View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11627_high_7 (Length: 329)
Name: NF11627_high_7
Description: NF11627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11627_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 322
Target Start/End: Original strand, 8014719 - 8015019
Alignment:
| Q |
18 |
tggacatcatcatagtttaaaaccataattgtattatgttaatgaagaatacaataacatctgtatcctatgactattagttggttgatgataaattgat |
117 |
Q |
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| T |
8014719 |
tggacatcatcatagtttaaaaccataattgtattatgttaatgaagaatacaataacatctgtatcctatgactattagttggttgatgataaattgat |
8014818 |
T |
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| Q |
118 |
tttgatgtgctttatacactactttagatttggtctaaatacttcctttatggactaaatattaaaagtactgaatgtgttttggatttgttgacttcat |
217 |
Q |
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| T |
8014819 |
tttgatgtgctttatacactactttagatttggtctaaatactt----tatggactaaatattaaaagtactgaatgtgttttgcatttgttgacttcat |
8014914 |
T |
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| Q |
218 |
agggcttaaatattgttaaattgggtaattttcaaattttatttttacttgacatttagatcttgtgaagaccatatatcttgggctacaaatatctgaa |
317 |
Q |
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| T |
8014915 |
agggcttaaatattgttaaattgggtaattttcaaattttatttttacttgacatttagatcttgtgaagaccatatatcttgggctgcaaatatctgaa |
8015014 |
T |
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| Q |
318 |
ttggg |
322 |
Q |
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||||| |
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| T |
8015015 |
ttggg |
8015019 |
T |
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