
    || ||||||||||||||    
T  27664449 actaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 24228386 - 24228540
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||| |||  |||| |||| ||||||   ||||| ||||||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacg 24228485  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttta 175  Q
    || || ||| |||||| |||||||||| ||||| ||||||||||| || ||||||    
T  24228486 aatttggccaattttttaaaattcaagaacgaaattgaggtattaatcattttta 24228540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 13169653 - 13169772
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | ||||||||| ||||||||||||| || || |||||||||| |||||||||||    
T  13169653 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaagg 13169752  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  13169753 acgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 38474120 - 38474267
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||| ||||   |||||  | ||||||||||||||| ||||||| | ||||||||| ||||||||||||||    
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacg 38474219  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  ||||||||| ||||||| ||||| |||||||||||||||||    
T  38474220 aatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 34776903 - 34777036
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| |||||||||| | ||| || ||| |    
T  34776903 actaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggccaa 34777002  T
Q  132 tttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||| |||||| ||| |||||||||||||||||    
T  34777003 ttttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 30940402 - 30940550
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||||||| |||   ||||| | |||| ||||||||||||||||||| | ||||||||| |||||| || ||||    
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacg 30940501  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    || || |||||||||| |||||||||| || ||||| ||||||||||||    
T  30940502 aatttggccgattttttaaaattcaagaacaaatttaaggtattagtcc 30940550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 47384413 - 47384294
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||| |||||||||| ||||||||| |||||||| ||||||| || ||  ||||||||||||||||||    
T  47384413 acggagggactgatttgattgacattttgtaaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaagg 47384314  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  47384313 acgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 37796185 - 37796302
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    ||||||||||||  ||||| ||||||| |||||||||||||||||| | ||||||||| ||||||   ||||||| || || ||||||| ||||||||||    
T  37796185 gacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaag 37796284  T
Q  148 gacgaatttgaggtatta 165  Q
    ||| ||||||||||||||    
T  37796285 gacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 45359480 - 45359335
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| || ||||||||   ||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| ||||| |     
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggat 45359381  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||  ||||||||| |||||||| |||| ||||| ||||||||||||    
T  45359380 ttgaccgattttttaaaattcatggacaaatttaaggtattagtcc 45359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 39857764 - 39857648
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||| |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  39857764 acggagggactgatttgattgacattttgtaaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 39857665  T
Q  149 acgaatttgaggtatta 165  Q
    |||||||||||||||||    
T  39857664 acgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  108 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 47386186 - 47386333
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||||||  |||   ||||| |||||||||||||||| || |||||| |  |||||||| |||||||| |||||    
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacg 47386285  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  | ||||||| |||||| ||||||||||||||||||||||||    
T  47386286 aatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 37114060 - 37113936
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||| ||||||||| | ||||||||| |||||||||||| ||| ||  || |||||| |||||||||||    
T  37114060 acggagggactgatttgattgacattttgtaaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaagg 37113961  T
Q  149 acgaatttgaggtattagtcctttt 173  Q
    |||||||||||||||||||| ||||    
T  37113960 acgaatttgaggtattagtcttttt 37113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 24226700 - 24226582
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| |||| || | | ||||||| |||||||| ||||||| || |||||||||| |||||||||||    
T  24226700 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaagg 24226601  T
Q  149 acgaatttgaggtattagt 167  Q
    |||||||||||||||||||    
T  24226600 acgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 13168267 - 13168142
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattc---agggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||| |||||||||  |||| |||||| ||||   ||||| |||||||||||||||||   ||||||||| | ||||||||| |||||||| |||||    
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacg 13168168  T
Q  121 aaatttgccgatttttcaaaattcaa 146  Q
    || || |||||||||| |||||||||    
T  13168167 aatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 23904672 - 23904582
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||| ||||||| | | ||||| | ||||||||| |||||| ||  ||||||||| ||||||||||||||||||||||||||||||||    
T  23904672 aaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtcc 23904582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 38549618 - 38549546
Alignment:
Q  97 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||||  |||||||||||||||| || || ||||||| ||||||||||||||||||| ||||||||||||    
T  38549618 gatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtcc 38549546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||||||||||||| | | ||||||| |||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaac-aaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 22155817 - 22155936
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||    
T  22155817 acggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaagg 22155916  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||| || |||||||||||    
T  22155917 acgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 22211732 - 22211851
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||    
T  22211732 acggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaagg 22211831  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||| || |||||||||||    
T  22211832 acgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 23906295 - 23906357
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    |||||| ||||||||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtcc 23906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||||||||| || | ||||||||| ||||||||  |||||| ||  ||||||||| ||||||||| ||||||||||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 46437176 - 46437107
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| ||||||||  |||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  46437176 tatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 46437107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 33038801 - 33038911
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| ||||||||| |||||||||||||||| ||||||||||| | |||| ||||| ||| ||  ||||    | ||||||||||    
T  33038801 gacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaag 33038900  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  33038901 gacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 35691496 - 35691431
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 164  Q
    ||||||| |||||| || |||||| ||  ||||||||| |||||||||||||||||||||||||||    
T  35691496 tatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 35693347 - 35693450
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatt--tgatatttcgaaaaattcaggga 118  Q
    |||||||||| |||||| ||  |||| || ||||||||   ||||| ||||||||||||||||||||||||||||   |||||| || |||||||| |||    
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaagga 35693446  T
Q  119 cgaa 122  Q
    ||||    
T  35693447 cgaa 35693450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 366818 - 366747
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 119  Q
    ||||||||||   ||||||  ||||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  366818 gacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatatttcaaaaaactgagggac 366747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 7402000 - 7401949
Alignment:
Q  61 atttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 112  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||| |||||    
T  7402000 atttgatggacgtctgttaaattcagggacgaatttgatatttcgataaatt 7401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 45463806 - 45463707
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  45463806 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccga 45463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 46996706 - 46996816
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  |||||||| |||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||| |    
T  46996706 gacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagg 46996805  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  46996806 gacgaatttga 46996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  78 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgag 159  Q
    |||||||||||||||| | | ||||||| |||||| ||||||||| ||    ||||||| |||||||||||||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 34775087 - 34774998
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| | | ||||| | |||||||| | | ||| ||  ||||||||| ||||||||| |||||||||||| ||||||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtc 34774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 45361304 - 45361365
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||| || |||||  || |||||| |||||||||||| ||||||||||||||||||    
T  45361304 aaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 47341712 - 47341800
Alignment:
Q  70 acgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    |||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||||||||    
T  47341712 acgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaatttga 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 168
Target Start/End: Original strand, 35693434 - 35693465
Alignment:
Q  137 caaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||||||    
T  35693434 caaaattcaaggacgaatttgaggtattagtc 35693465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 27955490 - 27955380
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||||  | ||| ||||||||||| |||||| ||||| ||| || || |||   | ||||||||||    
T  27955490 gacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaag 27955391  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  27955390 gacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 38613505 - 38613595
Alignment:
Q  68 ggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    |||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||| ||||||||||||||    
T  38613505 ggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttga 38613595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 13018085 - 13018036
Alignment:
Q  116 ggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||||| || || ||||||| |||||||||||| |||||||||||||||    
T  13018085 ggacgaatttggctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 27691301 - 27691150
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| | |||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27691301 acatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27691202  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 172  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27691201 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 27691150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 27406894 - 27407044
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||| |||||    
T  27406894 acatcatcactgttaacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacg 27406993  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 171  Q
    ||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  27406994 aaattggccaatttttcaaaattcaaggactattttgaggtattagtcctt 27407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 33708801 - 33708954
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  33708801 acatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacg 33708900  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttta 175  Q
    |||||  ||| ||||| |||||||||||| |||||||||||||||||||| ||||    
T  33708901 aaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtcctattta 33708954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 13282625 - 13282478
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||| |||||| ||||||||||||||||||| | ||||||||| ||||||||||||||    
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 13282526  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || |||||||||| |||||||||||||||||||||||||||||||    
T  13282525 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 601704 - 601793
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 15305944 - 15305815
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||     
T  15305944 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggaca 15305845  T
Q  121 aaatttgccgatttttcaaaattcaaggac 150  Q
    |||||  || ||||||||||||||||||||    
T  15305844 aaattgaccaatttttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 15486313 - 15486184
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||     
T  15486313 acatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggaca 15486214  T
Q  121 aaatttgccgatttttcaaaattcaaggac 150  Q
    |||||  || ||||||||||||||||||||    
T  15486213 aaattgaccaatttttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 8609787 - 8609931
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 8609886  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||| ||||||||||||||||||||    
T  8609887 ttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 13108336 - 13108480
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| ||||||| |  |||| |||||||||||   ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  13108336 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 13108435  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||| ||||||||    
T  13108436 ttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 33762713 - 33762807
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 173  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcatttt 33762807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 29239187 - 29239276
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 29239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 38547372 - 38547228
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| || ||||||||   ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |     
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtat 38547273  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||| ||||||||||||||    
T  38547272 ttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 27692837 - 27692926
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 38548831 - 38548920
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 176
Target Start/End: Complemental strand, 8608357 - 8608229
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt-cagggacgaaatttgccgatttttcaaaattcaag 147  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||    
T  8608357 acggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaag 8608258  T
Q  148 gacgaatttgaggtattagtcctttttat 176  Q
    ||||||||| |||||||||||||||||||    
T  8608257 gacgaatttaaggtattagtcctttttat 8608229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 33707295 - 33707207
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 42941921 - 42941777
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||| | ||||||||| ||||| ||||||||||||  ||||| |||| ||||||||||||||||||||| |  |||||||  ||||||||||||||    
T  42941921 acatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacg 42941822  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || || || ||||||| ||||||||||||||||||||||||||||    
T  42941821 aatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 33761188 - 33761069
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |    
T  33761188 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaag 33761089  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  33761088 acgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 35509303 - 35509214
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 35510789 - 35510908
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||    
T  35510789 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaagg 35510888  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  35510889 acgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 49 - 165
Target Start/End: Original strand, 13283965 - 13284081
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  13283965 acggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaagg 13284064  T
Q  149 acgaatttgaggtatta 165  Q
    ||||||||| |||||||    
T  13284065 acgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 41825641 - 41825785
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||||||||||| ||  |||| ||||||| |||   ||||| |||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 41825740  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || ||    ||||||| ||||||||||||||||||||||||||||    
T  41825741 aatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 41042581 - 41042728
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||| ||||| |||||||||||||||||||| | ||||||||  |||||||||||||     
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggaca 41042680  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || ||| |||||| |||||||||||||| |||| |||||||||||    
T  41042681 aatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 42943396 - 42943515
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  42943396 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 42943495  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  42943496 acgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 22272483 - 22272332
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| || |||||||||  ||||| |||||| ||||||||||||||||||| | |||||| || ||||||||||||||    
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacg 22272384  T
Q  121 aaatttgccga--tttttcaaaattcaaggacgaatttgaggtattagtcct 170  Q
    || ||  | ||  ||||| ||||||||| |||||||||||||||||||||||    
T  22272383 aatttgactgattttttttaaaattcaaagacgaatttgaggtattagtcct 22272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 26242311 - 26242455
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||| | |||||||||  |||| |||||||||||   ||||| ||||||||||||||||||| |||||| | ||||||||| |||||| |||||||    
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacg 26242410  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || || || ||||||| |||||||||| ||||| |||||||||||    
T  26242411 aatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 13486096 - 13486243
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||||||| |||  |||| ||| |||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||| ||| ||||    
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacg 13486195  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||  |  ||||||||| |||||||||| || |||||||||||||||||    
T  13486196 aatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 27404299 - 27404213
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  27404299 aaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 18645813 - 18645752
Alignment:
Q  169 ctttttataatagcaaatgtgctttaaactcctttagtatcgcttagatcatcaaccgaact 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645813 ctttttataatagcaaatgtgctttaaactcctttagtatcgcttagatcatcaaccgaact 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 7745109 - 7745256
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| || ||||||||   ||||| ||| ||||||||||| |||||||||| |  |||||||| ||||||||| ||||    
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacg 7745208  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || || ||||||| ||||||||| |||||||||||| ||||||||    
T  7745209 aatttggctgatttttgaaaattcaaagacgaatttgagatattagtc 7745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 26238845 - 26238726
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    |||||||||||||||||| |||| | |   ||||||  ||||||| | ||||||||| |||||||||||||||| || || ||||||| |||||||||||    
T  26238845 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaagg 26238746  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  26238745 acgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 34681074 - 34681156
Alignment:
Q  87 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 34681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 5036544 - 5036446
Alignment:
Q  69 gacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    ||||||||||||||||| ||||||| | ||||||||  |||||||||||||||| ||  | ||||||| |||||| |||||||||||||||||||||||    
T  5036544 gacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 22273861 - 22273980
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | ||||||| | ||||||||| ||| || || |||||||||| |||||||||||    
T  22273861 acggagggactgatttgattgacattttgtaaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaagg 22273960  T
Q  149 acgaatttgaggtattagtc 168  Q
    || |||||||||||||||||    
T  22273961 acaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 41824009 - 41823890
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    |||||||||||||||||| | || | |   ||||||  ||||||| | ||||||||| |||||||| |||||||||| || ||||||| |||||||||||    
T  41824009 acggagggactgatttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaagg 41823910  T
Q  149 acgaatttgaggtattagtc 168  Q
    |||||||| |||||||||||    
T  41823909 acgaatttaaggtattagtc 41823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 9673162 - 9673296
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||||| |  ||||||||||||||||   ||||| |||||||||||||||||||||| ||| | ||||||||  ||||||||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacg 9673261  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatt 155  Q
    || || ||  |||  | || |||||||||||||||    
T  9673262 aatttagctaattgatgaagattcaaggacgaatt 9673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 600819 - 600759
Alignment:
Q  109 aattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtcc 600759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 13484613 - 13484545
Alignment:
Q  100 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||| ||||||||||||| |||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtc 13484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 5038032 - 5038150
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | | ||||||| |||||||| | ||||| ||  ||||||||| ||||||||| |    
T  5038032 acggagggactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-g 5038130  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  5038131 acgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 43262145 - 43262226
Alignment:
Q  87 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| | ||||||||| |||||| |||| |||| || || ||||||| |||||| ||||||||||||||||||||||||    
T  43262145 ggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 28433751 - 28433830
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| || ||||||  || |||||||| ||||||| ||||    
T  28433751 aaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaattcagggacgaaattga 28433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 31821538 - 31821428
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  |||||| |||||||| ||||||||||| | |||| ||||||||| ||  ||||  | | |||||||| |    
T  31821538 gacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattcagg 31821439  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  31821438 gacgaatttga 31821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 41040781 - 41040720
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||  ||||| || |||||||||| ||||||||| ||| |||||||||||||||||    
T  41040781 aaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 40339677 - 40339760
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttc 104  Q
    ||||||||||||||||||||  |||| || | ||||||   ||||| |||| ||||||||||||| ||||||| | ||||||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttc 40339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 11788441 - 11788367
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    ||||||||||   |||||| |||||||||| ||||||  |||| ||||||||||||||| |||||  ||||||||    
T  11788441 gacggagggatgaatttgatggacgtctgttaaattcgaggacaaatttgatatttcgataaattaggggacgaa 11788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 40020623 - 40020713
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  |||||  ||||||||    
T  40020623 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaa 40020713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 42897778 - 42897888
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||| ||||||| ||||||||||  | |||| ||||||||| || |||||    | ||||||||||    
T  42897778 gacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattcaag 42897877  T
Q  148 gacgaatttga 158  Q
    |||| ||||||    
T  42897878 gacggatttga 42897888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 33750419 - 33750472
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgat 132  Q
    ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||||    
T  33750419 aaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 37526027 - 37526084
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcg 105  Q
    |||||||||||   ||||| ||| ||||| |||||||||||||||| |||||||||||    
T  37526027 gacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcg 37526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 462388 - 462484
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||| |||||| ||  ||||||| ||||||| ||||||||||| | |||| | ||| ||| || |||||| | | ||||||||| |||||||||||    
T  462388 tttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattcaatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 9184482 - 9184446
Alignment:
Q  69 gacgtctgtaaaattcagggactaatttgatatttcg 105  Q
    ||||||||  |||||||||||||||||||||||||||    
T  9184482 gacgtctgacaaattcagggactaatttgatatttcg 9184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 32822467 - 32822371
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||| |||| ||||  ||||||||||||||| |||||||||  || |||| ||||| ||| || ||||||   | |||||||||||||||| ||||    
T  32822467 tttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattcaaggacgaagttga 32822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 33160166 - 33160262
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||| || ||||||  |||||||| |||||| ||||||||||  | |||| ||||| ||| || |||||  | | |||||||||||||||||||||    
T  33160166 tttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggacgaatttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 29621758 - 29621905
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29621758 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 29621857  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| |||||||||||||||||||| ||| | |||||||||||||||    
T  29621858 aaattggccgatttttcaaaattcaatgactattttgaggtattagtc 29621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 42473584 - 42473735
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  ||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  42473584 acatcatcactgttaacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacg 42473683  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 172  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  42473684 aaattggccgatttttcaaaattcaaggactattttgaggtattagtccttt 42473735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 40780697 - 40780553
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  40780697 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 40780598  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||  ||||||||||||||||||||||| | ||||||||||||    
T  40780597 aaattgtccgatttttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 2854304 - 2854450
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| ||| |||| |||| |||||||||||  |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2854304 acatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacg 2854402  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||    
T  2854403 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 24541188 - 24541336
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactga-tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 119  Q
    |||||||||||| |||  ||| |||| ||||||||   ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24541188 acatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 24541287  T
Q  120 gaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24541288 gaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 17574462 - 17574318
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 17574363  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  17574362 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 36057590 - 36057738
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| | |||||||  |||| |||||||||||   ||||| ||||||||||||||||||||| |||| | ||||||||| ||||||||||||||    
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacg 36057689  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    || || |||||||||| ||||||||||||||||||||||||||||||||    
T  36057690 aatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 36057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 7267987 - 7267841
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| ||||||||||    ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||     
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaat 7267888  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcct 170  Q
    || | |||||||| |||||||||||||||||||||||||||||||||    
T  7267887 ttggacgattttttaaaattcaaggacgaatttgaggtattagtcct 7267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 40782211 - 40782300
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 7269446 - 7269541
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtcattttt 7269541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 29620227 - 29620138
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  29620227 aaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 2853005 - 2852886
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  2853005 acggagggactgatttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaagg 2852906  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  2852905 acgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 21842962 - 21843081
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||| |||| |||||  |||||||||||||||||||||    
T  21842962 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaagg 21843061  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  21843062 acgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 34327782 - 34327635
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| ||||||| |||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||| ||||    
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacg 34327683  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || ||| |||||  |||||||||||||||||||||||||||||||    
T  34327682 aatttggccaattttagaaaattcaaggacgaatttgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 2179931 - 2179787
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| ||||| |||  |||| |||||||||||   ||||| ||| |||||||||||||||||| ||| | ||||||||  ||||||||||||||||     
T  2179931 tcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaat 2179832  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||  ||||||||| ||||||||||||| |||||||||||||||||    
T  2179831 ttgaccgattttttaaaattcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 12738706 - 12738825
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  12738706 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaagg 12738805  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  12738806 acgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 12801529 - 12801648
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||    
T  12801529 acggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaagg 12801628  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  12801629 acgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 8541241 - 8541363
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||| |    
T  8541241 acggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatg 8541340  T
Q  149 acgaatttgaggtattagtcctt 171  Q
    |||||||||||||||||||||||    
T  8541341 acgaatttgaggtattagtcctt 8541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 17577905 - 17578022
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| | ||||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||    
T  17577905 acggagggactgatttgattgacattttgtaaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaagg 17578004  T
Q  149 acgaatttgaggtattag 166  Q
    ||||||||||||||||||    
T  17578005 acgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 30468260 - 30468405
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||||| |||||| || ||||||     
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaat 30468359  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||  || |||||| |||||||||||||||| ||||||||| |||||    
T  30468360 ttgaccaattttttaaaattcaaggacgaaattgaggtatcagtcc 30468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 42471637 - 42471548
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  42471637 aaattcatgtactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 42471548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 8539811 - 8539675
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||  |||| || |||| ||||  ||||| |||||| ||||||||||||||||||| | ||||||||| |||||||| | ||||| ||    ||    
T  8539811 actaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattga 8539712  T
Q  132 tttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  8539711 tttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 18624985 - 18625129
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||||||||||||||  |||| |||||| ||||   ||||| |||||  ||||||||||||||||||| | ||||||||  ||||||||||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacg 18625084  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || || || |||   | ||||||||||||||||||||||||||||    
T  18625085 aatttagctgatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 28813765 - 28813856
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga--tttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| | ||||||||| |||||||| ||||||| || ||| |  |||||  ||||||||||||||||||||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 28822111 - 28822176
Alignment:
Q  100 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||| |||||||||||||||| ||  || |||||| ||||||||||||||||||||||||||||    
T  28822111 atttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 34328855 - 34328916
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||| ||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  34328855 aaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  77 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||| || || ||||||| |||||| ||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 18728606 - 18728716
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||| |    
T  18728606 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcagg 18728705  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  18728706 gacgaatttga 18728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 38596974 - 38596878
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||| ||||||||   ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||||||||||||||||    
T  38596974 tttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatttga 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 27075927 - 27075876
Alignment:
Q  61 atttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 112  Q
    |||||| |||||||||| ||||||||| ||||||||||||||| ||||||||    
T  27075927 atttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaatt 27075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 32087634 - 32087560
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    |||||||||||   ||||| ||||||||| |||||| ||||||||| ||||||||||| | |||| |||||||||    
T  32087634 gacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaa 32087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| | |||||||   ||||||||  |||||| || |  ||||||| ||||||||| ||| |||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 41493931 - 41493847
Alignment:
Q  81 attcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||| ||||||| | ||||||||  ||||||   ||||||| || || ||||||| |||||||||||||||| |||||||||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 35395453 - 35395343
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| ||||||||   ||||||||| ||||| ||||||||||| | |||| ||||||||| || |||||  | | |||||||| |    
T  35395453 gacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagg 35395354  T
Q  148 gacgaatttga 158  Q
    || ||||||||    
T  35395353 gatgaatttga 35395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 28819388 - 28819348
Alignment:
Q  128 ccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||| |||||||||||| |||||||| |||||||||    
T  28819388 ccgatttttaaaaattcaaggaggaatttgatgtattagtc 28819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 8e-59; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 9121645 - 9121792
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9121645 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacg 9121744  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  9121745 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 9121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 33602621 - 33602765
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33602621 acatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacg 33602720  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  33602721 aaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 47013059 - 47013206
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  47013059 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 47013158  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||  ||||||||||||||||||||||| | |||||||||||||||    
T  47013159 aaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 46583533 - 46583680
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| | |||||||| |||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 46583632  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||    
T  46583633 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 4855946 - 4856090
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| | |||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 4856045  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  4856046 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 34778118 - 34778262
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 34778217  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  34778218 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 46582129 - 46582010
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46582129 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 46582030  T
Q  149 acgaatttgaggtattagtc 168  Q
    || |||||||||||||||||    
T  46582029 acaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 8169568 - 8169657
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 37345932 - 37346053
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  37345932 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaagg 37346031  T
Q  149 acgaatttgaggtattagtcct 170  Q
    ||||||||||||||||||||||    
T  37346032 acgaatttgaggtattagtcct 37346053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 2869726 - 2869579
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| |||||||||||   ||||| |||||||||||||||| || |||||| | ||||||||| ||||||||||||||    
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacg 2869627  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  ||||||||| |||||||||||||||||||||||||||||||    
T  2869626 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 8168029 - 8167942
Alignment:
Q  81 attcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8167942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 25276861 - 25276742
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  25276861 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaagg 25276762  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  25276761 acgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 9120128 - 9120039
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  9120128 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 27089279 - 27089368
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 6818658 - 6818802
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||| |  |||| |||||||||      
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagt 6818757  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  6818758 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 25278348 - 25278492
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||| ||||||||||| ||||||| | | ||||||| ||||||||||||||||     
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaat 25278447  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  25278448 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 31238475 - 31238619
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| ||| || ||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||     
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 31238574  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| ||||||||||||| |||||||||||||||||    
T  31238575 ttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 37344486 - 37344339
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||| |||||||||||  |||||| | | ||||||| ||||||||||||||||     
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaat 37344387  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 171  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  37344386 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtcctt 37344339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 47011545 - 47011456
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 27087430 - 27087283
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||| || |   ||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||||||     
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggac- 27087332  T
Q  121 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  27087331 aaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 25278977 - 25279084
Alignment:
Q  68 ggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    |||||||||||||||||||||||||| | ||||||||| |||||| ||| ||||| || || ||||||| ||||||||||||||||||||||||||||||    
T  25278977 ggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagt 25279076  T
Q  168 ccttttta 175  Q
    | ||||||    
T  25279077 cattttta 25279084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 4854499 - 4854409
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtcc 4854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 1444181 - 1444270
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| | |||||||||||||||    
T  1444181 aaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtattagtc 1444270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 51896129 - 51896276
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| ||||||||||||  ||||| |||| ||||||||||||||||||||| | ||||||||| |||||||||||||     
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac- 51896227  T
Q  121 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| | ||||||| |||||| ||||||| ||||||||||| ||||    
T  51896228 aaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 3013447 - 3013600
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacg------gacgtctgtaaaattcagggactaatttgatatttcgaaaaattca 114  Q
    |||||||||| |||||||||  |||| ||||||||||||  ||||| |      ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  3013447 acatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 3013546  T
Q  115 gggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
     ||||||| ||  | ||| ||| |||||||||||||||||||||||||||||||    
T  3013547 tggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 50556078 - 50556221
Alignment:
Q  25 catcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaat 124  Q
    |||||| |||||||||  |||| |||||||||||   |||||  ||||||||||||||| ||||||||| | ||||||||| ||||||||| |||||| |    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatt 50556177  T
Q  125 ttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |  | ||||||| ||||||||| |||||||||||| ||||||||    
T  50556178 tgactgattttttaaaattcaaagacgaatttgagatattagtc 50556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||| ||||| | ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggac-aaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 33599307 - 33599229
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttg 157  Q
    |||||||| || ||||||||||||||| |||||||| ||||||| ||  ||||||||||||||||||||||||||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 52641958 - 52641888
Alignment:
Q  98 atatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||| |||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  52641958 atatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 1442668 - 1442599
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggac 90  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  1442668 acatcatcactgttaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggac 1442599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 2871096 - 2871165
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||    
T  2871096 tatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtc 2871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 52643648 - 52643736
Alignment:
Q  77 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||||||||||||||| |  |||||||| |||||||||||||||| ||  | ||||||| |||||| |||||||||||||||||||||    
T  52643648 taaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 15104588 - 15104487
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||| |||  |||| |||||| ||||   ||||| |||||||||||||||||||||||||| | ||||||||| |||||||||| |||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacg 15104489  T
Q  121 aa 122  Q
    ||    
T  15104488 aa 15104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 33599248 - 33599187
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  33599248 aaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtc 33599187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 37088156 - 37088225
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| |||||||||| ||||| || |||||||||| |||||||||||| ||||||||||||||||||    
T  37088156 tatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 1442611 - 1442551
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||    
T  1442611 aaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 6816926 - 6816866
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  6816926 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 50554224 - 50554164
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  50554224 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||||| |||||| | ||||||||| |||||||||| ||||| ||  | ||||||| |||||| |||||||||||||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  88 gactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| | ||||||||| ||||||||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggac-aaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 23577725 - 23577636
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||  |||||||||||||||||| |||||| | || |||||||  |||||||||||  ||| ||||| |||||||| |||||||||    
T  23577725 aaattcattgactaatttgatatttcgcaaaattgaaggtcgaaattgcccgatttttcaggattgaaggatgaatttgatgtattagtc 23577636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 51894686 - 51894570
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaag 147  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| |  |||||||| ||||||||| ||| ||||||| || |||||| ||||||||||    
T  51894686 acggagggactgatttgattgacattttgtaaattcagggactaaatatatatttcgcaaaattcagagac-aaatttgacccattttttaaaattcaag 51894588  T
Q  148 gacgaatttgaggtatta 165  Q
     |||||||||| ||||||    
T  51894587 aacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  108 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| |   || |||||| |||||||||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 42134602 - 42134492
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | ||||||||||    
T  42134602 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaag 42134503  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  42134502 gacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 5783500 - 5783427
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcg 105  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||    
T  5783500 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 5783427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 18183961 - 18184017
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 118  Q
    ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  18183961 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 18184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 36895528 - 36895588
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| | |||||||    
T  36895528 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaa 36895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 43519571 - 43519423
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| ||| |||| |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43519571 acatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 43519472  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43519471 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 43519423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 4173710 - 4173830
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||| ||||  ||||| |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4173710 acggagggactgagttgattgacgttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 4173809  T
Q  149 acgaatttgaggtattagtcc 169  Q
    |||||||||||||||||||||    
T  4173810 acgaatttgaggtattagtcc 4173830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 43507286 - 43507167
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43507286 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43507187  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  43507186 acgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 43508623 - 43508742
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43508623 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 43508722  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  43508723 acgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 49523271 - 49523125
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||| | |||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacg 49523172  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    || || |||||||||| ||||||||| ||||||||||||||||||||    
T  49523171 aatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 41761723 - 41761867
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||||| |  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||  ||||||    
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacg 41761822  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  41761823 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 319362 - 319273
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 5437900 - 5437811
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  5437900 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 33265980 - 33266100
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||     
T  33265980 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaga 33266079  T
Q  149 acgaatttgaggtattagtcc 169  Q
    ||||||||||| |||||||||    
T  33266080 acgaatttgagatattagtcc 33266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 33264501 - 33264382
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||| ||||||||||||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  33264501 acggagggactgatttgattgacattttgtaaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 33264402  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  33264401 acgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 51013856 - 51013975
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||| ||||||||||| | |||||||||||||||||||  |||||||||||||||||||||    
T  51013856 acggagggactgatttgattgacattttgtaaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 51013955  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  51013956 acgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 833312 - 833223
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  833312 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 5439647 - 5439736
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  5439647 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 320903 - 320989
Alignment:
Q  82 ttcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||| ||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 4169775 - 4169686
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||||||||||||||||||||||||||||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtc 4169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 51012070 - 51011926
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    |||||||||||||| ||  |||| |||||||||||   ||||| ||||||||||||||||||| |||||| | ||||||||| |||||||| | | |||     
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaat 51011971  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||  ||||||||| |||||||||||||||||||||| ||||||||    
T  51011970 ttgaccgattttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 835012 - 835131
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||| ||||||  ||||| |   |||||||||||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaagg 835111  T
Q  149 acgaatttgaggtattagtc 168  Q
    || | |||||||||||||||    
T  835112 actattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 41781686 - 41781530
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||  |||||||||  |||| |||||||||||   ||||| ||| |||||||||||||||||||||| |  |||||| | |||||||||||||     
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggac- 41781588  T
Q  121 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtcctttttata 177  Q
    ||||||| ||||||||| |||||||||| || ||||||||||||||||| || |||||    
T  41781587 aaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtcattattata 41781530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 35401868 - 35401749
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| ||||||| | ||||||||  |||||||||||||||| || |||||||||| |||||||||||    
T  35401868 acggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaagg 35401769  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  35401768 acgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 49524733 - 49524822
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 35404425 - 35404569
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||| ||||   ||||  |||||||||||||||||||||| ||| |  |||||||| |||||| | |||||||     
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaat 35404524  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||| | |||| |||||||||||||    
T  35404525 ttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 48813934 - 48813786
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| || ||| ||  |||| |||| ||||||   ||||| |||||||| ||||||||||| ||||| |  |||||| | ||||||||||||      
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggata 48813835  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    || || || ||||||| ||||||||||||||||||||||||||||||||    
T  48813834 aatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcc 48813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||||||||||||| | | ||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtat 163  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||  | |||||||||||||||||| || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 20493946 - 20493827
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||| ||||| | ||||||||| |||||||| | ||||| || |||||| ||| ||||||||| |    
T  20493946 acggagggactgatttgattgacattttgtaaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatg 20493847  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  20493846 acgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 48645336 - 48645255
Alignment:
Q  87 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| | ||||||||| |||||||| ||||||| ||  | ||||||| |||||||||||||||||||||||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 48646724 - 48646852
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||||| |  |||| |||||| ||||   ||||| | | |||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacg 48646823  T
Q  121 aaatttgccgatttttcaaaattcaagga 149  Q
    || || || || |||| ||||||||||||    
T  48646824 aatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 11254188 - 11254113
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||||||| |||||| || |||| | || |||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  11254188 tatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatttgtcattttt 11254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 11601786 - 11601674
Alignment:
Q  52 gagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggac 150  Q
    ||||||||  ||||| ||||||||||||||||||||||||||| | |||||| | ||||||  ||||  ||||||| | ||||||| |||||||||| ||    
T  11601786 gagggactattttgatggacgtctgtaaaattcagggactaatat-atattttgcaaaatttgggga-taaatttgactgatttttgaaaattcaagaac 11601689  T
Q  151 gaatttgaggtatta 165  Q
    |||||| ||||||||    
T  11601688 gaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 42980782 - 42980684
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 119  Q
    |||||||||| |||||| ||  |||| |||||||||||   ||||| |||||||||||||||| ||||||||| | || |||||| |||||||| ||||    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggac 42980684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 39083775 - 39083676
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || |||||    
T  39083775 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccga 39083676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 2691463 - 2691368
Alignment:
Q  78 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    |||||||||||||||| | ||||||| | ||||||   ||||||| || || ||||||| ||||||||| || ||| ||||||||||| ||||||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa-gatgaagttgaggtattattccttttt 2691368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 44558511 - 44558607
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||| ||||    
T  44558511 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttga 44558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 5484676 - 5484577
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  5484676 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 5484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 39921630 - 39921531
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39921630 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 43779855 - 43779954
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  43779855 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 43779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 20820075 - 20819986
Alignment:
Q  78 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    |||||||||||||||| |  |||||| | |||||| ||| |  ||||||| | ||||||| |||||||||||||||| |||||||||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaat-aaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 52868176 - 52868254
Alignment:
Q  71 cgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagga 149  Q
    ||||||| |||||||| |||||| | ||||||||| |||||| |  |||||| ||  ||||||||| ||||||||||||    
T  52868176 cgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 39189516 - 39189419
Alignment:
Q  34 taacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39189516 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39189419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 42982472 - 42982541
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| |||||||||||||||| ||  | ||||||| ||||||||||||  ||||| | |||||||||    
T  42982472 tatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaaggaaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 44794765 - 44794838
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    ||||||||||   ||||| |||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  44794765 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 44794838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 2693285 - 2693373
Alignment:
Q  77 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||||||  |||||| | ||||||||| |||||| ||| |  || || || ||||||| ||||||||| |||||| |||||||||||    
T  2693285 taaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 112; Significance: 2e-56; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 3441 - 3294
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| |||||||| |||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 3342  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3341 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 4613 - 4466
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| |||||||| |||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 4514  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4513 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 14313 - 14432
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14313 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaagg 14412  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  14413 acgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 32455868 - 32456016
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  32455868 acatcatcattattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacg 32455967  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    |||||  ||||||||||||||||||||||| | ||||||||||||||||    
T  32455968 aaattgaccgatttttcaaaattcaaggactattttgaggtattagtcc 32456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 3456893 - 3456766
Alignment:
Q  23 atcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3456893 atcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 3456794  T
Q  123 atttgccgatttttcaaaattcaaggac 150  Q
    ||| ||||||||||||||||||||||||    
T  3456793 attggccgatttttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 13613559 - 13613706
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||| |||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13613658  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  ||||||||||||||||||||||||||||| |||||||||||    
T  13613659 aatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 32518467 - 32518586
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  32518467 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaagg 32518566  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  32518567 acgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 32439071 - 32439215
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    |||||||||||||| ||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 32439170  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||  ||||||||| ||||||||| ||| |||||||||||||||||    
T  32439171 ttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 3480657 - 3480746
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  3480657 aaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 32454337 - 32454248
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  32454337 aaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 20523513 - 20523367
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 20523414  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    || ||  ||||||||| ||||||| |||| |||||||| ||||||||    
T  20523413 aatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 32517021 - 32516877
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||| ||||||||||| || |||| | | ||||| | ||||||||||||||||     
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaat 32516922  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  32516921 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 10568546 - 10568403
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||||||||||||  |||||  ||||||||||||||||||||||||| |  ||||||||  ||||||| |||||    
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacg 10568447  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 164  Q
    || ||  | ||||||| ||||||||||||||||||||| |||||    
T  10568446 aatttgactgatttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 18645074 - 18645192
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| ||||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||    
T  18645074 acggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagagacgaattgt-ccgatttttcaaaattcaagg 18645172  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  18645173 acgaatttgaggtattagtc 18645192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 7372935 - 7373079
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||| |||  |||| |||||||||||   ||||| ||||| |||||||||||||||||||| |  |||||||| ||||||||||||||    
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacg 7373034  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || ||  || |||||| |||||||||  |||||||||||||||||    
T  7373035 aatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 11355366 - 11355223
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||| ||||  |||| |||||||||||   ||||  || ||||||||||||||||||| | | | ||||||||  ||||||||| ||||||     
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaat 11355267  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagt 167  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||    
T  11355266 ttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 13610771 - 13610690
Alignment:
Q  87 ggactaatttgatatttcgaaaaattcagggacgaaatttgc-cgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||    
T  13610771 ggactaatttgatatttcgcaaaattcagggac-aaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| |||||||||| ||||||||| |||||||| ||| ||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 11357164 - 11357289
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| |||||||||||    
T  11357164 acggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaagg 11357263  T
Q  149 acgaatttgaggtattagtccttttt 174  Q
    |||||||||| ||||||||| |||||    
T  11357264 acgaatttgatgtattagtctttttt 11357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 10569888 - 10570008
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    ||||||||||||||||||| |||| | |   ||||||  ||||||| | ||||||| | |||||||| ||||||| || || ||||||| ||||||||||    
T  10569888 gacggagggactgatttgatggacattttgtaaattcgaggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaag 10569987  T
Q  148 gacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||    
T  10569988 gacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  100 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 6899632 - 6899485
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||  |||||||||  |||| |||| ||||||   ||||| ||| |||||||||||| ||||||||| | ||||||||  |||||| || ||||    
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacg 6899533  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  | ||||||| ||||||||||||| |||||||||||||||||    
T  6899532 aatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| ||||||||||||| || || |||||||||| |||||||||||||||| ||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 6902868 - 6902996
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    |||||||||||||||||| |||| | |   ||||||  ||||||| | |||||| || |||||| ||||||||| ||  | ||||||| |||||||||||    
T  6902868 acggagggactgatttgatggacattttgtaaattcgaggactaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaagg 6902966  T
Q  149 acgaatttgaggtattagtcctttttataata 180  Q
    ||||||||||||||||||||  ||||||||||    
T  6902967 acgaatttgaggtattagtc--ttttataata 6902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 9398807 - 9398713
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcag 115  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||| | |||||| ||||||||||||||||| | ||||||||| |||||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 8605353 - 8605414
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| ||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  8605353 aaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 8605414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 20525304 - 20525432
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| |||| || | | ||||| | |||||||||||| ||| ||  || |||||| ||||||||| |    
T  20525304 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaag 20525403  T
Q  149 acgaatttgaggtattagtcctttttata 177  Q
    |||||||||||||||||||| ||||||||    
T  20525404 acgaatttgaggtattagtcgtttttata 20525432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 7049904 - 7049828
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttg 97  Q
    |||||||||| || ||||||  |||| |||||||||||   ||||| ||||||||||||||||||||||| ||||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggacgaatttg 7049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 14338480 - 14338584
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||   ||||| |||||||||| |||||||||||  |||| || |||||| ||||||   ||||||| || || ||||||| |||||||||||    
T  14338480 acggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaagg 14338579  T
Q  149 acgaa 153  Q
    |||||    
T  14338580 acgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 3018450 - 3018519
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    
T  3018450 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 3018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 164  Q
    |||||||||||||||| || || ||||||| |||||||||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 21068744 - 21068628
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||  ||||||| | ||||||||| ||||||   ||||||| ||  | |||| || |||||||||||    
T  21068744 acggagggactgatttgattgacattttgtaaattcgaggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaagg 21068645  T
Q  149 acgaatttgaggtatta 165  Q
    |||||||||||||||||    
T  21068644 acgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 17952030 - 17952129
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| |||||||||||  | |||| |||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  17952030 actaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 17952129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 21091144 - 21091109
Alignment:
Q  130 gatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21091144 gatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 7051263 - 7051340
Alignment:
Q  97 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||||||||| ||||||||| |||||| ||  | ||||||| |||||||||   ||||||| ||||||||||| |||||    
T  7051263 gatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtcattttt 7051340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 2968245 - 2968185
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    ||||| |||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  2968245 tttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 2968185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 7e-53; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 3152215 - 3152368
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatg 3152314  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||||| |||||    
T  3152315 aaattggccgatttttcaaaatttaaggataaatttgaggtattagtcgttttt 3152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 44794354 - 44794208
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| |||||||| |||| |||||||||||  |||||| |||| |||| |||||||||||||||||||||||||||| |||||||||||| |    
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatg 44794255  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  44794254 aaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 2660359 - 2660218
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||  || |||| ||| |||| |||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  2660359 acatcatcgttattaacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacg 2660260  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggta 162  Q
    ||||| | ||||||||||||||||||||||||||||||||||    
T  2660259 aaattggtcgatttttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 53190759 - 53190903
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 53190858  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  53190859 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 41977875 - 41977750
Alignment:
Q  43 ttttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 142  Q
    |||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| | || |||||||||| |||||    
T  41977875 ttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaat 41977776  T
Q  143 tcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||    
T  41977775 tcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 46308926 - 46308807
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46308926 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 46308827  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  46308826 acgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 41979352 - 41979442
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 41979442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 38193510 - 38193599
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 53094273 - 53094362
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 27899081 - 27899225
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||| | |||||||||||||||||||||||||| | ||||||||| |||||||| |||||||     
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 27899180  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  27899181 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 54900044 - 54900163
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  54900044 acggagggactgatttgattgacattttgtaaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaagg 54900143  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  54900144 acgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 3150341 - 3150252
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 2226152 - 2226296
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||| ||  |||| ||||||||||    ||||| | |||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 2226251  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  2226252 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 19987591 - 19987695
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19987591 acatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacg 19987690  T
Q  121 aaatt 125  Q
    |||||    
T  19987691 aaatt 19987695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 21348870 - 21348723
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||| ||||| |||||| ||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 21348771  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || |||||||||| ||||||||||||| |||||||||||||||||    
T  21348770 aatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 38192014 - 38191895
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||    
T  38192014 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaagg 38191915  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  38191914 acgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 53187861 - 53187742
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  53187861 acggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaagg 53187762  T
Q  149 acgaatttgaggtattagtc 168  Q
    || |||||||||||||||||    
T  53187761 acaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 44795890 - 44795979
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 46310436 - 46310525
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtc 46310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 54898573 - 54898437
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||  |||| ||||||| |||   ||||| | |||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  54898573 actaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 54898474  T
Q  132 tttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| |||||||||||||||||||||||||||||||    
T  54898473 ttttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 46611273 - 46611392
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||||||||||||||| |||||||||||||||||||  |  ||||||||||||||||||    
T  46611273 acggagggactgatttgattgacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaagg 46611372  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  46611373 acgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 51684757 - 51684610
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||| | |||||||||||| |    
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatg 51684658  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || || ||||||| |||||||||||||||||||||| ||||||||    
T  51684657 aatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 46609238 - 46609149
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 30599915 - 30600063
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||  ||||||| ||||||||||||||||| | ||||||||| |||||||||||||     
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggaca 30600014  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    || || |||||||| | |||||| |||||||||||||||||||||||||    
T  30600015 aatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtcc 30600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 17515457 - 17515310
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| ||||||||  ||||| ||| |||||||   ||||| |||||| ||||||||||||||||||| | ||||||||| ||||||||| || |    
T  17515457 acatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatg 17515358  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || ||| |||||| |||||||||||| ||||||||||||||||||    
T  17515357 aatttggccaatttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 23293167 - 23293314
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||||||||||||  ||||| |||||| ||||||||||| ||||||| | ||||||||| |||||||| || ||    
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcg 23293266  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || || |||||||| ||||||||| || |||||||||||||||||    
T  23293267 aatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 35903914 - 35903819
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtcgttttt 35903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 53092742 - 53092623
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| || |    
T  53092742 acggagggactgatttgattgacattttataaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaag 53092643  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  53092642 acgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 28626500 - 28626411
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  28626500 aaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 43765284 - 43765139
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| || ||||||||   ||||| |||||||||||||||||||  ||||| | ||||||||| ||||||| || |||    
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacg 43765185  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 166  Q
    || ||  ||||||||| |||||||||||||||||||||||||||||    
T  43765184 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 2661908 - 2661992
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtat 163  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 7883417 - 7883328
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 23291689 - 23291570
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||||| |||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  23291689 acggagggactgatttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagg 23291590  T
Q  149 acgaatttgaggtattagtc 168  Q
    |||||||| |||||||||||    
T  23291589 acgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 35905712 - 35905843
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||| ||||  |||| |||||||||||   ||||| | |||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  35905712 tcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 35905811  T
Q  124 tttgccgatttttcaaaattcaaggacgaatt 155  Q
    ||  ||||||||| |||||||||||| |||||    
T  35905812 ttgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 46112606 - 46112487
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||   ||||| |||||||||||||||||| ||||||| | ||||||| | ||||||||   ||||| || |||||||||| |||||||||||    
T  46112606 acggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaagg 46112507  T
Q  149 acgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||    
T  46112506 acgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 611222 - 611311
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||| |||| | | |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  611222 aaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 42279654 - 42279510
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| |||||||||||   |||||  ||||||||||||||||||||||||| | ||||||| | ||||||| | ||||    
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacg 42279555  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || |  || ||||||| ||||||||| ||||||||||||||||||    
T  42279554 aattgagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 2378953 - 2379071
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| ||||||| | | ||||| | |||||||||||||||||||  ||||||||| |||||||||||    
T  2378953 acggagggactgatttgattgacattttgtaaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaagg 2379052  T
Q  149 acgaatttgaggtattagt 167  Q
    |||||||||||||||||||    
T  2379053 acgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 2377173 - 2377032
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  ||||||||||||| ||   ||||| ||||||||||||||||||| |||||| |  || ||| | ||||||||||||||||     
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaat 2377074  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || | | |||||| |||||||||  |||||||||||||||||    
T  2377073 ttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 44268100 - 44267976
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| |||| || | | ||||||| ||||||||| || ||| || |||||||||| |||||||||||    
T  44268100 acggagggactgatttgattgacattttataaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaagg 44268001  T
Q  149 acgaatttgaggtattagtcctttt 173  Q
    |||||||||||||||||||| ||||    
T  44268000 acgaatttgaggtattagtcatttt 44267976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 23774268 - 23774162
Alignment:
Q  52 gagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 151  Q
    ||||||||  ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||| |  | ||||||||||||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacg 23774169  T
Q  152 aatttga 158  Q
    |||||||    
T  23774168 aatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 30598406 - 30598337
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30598406 tatttcgcaaaattcagggac-aaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 42282473 - 42282559
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||||| ||||||| | ||||||||| |||||||||  ||||| ||  | ||||||| ||||||||||||||||||||||||||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 51686413 - 51686483
Alignment:
Q  98 atatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||| |||||| ||||||||| || || ||||||| |||||| ||||||||||||||||||||||||    
T  51686413 atatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 48829437 - 48829355
Alignment:
Q  87 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||| | ||||||||| |||||||||| |  || || || || |||| ||||||||||||||||||||||||||||||||    
T  48829437 ggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtcc 48829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 7884873 - 7884939
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggac 90  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 23888776 - 23888886
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||| ||  |||||||||||||||  |||||||||| | |||| ||||||||| || |||||  | | |||||||| |    
T  23888776 gacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagg 23888875  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  23888876 gacgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 40508915 - 40509025
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||| ||| ||| ||||||||||| | |||| ||||||||| || |||||    | ||||||||||    
T  40508915 gacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaag 40509014  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  40509015 gacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 48633997 - 48633887
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| | ||||||| ||  ||||    | ||||||||||    
T  48633997 gacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattcaag 48633898  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  48633897 gacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 54412547 - 54412633
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||||||||| ||||| | ||||| ||| |||||||| ||||||| ||  || |||||| |||||||| ||||||||||||| |||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 46197867 - 46197766
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||  |||||||||  |||| |||| ||||||   ||| | |||||||||||||||||||| ||||| | ||||||| | ||||||||| ||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacg 46197768  T
Q  121 aa 122  Q
    ||    
T  46197767 aa 46197766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 600805 - 600725
Alignment:
Q  88 gactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||| | ||||||| | |||||||| | || || || | |||||||| |||||||||||| ||||||||||||||||||    
T  600805 gactaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 2977347 - 2977443
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||| |||||| ||  ||||| ||||||| | ||||||||||| | |||| ||||| ||| || |||||||  | |||||||||||||||||||||    
T  2977347 tttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaaggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 25535273 - 25535317
Alignment:
Q  68 ggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 112  Q
    |||||||||| ||||||||||||||| || |||||||||||||||    
T  25535273 ggacgtctgttaaattcagggactaacttaatatttcgaaaaatt 25535317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 17516993 - 17517052
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||||| |||||||| | ||||| ||  ||||||||| |||||||||||||||||||||    
T  17516993 tatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 21350575 - 21350694
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||| |||| || | | ||||||| |||||||||  ||||| || |||||||||  |||| ||| ||    
T  21350575 acggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacgg 21350674  T
Q  149 acgaatttgaggtattagtc 168  Q
    | ||||||||||||||||||    
T  21350675 atgaatttgaggtattagtc 21350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 23876982 - 23877044
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaa 110  Q
    ||||||||||   |||||| |||||| ||| |||||||| ||||||||||||||||| |||||    
T  23876982 gacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatatttcaaaaaa 23877044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 45898352 - 45898462
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   |||||  ||||||||  ||||||| ||||||| ||||||||||| | ||||||||||| || || | |||  | | |||||||| |    
T  45898352 gacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattcagg 45898451  T
Q  148 gacgaatttga 158  Q
    |||||||||||    
T  45898452 gacgaatttga 45898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 46114105 - 46114195
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttc-aaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||  |||||| | ||||||||| |||||||| |||| || || ||||||||||  ||||||||||||  ||||||||||| |||||    
T  46114105 aaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 48830803 - 48830896
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattca 114  Q
    |||||||||| |||||| ||  |||| |||||||||||   ||||| ||||||| ||||||||||  |||||| | |||||||||  |||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattca 48830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 41944666 - 41944586
Alignment:
Q  78 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 158  Q
    ||||||||||||||| ||||||||||||  |||||  |||||||| || ||||||   | |||||||| ||||||| ||||    
T  41944666 aaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattga 41944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 44276193 - 44276265
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaa 93  Q
    |||||||||| |||||| ||  |||| |||||||||||   ||||| || ||||||||||||||| |||||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaa 44276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 6785978 - 6786125
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  6785978 acatcatcactgttaacagacattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacg 6786077  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  6786078 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 37020655 - 37020508
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||     
T  37020655 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggaca 37020556  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||  ||||||||||||||||||||||| | |||||||||||||||    
T  37020555 aaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 24208061 - 24208186
Alignment:
Q  43 ttttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 142  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  143 tcaaggacgaatttgaggtattagtc 168  Q
    |||||||  | |||||||||||||||    
T  24208161 tcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 39664745 - 39664898
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacg 39664844  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    || || |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  39664845 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtcattttt 39664898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 24205687 - 24205593
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  24205687 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcctttt 24205593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 14387438 - 14387349
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 16763212 - 16763076
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||| || ||||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||    
T  16763212 actaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 16763113  T
Q  132 tttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16763112 tttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 40560370 - 40560223
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||| ||  |||| ||||||||||||  ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 40560271  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || || ||||||| ||||||||| ||||||||||| |||||||||    
T  40560270 aatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 16764611 - 16764700
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 19908246 - 19908391
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   |||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||     
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 19908345  T
Q  124 tttgccga-tttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||||| ||||| |||||||||||||||||||||||||||||||    
T  19908346 ttggccgatttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 14389081 - 14389228
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||||||||||| |  |||| |||||||||||   ||||| |||| | || |||||||||||||||| | ||||||||| ||||||||||||||    
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacg 14389180  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || || |||||||||| ||||||||| |||||||||||||||||||||    
T  14389181 aatttggccgatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 37022185 - 37022274
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||    
T  37022185 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 44709744 - 44709889
Alignment:
Q  23 atcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    |||||||| ||||||| |  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | | ||||||| ||||||||||| ||||    
T  44709744 atcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaa 44709843  T
Q  123 atttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
     || |||| ||||| |||||||||||||||||||||||||||||||    
T  44709844 tttggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 2577480 - 2577575
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||| |||||    
T  2577480 aaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtattagtcattttt 2577575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 2767081 - 2766929
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||| |||||||   |||||  ||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 2766982  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 173  Q
    |  ||  ||||||||| |||||||||||||||||||||| |||||||| ||||    
T  2766981 agtttgaccgatttttaaaaattcaaggacgaatttgagctattagtcatttt 2766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 40561878 - 40561967
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 17696353 - 17696209
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||||| |||||||||  |||| ||||||| |||   |||||  ||||| ||||||||||||||||||| | |||||||   |||||||||||| |    
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatg 17696254  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  17696253 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||| | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 42519202 - 42519346
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcg-aaaaattcagggac 119  Q
    |||||||||| |||||||||  |||| || ||||||||   ||||| |||||||||||||||||||||||||| | ||||||| | ||||||||| ||||    
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggac 42519301  T
Q  120 gaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 164  Q
     || ||   | |||||| |||||||||||||||||||||||||||    
T  42519302 taatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 16376825 - 16376736
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| | | ||||||| |||||||||||||||| ||  ||||||||| ||||||||| |||||||||||||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 39663273 - 39663153
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||    
T  39663273 acggagggactgatttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaagg 39663174  T
Q  149 acgaatttgaggtattagtcc 169  Q
    |||||||| ||||||||||||    
T  39663173 acgaattttaggtattagtcc 39663153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 6797606 - 6797506
Alignment:
Q  69 gacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    ||||||||||||||| ||||||||| | ||||||||| |||||||||| ||||| || ||| |||||| |||||||||  | |||||| |||||||||||    
T  6797606 gacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggtattagtc 6797507  T
Q  169 c 169  Q
    |    
T  6797506 c 6797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 19581526 - 19581414
Alignment:
Q  56 gactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatt 155  Q
    ||||||||||| |||| | ||  ||||||  ||||||| | ||||||||| ||||||||||||| || || || ||||||| |||||| |||||||||||    
T  19581526 gactgatttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatt 19581427  T
Q  156 tgaggtattagtc 168  Q
    |||||||||||||    
T  19581426 tgaggtattagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 49 - 165
Target Start/End: Complemental strand, 19906801 - 19906685
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   |||||  |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  19906801 acggagggactgatttgattgacattttgtaaattatgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagg 19906702  T
Q  149 acgaatttgaggtatta 165  Q
    |||||||| ||||||||    
T  19906701 acgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 39455316 - 39455169
Alignment:
Q  21 acatcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 120  Q
    |||||||| | |||||||||  ||||  |||||| |||   ||||| |||||||||||||||||| ||||||| | ||||||| | ||||||||||   |    
T  39455316 acatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactg 39455217  T
Q  121 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    || ||  ||||||||| ||||||||||||| |||||||| ||||||||    
T  39455216 aatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 34400383 - 34400313
Alignment:
Q  99 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 169  Q
    ||||||| |||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  34400383 tatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtcc 34400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 16377197 - 16377292
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 119  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||| ||||||||||| ||||||| | ||||||| | |||||||||||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 39456780 - 39456875
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 174  Q
    ||||||||||||||| | | ||||| | |||||||| ||||||| ||  || |||||| |||||||||||| |||||||| ||||||||| |||||    
T  39456780 aaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtcgttttt 39456875  T

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Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 42517599 - 42517558
Alignment:
Q  127 gccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  42517599 gccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 11023001 - 11023100
Alignment:
Q  32 actaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 131  Q
    |||||||||| |||| ||||||||||| || |||| |||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  11023001 actaacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccga 11023100  T

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Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 6799436 - 6799494
Alignment:
Q  107 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||||||| ||||||| ||  ||||||||| |||||||||||||||||||||| |||||    
T  6799436 aaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

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Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 37417379 - 37417287
Alignment:
Q  62 tttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaat 154  Q
    ||||| |||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||||||||||||    
T  37417379 tttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaat 37417287  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 11315339 - 11315449
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaag 147  Q
    |||||||||||   ||||| |||||||||  ||||||||| |||| ||||||||||||  |||||  || ||||| || |||||||  | |||||| |||    
T  11315339 gacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatttaag 11315438  T
Q  148 gacgaatttga 158  Q
    |||||| ||||    
T  11315439 gacgaagttga 11315449  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 26584821 - 26584895
Alignment:
Q  48 gacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 122  Q
    ||||||||||   |||||| |||||||| | ||||| ||||| ||||||||||||| ||||| || |||||||||    
T  26584821 gacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaa 26584895  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 37645582 - 37645490
Alignment:
Q  73 tctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    |||| |||||||| ||||||| | ||||||||  |||||| | ||||||| |   | ||||||| |||||||||||||||| ||| |||||||    
T  37645582 tctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgatttttaaaaattcaaggacgaagttggggtatta 37645490  T

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Target: scaffold1712 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 1071 - 982
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  1071 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 982  T

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Target: scaffold0081 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 54258 - 54347
Alignment:
Q  79 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  54258 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 54347  T

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Target: scaffold1454 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 1407 - 1266
Alignment:
Q  24 tcatcactactaacggacattttagacggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 123  Q
    ||||||| |||||||||  |||| |||||||||||   ||||| |||||||||||||||||||||||||| | ||||||||  |||||||| |||||||     
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaat 1308  T
Q  124 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 165  Q
    ||  || |||||| |||||||||||||| |||||||||||||    
T  1307 ttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 1525 - 1650
Alignment:
Q  49 acggagggactgatttgacggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 148  Q
    ||||||||||||||||||  ||| | |   ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| |||||||||||    
T  1525 acggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaagg 1624  T
Q  149 acgaatttgaggtattagtccttttt 174  Q
    |||||||||| ||||||||| |||||    
T  1625 acgaatttgatgtattagtctttttt 1650  T

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Target: scaffold0564 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 8353 - 8264
Alignment:
Q  77 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 166  Q
    ||||||||||||||||| | ||||||| | |||||||| | ||||| || ||| |||||| |||||||||||||||||||||||||||||    
T  8353 taaaattcagggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 436336 - 436272
Alignment:
Q  97 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 161  Q
    ||||||||| |||||| | ||| ||| || || ||||||| |||||||||| |||||||||||||    
T  436336 gatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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