View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11629_high_14 (Length: 262)
Name: NF11629_high_14
Description: NF11629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11629_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 40199716 - 40199964
Alignment:
| Q |
1 |
taacacattcaaatttcacctttgtatgactagtataagtatatcttttatttttcccttctaacagttcaagcaacgcttgcaggaagctcgtaagcgt |
100 |
Q |
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||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40199716 |
taacacattcaaatttcacatttgtatgactggtataagtatatcttttatttttcccttctaacagttcaagcaacgcttgcaggaagctcgtaagcgt |
40199815 |
T |
|
| Q |
101 |
tttgacaaagctgcccttgtctatgaccaggtacttattgtgaaaagatttcagagggtgatgaactcttcatccatagatttactttccttctgttaca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40199816 |
tttgacaaagctgcccttgtctatgaccaggtacttattgtgaaaagatttcagagggtgatgaactcttcatccatagatttactttccttctgttaca |
40199915 |
T |
|
| Q |
201 |
cacgtttagtttgagctgtatttactgaatcagaaacccattttgatgt |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40199916 |
cacgtttagtttgagctgtatttactgaatcagaaacccattttgatgt |
40199964 |
T |
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