View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11629_high_13 (Length: 286)

Name: NF11629_high_13
Description: NF11629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11629_high_13
NF11629_high_13
[»] chr1 (36 HSPs)
chr1 (20-226)||(26630340-26630546)
chr1 (45-132)||(7218086-7218173)
chr1 (44-146)||(4200186-4200288)
chr1 (44-150)||(9656603-9656709)
chr1 (59-151)||(27738206-27738298)
chr1 (59-127)||(35677453-35677521)
chr1 (47-127)||(44115919-44115999)
chr1 (82-150)||(49517023-49517091)
chr1 (99-146)||(7274005-7274052)
chr1 (73-132)||(25005837-25005896)
chr1 (77-148)||(34179916-34179987)
chr1 (44-150)||(4622046-4622152)
chr1 (44-150)||(44032010-44032116)
chr1 (81-150)||(1255479-1255548)
chr1 (98-150)||(36151570-36151622)
chr1 (99-150)||(15360847-15360898)
chr1 (99-150)||(15799657-15799708)
chr1 (73-132)||(17269221-17269280)
chr1 (73-132)||(25006074-25006133)
chr1 (75-149)||(6265048-6265122)
chr1 (56-146)||(6932984-6933074)
chr1 (44-150)||(31517751-31517857)
chr1 (49-127)||(33723398-33723476)
chr1 (77-146)||(4363676-4363745)
chr1 (73-150)||(5756726-5756803)
chr1 (109-150)||(14737781-14737822)
chr1 (80-132)||(23544686-23544739)
chr1 (49-150)||(25479534-25479635)
chr1 (109-150)||(26293182-26293223)
chr1 (105-150)||(35080142-35080187)
chr1 (59-124)||(44422678-44422743)
chr1 (81-150)||(48830124-48830193)
chr1 (60-144)||(49365788-49365870)
chr1 (59-150)||(30259512-30259604)
chr1 (49-150)||(38867847-38867950)
chr1 (86-146)||(40304107-40304167)
[»] chr7 (32 HSPs)
chr7 (44-150)||(28165044-28165150)
chr7 (44-123)||(38010694-38010773)
chr7 (74-149)||(46825052-46825127)
chr7 (44-150)||(40688997-40689103)
chr7 (73-146)||(28340884-28340957)
chr7 (58-150)||(30456475-30456567)
chr7 (73-147)||(5006549-5006623)
chr7 (59-132)||(44821930-44822003)
chr7 (99-150)||(35536060-35536111)
chr7 (103-150)||(39591537-39591584)
chr7 (48-150)||(12110313-12110415)
chr7 (44-150)||(48157131-48157237)
chr7 (81-150)||(992023-992092)
chr7 (73-150)||(21453247-21453324)
chr7 (59-132)||(29363489-29363562)
chr7 (59-139)||(6263389-6263469)
chr7 (58-146)||(22759143-22759231)
chr7 (99-150)||(49060493-49060544)
chr7 (48-150)||(27481309-27481411)
chr7 (59-141)||(27548225-27548307)
chr7 (105-146)||(1417221-1417262)
chr7 (59-132)||(3468585-3468658)
chr7 (44-117)||(4966142-4966215)
chr7 (73-122)||(18350747-18350796)
chr7 (99-148)||(23918912-23918961)
chr7 (44-89)||(39280983-39281028)
chr7 (44-121)||(40439036-40439113)
chr7 (44-132)||(22283755-22283843)
chr7 (106-150)||(30496657-30496701)
chr7 (54-122)||(30812129-30812197)
chr7 (102-150)||(45593788-45593836)
chr7 (59-127)||(47177612-47177680)
[»] chr8 (27 HSPs)
chr8 (59-150)||(13652168-13652259)
chr8 (59-150)||(13710811-13710902)
chr8 (44-150)||(4558751-4558857)
chr8 (44-150)||(12361145-12361251)
chr8 (48-153)||(11795042-11795147)
chr8 (44-132)||(43569131-43569219)
chr8 (99-150)||(13561378-13561429)
chr8 (59-146)||(30013175-30013262)
chr8 (49-144)||(38036128-38036223)
chr8 (44-126)||(38874623-38874705)
chr8 (59-132)||(6509329-6509402)
chr8 (49-150)||(11188171-11188272)
chr8 (73-150)||(31884547-31884624)
chr8 (59-151)||(34551072-34551164)
chr8 (81-150)||(35016536-35016606)
chr8 (44-95)||(43504759-43504810)
chr8 (61-127)||(9836882-9836948)
chr8 (44-89)||(2458577-2458622)
chr8 (105-150)||(25867039-25867084)
chr8 (100-137)||(32157074-32157111)
chr8 (73-142)||(34770853-34770922)
chr8 (80-132)||(787153-787205)
chr8 (44-100)||(20672753-20672809)
chr8 (64-148)||(31915300-31915384)
chr8 (74-150)||(34080307-34080383)
chr8 (106-150)||(37220269-37220313)
chr8 (99-151)||(42237488-42237540)
[»] chr5 (29 HSPs)
chr5 (39-150)||(28586772-28586883)
chr5 (44-150)||(39105417-39105523)
chr5 (44-150)||(14295459-14295565)
chr5 (59-132)||(41957477-41957550)
chr5 (59-150)||(32172606-32172697)
chr5 (82-127)||(40159795-40159840)
chr5 (63-147)||(12975303-12975387)
chr5 (62-150)||(18875314-18875402)
chr5 (44-150)||(37588371-37588477)
chr5 (59-132)||(35553214-35553287)
chr5 (71-127)||(7319382-7319438)
chr5 (59-123)||(32408618-32408682)
chr5 (80-148)||(39141923-39141991)
chr5 (73-132)||(3951586-3951645)
chr5 (99-146)||(4855655-4855702)
chr5 (49-124)||(16328845-16328919)
chr5 (44-150)||(9202759-9202865)
chr5 (44-150)||(37526210-37526316)
chr5 (85-150)||(6582884-6582949)
chr5 (59-132)||(12425542-12425615)
chr5 (80-149)||(26516354-26516423)
chr5 (44-89)||(30217096-30217141)
chr5 (46-127)||(38036072-38036153)
chr5 (85-150)||(42569032-42569097)
chr5 (99-147)||(2933717-2933765)
chr5 (110-150)||(10303754-10303794)
chr5 (106-150)||(12595813-12595857)
chr5 (64-144)||(38047886-38047966)
chr5 (66-150)||(42583102-42583186)
[»] chr2 (29 HSPs)
chr2 (42-150)||(42817385-42817493)
chr2 (44-143)||(11513858-11513957)
chr2 (44-123)||(22681196-22681275)
chr2 (99-208)||(37053490-37053598)
chr2 (44-150)||(25790079-25790185)
chr2 (71-140)||(18066091-18066160)
chr2 (58-146)||(18962063-18962151)
chr2 (99-150)||(3673760-3673811)
chr2 (51-149)||(15377719-15377817)
chr2 (71-136)||(1625867-1625932)
chr2 (73-146)||(28933781-28933854)
chr2 (98-143)||(41851968-41852013)
chr2 (74-150)||(17952742-17952818)
chr2 (98-150)||(33192146-33192198)
chr2 (60-127)||(8017410-8017477)
chr2 (44-127)||(43141847-43141930)
chr2 (59-149)||(33256694-33256784)
chr2 (73-127)||(37276722-37276776)
chr2 (44-121)||(3078651-3078728)
chr2 (73-150)||(10143125-10143202)
chr2 (109-150)||(29633025-29633066)
chr2 (110-155)||(37518901-37518946)
chr2 (47-132)||(43173193-43173278)
chr2 (80-152)||(6988066-6988138)
chr2 (98-150)||(11344349-11344401)
chr2 (44-132)||(15866679-15866767)
chr2 (44-132)||(28039343-28039431)
chr2 (44-116)||(39983329-39983401)
chr2 (59-123)||(43205289-43205353)
[»] chr6 (28 HSPs)
chr6 (44-150)||(24782012-24782118)
chr6 (60-150)||(33787772-33787862)
chr6 (44-147)||(281859-281962)
chr6 (85-150)||(29274281-29274346)
chr6 (45-121)||(8364988-8365064)
chr6 (49-120)||(28088238-28088309)
chr6 (73-150)||(1402949-1403026)
chr6 (44-216)||(8010246-8010416)
chr6 (59-150)||(24836228-24836316)
chr6 (79-150)||(4006667-4006738)
chr6 (99-150)||(6310290-6310341)
chr6 (73-124)||(22691560-22691611)
chr6 (75-146)||(22742323-22742394)
chr6 (71-150)||(24476555-24476634)
chr6 (47-113)||(3168275-3168341)
chr6 (48-150)||(9093571-9093673)
chr6 (80-150)||(25099996-25100066)
chr6 (44-113)||(6014525-6014594)
chr6 (99-148)||(10150318-10150367)
chr6 (73-146)||(14492259-14492332)
chr6 (59-132)||(25426141-25426214)
chr6 (44-153)||(30784507-30784615)
chr6 (109-150)||(31583654-31583695)
chr6 (40-89)||(32577993-32578042)
chr6 (75-132)||(33828617-33828674)
chr6 (59-150)||(6647342-6647431)
chr6 (105-145)||(7713983-7714023)
chr6 (105-153)||(29940746-29940794)
[»] chr3 (24 HSPs)
chr3 (44-140)||(41452486-41452582)
chr3 (66-132)||(1217833-1217899)
chr3 (48-150)||(24887298-24887400)
chr3 (44-150)||(38462234-38462340)
chr3 (99-150)||(43079695-43079746)
chr3 (44-150)||(36646393-36646499)
chr3 (44-150)||(45432950-45433056)
chr3 (59-127)||(37273107-37273178)
chr3 (86-150)||(1395624-1395688)
chr3 (44-148)||(28306113-28306217)
chr3 (45-132)||(21367638-21367725)
chr3 (80-150)||(3365358-3365428)
chr3 (80-150)||(29600772-29600842)
chr3 (80-150)||(52618956-52619026)
chr3 (105-150)||(10101548-10101593)
chr3 (105-150)||(10212473-10212518)
chr3 (103-144)||(33307650-33307691)
chr3 (105-150)||(49586988-49587033)
chr3 (101-150)||(51278225-51278274)
chr3 (106-150)||(15304420-15304464)
chr3 (59-111)||(24158529-24158581)
chr3 (66-150)||(33405200-33405284)
chr3 (59-127)||(48286836-48286904)
chr3 (51-95)||(49465683-49465727)
[»] chr4 (32 HSPs)
chr4 (44-150)||(54325048-54325154)
chr4 (73-146)||(10192241-10192314)
chr4 (49-126)||(18628559-18628636)
chr4 (77-149)||(3175905-3175977)
chr4 (44-135)||(7694021-7694112)
chr4 (71-130)||(20907320-20907379)
chr4 (52-150)||(19154699-19154797)
chr4 (81-150)||(4071835-4071904)
chr4 (85-150)||(8130127-8130192)
chr4 (75-132)||(24091434-24091491)
chr4 (44-149)||(30207582-30207686)
chr4 (83-132)||(31038917-31038966)
chr4 (84-152)||(53626727-53626795)
chr4 (59-126)||(2996550-2996617)
chr4 (64-115)||(8147880-8147931)
chr4 (99-150)||(21952914-21952965)
chr4 (49-132)||(26883966-26884049)
chr4 (99-150)||(30024653-30024704)
chr4 (44-150)||(30338602-30338709)
chr4 (51-118)||(36722687-36722754)
chr4 (99-150)||(49219092-49219143)
chr4 (44-150)||(6364102-6364208)
chr4 (45-127)||(21157744-21157826)
chr4 (76-150)||(26520272-26520346)
chr4 (46-150)||(49803164-49803265)
chr4 (44-121)||(17975380-17975457)
chr4 (44-89)||(19429723-19429768)
chr4 (44-101)||(21043246-21043303)
chr4 (59-132)||(23819060-23819133)
chr4 (61-150)||(44319903-44319991)
chr4 (44-124)||(43824262-43824342)
chr4 (46-150)||(45128323-45128427)
[»] scaffold0508 (1 HSPs)
scaffold0508 (100-150)||(9842-9892)
[»] scaffold0654 (1 HSPs)
scaffold0654 (59-150)||(6663-6754)
[»] scaffold0014 (1 HSPs)
scaffold0014 (59-150)||(116582-116673)
[»] scaffold0024 (1 HSPs)
scaffold0024 (106-150)||(27529-27573)


Alignment Details
Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 26630546 - 26630340
Alignment:
Q  20 gagagcttaaagaaccaacatccttaagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaa 119  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  26630546 gagagcttaaagaatcaacatcctaaagcttttttaagtttatttccatatgttctccaggatagcgtatcaaaacagtttatagcttatatgaaaacaa 26630447  T
Q  120 tttgacttcatttcattttttgttatagaaaaagatgtttacttaagaacctatatgatacgcgcttaattaaactgtttatacaaacatgaccttagtc 219  Q
    ||| |||| |||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26630446 ttttactttatttcattttttgttatagaaatagatgtttacttaagaagttatatgataagcgcttaattaaactgtttatacaaacatgaccttagtc 26630347  T
Q  220 tttccat 226  Q
     ||||||    
T  26630346 cttccat 26630340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 7218086 - 7218173
Alignment:
Q  45 aagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||||||| |  |||||| |||| |||||||||||||| |||| |||||   ||||| ||||||||||||||||||||||| ||||    
T  7218086 aagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattt 7218173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 4200288 - 4200186
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||||||||||||| |||||| |||| |  |||||||||| ||||  |||||  | |||| ||||||||||||||| ||||||| |||| || |||||||    
T  4200288 taagctgttttaagcttattttcataagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatcttttgtt 4200189  T
Q  144 ata 146  Q
    |||    
T  4200188 ata 4200186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 9656709 - 9656603
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || |||||| ||||  |  ||||||||||||||| || || | ||||| |||||||||||| ||||| |||| |||| |||||||| |    
T  9656709 taagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttattttttgct 9656610  T
Q  144 atagaaa 150  Q
    |||||||    
T  9656609 atagaaa 9656603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 27738206 - 27738298
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaaa 151  Q
    |||| |||||| | ||||| | ||||||||| |||||   ||||| ||||||||||||||||||||||| |||| || ||||||| |||||||    
T  27738206 ttatatccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgttgtagaaaa 27738298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 35677521 - 35677453
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    ||||||||||| ||||| ||||||||||| | ||||| |||||||| |||||| | |||||||||||||    
T  35677521 ttatttccataagttcttcaggatagcttgtgaaaacagtttataagttatataataacaatttgactt 35677453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 44115919 - 44115999
Alignment:
Q  47 gctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||||||| ||||||||  |||| | |||||| || ||||||| ||||| |||||||  ||||||||||||||||||||||    
T  44115919 gctgttttcagtttattctcatacgctctccaagacagcttataaaaacagtttatatgttatatgaaaacaatttgactt 44115999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 49517091 - 49517023
Alignment:
Q  82 tagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| ||||| | ||||| |||| |||||||||||||||||| |||| || ||||||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaa 49517023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 7274005 - 7274052
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  7274005 ttataacttgtatgaaaacaatttgactttatttcatcttttgttata 7274052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 25005837 - 25005896
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||||||||| |||||   ||||| ||||||||||||||| ||||||||||||    
T  25005837 tctccaggatagcttatgaaaacaacttatagcttatatgaaaacaagttgacttcattt 25005896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 34179916 - 34179987
Alignment:
Q  77 caggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    |||||||| |||| ||||| ||||||| |||| || ||||||||||||||| |||| || ||||||||||||    
T  34179916 caggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgttataga 34179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 4622152 - 4622046
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || |||||| || | | |||||| |||||| |||  |||| | ||||| |||||||||||| | ||||| ||||||| || |||||||    
T  4622152 taagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaagagtttgaattcatttgatcttttgtt 4622053  T
Q  144 atagaaa 150  Q
    |||||||    
T  4622052 atagaaa 4622046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 44032010 - 44032116
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||||| |||| || | ||||||||| | ||| || |||| ||||  ||||  ||||||| ||||||||||||||||||||||| |||| |  |||||||    
T  44032010 taagctattttcagctaatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttattttagcttttgtt 44032109  T
Q  144 atagaaa 150  Q
    |||||||    
T  44032110 atagaaa 44032116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 1255479 - 1255548
Alignment:
Q  81 atagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| || ||||| | ||||||||| |||||||| |||||||||||||||||| ||||  ||||||||    
T  1255479 atagctaatgaaaacagcttataacttgtatgaaaagaatttgacttcatttcatcttttactatagaaa 1255548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 36151570 - 36151622
Alignment:
Q  98 tttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||| |||||||||||||||| |||| || ||||||||| ||||    
T  36151570 tttataacttatacgaaaacaatttgactttattttatcttttgttattgaaa 36151622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 15360898 - 15360847
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| |||||||||||||| |||||||| |||| || ||||||||||||||    
T  15360898 ttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaa 15360847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 15799708 - 15799657
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| |||||||||||||| |||||||| ||||| |||||||||| |||||    
T  15799708 ttatagcttatatgaaaacagtttgactttatttctttttttgttaaagaaa 15799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 17269280 - 17269221
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||||||||| |||||   ||||  ||||||||||||||||||||||| ||||    
T  17269280 tctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattt 17269221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 25006074 - 25006133
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||| |||||||||| |||||   ||||| ||||||||||||||||||||||| ||||    
T  25006074 tctccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattt 25006133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 6265122 - 6265048
Alignment:
Q  75 tccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaa 149  Q
    |||| |||| ||||| ||||||| |||||  | || | ||||||||||||||| |||| ||||||||||||||||    
T  6265122 tccatgataacttatgaaaacggcttatagttaatgtaaaaacaatttgactttattttattttttgttatagaa 6265048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 6932984 - 6933074
Alignment:
Q  56 agtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||||||||||||| | ||| ||||| | ||||| ||||    | ||||||| ||||||||||||||||||| |||| || ||||||||||    
T  6932984 agtttatttccataagctcttcaggacaacttatgaaaagaactaataacttctatgaaaacaatttgactttattttatgttttgttata 6933074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 31517751 - 31517857
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || |||||| |||| | |||||| || || |||| || || | ||||| ||||||||||| |||||| |||| |||| || |||||||    
T  31517751 taagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgtt 31517850  T
Q  144 atagaaa 150  Q
     ||||||    
T  31517851 gtagaaa 31517857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 33723398 - 33723476
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||||| || ||||||||||| | | | |||| |||||||| ||||| ||| |||  ||||||||||||||||||||||    
T  33723398 tgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttatatgaaaacaatttgactt 33723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 4363676 - 4363745
Alignment:
Q  77 caggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||||||| ||||  | ||||| |||||||||||||| |||||| | |||| || ||||||||||    
T  4363676 caggatagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatcttttgttata 4363745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 5756726 - 5756803
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| |||||||  |||||   |||||| ||||||||||||| ||| |||| || |||| ||||||||||||||    
T  5756726 tctccaggctagcttacgaaaacaacttataatttatatgaaaacagtttaactttatatcatcttttgttatagaaa 5756803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 14737781 - 14737822
Alignment:
Q  109 tatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||| |||| || ||||||||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaa 14737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 23544686 - 23544739
Alignment:
Q  80 gatagcttatcaaaacggttta-taacttatatgaaaacaatttgacttcattt 132  Q
    |||||||||| ||||| ||||| || ||||||||||||||||||||||| ||||    
T  23544686 gatagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattt 23544739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 25479635 - 25479534
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    |||||| || |||||| |||| | |||| |||||||||||| |||||   ||||| | |||||||| |||||||||| | |||| || ||| ||||||||    
T  25479635 tgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatctttggttataga 25479536  T
Q  149 aa 150  Q
    ||    
T  25479535 aa 25479534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 26293182 - 26293223
Alignment:
Q  109 tatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||| |||| | |||||||||||||||    
T  26293182 tatgaaaacaatttgactttattttactttttgttatagaaa 26293223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 35080142 - 35080187
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| ||||| |||||||| |||| |||||||||||||||||    
T  35080142 cttatatggaaacagtttgactttattttattttttgttatagaaa 35080187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 44422743 - 44422678
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttga 124  Q
    |||||| |||| | ||||||||||||||||| ||||  | ||||| |||||||||||||| |||||    
T  44422743 ttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttga 44422678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 48830124 - 48830193
Alignment:
Q  81 atagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||| ||||| ||||||| |||||||||||| | |||||||| |||| || ||| || |||||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaa 48830193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 49365788 - 49365870
Alignment:
Q  60 tatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtta 144  Q
    |||||||||| | ||| || ||||||||||  |||| ||||||| ||| ||||||||||||||||||  |||| || ||||||||    
T  49365788 tatttccataagctcttcaagatagcttat--aaacagtttatagcttgtatgaaaacaatttgactctattttatcttttgtta 49365870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 30259512 - 30259604
Alignment:
Q  59 ttatttccatatgttctccaggatagctt-atcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| | |||||| |||||||| ||  |||| | ||||| ||||||| ||| || |||||||| |||| || ||||||||||||||    
T  30259512 ttatttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttgttatagaaa 30259604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 38867847 - 38867950
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttata--tgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||||| || |||||| |||| ||||| || |||| ||||| ||||| ||||| | ||||||  |||||||| |||||||| |||| || ||||| ||||    
T  38867847 tgtttttagcttattttcataagttcttcaagataacttatgaaaacagtttaaagcttatatatgaaaacattttgactttatttaatcttttggtata 38867946  T
Q  147 gaaa 150  Q
    ||||    
T  38867947 gaaa 38867950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 40304107 - 40304167
Alignment:
Q  86 ttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||| ||||| | |||||||||||||||||||||| ||| || |||| || ||||||||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttata 40304167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 28165150 - 28165044
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| |  ||||||||||| | |||||| |||||||||| || || ||||||| ||||||| |||||||||||||||||||| || |||||||    
T  28165150 taagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgtt 28165051  T
Q  144 atagaaa 150  Q
    |||||||    
T  28165050 atagaaa 28165044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 38010773 - 38010694
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttg 123  Q
    ||||||||||| || ||||||||||| |||||| ||||||| |||| ||||| | ||||| |||||||||||||||||||    
T  38010773 taagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttg 38010694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 46825127 - 46825052
Alignment:
Q  74 ctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaa 149  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||||||||| |||| || |||| ||||||||    
T  46825127 ctccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 40688997 - 40689103
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || |||||| |||| ||| ||||||||||||||| || || | ||||| |||||||||||| ||||| |||| |||| || ||||| |    
T  40688997 taagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttttgct 40689096  T
Q  144 atagaaa 150  Q
    |||||||    
T  40689097 atagaaa 40689103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 28340884 - 28340957
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||| |||||||||||| ||||| | ||||| ||||||||| ||||||||||||||||||||| |||| |||||    
T  28340884 tctctaggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatcttttattata 28340957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 30456475 - 30456567
Alignment:
Q  58 tttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||| |||| | |||||| ||||| |||| |||||   ||||||||||||||||||||||||||||| |||| || ||||||| ||||||    
T  30456475 tttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgttttagaaa 30456567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 5006549 - 5006623
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    |||||||| |||||||| |||||  |||||| |||||||||||||| |||||||| |||| || |||||||||||    
T  5006549 tctccagggtagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgttatag 5006623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 44822003 - 44821930
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||| |||| ||||||||| ||||||||| ||||| | ||||||||||||  ||||||||||||||| ||||    
T  44822003 ttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 35536111 - 35536060
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||||||||||||| |||| || || |||||||||||    
T  35536111 ttataacttatatgaaaacaatttgactttattttatcttatgttatagaaa 35536060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 39591537 - 39591584
Alignment:
Q  103 aacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||    
T  39591537 aacttatatgaaaacaatttgactttattttatcttttgttatagaaa 39591584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 12110415 - 12110313
Alignment:
Q  48 ctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    ||||||| || |||||| |||| ||||| || |||||||||| ||||| | ||||| ||||||  ||||||||||||||| |||| || || ||| ||||    
T  12110415 ctgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatcttgtgtaatag 12110316  T
Q  148 aaa 150  Q
    |||    
T  12110315 aaa 12110313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 48157131 - 48157237
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || ||||||||||| | ||||| | ||||||| | |||||   ||||| ||||||| |||||||||| |||| |||| || |||| ||    
T  48157131 taagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaaattatagcttatattaaaacaatttcactttattttatcttttatt 48157230  T
Q  144 atagaaa 150  Q
    |||||||    
T  48157231 atagaaa 48157237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 992092 - 992023
Alignment:
Q  81 atagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||| ||||  ||||||| |||||||||||| | |||| ||| |||| |||||||||||||||||    
T  992092 atagcttatgaaaaaagtttataccttatatgaaaatattttgtctttattttattttttgttatagaaa 992023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 21453324 - 21453247
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||||| ||||||| || | || |||||||| |||||    
T  21453324 tctctaggatagcttatgaaaacagtttatagcttatatgagaacaacttgactttatcttatcttttgttacagaaa 21453247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 29363562 - 29363489
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||| | ||||||||||| ||||| | ||| | |||||||| ||||||||||| |||||||| ||||    
T  29363562 ttatttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattt 29363489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 6263389 - 6263469
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttt 139  Q
    ||||||||||||| ||||||  ||||||||| ||| | | ||||||||||||||||||| |||| | || |||| ||||||    
T  6263389 ttatttccatatgctctccataatagcttatgaaatcagcttataacttatatgaaaaccattttatttaattttattttt 6263469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 22759231 - 22759143
Alignment:
Q  58 tttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||||||||||| | ||||| ||||||||||| ||| | | || || ||||||||||||||||||  ||| |||| || ||||||||||    
T  22759231 tttatttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttata 22759143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 49060544 - 49060493
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| ||||||| |||| |||||||||| |||| |||||||||||||||||    
T  49060544 ttatagcttatataaaaataatttgactttattttattttttgttatagaaa 49060493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 27481309 - 27481411
Alignment:
Q  48 ctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    |||||||  ||||||||||||| | | |||| |||||||||| ||||    ||||| |||||||| ||||| ||||||||| ||| ||  ||||||||||    
T  27481309 ctgttttgggtttatttccataagctatccatgatagcttatgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttatag 27481408  T
Q  148 aaa 150  Q
    |||    
T  27481409 aaa 27481411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 27548307 - 27548225
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttg 141  Q
    |||| |||||| ||| |||| |||||||||| ||||| | ||||| |||| |||||||||||| ||||| |||| || |||||    
T  27548307 ttatctccataagttatccaagatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttg 27548225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 1417262 - 1417221
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||||||||||||||||| |||| || ||||||||||    
T  1417262 cttatatgaaaacaatttgactttattttatcttttgttata 1417221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 3468658 - 3468585
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||| | |||||| ||||||| |||| ||||  | |||||||||||| ||||| | |||||||||||||    
T  3468658 ttatttccacaagttctctaggatagattatgaaaaaagcttataacttatacgaaaatagtttgacttcattt 3468585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 4966215 - 4966142
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaac 117  Q
    |||| |||||| |||||||||||||| | ||| |||||| |||||| ||||| | ||||| || ||||||||||    
T  4966215 taagttgttttcagtttatttccataagctcttcaggatggcttatgaaaacagcttatacctaatatgaaaac 4966142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 18350747 - 18350796
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaattt 122  Q
    |||||| |||||||||| ||||| | |||||||||||| |||||||||||    
T  18350747 tctccatgatagcttatgaaaacagcttataacttatacgaaaacaattt 18350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 23918961 - 23918912
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    ||||| ||||||||||||||||||||||| |||| || |||||| |||||    
T  23918961 ttatagcttatatgaaaacaatttgactttattttatcttttgtaataga 23918912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 39281028 - 39280983
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttat 89  Q
    |||| |||||| || |||||||||||||||||||| ||||||||||    
T  39281028 taagttgttttcagcttatttccatatgttctccaagatagcttat 39280983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 40439113 - 40439036
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatt 121  Q
    ||||||||||| |  ||||||||||| | ||| |||||||||| || |||||   ||||||| |||||||||||||||    
T  40439113 taagctgtttttaacttatttccataagctcttcaggatagctaatgaaaacaacttataacatatatgaaaacaatt 40439036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 22283755 - 22283843
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||| || ||||||||||| |||||| | ||| | |||| ||||| ||||||| || |||  |||||||||| |||| ||||    
T  22283755 taagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttattt 22283843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 30496701 - 30496657
Alignment:
Q  106 ttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| |||||||||||||||| |||| || ||||||||||||||    
T  30496701 ttatacgaaaacaatttgactttattttatattttgttatagaaa 30496657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 30812197 - 30812129
Alignment:
Q  54 taagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaattt 122  Q
    |||| ||||||||||| | |||||| ||||||| || ||||| | ||||| |||||| |||||||||||    
T  30812197 taagcttatttccataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaacaattt 30812129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 45593788 - 45593836
Alignment:
Q  102 taacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||| |||||||| |||| || |||||||| |||||    
T  45593788 taacttatatgaaaacagtttgactttattttatgttttgttacagaaa 45593836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 47177680 - 47177612
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||||| ||||  ||||||| |||||||| | ||||| | ||||| |||||||||||||||||| ||||    
T  47177680 ttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaactt 47177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 13652259 - 13652168
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| || | ||||||| ||||||||| |||||  ||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||    
T  13652259 ttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaa 13652168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 13710902 - 13710811
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| || | ||||||| ||||||||| |||||  ||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||    
T  13710902 ttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaa 13710811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 4558857 - 4558751
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||| |||||| |||||||||||||| | |||| ||||||||||||  |||| | ||||| | |||||||||| ||||| |||| |||| || |||| ||    
T  4558857 taagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttatt 4558758  T
Q  144 atagaaa 150  Q
    |||||||    
T  4558757 atagaaa 4558751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 12361251 - 12361145
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| |  ||||||||||  | ||||| | ||| ||||| ||||| | ||||| |||||||||||||||||||||||||||| || |||  ||    
T  12361251 taagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatctttattt 12361152  T
Q  144 atagaaa 150  Q
    |||||||    
T  12361151 atagaaa 12361145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 11795147 - 11795042
Alignment:
Q  48 ctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    ||||||| || ||||||||||| | ||||||  ||||||||| ||| | | |||||||||||||||||||| | |||||| |||  || |||||| ||||    
T  11795147 ctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgttttgtcatag 11795048  T
Q  148 aaaaag 153  Q
    ||||||    
T  11795047 aaaaag 11795042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 43569219 - 43569131
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||| |  | ||||||||  |||||||||||||||||||  ||| |||||||| |||||| ||||||| |||||||| ||||    
T  43569219 taagctgttttcaactaatttccattagttctccaggatagcttatggaaatggtttatagcttataggaaaacattttgacttaattt 43569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 13561378 - 13561429
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| |||||||||||||||||||||| |||| ||||| |||||||||||    
T  13561378 ttataatttatatgaaaacaatttgactttatttaattttctgttatagaaa 13561429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 30013262 - 30013175
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||||  ||||| ||||||||||||| ||||| | ||||| |||||||| ||||| |||||||| |||| |  ||||||||||    
T  30013262 ttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgacttaatttgaccttttgttata 30013175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 38036128 - 38036223
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtta 144  Q
    |||||| || ||||||| ||| | |||||| ||||||| |||||||| ||||||| |||| |  |||||||||||| || |||| |||||||||||    
T  38036128 tgttttcagcttatttcaataagctctccaagatagctaatcaaaacagtttatagcttacacaaaaacaatttgaatttattttattttttgtta 38036223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 38874705 - 38874623
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgact 126  Q
    |||||| |||| || |||||| |||||||||||||  ||||||||| ||||| | ||| | |||||||||||| |||||||||    
T  38874705 taagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 38874623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 6509329 - 6509402
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||| ||| | ||||||||||||||||| ||||| | ||||| ||||||| || |||||||||||| ||||    
T  6509329 ttatttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattt 6509402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 11188171 - 11188272
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    |||||| |||||||| |||||   |||| |||||||||||||||||  |||||||||| |||| |||| | ||||  || |||| || ||||||||||||    
T  11188171 tgttttcagtttattaccataaactctctaggatagcttatcaaaatagtttataactaatataaaaatagtttggttttattttatcttttgttataga 11188270  T
Q  149 aa 150  Q
    ||    
T  11188271 aa 11188272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 31884624 - 31884547
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| |||||||||| |||||  |||||| |||||||||||||||||  | || |||| || ||||||||||||||    
T  31884624 tctccatgatagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaa 31884547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 34551164 - 34551072
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaaa 151  Q
    |||||| |||| | ||||||||||| ||||  |||||   |||||||||| |||||||||||||||||| || | || |||||||||| ||||    
T  34551164 ttattttcataagctctccaggataacttaagaaaacaacttataacttaaatgaaaacaatttgacttgatgttatcttttgttatataaaa 34551072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 35016606 - 35016536
Alignment:
Q  81 atagcttatcaaaacggtttataa---cttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||| ||||| ||||||||   |||||||||||||| ||||||||||||| |  ||||||||||||||    
T  35016606 atagcttatgaaaacagtttataataacttatatgaaaacattttgacttcatttaa--ttttgttatagaaa 35016536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 43504810 - 43504759
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaac 95  Q
    ||||||||||| || ||||||||||| |||||||| |||||||||| |||||    
T  43504810 taagctgttttcagcttatttccataagttctccaagatagcttataaaaac 43504759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 9836882 - 9836948
Alignment:
Q  61 atttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    ||||||||| | |||||| |||||||||| ||||| | || ||||||||||||||| | ||||||||    
T  9836882 atttccataagctctccaagatagcttatgaaaacaggttgtaacttatatgaaaatagtttgactt 9836948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 2458577 - 2458622
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttat 89  Q
    ||||||||||| |||||||||||||| | |||| ||||||||||||    
T  2458577 taagctgttttcagtttatttccataagctctctaggatagcttat 2458622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 25867084 - 25867039
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||| | |||||||| ||||||| ||||||||||||||    
T  25867084 cttatatgaaaatattttgactttatttcatcttttgttatagaaa 25867039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 32157074 - 32157111
Alignment:
Q  100 tataacttatatgaaaacaatttgacttcatttcattt 137  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  32157074 tataacctatatgaaaacaatttgacttcatttaattt 32157111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 34770922 - 34770853
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgt 142  Q
    |||| |||||||||||| |||||   ||||| |||| |||||||||||||||||| |||| || ||||||    
T  34770922 tctctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgt 34770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 787153 - 787205
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||| ||||| ||||| ||||||| ||||||||| ||||||||||||| ||||    
T  787153 gataacttatgaaaacagtttatagcttatatgataacaatttgactttattt 787205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 20672809 - 20672753
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggttt 100  Q
    ||||||||||| || |||||| |||| | ||||||||||||||||| ||||| ||||    
T  20672809 taagctgttttcagcttattttcataagctctccaggatagcttataaaaacagttt 20672753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 31915300 - 31915384
Alignment:
Q  64 tccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    |||||| | ||||||||||||||||  || ||   ||||| ||| ||||||||||||||||||| |||  || ||||||||||||    
T  31915300 tccataagctctccaggatagcttacaaagacatcttataccttgtatgaaaacaatttgactttattctatcttttgttataga 31915384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 34080307 - 34080383
Alignment:
Q  74 ctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||| ||| ||||| | ||||| |||||| |  |||| ||||||||||||| || |||||||| |||||    
T  34080307 ctccaggatagcgtatgaaaacagcttatagcttatacggtaacagtttgacttcattttatcttttgttaaagaaa 34080383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 37220313 - 37220269
Alignment:
Q  106 ttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||| |||| |||| || ||||||||||||||||||||||    
T  37220313 ttatatgaacacaacttgagttaatttcattttttgttatagaaa 37220269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 42237488 - 42237540
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaaa 151  Q
    ||||| |||||||||||||||||| |||| |||| || |||||||||| ||||    
T  42237488 ttatagcttatatgaaaacaatttaactttattttatcttttgttataaaaaa 42237540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 28586772 - 28586883
Alignment:
Q  39 atccttaagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcatttt 138  Q
    |||| ||||||||||| || ||||||| ||| | |||| |||||||||  ||||||| | |||||| ||||||||||||| |||||||| |||| || ||    
T  28586772 atccgtaagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactttattttatctt 28586871  T
Q  139 ttgttatagaaa 150  Q
    ||||||||||||    
T  28586872 ttgttatagaaa 28586883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 39105523 - 39105417
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||||| |||| || |||||| |||| |||||||| |||||||||| ||||| | ||||| |||||| ||||||||||| |||||||||||| ||| | |    
T  39105523 taagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagct 39105424  T
Q  144 atagaaa 150  Q
    |||||||    
T  39105423 atagaaa 39105417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 14295565 - 14295459
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || ||| ||| | | | ||||||||||||||||  ||||| | ||||| |||||||||||||| |||||||| |||| || |||||||    
T  14295565 taagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgtt 14295466  T
Q  144 atagaaa 150  Q
    |||||||    
T  14295465 atagaaa 14295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 41957477 - 41957550
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||| |||| |||||| |||||||||||| ||||| | |||||||||| ||||||||||||| |||||||||    
T  41957477 ttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcattt 41957550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 32172697 - 32172606
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||  ||||| || |||||||||| ||||| | ||||| |||||||| |||||| |||||||||||| || ||||||| ||||||    
T  32172697 ttatttccattagttcttcatgatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaa 32172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 40159840 - 40159795
Alignment:
Q  82 tagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  40159840 tagcttatgaaaacgatttataacttatatgaaaacaatttgactt 40159795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 12975387 - 12975303
Alignment:
Q  63 ttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    ||||||| | |||||| |||||||||| || || | ||||| |||||||||||||||||||| || |||| ||| ||||||||||    
T  12975387 ttccataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttattctttgttatag 12975303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 18875402 - 18875314
Alignment:
Q  62 tttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| | ||||||||||| ||||| ||||| | ||||||||| ||||||| ||||||||||| ||||  | ||||| ||||||||    
T  18875402 tttccataagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgactttattttgtcttttgatatagaaa 18875314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 37588371 - 37588477
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || ||||||||||| | ||||||| ||| ||||| |||||   ||||| |||||||||||||  ||||| || |||| || |||| ||    
T  37588371 taagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttatt 37588470  T
Q  144 atagaaa 150  Q
    |||||||    
T  37588471 atagaaa 37588477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 35553214 - 35553287
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||| | ||||||| ||||| ||| ||||  ||||||| |||||||||||| |||||||||| ||||    
T  35553214 ttatttccataagctctccagaatagcgtatgaaaatagtttatagcttatatgaaaagaatttgacttaattt 35553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 7319438 - 7319382
Alignment:
Q  71 gttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||||||| |||||||||  ||||| ||||||| |||||||||||||||||| ||||    
T  7319438 gttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactt 7319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 32408618 - 32408682
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttg 123  Q
    ||||||||||| | ||| ||||||||||||| ||||  ||||||| |||||||||||| ||||||    
T  32408618 ttatttccataagctcttcaggatagcttatgaaaatagtttatagcttatatgaaaataatttg 32408682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 39141991 - 39141923
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    |||||||||| ||||| ||||||| |||||||||||  |||||||||  |||| || ||||||||||||    
T  39141991 gatagcttatgaaaactgtttatagcttatatgaaattaatttgactatattttatgttttgttataga 39141923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 3951645 - 3951586
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||||||||| ||||| | ||||| || ||||||||| ||||||| |||||||    
T  3951645 tctccaggatagcttataaaaacagcttatagctaatatgaaaataatttgatttcattt 3951586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 4855702 - 4855655
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||||||||| |||||||| |||| |||| |||||||||||||    
T  4855702 ttataacttatatgataacaatttaactttattttattttttgttata 4855655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 16328919 - 16328845
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttga 124  Q
    |||||| || ||||||||||| | |||||||| |||||||  ||||| |||||||| ||||||||||||| |||||    
T  16328919 tgttttcagcttatttccataagctctccagg-tagcttacgaaaacagtttataatttatatgaaaacagtttga 16328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 9202759 - 9202865
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||  || |||||| |||| ||||| || |||| ||||| ||||| | ||||  |||||||||||||||||| |||| |||| || ||||| |    
T  9202759 taagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgct 9202858  T
Q  144 atagaaa 150  Q
    | |||||    
T  9202859 acagaaa 9202865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 37526210 - 37526316
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || ||||||||||| | ||||||| | | ||||| |||||   ||||| |||||||||||||  ||||| || |||| || |||| ||    
T  37526210 taagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttatt 37526309  T
Q  144 atagaaa 150  Q
    |||||||    
T  37526310 atagaaa 37526316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 6582884 - 6582949
Alignment:
Q  85 cttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| ||||| |||||||||||||| ||||| ||||| ||||||||| |  ||||||| ||||||    
T  6582884 cttatgaaaacagtttataacttataagaaaaaaatttaacttcattttagcttttgttgtagaaa 6582949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 12425615 - 12425542
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||| |||| |||||||| |||||||| | ||||| | ||||| |||||| ||||||||||| |||| ||||    
T  12425615 ttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattt 12425542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 26516423 - 26516354
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaa 149  Q
    |||||||||| ||||| |||||||||||||||||||  | |||||||| |||| || | |||||| ||||    
T  26516423 gatagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatctattgttagagaa 26516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 30217141 - 30217096
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttat 89  Q
    |||| ||||||| ||||||||||||| | |||||||||||||||||    
T  30217141 taagttgttttaggtttatttccataagctctccaggatagcttat 30217096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 38036072 - 38036153
Alignment:
Q  46 agctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    ||||||||| | |||||||| |||||||||||| ||||| |||  ||||| ||| |||  |||||| |||||| ||||||||    
T  38036072 agctgttttcaatttatttctatatgttctccaagataggttaagaaaacagttcatagtttatataaaaacagtttgactt 38036153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 42569032 - 42569097
Alignment:
Q  85 cttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| | ||||| |||||| |||||||||| ||||| |||| || ||||| ||||||||    
T  42569032 cttatcaaaacagattatagcttatacgaaaacaattagactttattttatcttttgctatagaaa 42569097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 2933717 - 2933765
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    |||||||||||||||||||| ||| ||||||||| || |||| ||||||    
T  2933717 ttataacttatatgaaaacagtttaacttcattttatcttttattatag 2933765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 10303794 - 10303754
Alignment:
Q  110 atgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||||| |||| || ||||||||||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaa 10303754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 12595813 - 12595857
Alignment:
Q  106 ttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||    
T  12595813 ttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 38047886 - 38047966
Alignment:
Q  64 tccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtta 144  Q
    |||||| | ||||||||||||||||| ||||| |  ||||   |||||||||| |||||||||| |||| || ||||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgtta 38047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 42583186 - 42583102
Alignment:
Q  66 catatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||| |||||||| ||||  |||| ||||| | ||||  |||| | ||||||||||| |||| ||||||| ||||||||||||||    
T  42583186 cataagttctccacgataaattatgaaaacagcttatcccttacacgaaaacaatttaactttatttcatcttttgttatagaaa 42583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 42817385 - 42817493
Alignment:
Q  42 cttaagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttg 141  Q
    |||||| |||||| || ||| ||||||| | ||| ||| ||||||||| ||||| |||||| |||||||||||||||  |||||||||||| || |||||    
T  42817385 cttaagttgtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatcttttg 42817484  T
Q  142 ttatagaaa 150  Q
     ||||||||    
T  42817485 gtatagaaa 42817493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 11513957 - 11513858
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||||| |||| || ||||||||| | |||||||| |||||||||| |||||   ||||| ||||||||||||||||||||||| |||| || |||||||    
T  11513957 taagctattttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 22681196 - 22681275
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttg 123  Q
    ||||||||||| || ||||||||||| |||||| ||||||| |||| ||||| | ||||| |||||||||||||||||||    
T  22681196 taagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttg 22681275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 37053598 - 37053490
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaaaagatgtttacttaagaacctatatgatacgcgcttaattaaactgtt 198  Q
    |||||||||||||||||||| |||||||| |||| ||||| ||||||||||| || | | ||| |||| || ||||||||| | ||||||| ||||||||    
T  37053598 ttataacttatatgaaaacagtttgactttattttattttctgttatagaaatag-tctatacataagcacttatatgataagtgcttaataaaactgtt 37053500  T
Q  199 tatacaaaca 208  Q
     || ||||||    
T  37053499 aatccaaaca 37053490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 25790185 - 25790079
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| |  |||||| |||| | |||||||||||| ||||| ||||  ||| || |||||||||||||| |||||||||| || || |||| ||    
T  25790185 taagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagtttgacttcactttatcttttttt 25790086  T
Q  144 atagaaa 150  Q
    |||||||    
T  25790085 atagaaa 25790079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 18066160 - 18066091
Alignment:
Q  71 gttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcatttttt 140  Q
    |||||||| |||||||||| ||||| | ||||| |||||||||||||||||| |||| ||||||| ||||    
T  18066160 gttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttatttcatatttt 18066091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 18962063 - 18962151
Alignment:
Q  58 tttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||||||   |||||| |||||||||| ||||  ||||||| |||||||||||||| ||| |||| |||| || ||||||||||    
T  18962063 tttatttccatagtctctccatgatagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatcttttgttata 18962151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 3673811 - 3673760
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||||||||||| |||| |||| || ||||||||||||||    
T  3673811 ttataacttatatgaaaacaatttaactttattttatattttgttatagaaa 3673760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 15377817 - 15377719
Alignment:
Q  51 ttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaa 149  Q
    |||||||||||||| |||| | ||  ||| ||||||||| ||||| | |||||||||||||||||||||| | |||| |||| ||  |||| |||||||    
T  15377817 ttttaagtttattttcataagctcctcagaatagcttatgaaaacagcttataacttatatgaaaacaatctaactttattttatcctttggtatagaa 15377719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 1625932 - 1625867
Alignment:
Q  71 gttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcatt 136  Q
    |||||||| |||||||||| |||||   |||||||||||| ||||||||||| |||| ||||||||    
T  1625932 gttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactttatttcatt 1625867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 28933854 - 28933781
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||| |||||||||||| |||||  ||||||||||| ||||||| ||||||| || |||| || ||||||||||    
T  28933854 tctctaggatagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttata 28933781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 41851968 - 41852013
Alignment:
Q  98 tttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||||||||||||||||||||||||||||| |||| || |||||||    
T  41851968 tttataacttatatgaaaacaatttgacttaattttatcttttgtt 41852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 17952742 - 17952818
Alignment:
Q  74 ctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||| |||||   || || |||||||||||| | |||||||| |||| || ||||||||||||||    
T  17952742 ctccaggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaa 17952818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 33192198 - 33192146
Alignment:
Q  98 tttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||||| |||||||| |||| || || |||||||||||    
T  33192198 tttataacttatatgaaaacagtttgactttattttatcttatgttatagaaa 33192146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 8017477 - 8017410
Alignment:
Q  60 tatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    ||||| |||| |||||||| |||||||||| ||||| ||||| | |||||||||||| ||||| ||||    
T  8017477 tattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaactt 8017410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 43141930 - 43141847
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||| |||||| | ||||||||||||   ||| ||||||||||||| |||||   ||||| |||||||| ||||||||||||||    
T  43141930 taagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactt 43141847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 33256784 - 33256694
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaa 149  Q
    |||||| |||| | ||| |||||| |||||| ||||| | |||||  ||||||||||||| |||||||| |||| || | |||||||||||    
T  33256784 ttattttcatacggtcttcaggatggcttatgaaaactgcttatagtttatatgaaaacagtttgactttattttatctattgttatagaa 33256694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 37276776 - 37276722
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    ||||||||||| ||||| |||||   |||||||||||||||||||| ||||||||    
T  37276776 tctccaggataacttatgaaaacaacttataacttatatgaaaacagtttgactt 37276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 3078651 - 3078728
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatt 121  Q
    |||| |||||| || ||||||||| | | |||||| |||||||||| ||||| | |||| || |||||||||||||||    
T  3078651 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaacagcttattacatatatgaaaacaatt 3078728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 10143202 - 10143125
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| |||||||||| ||||    ||||| ||||||| |||||| |||||||| |||| || ||||||||||||||    
T  10143202 tctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaa 10143125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 29633066 - 29633025
Alignment:
Q  109 tatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  29633066 tatgaaaacaatttgactttattctattttttgttatagaaa 29633025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 37518901 - 37518946
Alignment:
Q  110 atgaaaacaatttgacttcatttcattttttgttatagaaaaagat 155  Q
    ||||||||||||| ||||||  ||||||||||||||||||| ||||    
T  37518901 atgaaaacaattttacttcacatcattttttgttatagaaatagat 37518946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 43173278 - 43173193
Alignment:
Q  47 gctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||  ||||||||||| | |||||| |||||| ||| |||||    |||| |||||||||||| |||||||||| ||||    
T  43173278 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 43173193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 6988138 - 6988066
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaaaa 152  Q
    |||||||||| |||||   ||||||||  || ||||| |||||||||| |||| || ||||||||||||||||    
T  6988138 gatagcttatgaaaacaacttataactagtaagaaaataatttgactttattttatcttttgttatagaaaaa 6988066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 11344349 - 11344401
Alignment:
Q  98 tttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| ||| |||||||||||||||||||  ||| || ||||||||||||||    
T  11344349 tttatagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaa 11344401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 15866679 - 15866767
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||| |||||| || || ||| |||| | ||||||||||||||||| |||  || ||||| ||||||||||||||| | ||||| ||||    
T  15866679 taaggtgttttcagcttgtttacataagctctccaggatagcttatgaaagtggcttatagcttatatgaaaacaagtcgactttattt 15866767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 28039343 - 28039431
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||||| || |||||||||||  || |||| || ||||||| ||||  | |||||  |||||||||||||||| ||||| ||||    
T  28039343 taagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaacaattggactttattt 28039431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 39983401 - 39983329
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaa 116  Q
    |||||| |||| ||||||||| |||  | ||||||||||||||||| |||||   ||||| ||||||||||||    
T  39983401 taagctattttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 39983329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 43205353 - 43205289
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttg 123  Q
    ||||||||||| | |||||  |||||||||| ||||| | ||||| |||||||||||||| ||||    
T  43205353 ttatttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaacagtttg 43205289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 24782118 - 24782012
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||||| |||| ||||||||| |||| | |||| ||||||| |||| |||   | |||||||||||||||||||||||||| || |||| || |||||||    
T  24782118 taagctatttttagtttattttcataagctctcaaggatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattttatcttttgtt 24782019  T
Q  144 atagaaa 150  Q
    |||||||    
T  24782018 atagaaa 24782012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 33787772 - 33787862
Alignment:
Q  60 tatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||| | |||||| |||| ||||| ||||| | ||||||||||||||||| |||||||||||  ||| || ||||||||||||||    
T  33787772 tatttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaa 33787862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 281859 - 281962
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||| |||||| || ||||||||||  | |||| |||||||||||| || || | ||||| ||||||||||||||| ||||||| |||| || |||||||    
T  281859 taagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgtt 281958  T
Q  144 atag 147  Q
    ||||    
T  281959 atag 281962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 29274281 - 29274346
Alignment:
Q  85 cttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||| |||| || ||||| ||||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaa 29274346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 8364988 - 8365064
Alignment:
Q  45 aagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatt 121  Q
    |||||||||| || |||||| |||  |||| ||| |||||||||| ||||| ||||||||||||||| |||||||||    
T  8364988 aagctgttttcagcttattttcatcagttcaccatgatagcttatgaaaacagtttataacttatataaaaacaatt 8365064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 28088238 - 28088309
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaat 120  Q
    |||||| || ||||||||||  | |||||| |||||||||| ||||| ||||||| ||||||||||||||||    
T  28088238 tgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaacaat 28088309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 1403026 - 1402949
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| |||||||||| |||||  |||||| |||||||||||| | ||| |||| |||| || ||||||||||||||    
T  1403026 tctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaa 1402949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 216
Target Start/End: Complemental strand, 8010416 - 8010246
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataactt-atatgaaaacaatttgacttcatttcattttttgt 142  Q
    |||||| |||| |||||||||| ||| ||||||||||||| ||||| ||||| | ||||||||| | ||||||  |  ||||||| |||| | || ||||    
T  8010416 taagctattttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaaatgaaagtagattgactttatttta-ttgttgt 8010318  T
Q  143 tatagaaaaagatgtttacttaagaacctatatgatacgcgcttaattaaactgtttatacaaacatgacctta 216  Q
    |||||||| || | | ||| |||| || |||||||||  | |||||||||  ||||||| ||||||||||||||    
T  8010317 tatagaaatagct-tatacctaagcacttatatgataaacacttaattaagttgtttat-caaacatgacctta 8010246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 24836228 - 24836316
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| | |||||| |||||||||  |||||   |||||  ||||| |||||||||||||||| |||| || ||||||||||||||    
T  24836228 ttatttccataagctctccatgatagcttacgaaaac---ttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaa 24836316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 4006738 - 4006667
Alignment:
Q  79 ggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| |||||   ||||| ||||||| ||||||||||||||| |||| ||  |||||||||||||    
T  4006738 ggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaa 4006667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 6310290 - 6310341
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| ||||||||||||||||| ||||| | ||||| ||||||||||||||    
T  6310290 ttatagcttatatgaaaacaattagactttacttcatcttttgttatagaaa 6310341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 22691560 - 22691611
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttga 124  Q
    |||||||||||| |||| ||||  | ||||||||||||||||||||||||||    
T  22691560 tctccaggataggttatgaaaataggttataacttatatgaaaacaatttga 22691611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 22742394 - 22742323
Alignment:
Q  75 tccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||| ||||| ||||  | ||||| ||||||||||||||||||||||| |||| ||  |||||||||    
T  22742394 tccaggataacttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgttata 22742323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 24476634 - 24476555
Alignment:
Q  71 gttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||  ||||||||||||||| | ||||  |||||||||||| ||||| ||| ||||| || ||||| ||||||||    
T  24476634 gttctccaaaatagcttatcaaaactgcttatcgcttatatgaaaataatttaactacattttatcttttgctatagaaa 24476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 3168275 - 3168341
Alignment:
Q  47 gctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatga 113  Q
    |||||||| || |||||||| || | ||||||||||||||||  ||||| ||||||| |||||||||    
T  3168275 gctgttttcagcttatttccttaagctctccaggatagcttaagaaaacagtttatagcttatatga 3168341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 9093571 - 9093673
Alignment:
Q  48 ctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    ||||||| || |||||| | || |||||| | || ||||||| ||||| | ||||| |||||| ||||||||||| |||| |||| || ||||| |||||    
T  9093571 ctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatag 9093670  T
Q  148 aaa 150  Q
    |||    
T  9093671 aaa 9093673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 25100066 - 25099996
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||| |||||   ||||||||| ||||||||||||||||||  ||||||| ||||| | ||||||    
T  25100066 gatagcttatgaaaacaacttataacttctatgaaaacaatttgactctatttcatattttgctttagaaa 25099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 6014594 - 6014525
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatga 113  Q
    ||||||||||| || ||||||||||| ||||| || |||| |||||  |||| |||||||||| ||||||    
T  6014594 taagctgttttgagattatttccataggttcttcaagataacttatggaaacagtttataactaatatga 6014525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 10150318 - 10150367
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttataga 148  Q
    |||||||| ||||||||||||||||| || |||| || ||||||||||||    
T  10150318 ttataactgatatgaaaacaatttgatttgattttatattttgttataga 10150367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 14492332 - 14492259
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    |||| |||||| ||||| ||||| | ||||| ||| ||| |||||||||||||||||||| || ||||| ||||    
T  14492332 tctctaggataacttatgaaaacagcttatagcttgtatcaaaacaatttgacttcattttatcttttggtata 14492259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 25426214 - 25426141
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||| |||  |||||||||||||||||| ||||  | ||||| |||| |||||| ||||||||||| ||||    
T  25426214 ttatttctataaattctccaggatagcttataaaaatagcttatagcttacatgaaagcaatttgactttattt 25426141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 30784615 - 30784507
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || ||||||||||| || ||||| |||| ||||| |||| || || ||  ||| ||||||  | |||||||| |||| || |||||||    
T  30784615 taagctgttttgagcttatttccataggt-ctccaagataacttatgaaaatggcttgtagtttacatgaaagtagtttgactttattttatcttttgtt 30784517  T
Q  144 atagaaaaag 153  Q
    ||||||||||    
T  30784516 atagaaaaag 30784507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 31583695 - 31583654
Alignment:
Q  109 tatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||||||||||| || | ||||||||||||    
T  31583695 tatgaaaacaatttgacttcattttatctcttgttatagaaa 31583654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 32577993 - 32578042
Alignment:
Q  40 tccttaagctgttttaagtttatttccatatgttctccaggatagcttat 89  Q
    ||||| ||||||||| || ||||||||||||| ||| |||||||||||||    
T  32577993 tccttgagctgttttcagcttatttccatatgctcttcaggatagcttat 32578042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 33828674 - 33828617
Alignment:
Q  75 tccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||| |||||||||| |||||   |||||||||||| |||||||||||||||| ||||    
T  33828674 tccatgatagcttattaaaacaacttataacttatacgaaaacaatttgactttattt 33828617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 6647431 - 6647342
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||| |||| | |||| | |||||||||| ||||| | ||||||| ||||| |||  |||||||||| |||  |||||||||||||||||    
T  6647431 ttattttcataagctctctaagatagcttatgaaaacagattataacctatattaaagtaatttgactttatt--attttttgttatagaaa 6647342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 7714023 - 7713983
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttat 145  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  7714023 cttatatgaaaacaatttgactttattttatcttttgttat 7713983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 29940794 - 29940746
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttatagaaaaag 153  Q
    |||| |||||||||| ||||||| |||| || |||||||||||||||||    
T  29940794 cttaaatgaaaacaaattgactttattttatcttttgttatagaaaaag 29940746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 41452582 - 41452486
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcatttttt 140  Q
    ||||||||||| |  ||||||||| |  |||||||||||||||||| ||||| | ||| |||| ||||||||||| |||||||| |||||| |||||    
T  41452582 taagctgttttcaccttatttccacaacttctccaggatagcttatgaaaacagcttacaactaatatgaaaacagtttgactttatttcaattttt 41452486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 1217833 - 1217899
Alignment:
Q  66 catatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||| |||||| |||||||||||| ||||| | |||||||||| ||||||||||||| |||||||||    
T  1217833 cataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcattt 1217899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 24887298 - 24887400
Alignment:
Q  48 ctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatag 147  Q
    ||||||| || ||||| ||||| | ||||||||||||||||| ||||| | || || |||||||||| ||| |||||||| |||| || | |||||||||    
T  24887298 ctgttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatag 24887397  T
Q  148 aaa 150  Q
    |||    
T  24887398 aaa 24887400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 38462340 - 38462234
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||| |||||| || ||||||||||| | | ||  ||||||||||| ||||| ||||||| | |||||||||||| |||||||| |||| || ||||| |    
T  38462340 taagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggt 38462241  T
Q  144 atagaaa 150  Q
    |||||||    
T  38462240 atagaaa 38462234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 43079746 - 43079695
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||| |||| ||||| ||| |||||||||||||||||    
T  43079746 ttataacttatatgaaaacgatttaacttccttttattttttgttatagaaa 43079695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 36646393 - 36646499
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| |  ||||||| |||   |||| |||||||||||| |||||   |||||||||||||||||||||||  |||| |||| || ||||||     
T  36646393 taagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataacttatatgaaaacaattatactttattttatcttttgtc 36646492  T
Q  144 atagaaa 150  Q
    |||||||    
T  36646493 atagaaa 36646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 45432950 - 45433056
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    |||| |||||| || ||||||||||| | ||| ||||||  ||| | |||||  |||||| || ||||||||||||||| ||||||||| || |||| ||    
T  45432950 taagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaatttatagctcatatgaaaacaatttaacttcattttatcttttctt 45433049  T
Q  144 atagaaa 150  Q
    |||||||    
T  45433050 atagaaa 45433056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 37273178 - 37273107
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggt---ttataacttatatgaaaacaatttgactt 127  Q
    ||||||||||| |||||||| |||||||||| ||||| ||   ||||| ||||||| |||||||||||||||    
T  37273178 ttatttccataagttctccaagatagcttatgaaaacagtttattatatcttatataaaaacaatttgactt 37273107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 1395688 - 1395624
Alignment:
Q  86 ttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||| ||||| ||| ||| |||||||||||| |||||||||| |||| || ||||||||||||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaa 1395624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 28306217 - 28306113
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||| |||||||| |||||||  || | ||| | | ||||||||| |||||   || ||||||||||||||||| |||||||| |||| | ||||||||    
T  28306217 taagcagttttaagcttatttctgtaagctcttctgtatagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttattttactttttgtt 28306118  T
Q  144 ataga 148  Q
    |||||    
T  28306117 ataga 28306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 21367725 - 21367638
Alignment:
Q  45 aagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||||||| || |||||| |||| |||||||| |||||||||| |||||   |||||  ||||| ||||||||||| |||| ||||    
T  21367725 aagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactttattt 21367638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 3365428 - 3365358
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||| ||||| ||||| || |||||| ||||||| ||||||| |||| || || |||||||||||    
T  3365428 gatagcttatgaaaacagtttacaatttatataaaaacaacttgacttaattttatcttatgttatagaaa 3365358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 29600772 - 29600842
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| |||| ||||||||||||| ||||| ||||||||| |||| || |||| || ||||| ||||||||    
T  29600772 gataggttatgaaaacggtttatagcttatttgaaaacaaattgattttattttatgttttgctatagaaa 29600842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 52619026 - 52618956
Alignment:
Q  80 gatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| | ||||| | |||||||||||||||||||||||| |||| |||| ||  |||||| ||||||    
T  52619026 gatagcttgtgaaaacagcttataacttatatgaaaacaatttaactttatttaatcatttgttttagaaa 52618956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 10101548 - 10101593
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||||| |||| |||| || ||||||||||||||    
T  10101548 cttatatgaaaacaatttaactttattttatcttttgttatagaaa 10101593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 10212473 - 10212518
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||||| |||| |||| || ||||||||||||||    
T  10212473 cttatatgaaaacaatttaactttattttatcttttgttatagaaa 10212518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 33307650 - 33307691
Alignment:
Q  103 aacttatatgaaaacaatttgacttcatttcattttttgtta 144  Q
    |||||||||||||| |||||||||| ||||||| ||||||||    
T  33307650 aacttatatgaaaataatttgactttatttcatattttgtta 33307691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 49586988 - 49587033
Alignment:
Q  105 cttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||    
T  49586988 cttatatgaaaacagtttgactttattttatcttttgttatagaaa 49587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 51278225 - 51278274
Alignment:
Q  101 ataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||| ||||||||| |||||||| |||| || ||||||||||||||    
T  51278225 ataacttaaatgaaaacagtttgactttatttaatattttgttatagaaa 51278274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 15304420 - 15304464
Alignment:
Q  106 ttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaa 15304464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 24158529 - 24158581
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatat 111  Q
    ||||||||||| | ||||||||||||||||| ||||| | |||| ||||||||    
T  24158529 ttatttccataagctctccaggatagcttatgaaaacagcttattacttatat 24158581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 33405200 - 33405284
Alignment:
Q  66 catatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||| ||||| || |||||||||| ||||| | ||||| ||||||||||||||| || |||| |||| |  ||||| ||||||||    
T  33405200 cataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaa 33405284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 48286836 - 48286904
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    ||||||| ||| | ||| || |||| ||||| ||||| |||||||||||||||| ||||||||| ||||    
T  48286836 ttatttctataagctctacatgataacttatgaaaacagtttataacttatatggaaacaatttaactt 48286904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 49465683 - 49465727
Alignment:
Q  51 ttttaagtttatttccatatgttctccaggatagcttatcaaaac 95  Q
    ||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  49465683 ttttaagcttatttccataagttctccagtatagcttatgaaaac 49465727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 54325048 - 54325154
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| ||||||| ||||||   |||||| |||||||| | ||||  | ||||| |||||||||||||| |||||||| |||| || ||||||     
T  54325048 taagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttttgta 54325147  T
Q  144 atagaaa 150  Q
    |||||||    
T  54325148 atagaaa 54325154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 10192314 - 10192241
Alignment:
Q  73 tctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttata 146  Q
    ||||||||||||||| | |||||   ||||||||||||||||||||||||||||| |||  || ||||||||||    
T  10192314 tctccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttata 10192241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 18628559 - 18628636
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgact 126  Q
    |||||| || ||||||||||| | |||||| |||| ||||| ||||| ||||||||||||||| |||||| |||||||    
T  18628559 tgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgact 18628636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 3175977 - 3175905
Alignment:
Q  77 caggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaa 149  Q
    ||||||||||||| ||||| | ||||||||||  ||||||||||||||||| |||| || ||||| |||||||    
T  3175977 caggatagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttttgctatagaa 3175905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 7694021 - 7694112
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcat 135  Q
    |||| |||||| || |||||||||||   ||||||||||| ||||| ||||| | ||||| ||||||  |||||| ||||||||||||||||    
T  7694021 taagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgacttcatttcat 7694112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 20907379 - 20907320
Alignment:
Q  71 gttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcat 130  Q
    ||||| ||||||||||| | ||||| ||||||| |||||||||||||||||||| |||||    
T  20907379 gttcttcaggatagcttgtgaaaacagtttatagcttatatgaaaacaatttgatttcat 20907320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 19154797 - 19154699
Alignment:
Q  52 tttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||| |||||||||| || |||||| |||||| | ||| ||||| ||||||| ||||||||||| |||||||| || ||||  | ||||||| ||||||    
T  19154797 tttatgtttatttccctaagttctctaggataccgtatgaaaacagtttatagcttatatgaaagcaatttgatttgattttttcttttgttttagaaa 19154699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 4071904 - 4071835
Alignment:
Q  81 atagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| |||   ||||| |||||||||||| |||||||||| |||| || ||||||||||||||    
T  4071904 atagcttatcataacaacttatagcttatatgaaaataatttgactttattttatcttttgttatagaaa 4071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 8130192 - 8130127
Alignment:
Q  85 cttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| ||||| ||||||| |||||||||||| |||||||||| || | || ||||||||||||||    
T  8130192 cttatgaaaacagtttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaa 8130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 24091491 - 24091434
Alignment:
Q  75 tccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||||| ||||| ||||| ||||||| |||||||||||| |||||||||| ||||    
T  24091491 tccaggataacttatgaaaacagtttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 30207582 - 30207686
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || |||||||||||   |||| | | |||||||| |||||   ||||| |||||||||||||| ||||| || |||| ||||||||||    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgtt 30207680  T
Q  144 atagaa 149  Q
    ||||||    
T  30207681 atagaa 30207686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 31038917 - 31038966
Alignment:
Q  83 agcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||| |||| || ||||||||||||||||||||||||||||| ||||    
T  31038917 agcttataaaaatggcttataacttatatgaaaacaatttgactttattt 31038966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 53626795 - 53626727
Alignment:
Q  84 gcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaaaa 152  Q
    |||||| ||||| | ||||| |||||||||||||| ||||| || |||| || ||||||||||||||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaaaa 53626727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 2996617 - 2996550
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgact 126  Q
    |||||| |||| | |||||| |||||||||| |||||   ||||||||||||| ||||||||||||||    
T  2996617 ttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaatttgact 2996550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 8147931 - 8147880
Alignment:
Q  64 tccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaa 115  Q
    |||||| |||||| |||||||||||| ||||| || ||||||||||||||||    
T  8147931 tccataagttctctaggatagcttatgaaaacagtatataacttatatgaaa 8147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 21952965 - 21952914
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| ||||||||||||||||||||||| |||| | || ||||||||||||    
T  21952965 ttatagcttatatgaaaacaatttgactttattttacttgttgttatagaaa 21952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 26884049 - 26883966
Alignment:
Q  49 tgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    |||||| ||||||||| |||| ||||||||  | || |||  ||||||  ||||| |||||||||||||||||| |||||||||    
T  26884049 tgttttcagtttattttcataggttctccaataaagtttacgaaaacgacttatagcttatatgaaaacaatttaacttcattt 26883966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 30024704 - 30024653
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| |||||||||||||||||| |||| |||| || ||||||||||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatcttttgttatagaaa 30024653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 30338602 - 30338709
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaa-cggtttataacttatatgaaaacaatttgacttcatttcattttttgt 142  Q
    |||||||||||| | |||||| ||||   |||||| || ||||||| |||| | ||||||| |||||||||||||| ||| |||| |||  || ||||||    
T  30338602 taagctgttttatgcttattttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatcttttgt 30338701  T
Q  143 tatagaaa 150  Q
    ||||||||    
T  30338702 tatagaaa 30338709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 36722687 - 36722754
Alignment:
Q  51 ttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaaca 118  Q
    ||||||| |||||| |||| | ||| ||||||| |||||||||||   ||||||||||||||||||||    
T  36722687 ttttaagcttattttcataagctcttcaggataacttatcaaaacaacttataacttatatgaaaaca 36722754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 49219143 - 49219092
Alignment:
Q  99 ttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||| |||||||||||| |||||||||| |||| || ||||||||||||||    
T  49219143 ttatagcttatatgaaaataatttgactttattttatattttgttatagaaa 49219092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 6364208 - 6364102
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgtt 143  Q
    ||||||||||| || |||||| | || ||||||||  ||||||||| ||||  | ||||| ||||| |||| | ||||| |||| |||| || |||||||    
T  6364208 taagctgttttcagcttattttcgtaagttctccattatagcttatgaaaattgcttatagcttatgtgaacagaatttcactttattttatcttttgtt 6364109  T
Q  144 atagaaa 150  Q
    |||||||    
T  6364108 atagaaa 6364102  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 21157826 - 21157744
Alignment:
Q  45 aagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgactt 127  Q
    |||||||||| || ||||||||||| | ||| ||||||||| ||| |||||   ||||| |||| ||||||||| ||||||||    
T  21157826 aagctgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgactt 21157744  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 26520272 - 26520346
Alignment:
Q  76 ccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||| ||| ||||  | ||||| |||| | ||||||||||| |||| ||||||| ||||||||||||||    
T  26520272 ccaggatagcatataaaaatagcttatagcttacacgaaaacaatttaactttatttcatcttttgttatagaaa 26520346  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 49803265 - 49803164
Alignment:
Q  46 agctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttat 145  Q
    ||||||||| || |||||  | || |||||||| || |||||||||||||    || ||||||| |||||||||||| ||||||||| || ||||| |||    
T  49803265 agctgttttcagcttattgtcttaagttctccaagaaagcttatcaaaaca---tacaacttatgtgaaaacaatttaacttcattttatcttttgctat 49803169  T
Q  146 agaaa 150  Q
    |||||    
T  49803168 agaaa 49803164  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 17975380 - 17975457
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatt 121  Q
    |||| |||||| || ||||||||| | | |||||| |||||||||| ||||| | |||| || |||||||||||||||    
T  17975380 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaacagcttattacatatatgaaaacaatt 17975457  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 19429768 - 19429723
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttat 89  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||    
T  19429768 taagctgttttcagcttatttccataagctctccaggatagcttat 19429723  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 21043246 - 21043303
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggttta 101  Q
    ||||||||||| ||| ||||| |||||| ||| ||||||||||||| ||||| |||||    
T  21043246 taagctgttttcagtgtattttcatatgctcttcaggatagcttatgaaaacagttta 21043303  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 23819133 - 23819060
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcattt 132  Q
    ||||||| ||| | ||| || |||||||||| |||||   |||||||||||||||||||| ||||||| |||||    
T  23819133 ttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagtttgactacattt 23819060  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 44319991 - 44319903
Alignment:
Q  61 atttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||| |||| |||||| |||||||||||||||||  | || || |||||||||||||| || ||||| |||| || |||| |||||||||    
T  44319991 attttcataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttattttatctttt-ttatagaaa 44319903  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 43824342 - 43824262
Alignment:
Q  44 taagctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttga 124  Q
    |||| |||||| || ||||||||||| | | ||||||||| ||||  ||||  | |||||||||||||||||| |||||||    
T  43824342 taagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttatatgaaaagaatttga 43824262  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 45128323 - 45128427
Alignment:
Q  46 agctgttttaagtttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttat 145  Q
    ||||||||| || ||||||||||| | | |  |||| || |||| |||||  |||||| ||||||||| || ||||||| || |||| || |||||||||    
T  45128323 agctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttat 45128422  T
Q  146 agaaa 150  Q
    |||||    
T  45128423 agaaa 45128427  T

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Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 9842 - 9892
Alignment:
Q  100 tataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||||||||||  |||||||| |||| |||||||||||||||||    
T  9842 tataacttatatgaaaactttttgacttaattttattttttgttatagaaa 9892  T

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Target: scaffold0654 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 6663 - 6754
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| | ||| ||  ||| |||||||||||   || |||| | ||||||||||||||||||| | || |||||||||||||||||    
T  6663 ttatttccataagctctgcataataacttatcaaaacaacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaa 6754  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 116582 - 116673
Alignment:
Q  59 ttatttccatatgttctccaggatagcttatcaaaacggtttataacttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    ||||||||||| | ||| ||  ||| |||||||||||   || |||| | ||||||||||||||||||| | || |||||||||||||||||    
T  116582 ttatttccataagctctgcataataacttatcaaaacaacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaa 116673  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 27573 - 27529
Alignment:
Q  106 ttatatgaaaacaatttgacttcatttcattttttgttatagaaa 150  Q
    |||||||||||||||||||||| |||| || || |||||||||||    
T  27573 ttatatgaaaacaatttgactttattttatcttctgttatagaaa 27529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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