View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11630_high_12 (Length: 260)
Name: NF11630_high_12
Description: NF11630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11630_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 3482995 - 3482743
Alignment:
| Q |
1 |
aataaaaaggcctatagcccttaacaataagagaattaaaatcttctaggaattaaaatatcaagtttgaaaagctccaccaacggattatttatccttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
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| T |
3482995 |
aataaaaaggcctatagcccttaacaataagagaattaaaatcgtctaggaattaaaatatcaagtttgaaaagctccaccaacgaattatttacccttt |
3482896 |
T |
|
| Q |
101 |
cactctttttcaactctcaaacaaagtcttaagaaataattatagtttttaactatacttctgatttttatatttgttatcctcactgtgctacgatgag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3482895 |
tactctttttcaactctcaaacaaagtcttaagaaataattgcagtttttaactatacttctgatttttatatttgttatcctcactgtgctacgatgag |
3482796 |
T |
|
| Q |
201 |
tactttcctccacaccactcatttcaacttcaacctttggtgtccgccctttg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3482795 |
tactttcctccacaccactcatttcaacttcaacctttggtgtccgccctttg |
3482743 |
T |
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