View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11628_low_15 (Length: 256)
Name: NF11628_low_15
Description: NF11628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11628_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 32301515 - 32301267
Alignment:
| Q |
1 |
ttttgtattaaaatgtacttcacttggactaagagtcatgtcaccatcctccaagttactttgtggaaaacgagaacatggaccatgttagattcacaga |
100 |
Q |
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| T |
32301515 |
ttttgtattcaaatgtacttcacttggactaagagtcatgtcaccatcctccaagttactttgtggaaaacgagaacatggaccatgttagattcacaga |
32301416 |
T |
|
| Q |
101 |
cagtgacaaatcttcaaaaaataagatatgcagagattattacagtaaaactatataaatggtcaggggagaaaacatgtgatgagtccagaaaaacata |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32301415 |
cagtgacaaatcttcaaaaaataagatatgcaaagattattacagtaaaactatataaatggtcaggggagaaaacatgtgatgagtccagaaaaacata |
32301316 |
T |
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| Q |
201 |
ctgtttattttttcttcttgaaattgccaaataactgtgcttcttctca |
249 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32301315 |
ctgtttattttttcttcttgaaatcgccaaataactgtgcttcttctca |
32301267 |
T |
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