View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11630_low_13 (Length: 256)
Name: NF11630_low_13
Description: NF11630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11630_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 47900239 - 47900474
Alignment:
| Q |
16 |
aaaaacatgtgaaccatagaaaaatatacagatcagaaaactctaacacaacaaaatctacacagtttgaaacaaaagctgcaacagatccaaaacacaa |
115 |
Q |
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| T |
47900239 |
aaaaacatgtgaaccatagaaaaatatacagatcagaaaactctaacacaacaaaatctacacagtttaaaacaaaagctgcaacagatccaaaacagaa |
47900338 |
T |
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| Q |
116 |
ggaagtgtgattaaagtaccttgtattcatcaccgaattcaatttgaaaagcatcacgaatagcctcagcagaagctctatgtccaccaccagtatcact |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47900339 |
ggaagtgtgattaaagtaccttgtattcatcaccgaattcaatttgaaaagcatcacgaatagcctcagcagaagctctatgtccaccaccagtatcact |
47900438 |
T |
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| Q |
216 |
catgagaatcaacacattttttgttctctctgctcc |
251 |
Q |
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||||||||||||||||||||||||||| |||||||| |
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| T |
47900439 |
catgagaatcaacacattttttgttctttctgctcc |
47900474 |
T |
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