View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11632_low_1 (Length: 1002)
Name: NF11632_low_1
Description: NF11632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11632_low_1 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 860; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 860; E-Value: 0
Query Start/End: Original strand, 1 - 981
Target Start/End: Original strand, 39521391 - 39522371
Alignment:
| Q |
1 |
tttggtccccgccgtaaagagggtgtttgttttccaacgatggttgggagtgaaaaccgccactataagtagttaagccccgaccattagaaccgatgta |
100 |
Q |
| |
|
||||||| ||| ||| |||| || ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39521391 |
tttggtcaccgacgttaagacggagtttggtttccaacgatcgttgtgagtgtaaaccgccactataagtagttaagccccgaccagtagaaccgatgta |
39521490 |
T |
 |
| Q |
101 |
attgaaacgtgctactgaatcggggattaaatgaagagggagcataaagagttcaattgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39521491 |
attgaaacgtgctactgaatcggggattaaatgaagagggagcataaagagttcaattgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtg |
39521590 |
T |
 |
| Q |
201 |
attgtgaatctttttctgatgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaatgaaaccag |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39521591 |
attgtgaatctttttctgatgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaaggaaaccag |
39521690 |
T |
 |
| Q |
301 |
gaactgaaacggtgaattttgcagaggaaaggttagttggtgaagagaatgaaaagaaatgaaaacgtaccatgtaagtgttgtttggaacggttttgaa |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39521691 |
gaactgaaacggtgaattttgcagaggaaaggttagttggtgaagagaatgaaaagaaatggaaacgtaccatgtaagtgttgcttggaacggttttgaa |
39521790 |
T |
 |
| Q |
401 |
ttcataggaagaattggaaaggaaaattcttgctgtttggttgagaggtgaagacactggtgattgacttgttacgttggagttactttcgctgaataat |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
39521791 |
ttcataggaagaattggaaaggaaaattcttgctgtttggttgagaggtgaagacactggtgattgacttgttactttggagttactttcgctgaataat |
39521890 |
T |
 |
| Q |
501 |
tttttcgggtaagcatggtttgattcaccaatataatggttgttattttcatccacgtcgacatctgatccacaattgatgaagtatgtgtcttgaggat |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39521891 |
tttttcgggtaagcatggtttgattcaccaatataaaggttgttattttcattcacgtcgatatctgatccacaattgatgaagtatgtgtcttgaggat |
39521990 |
T |
 |
| Q |
601 |
cgtatccgagtgaggggaattgtaatgatgagaattgaagnnnnnnngcaagtagaaagatagagcgttgaattgtgtggaagtgaaaggttgacatagt |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
39521991 |
cgtatccgagtgaggggaattgtaatgatgagaattgaagaaaaaaagcaaggagaaagatagagcgttgaattgtgtggaagtgaaaggttgacatggt |
39522090 |
T |
 |
| Q |
701 |
gagagaggaaaattgtgtttgtttgatgannnnnnnnaagttatgaaattgatgattgctattcatagaagttggtagaagtagggagtggagaagagaa |
800 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39522091 |
gagagaggaaaattgtgtttgtttgatgattttttttaagttatgaaattgatgattgctattcatagaagttggtagaagtagggagtggagaagagaa |
39522190 |
T |
 |
| Q |
801 |
ggggaaccaatgatgaagaagacatagataagaggaagactttagctgtggactggttaagtcgtcacctttgaattttcttatttcttgtttgtttctc |
900 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39522191 |
ggggaaccaatgatgaagaagacatagataagaggaagactttagctgtggactggttaagtcgtcacctttgaattttcttatttcttgtttgtttctc |
39522290 |
T |
 |
| Q |
901 |
tctttaattttaaatataaataaaatatttgaaagttgatttatcacctaccaataccatgactatagtataacacactct |
981 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39522291 |
tctttaattttaaatataaataaaatatttgaaagttgatttatcacctaccaataccatgactatagtataacacactct |
39522371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 96 - 640
Target Start/End: Original strand, 39544279 - 39544820
Alignment:
| Q |
96 |
atgtaattgaaacgtgctactgaatcggggattaaatgaagagggagcataaagagttcaattgcattaacaaacgcaaatgatgatgtttgaggtgtga |
195 |
Q |
| |
|
|||||||||||||| |||| ||||| ||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
39544279 |
atgtaattgaaacgagctattgaattgggtattaaatgaagagggagaataaagagttcaaatgcattaaaaaacgcaaatgaagatgtttgaggtgtga |
39544378 |
T |
 |
| Q |
196 |
aagtgattgtgaatctttttctgatgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaatgaa |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
39544379 |
aagtgattgtgaatctttttctgatgattttaacgtaatactcttttactaaagaagagttggtggtgttttcagagttgaaattttgtaacagaatgaa |
39544478 |
T |
 |
| Q |
296 |
accaggaactgaaacggtgaattttgcagaggaaaggttagttggtgaagagaatgaaaagaaatgaaaacgtaccatgtaagtgttgtttggaacggtt |
395 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| | ||| |
|
|
| T |
39544479 |
accagggactgaaacattgaattttgcagaggaaaggttagttggtgaagagaatgaaaagaaatggaaacataccatgtaggtgttgtttggtatggta |
39544578 |
T |
 |
| Q |
396 |
ttgaattcataggaagaattggaaaggaaaattcttgctgtttggttgagaggtgaagacactggtgattgacttgttacgttggagttactttcgctga |
495 |
Q |
| |
|
|||||||||||||| | |||| |||| || ||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||| |||| |
|
|
| T |
39544579 |
gaaaattcataggaagactcggaatggaatatccttgctgtttggtagagaggtgaaaacactggtgattgacttgttactttggag---ctttttctga |
39544675 |
T |
 |
| Q |
496 |
ataattttttcgggtaagcatggtttgattcaccaatataatggttgttattttcatccacgtcgacatctgatccacaattgatgaagtatgtgtcttg |
595 |
Q |
| |
|
| | |||| ||||||| | |||||||||||||||||||| ||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||| |
|
|
| T |
39544676 |
aacttgtttttgggtaagtagggtttgattcaccaatataaaggttgttattttcattcacgtcaatatctgatccgcaattgatgaagtatgtgtcttg |
39544775 |
T |
 |
| Q |
596 |
aggatcgtatccgagtgaggggaattgtaatgatgagaattgaag |
640 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
39544776 |
gtgatcgtatccgagtgagggaaattgtaatgatgcgaattgaag |
39544820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 116 - 640
Target Start/End: Original strand, 39576151 - 39576675
Alignment:
| Q |
116 |
tgaatcggggattaaatgaagagggagcataaagagttcaattgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtgattgtgaatcttttt |
215 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
39576151 |
tgaatcagggattaaatgaaccggaagcataaagagttctattgcattaacaaacgcaaatgatgatgtttgaggtgtgaatatgattttgaatcttttt |
39576250 |
T |
 |
| Q |
216 |
ctgatgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaatgaaaccaggaactgaaacggtga |
315 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||| |
|
|
| T |
39576251 |
ctaatgattttaacgtaatactcttttactaaagcagatttggtggtgttttcagcgttgaaattatgtaacagaaggaaaccaggaacggaaatgttga |
39576350 |
T |
 |
| Q |
316 |
attttgcagaggaaaggttagttggtgaagagaatgaaaagaaatgaaaacgtaccatgtaagtgttgtttggaacggttttgaattcataggaagaatt |
415 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| | ||| ||||| ||||| || | |
|
|
| T |
39576351 |
attttgcagtggaaagtttagttggtgaagagaatgaaaagaaacggaaacgtaccatataagtgttgtttggtatggtagaaaattcgtaggaggattc |
39576450 |
T |
 |
| Q |
416 |
ggaaaggaaaattcttgctgtttggttgagaggtgaagacactggtgattgacttgttacgttggagttactttcgctgaataattttttcgggtaagca |
515 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||| |||| || | ||| | |||| | |||| ||||||| ||||||| ||||||||| |
|
|
| T |
39576451 |
agaatggaaaattcttgctgtttggtaaagaggtgaagacactgatgatggattggtttctatggaacttctttggctgaatgattttttagggtaagca |
39576550 |
T |
 |
| Q |
516 |
tggtttgattcaccaatataatggttgttattttcatccacgtcgacatctgatccacaattgatgaagtatgtgtcttgaggatcgtatccgagtgagg |
615 |
Q |
| |
|
||||||||||||||||||||| | || |||||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| | |
|
|
| T |
39576551 |
tggtttgattcaccaatataaagattcttattttcattcacgtcgatatctgatccacaattgatgaagtatgtctcttgatgatcgtatccgagtgcag |
39576650 |
T |
 |
| Q |
616 |
ggaattgtaatgatgagaattgaag |
640 |
Q |
| |
|
|||| |||| ||||||||||||||| |
|
|
| T |
39576651 |
ggaagtgtagtgatgagaattgaag |
39576675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 120 - 469
Target Start/End: Original strand, 39525007 - 39525356
Alignment:
| Q |
120 |
tcggggattaaatgaagagggagcataaagagttcaattgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtgattgtgaatctttttctga |
219 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||||||||| |||| |||||||||| | ||||||||||||| |||||| ||||| ||||||||| |
|
|
| T |
39525007 |
tcggggattaaatgaacagggagcataaagagttctattgcattagcaaaggcaaatgatgctttttgaggtgtgaacgtgattttgaatttttttctga |
39525106 |
T |
 |
| Q |
220 |
tgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaatgaaaccaggaactgaaacggtgaattt |
319 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39525107 |
tgattttaaggtaatactcttttactaaaggagagttggtggtgttttttgcatcgaaattttgtaacagaatgaaaccagggactgaaacggtgaattt |
39525206 |
T |
 |
| Q |
320 |
tgcagaggaaaggttagttggtgaagagaatgaaaagaaatgaaaacgtaccatgtaagtgttgtttggaacggttttgaattcataggaagaattggaa |
419 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| || || |||| | |||| |
|
|
| T |
39525207 |
tgcagtggaaaggttaagtggtgaagagaatgaaaagaaatggaaacgtaccatgtaggtgttgtttggtacggttttgaactcgtataaagattcggaa |
39525306 |
T |
 |
| Q |
420 |
aggaaaattcttgctgtttggttgagaggtgaagacactggtgattgact |
469 |
Q |
| |
|
| || || ||||||||||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
39525307 |
tgaaatatccttgctgtttggtagagaggtgaaggcactgatgattgact |
39525356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 114 - 473
Target Start/End: Original strand, 39511258 - 39511617
Alignment:
| Q |
114 |
actgaatcggggattaaatgaagagggagcataaagagttcaattgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtgattgtgaatcttt |
213 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| ||||||||| ||||| |||||||| || | ||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
39511258 |
actgaatcagggattaaatgaacggggagcacaaagagttctattgcgttaacaaatgcgagtgatgatttttgaggtgtgaaagtgattttgaatcttt |
39511357 |
T |
 |
| Q |
214 |
ttctgatgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaatgaaaccaggaactgaaacggt |
313 |
Q |
| |
|
|||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
39511358 |
ttctgatgatttgaacgtagtattcttttactaaaggagagttggtggtgttttcagcgttgaaattttgtaacagaatgaaaccaggaactgaaacagt |
39511457 |
T |
 |
| Q |
314 |
gaattttgcagaggaaaggttagttggtgaagagaatgaaaagaaatgaaaacgtaccatgtaagtgttgtttggaacggttttgaattcataggaagaa |
413 |
Q |
| |
|
||||||||||| |||||| |||||||||| ||||||||||| |||||| ||||||||||| || ||||||||||| | |||||||||||| || |||| |
|
|
| T |
39511458 |
gaattttgcagtggaaagtttagttggtgtagagaatgaaaggaaatggaaacgtaccatataggtgttgtttgggatggttttgaattcgtaccaagat |
39511557 |
T |
 |
| Q |
414 |
ttggaaaggaaaattcttgctgtttggttgagaggtgaagacactggtgattgacttgtt |
473 |
Q |
| |
|
| |||| ||||||| ||||| ||||||| ||||| ||||| |||| ||||||| ||||| |
|
|
| T |
39511558 |
tcggaacggaaaatccttgcagtttggtagagagatgaaggaactgatgattgatttgtt |
39511617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 54 - 640
Target Start/End: Original strand, 39580629 - 39581216
Alignment:
| Q |
54 |
aaaccgccactataagtagttaagccccgaccattagaaccgatgtaattgaaacgtgctactgaatcggggattaaatgaagagggagcataaagagtt |
153 |
Q |
| |
|
||||||||| | |||| || |||||| ||||| ||||| |||||||||||| ||| ||||| |||||||| |||||| ||||| |||||||||| |
|
|
| T |
39580629 |
aaaccgccagtgtaagaagataagccttgaccagtagaattaatgtaattgaaatgtgtgactgattcggggatgaaatgagtggggagtataaagagtt |
39580728 |
T |
 |
| Q |
154 |
caattgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtgattgtgaatctttttctgatgattttaacgtaatactcttttact-aaaggag |
252 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | | ||||||||| | |||| ||||| | | |||| | |
|
|
| T |
39580729 |
ccattgcattaacaaacgcaaatgatgaggtttgaggtgtgaaagtgattttgaatcttttacgggtgattttaaagaaatattctttaattgaaagcgg |
39580828 |
T |
 |
| Q |
253 |
agttggtggtgttttcagcgttgaaattatgtaacagaatgaaaccaggaactgaaacggtgaattttgcagaggaaaggttagttggtgaagagaatga |
352 |
Q |
| |
|
|||| | ||| ||||| ||||||||| |||||| |||| |||||| |||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
39580829 |
agtttata------tca------aaattttgtaacagagagaaacctggaaaggaaacgttgaattttgcagtggaaagattagttggtaaagagaatag |
39580916 |
T |
 |
| Q |
353 |
aaagaaatgaaaacgtaccatgtaagtgttgtttggaacggttttgaattcataggaagaattggaaaggaaaattcttgctgtttggttgagaggtgaa |
452 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| |||| |||||| |||| || |||||||||||| |||||||||| |
|
|
| T |
39580917 |
aaagaaatggaaacgtaccatgtaagtgttgtttggtacggttttgaattcgtagaaagatttggaagggaatataattgctgtttggtagagaggtgaa |
39581016 |
T |
 |
| Q |
453 |
---------gaca---ctggtgattgacttgttacgttggagttactttcgctgaataattttttcgggtaagcatggtttgattcaccaatataatggt |
540 |
Q |
| |
|
|| | || ||||||||||||||| |||||| |||| |||||| | | ||||||| |||| | |||||||||||||||||||| || |
|
|
| T |
39581017 |
agtggtgttgatagtgatgatgattgacttgttactttggag---cttttgctgaaaactgttttcggataagtagggtttgattcaccaatataaacgt |
39581113 |
T |
 |
| Q |
541 |
tgttattttcatccacgtcgacatctgatccacaattgatgaagtatgtgtcttgaggatcgt---atccgagtgaggggaattgtaatgatgagaattg |
637 |
Q |
| |
|
||||| ||||| || || | ||||||||| ||||||||||||||||||| ||| |||| | ||||||| |||| |||||||||||||||||||| |
|
|
| T |
39581114 |
tgttactttcagtaacatcaaaatctgatccgcaattgatgaagtatgtgtgttggggattatataatccgagcgaggaaaattgtaatgatgagaattg |
39581213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 750 - 901
Target Start/End: Original strand, 39581306 - 39581459
Alignment:
| Q |
750 |
tgatgattgctattcatagaagttggtagaagtagggagtgg-agaagagaagggga--accaatgatgaagaagacatagataagaggaagactttagc |
846 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||| | |||||| ||||||| || | |
|
|
| T |
39581306 |
tgatgactgctattcatagaagttagtagaagtagggagtgggagaagagaagggggggaccaatga---agaagacttgcataagaagaagactctatc |
39581402 |
T |
 |
| Q |
847 |
tgtggactgg--ttaagtcgtcacctttgaattttcttatttcttgtttgtttctct |
901 |
Q |
| |
|
||||||||| |||||| ||| |||||||||||||| || ||| ||||||||||| |
|
|
| T |
39581403 |
tgtggactgtgattaagttgtccgctttgaattttctttttccttatttgtttctct |
39581459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 563 - 639
Target Start/End: Original strand, 39525453 - 39525529
Alignment:
| Q |
563 |
atctgatccacaattgatgaagtatgtgtcttgaggatcgtatccgagtgaggggaattgtaatgatgagaattgaa |
639 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
39525453 |
atctgatccacaactgatgaagtatatgtcttgttcatcgtatccgagcgaggggaagtataatgatgagaattgaa |
39525529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 39581850 - 39581927
Alignment:
| Q |
563 |
atctgatccacaattgatgaagtatgtgtcttgaggatcgtatccgagtgaggggaattgtaatgatgagaattgaag |
640 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||| ||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
39581850 |
atcttatccacaactgatgaagtatatgtcttggtcatcgtatccaagtgaggcgaactgtaatgatgagaattgaag |
39581927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 826 - 899
Target Start/End: Original strand, 39571647 - 39571722
Alignment:
| Q |
826 |
agataagaggaagactttagctgtggactg--gttaagtcgtcacctttgaattttcttatttcttgtttgtttct |
899 |
Q |
| |
|
||||||||||||||||| ||| ||||| || |||||||||||| ||||| |||||||| || ||||||||||||| |
|
|
| T |
39571647 |
agataagaggaagacttaagccgtggagtgtggttaagtcgtcagctttggattttcttcttccttgtttgtttct |
39571722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 117; Significance: 4e-59; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 200 - 388
Target Start/End: Complemental strand, 3331696 - 3331509
Alignment:
| Q |
200 |
gattgtgaatctttttctgatgattttaacgtaatactcttttactaaaggagagttggtggtgttttcagcgttgaaattatgtaacagaatgaaacca |
299 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||| |
|
|
| T |
3331696 |
gattgtgaatctttttatgatgattttaacgtaatactcttttactaaaggagagttggtggtgtttttagcgtcgaaattagttaacagaaggaaaccg |
3331597 |
T |
 |
| Q |
300 |
ggaactgaaacggtgaattttgcagaggaaaggttagttggtgaagagaatgaaaagaaatgaaaacgtaccatgtaagtgttgtttgg |
388 |
Q |
| |
|
| ||| |||| | |||| ||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
3331596 |
gaaacagaaatgttgaa-tttgcagtggaaaggttaattggtgaagagaatgaaaggaaatggaaacgtaccatgtaggtgttgtttgg |
3331509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 3331315 - 3331271
Alignment:
| Q |
156 |
attgcattaacaaacgcaaatgatgatgtttgaggtgtgaaagtg |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3331315 |
attgcattaacaaatgcaaatgatgatgtttgaggtgtgaaagtg |
3331271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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