View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11630_high_2 (Length: 453)
Name: NF11630_high_2
Description: NF11630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11630_high_2 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 17 - 405
Target Start/End: Original strand, 33081993 - 33082382
Alignment:
| Q |
17 |
aagcttcaccttgcaccgcatattggtcattagtaaattgtataaataaatgtatagatacctatgaccatctctaatggggtctctttcatttaagatc |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33081993 |
aagcttcaccttgtaccgcatattggtcattagtaaattgtataaataaatgtatagatacctatgaccatctctaatggggtctctttcatttaagatc |
33082092 |
T |
|
| Q |
117 |
tgatatttatgaggtaccttcattagagagaaataattttgaatacttaa-aagatcaatgtctacattaaacattcactcttgagtgtgatccgccaat |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33082093 |
tgatatttatgaggtaccttcattagagagaaataattttgaatacttaataagatcaatgtctacattaaacattcactcttgagtgtgatccgccaat |
33082192 |
T |
|
| Q |
216 |
attttatcattaaaataaatggttttgacaaaacaatcaatctatgatctacaatgttcaaatggcgcctataacattttagagtcttgaataattggat |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33082193 |
attttatcattaaaataaatggttttgacaaaacaatcaatctatgatctacaatgttcaaatggcgcctataacattttagagtcttgaataattggat |
33082292 |
T |
|
| Q |
316 |
caatagaagcctcaacaagttctgaatttatgcattttacaacaactactgcatcagaagcaacaagtttgataaataattttgtagctc |
405 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33082293 |
caatagaagccacaacaagttctgaatttatgcattttacaacaactactgcatcagaagcaacaagtttgataaataattttgtagctc |
33082382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University