View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11633_low_2 (Length: 373)

Name: NF11633_low_2
Description: NF11633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11633_low_2
NF11633_low_2
[»] chr8 (32 HSPs)
chr8 (80-339)||(25198791-25199044)
chr8 (4-91)||(25199188-25199275)
chr8 (337-373)||(45145595-45145631)
chr8 (339-373)||(4786697-4786731)
chr8 (339-373)||(19163430-19163464)
chr8 (339-373)||(33472980-33473014)
chr8 (339-373)||(38815914-38815948)
chr8 (340-373)||(5526608-5526641)
chr8 (340-373)||(38815799-38815832)
chr8 (337-373)||(5526488-5526524)
chr8 (339-371)||(40739604-40739636)
chr8 (340-372)||(42666229-42666261)
chr8 (338-373)||(8769635-8769670)
chr8 (334-373)||(28435402-28435441)
chr8 (338-373)||(40305006-40305041)
chr8 (340-370)||(7011788-7011818)
chr8 (340-373)||(1256201-1256234)
chr8 (340-373)||(4786771-4786804)
chr8 (340-373)||(7011903-7011936)
chr8 (340-373)||(11295915-11295948)
chr8 (340-373)||(27184210-27184243)
chr8 (340-373)||(29007523-29007556)
chr8 (336-373)||(42666109-42666146)
chr8 (337-373)||(3790122-3790158)
chr8 (335-371)||(8568933-8568969)
chr8 (339-371)||(13832468-13832500)
chr8 (343-371)||(27184327-27184355)
chr8 (340-368)||(32480312-32480340)
chr8 (340-368)||(34194556-34194584)
chr8 (340-368)||(34194676-34194704)
chr8 (340-368)||(37922928-37922956)
chr8 (340-368)||(38883942-38883970)
[»] chr7 (19 HSPs)
chr7 (247-321)||(19209016-19209090)
chr7 (340-373)||(2850972-2851005)
chr7 (340-373)||(10300932-10300965)
chr7 (338-373)||(25196566-25196601)
chr7 (340-371)||(34907778-34907809)
chr7 (341-371)||(23361011-23361041)
chr7 (335-369)||(25486707-25486741)
chr7 (339-373)||(27878837-27878871)
chr7 (339-373)||(32408203-32408237)
chr7 (340-373)||(2927182-2927215)
chr7 (340-373)||(6390230-6390263)
chr7 (340-373)||(16810924-16810957)
chr7 (340-373)||(20557687-20557720)
chr7 (340-373)||(27878914-27878947)
chr7 (339-368)||(27940861-27940890)
chr7 (340-373)||(48338932-48338965)
chr7 (340-368)||(27942441-27942469)
chr7 (340-368)||(28003294-28003322)
chr7 (339-371)||(34907660-34907692)
[»] chr2 (29 HSPs)
chr2 (337-373)||(21208885-21208921)
chr2 (338-373)||(6048073-6048108)
chr2 (339-373)||(7354765-7354799)
chr2 (339-373)||(7728428-7728462)
chr2 (339-373)||(33618308-33618342)
chr2 (340-373)||(18649617-18649650)
chr2 (341-373)||(42263012-42263044)
chr2 (333-368)||(43514872-43514907)
chr2 (339-373)||(33618192-33618226)
chr2 (339-373)||(44402195-44402229)
chr2 (340-373)||(3095032-3095065)
chr2 (340-373)||(4032576-4032609)
chr2 (340-373)||(7728544-7728577)
chr2 (340-373)||(14394892-14394925)
chr2 (340-373)||(18468937-18468970)
chr2 (340-373)||(18469052-18469085)
chr2 (340-373)||(18649707-18649740)
chr2 (340-373)||(21209003-21209036)
chr2 (340-373)||(22352439-22352472)
chr2 (339-368)||(24971200-24971229)
chr2 (340-373)||(27692713-27692746)
chr2 (340-373)||(32749937-32749970)
chr2 (340-373)||(38962437-38962470)
chr2 (339-368)||(40340464-40340493)
chr2 (340-373)||(44402080-44402113)
chr2 (335-371)||(11386397-11386433)
chr2 (340-368)||(26567632-26567660)
chr2 (340-368)||(40340585-40340613)
chr2 (339-371)||(40669076-40669108)
[»] chr6 (25 HSPs)
chr6 (338-373)||(383601-383636)
chr6 (335-373)||(26597276-26597314)
chr6 (340-373)||(12291056-12291089)
chr6 (336-373)||(12349807-12349844)
chr6 (340-373)||(24914336-24914369)
chr6 (337-373)||(10118729-10118765)
chr6 (338-373)||(2157668-2157703)
chr6 (338-373)||(34246238-34246273)
chr6 (335-373)||(2157546-2157584)
chr6 (337-371)||(10644257-10644291)
chr6 (339-373)||(25371115-25371149)
chr6 (340-373)||(3750197-3750230)
chr6 (340-373)||(10118614-10118647)
chr6 (339-368)||(10731468-10731497)
chr6 (340-373)||(14897043-14897076)
chr6 (340-373)||(22341958-22341991)
chr6 (340-373)||(26597161-26597194)
chr6 (340-373)||(28034011-28034044)
chr6 (340-373)||(32164968-32165001)
chr6 (335-368)||(32786232-32786265)
chr6 (339-371)||(3750314-3750346)
chr6 (340-368)||(10731589-10731617)
chr6 (340-368)||(11989258-11989286)
chr6 (345-373)||(12290946-12290974)
chr6 (345-373)||(34246134-34246162)
[»] chr5 (23 HSPs)
chr5 (338-373)||(5226013-5226048)
chr5 (339-373)||(6168674-6168708)
chr5 (339-373)||(16067184-16067218)
chr5 (340-373)||(8618393-8618426)
chr5 (336-373)||(14550143-14550180)
chr5 (337-373)||(18003850-18003886)
chr5 (338-373)||(4162797-4162832)
chr5 (340-371)||(16056741-16056772)
chr5 (338-373)||(25713972-25714007)
chr5 (340-370)||(16067069-16067099)
chr5 (338-368)||(33696771-33696801)
chr5 (340-373)||(6168790-6168823)
chr5 (336-373)||(12891280-12891317)
chr5 (340-373)||(12891399-12891432)
chr5 (339-368)||(19784639-19784668)
chr5 (340-373)||(21369269-21369302)
chr5 (340-373)||(22474049-22474082)
chr5 (340-373)||(26395264-26395297)
chr5 (340-369)||(34186351-34186380)
chr5 (340-373)||(36917233-36917266)
chr5 (340-368)||(19784530-19784558)
chr5 (340-368)||(26168304-26168332)
chr5 (339-371)||(39148571-39148603)
[»] chr3 (29 HSPs)
chr3 (330-373)||(378799-378842)
chr3 (335-368)||(8126121-8126154)
chr3 (340-373)||(42957945-42957978)
chr3 (340-373)||(48908656-48908689)
chr3 (337-373)||(378708-378744)
chr3 (340-372)||(11582745-11582777)
chr3 (337-373)||(13927388-13927424)
chr3 (337-373)||(20547869-20547905)
chr3 (339-371)||(39148802-39148834)
chr3 (340-371)||(34413234-34413265)
chr3 (340-371)||(39333403-39333434)
chr3 (338-373)||(48909145-48909180)
chr3 (339-373)||(20547788-20547822)
chr3 (339-373)||(35455558-35455592)
chr3 (339-373)||(38082625-38082659)
chr3 (339-373)||(44435285-44435319)
chr3 (339-373)||(48895627-48895661)
chr3 (340-373)||(16607465-16607498)
chr3 (339-368)||(34205558-34205587)
chr3 (340-373)||(38082510-38082543)
chr3 (340-373)||(39333286-39333319)
chr3 (340-373)||(44687896-44687929)
chr3 (340-373)||(48895496-48895529)
chr3 (339-368)||(50623152-50623181)
chr3 (335-368)||(53718013-53718046)
chr3 (336-368)||(19679078-19679110)
chr3 (340-368)||(28791759-28791787)
chr3 (336-368)||(32814744-32814776)
chr3 (341-373)||(42605991-42606023)
[»] scaffold0633 (2 HSPs)
scaffold0633 (339-373)||(5436-5470)
scaffold0633 (340-373)||(5320-5353)
[»] chr4 (32 HSPs)
chr4 (339-373)||(2994716-2994750)
chr4 (337-371)||(7695242-7695276)
chr4 (339-373)||(54927216-54927250)
chr4 (340-373)||(2994832-2994865)
chr4 (340-373)||(45861001-45861034)
chr4 (340-373)||(45861116-45861149)
chr4 (340-373)||(47628392-47628425)
chr4 (340-373)||(48796286-48796319)
chr4 (340-373)||(54677346-54677379)
chr4 (337-373)||(26651572-26651608)
chr4 (339-371)||(35207434-35207466)
chr4 (337-373)||(36235671-36235707)
chr4 (339-371)||(45070830-45070862)
chr4 (337-373)||(51545497-51545533)
chr4 (340-371)||(1945361-1945392)
chr4 (340-371)||(35207552-35207583)
chr4 (340-371)||(42545983-42546014)
chr4 (339-373)||(171123-171157)
chr4 (339-373)||(7695124-7695158)
chr4 (338-368)||(25856126-25856156)
chr4 (339-373)||(31860762-31860796)
chr4 (339-373)||(39466699-39466733)
chr4 (340-373)||(171239-171272)
chr4 (340-373)||(9011856-9011889)
chr4 (340-373)||(42911726-42911759)
chr4 (340-373)||(54927101-54927134)
chr4 (339-371)||(15133822-15133854)
chr4 (337-373)||(31860644-31860680)
chr4 (339-371)||(35967494-35967526)
chr4 (343-371)||(36235791-36235819)
chr4 (343-371)||(47628280-47628308)
chr4 (336-368)||(51975240-51975272)
[»] chr1 (48 HSPs)
chr1 (339-373)||(15998322-15998356)
chr1 (339-373)||(34662400-34662434)
chr1 (339-373)||(41649526-41649560)
chr1 (340-373)||(11994856-11994889)
chr1 (340-373)||(24286876-24286909)
chr1 (340-373)||(31414867-31414900)
chr1 (340-373)||(35838714-35838747)
chr1 (340-373)||(39151720-39151753)
chr1 (339-371)||(26040493-26040525)
chr1 (339-371)||(49980612-49980644)
chr1 (340-371)||(435202-435233)
chr1 (340-371)||(6669505-6669536)
chr1 (340-371)||(15998207-15998238)
chr1 (340-371)||(31919953-31919984)
chr1 (338-373)||(42761227-42761262)
chr1 (338-368)||(6763450-6763480)
chr1 (339-373)||(9135629-9135663)
chr1 (339-373)||(13911389-13911423)
chr1 (339-373)||(17012992-17013026)
chr1 (335-373)||(22954883-22954921)
chr1 (337-371)||(24023358-24023392)
chr1 (339-373)||(24286760-24286794)
chr1 (338-368)||(26059235-26059265)
chr1 (339-373)||(34755000-34755034)
chr1 (339-373)||(35838829-35838863)
chr1 (339-373)||(38149359-38149393)
chr1 (339-373)||(43147546-43147580)
chr1 (340-373)||(11994968-11995001)
chr1 (340-373)||(12568432-12568465)
chr1 (340-369)||(31481861-31481890)
chr1 (340-373)||(31481976-31482009)
chr1 (340-373)||(31852056-31852089)
chr1 (340-373)||(31919836-31919869)
chr1 (340-373)||(38149475-38149508)
chr1 (340-373)||(39151817-39151850)
chr1 (335-368)||(39181167-39181200)
chr1 (340-373)||(40094439-40094472)
chr1 (340-373)||(41649643-41649676)
chr1 (340-373)||(44371215-44371248)
chr1 (340-373)||(49980705-49980738)
chr1 (339-371)||(1344481-1344513)
chr1 (339-371)||(4682932-4682964)
chr1 (340-368)||(5852684-5852712)
chr1 (337-373)||(23781724-23781760)
chr1 (340-368)||(45242858-45242886)
chr1 (339-371)||(45749109-45749141)
chr1 (339-371)||(45925357-45925389)
chr1 (340-368)||(46518061-46518089)
[»] scaffold0036 (1 HSPs)
scaffold0036 (340-373)||(36406-36439)
[»] scaffold0321 (2 HSPs)
scaffold0321 (339-371)||(1628-1660)
scaffold0321 (340-371)||(1746-1777)
[»] scaffold0002 (1 HSPs)
scaffold0002 (341-373)||(491847-491879)
[»] scaffold0200 (1 HSPs)
scaffold0200 (340-373)||(22413-22446)


Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 80 - 339
Target Start/End: Complemental strand, 25199044 - 25198791
Alignment:
Q  80 atttaaaatcttattaatgtcaaatggactttttcagattaattgaagaaaaaagtgagcatactcatttgtgacttgattactatcatttttagcgctt 179  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  25199044 atttaaaatcttattagtgtcaaatggactttttcagattaattgaagaaaaa-gtgagcatactcatttgtgacttgattactatcattgttagcgctt 25198946  T
Q  180 tctaaaatttcaatttttcaataactacactaaatagtttcttcacccatatcattctcatcacattgtcctccactccttttccattaaataataaaga 279  Q
    |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  25198945 tctaaaatttcaatttttcaataacta-----aatagtttcttcacccatatcattctcatcacattttgctccactccttttccattaaataatcaaga 25198851  T
Q  280 aaaatattacaactggacatctttgtatagttataattttacacaccttcttctcaaata 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25198850 aaaatattacaactggacatctttgtatagttataattttacacaccttcttttcaaata 25198791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 25199275 - 25199188
Alignment:
Q  4 tgcgcactttaagtttattttgctacattcccatgagtggtacaaaagcaaagtcttggttgtttttaactggaaaatttaaaatctt 91  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25199275 tgcgcactttaagcttattttgctacattcccataagtggtacaaaagcaaagtcttggttgtttttaactggaaaatttaaaatctt 25199188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 45145595 - 45145631
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||||    
T  45145595 atatactccctccgtttcaaaatataagcaaaattca 45145631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 4786697 - 4786731
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  4786697 atactccctccgtttcaaaatataagcaaaattca 4786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 19163464 - 19163430
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  19163464 atactccctccgtttcaaaatataagcaaaattca 19163430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 33472980 - 33473014
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  33472980 atactccctccgtttcaaaatataagcaaaattca 33473014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 38815948 - 38815914
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  38815948 atactccctccgtttcaaaatataagcaaaattca 38815914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 5526641 - 5526608
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  5526641 tactccctccgtttcaaaatataagcaaaattca 5526608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 38815799 - 38815832
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  38815799 tactccctccgtttcaaaatataagcaaaattca 38815832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 5526488 - 5526524
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5526488 atatactccctccgtttcaaaatatatgcaaaattca 5526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 40739636 - 40739604
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  40739636 atactccctccgtttcaaaatataagcaaaatt 40739604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 42666261 - 42666229
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattc 372  Q
    |||||||||||||||||||||||||||||||||    
T  42666261 tactccctccgtttcaaaatataagcaaaattc 42666229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 8769635 - 8769670
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||| |||||||||||||||||||||||||||    
T  8769635 tatactccatccgtttcaaaatataagcaaaattca 8769670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 28435402 - 28435441
Alignment:
Q  334 caaatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  28435402 caaaaatactccctccgtgtcaaaatataagcaaaattca 28435441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 40305006 - 40305041
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||||    
T  40305006 tatactccctccgtatcaaaatataagcaaaattca 40305041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 370
Target Start/End: Original strand, 7011788 - 7011818
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaat 370  Q
    |||||||||||||||||||||||||||||||    
T  7011788 tactccctccgtttcaaaatataagcaaaat 7011818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 1256234 - 1256201
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  1256234 tactccttccgtttcaaaatataagcaaaattca 1256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 4786804 - 4786771
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  4786804 tactccatccgtttcaaaatataagcaaaattca 4786771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 7011936 - 7011903
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  7011936 tactccttccgtttcaaaatataagcaaaattca 7011903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 11295915 - 11295948
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  11295915 tactccatccgtttcaaaatataagcaaaattca 11295948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 27184210 - 27184243
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  27184210 tactccctccgtctcaaaatataagcaaaattca 27184243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 29007556 - 29007523
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  29007556 tactccctccgtatcaaaatataagcaaaattca 29007523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 42666109 - 42666146
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  42666109 aatatactccatccgtatcaaaatataagcaaaattca 42666146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 3790122 - 3790158
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| || ||||||||||||||||||    
T  3790122 atatactccctccgtatcgaaatataagcaaaattca 3790158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 8568969 - 8568933
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  8568969 aaatatactccctccgtatcaaaatataaacaaaatt 8568933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 13832468 - 13832500
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||| ||||||    
T  13832468 atactccctccgtttcaaaatataagtaaaatt 13832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 371
Target Start/End: Complemental strand, 27184355 - 27184327
Alignment:
Q  343 tccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||    
T  27184355 tccctccgtttcaaaatataagcaaaatt 27184327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 32480340 - 32480312
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  32480340 tactccctccgtttcaaaatataagcaaa 32480312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 34194556 - 34194584
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  34194556 tactccctccgtttcaaaatataagcaaa 34194584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 34194704 - 34194676
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  34194704 tactccctccgtttcaaaatataagcaaa 34194676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 37922956 - 37922928
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  37922956 tactccctccgtttcaaaatataagcaaa 37922928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 38883942 - 38883970
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  38883942 tactccctccgtttcaaaatataagcaaa 38883970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 19209090 - 19209016
Alignment:
Q  247 gtcctccactccttttccattaaataataaagaaaaatattacaactggacatctttgtatagttataattttac 321  Q
    |||||| | ||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||||    
T  19209090 gtcctctattccttttccattaaataatcaagaaaaagattacgactggacatctttgtatcgttataatgttac 19209016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 2850972 - 2851005
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  2850972 tactccctccgtttcaaaatataagcaaaattca 2851005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 10300965 - 10300932
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  10300965 tactccctccgtttcaaaatataagcaaaattca 10300932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 25196566 - 25196601
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||||    
T  25196566 tatacttcctccgtttcaaaatataagcaaaattca 25196601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Complemental strand, 34907809 - 34907778
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  34907809 tactccctccgtttcaaaatataagcaaaatt 34907778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 341 - 371
Target Start/End: Original strand, 23361011 - 23361041
Alignment:
Q  341 actccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||    
T  23361011 actccctccgtttcaaaatataagcaaaatt 23361041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 25486707 - 25486741
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaaa 369  Q
    ||||||||||||||||| |||||||||||||||||    
T  25486707 aaatatactccctccgtgtcaaaatataagcaaaa 25486741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 27878837 - 27878871
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||| |||||||||||||||||||||    
T  27878837 atactccctccgtatcaaaatataagcaaaattca 27878871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 32408237 - 32408203
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||| |||||||||||||||||||||||||    
T  32408237 atactcccttcgtttcaaaatataagcaaaattca 32408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 2927182 - 2927215
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  2927182 tactccctccgttttaaaatataagcaaaattca 2927215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 6390263 - 6390230
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| |||||||||||||||||||||||||||||    
T  6390263 tactacctccgtttcaaaatataagcaaaattca 6390230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 16810957 - 16810924
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  16810957 tactccctccgttttaaaatataagcaaaattca 16810924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 20557687 - 20557720
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||| ||||||||||||||||||||||||||||    
T  20557687 tactctctccgtttcaaaatataagcaaaattca 20557720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 27878947 - 27878914
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  27878947 tactccctccgtatcaaaatataagcaaaattca 27878914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Complemental strand, 27940890 - 27940861
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  27940890 atactccctccgtttcaaaatataagcaaa 27940861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 48338932 - 48338965
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||| ||||||||||||||||||||||||||||    
T  48338932 tactctctccgtttcaaaatataagcaaaattca 48338965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 27942469 - 27942441
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  27942469 tactccctccgtttcaaaatataagcaaa 27942441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 28003322 - 28003294
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  28003322 tactccctccgtttcaaaatataagcaaa 28003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 34907660 - 34907692
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||| ||||||    
T  34907660 atactccctccgtttcaaaatataagtaaaatt 34907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 21208885 - 21208921
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||||    
T  21208885 atatactccctccgtttcaaaatataagcaaaattca 21208921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 6048108 - 6048073
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  6048108 tatactccctccgtttcaaaatataagcaaaattca 6048073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 7354765 - 7354799
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  7354765 atactccctccgtttcaaaatataagcaaaattca 7354799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 7728428 - 7728462
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  7728428 atactccctccgtttcaaaatataagcaaaattca 7728462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 33618342 - 33618308
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  33618342 atactccctccgtttcaaaatataagcaaaattca 33618308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 18649617 - 18649650
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  18649617 tactccctccgtttcaaaatataagcaaaattca 18649650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 42263012 - 42263044
Alignment:
Q  341 actccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||    
T  42263012 actccctccgtttcaaaatataagcaaaattca 42263044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 333 - 368
Target Start/End: Complemental strand, 43514907 - 43514872
Alignment:
Q  333 tcaaatatactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||| ||||||||||||||||||||||    
T  43514907 tcaaatatactccatccgtttcaaaatataagcaaa 43514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 33618192 - 33618226
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  33618192 atactccatccgtttcaaaatataagcaaaattca 33618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 44402229 - 44402195
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  44402229 atactctctccgtttcaaaatataagcaaaattca 44402195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 3095065 - 3095032
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||| |||||||||    
T  3095065 tactccctccgtttcaaaatataatcaaaattca 3095032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 4032576 - 4032609
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||| |||||||||||||||||||||||    
T  4032576 tactccctccatttcaaaatataagcaaaattca 4032609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 7728577 - 7728544
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| |||||||||||||||||||||||||||||    
T  7728577 tacttcctccgtttcaaaatataagcaaaattca 7728544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 14394925 - 14394892
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| |||||||||||||||||||||||||||||    
T  14394925 tacttcctccgtttcaaaatataagcaaaattca 14394892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 18468937 - 18468970
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  18468937 tactccatccgtttcaaaatataagcaaaattca 18468970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 18469085 - 18469052
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  18469085 tactccatccgtttcaaaatataagcaaaattca 18469052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 18649740 - 18649707
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  18649740 tactccttccgtttcaaaatataagcaaaattca 18649707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 21209036 - 21209003
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  21209036 tactccctccgttttaaaatataagcaaaattca 21209003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 22352439 - 22352472
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  22352439 tactccatccgtttcaaaatataagcaaaattca 22352472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 24971200 - 24971229
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  24971200 atactccctccgtttcaaaatataagcaaa 24971229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 27692746 - 27692713
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  27692746 tactccatccgtttcaaaatataagcaaaattca 27692713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 32749970 - 32749937
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||| |||||||||||||||||||||||    
T  32749970 tactccctccatttcaaaatataagcaaaattca 32749937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 38962437 - 38962470
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  38962437 tactccctccgttttaaaatataagcaaaattca 38962470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 40340464 - 40340493
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  40340464 atactccctccgtttcaaaatataagcaaa 40340493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 44402080 - 44402113
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  44402080 tactccctccgtgtcaaaatataagcaaaattca 44402113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 11386433 - 11386397
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||| || |||||||||||||||||||||||    
T  11386433 aaatatactctcttcgtttcaaaatataagcaaaatt 11386397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 26567632 - 26567660
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  26567632 tactccctccgtttcaaaatataagcaaa 26567660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 40340613 - 40340585
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  40340613 tactccctccgtttcaaaatataagcaaa 40340585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 40669108 - 40669076
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||| ||||||||||||||||    
T  40669108 atactccctccgtttctaaatataagcaaaatt 40669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 383601 - 383636
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  383601 tatactccctccgtttcaaaatataagcaaaattca 383636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 26597314 - 26597276
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  26597314 aaatgtactccctccgtttcaaaatataagcaaaattca 26597276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 12291089 - 12291056
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  12291089 tactccctccgtttcaaaatataagcaaaattca 12291056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 12349807 - 12349844
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12349807 aatatactccatccgtttcaaaatataagcaaaattca 12349844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 24914336 - 24914369
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  24914336 tactccctccgtttcaaaatataagcaaaattca 24914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 10118765 - 10118729
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10118765 atataatccctccgtttcaaaatataagcaaaattca 10118729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 2157703 - 2157668
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||| |||||||||||||||||||||||||||    
T  2157703 tatactccatccgtttcaaaatataagcaaaattca 2157668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 34246273 - 34246238
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||| ||||||||    
T  34246273 tatactccctccgtttcaaaatataagtaaaattca 34246238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 2157546 - 2157584
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  2157546 aaatgtactccctccgtttcaaaatataagtaaaattca 2157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 371
Target Start/End: Original strand, 10644257 - 10644291
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||| |||||||||||||||||||    
T  10644257 atatactccctccgtatcaaaatataagcaaaatt 10644291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 25371149 - 25371115
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  25371149 atactccatccgtttcaaaatataagcaaaattca 25371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 3750197 - 3750230
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  3750197 tactccctccgtttcaaaatacaagcaaaattca 3750230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 10118614 - 10118647
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||| ||||||||||||||||||||||||||||    
T  10118614 tactctctccgtttcaaaatataagcaaaattca 10118647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 10731468 - 10731497
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  10731468 atactccctccgtttcaaaatataagcaaa 10731497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 14897043 - 14897076
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  14897043 tactccctccgtatcaaaatataagcaaaattca 14897076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 22341958 - 22341991
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  22341958 tactccctccgttttaaaatataagcaaaattca 22341991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 26597161 - 26597194
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||| |||||||||    
T  26597161 tactccctccgtttcaaaatataaacaaaattca 26597194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 28034011 - 28034044
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  28034011 tactccctccgtatcaaaatataagcaaaattca 28034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 32165001 - 32164968
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  32165001 tactccatccgtttcaaaatataagcaaaattca 32164968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 32786265 - 32786232
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaa 368  Q
    |||| |||||||||||||||||||||||||||||    
T  32786265 aaatttactccctccgtttcaaaatataagcaaa 32786232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 3750346 - 3750314
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||| |||||||||||||||||||    
T  3750346 atactccctccgtatcaaaatataagcaaaatt 3750314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 10731617 - 10731589
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  10731617 tactccctccgtttcaaaatataagcaaa 10731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 11989286 - 11989258
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  11989286 tactccctccgtttcaaaatataagcaaa 11989258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 373
Target Start/End: Original strand, 12290946 - 12290974
Alignment:
Q  345 cctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||    
T  12290946 cctccgtttcaaaatataagcaaaattca 12290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 373
Target Start/End: Original strand, 34246134 - 34246162
Alignment:
Q  345 cctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||    
T  34246134 cctccgtttcaaaatataagcaaaattca 34246162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 5226013 - 5226048
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  5226013 tatactccctccgtttcaaaatataagcaaaattca 5226048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 6168674 - 6168708
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  6168674 atactccctccgtttcaaaatataagcaaaattca 6168708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 16067218 - 16067184
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  16067218 atactccctccgtttcaaaatataagcaaaattca 16067184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 8618393 - 8618426
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  8618393 tactccctccgtttcaaaatataagcaaaattca 8618426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 14550180 - 14550143
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14550180 aatatactccctccgttttaaaatataagcaaaattca 14550143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 18003850 - 18003886
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18003850 atatactccatccgtttcaaaatataagcaaaattca 18003886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 4162797 - 4162832
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||| |||||||||||||||||||||||||||    
T  4162797 tatactccttccgtttcaaaatataagcaaaattca 4162832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Original strand, 16056741 - 16056772
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  16056741 tactccctccgtttcaaaatataagcaaaatt 16056772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 25714007 - 25713972
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| ||||||||||||||||||||||||||||    
T  25714007 tatactctctccgtttcaaaatataagcaaaattca 25713972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 370
Target Start/End: Original strand, 16067069 - 16067099
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaat 370  Q
    |||||||||||||||||||||||||||||||    
T  16067069 tactccctccgtttcaaaatataagcaaaat 16067099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 368
Target Start/End: Complemental strand, 33696801 - 33696771
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||||    
T  33696801 tatactccctccgtttcaaaatataagcaaa 33696771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 6168823 - 6168790
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  6168823 tactccatccgtttcaaaatataagcaaaattca 6168790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 12891280 - 12891317
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  12891280 aatatactcactccatttcaaaatataagcaaaattca 12891317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 12891432 - 12891399
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| |||||||||||||||||||||||||||||    
T  12891432 tacttcctccgtttcaaaatataagcaaaattca 12891399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Complemental strand, 19784668 - 19784639
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  19784668 atactccctccgtttcaaaatataagcaaa 19784639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 21369269 - 21369302
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  21369269 tactccatccgtttcaaaatataagcaaaattca 21369302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 22474082 - 22474049
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| ||||||||||||||||||    
T  22474082 tactccctccgtttctaaatataagcaaaattca 22474049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 26395297 - 26395264
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||| ||||||||    
T  26395297 tactccctccgtttcaaaatataagtaaaattca 26395264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 369
Target Start/End: Original strand, 34186351 - 34186380
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaa 369  Q
    ||||||||||||||||||||||||||||||    
T  34186351 tactccctccgtttcaaaatataagcaaaa 34186380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 36917266 - 36917233
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||| ||||||||||||    
T  36917266 tactccctccgtttcaaaatacaagcaaaattca 36917233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 19784530 - 19784558
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  19784530 tactccctccgtttcaaaatataagcaaa 19784558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 26168332 - 26168304
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  26168332 tactccctccgtttcaaaatataagcaaa 26168304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 39148603 - 39148571
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||| |||||||||||||||||    
T  39148603 atactccctccgttttaaaatataagcaaaatt 39148571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 330 - 373
Target Start/End: Complemental strand, 378842 - 378799
Alignment:
Q  330 ttctcaaatatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  378842 ttctaaaatatactccctccgttttaaaatataagcaaaattca 378799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 8126121 - 8126154
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||||||    
T  8126121 aaatatactccctccgtttcaaaatataagcaaa 8126154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 42957978 - 42957945
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  42957978 tactccctccgtttcaaaatataagcaaaattca 42957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 48908656 - 48908689
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  48908656 tactccctccgtttcaaaatataagcaaaattca 48908689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 378708 - 378744
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||| |||||||||||||||||||    
T  378708 atatactccctccgttttaaaatataagcaaaattca 378744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 11582745 - 11582777
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattc 372  Q
    |||||||||||||||||||||||||||||||||    
T  11582745 tactccctccgtttcaaaatataagcaaaattc 11582777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 13927388 - 13927424
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||| |||||||    
T  13927388 atatactccctccgtttcaaaatataagcgaaattca 13927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 20547905 - 20547869
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20547905 atatactctctccgtttcaaaatataagcaaaattca 20547869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 39148834 - 39148802
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  39148834 atactccctccgtttcaaaatataagcaaaatt 39148802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Complemental strand, 34413265 - 34413234
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  34413265 tactccctccgtttcaaaatataagcaaaatt 34413234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Complemental strand, 39333434 - 39333403
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  39333434 tactccctccgtttcaaaatataagcaaaatt 39333403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 48909180 - 48909145
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||| |||||||||||||||||||    
T  48909180 tatactccctccgttttaaaatataagcaaaattca 48909145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 20547788 - 20547822
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| |||||||||||||||||||    
T  20547788 atactccctccgttttaaaatataagcaaaattca 20547822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 35455558 - 35455592
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| |||||||||||||||||||    
T  35455558 atactccctccgttttaaaatataagcaaaattca 35455592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 38082659 - 38082625
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||| |||||||||    
T  38082659 atactccctccgtttcaaaatataaacaaaattca 38082625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 44435319 - 44435285
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  44435319 atactccctccgtttcaaaatataagcaaatttca 44435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 48895661 - 48895627
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| |||||||||||||||||||    
T  48895661 atactccctccgttttaaaatataagcaaaattca 48895627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 16607498 - 16607465
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  16607498 tactccctccgtatcaaaatataagcaaaattca 16607465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 34205558 - 34205587
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  34205558 atactccctccgtttcaaaatataagcaaa 34205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 38082510 - 38082543
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  38082510 tactccatccgtttcaaaatataagcaaaattca 38082543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 39333286 - 39333319
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  39333286 tactccctccgttttaaaatataagcaaaattca 39333319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 44687896 - 44687929
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| ||||||||||||||||||    
T  44687896 tactccctccgtttctaaatataagcaaaattca 44687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 48895496 - 48895529
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  48895496 tactccctccgttttaaaatataagcaaaattca 48895529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Complemental strand, 50623181 - 50623152
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||||||||||||||    
T  50623181 atactccctccgtttcaaaatataagcaaa 50623152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 53718046 - 53718013
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||| ||||||||||||||||||||||    
T  53718046 aaatatactccatccgtttcaaaatataagcaaa 53718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 19679110 - 19679078
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||||| |||||||||||||    
T  19679110 aatatactccctccgtttctaaatataagcaaa 19679078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 28791787 - 28791759
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  28791787 tactccctccgtttcaaaatataagcaaa 28791759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 32814776 - 32814744
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||| |||||||||||||||    
T  32814776 aatatactccctccgttccaaaatataagcaaa 32814744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 42605991 - 42606023
Alignment:
Q  341 actccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| ||||||||||||||||||    
T  42605991 actccctccgtttcgaaatataagcaaaattca 42606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 5470 - 5436
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  5470 atactccctccgtttcaaaatataagcaaaattca 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 5320 - 5353
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  5320 tactccctccgtctcaaaatataagcaaaattca 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 2994716 - 2994750
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  2994716 atactccctccgtttcaaaatataagcaaaattca 2994750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 371
Target Start/End: Complemental strand, 7695276 - 7695242
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||||    
T  7695276 atatactccctccgtttcaaaatataagcaaaatt 7695242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 54927250 - 54927216
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  54927250 atactccctccgtttcaaaatataagcaaaattca 54927216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 2994865 - 2994832
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  2994865 tactccctccgtttcaaaatataagcaaaattca 2994832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 45861001 - 45861034
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  45861001 tactccctccgtttcaaaatataagcaaaattca 45861034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 45861149 - 45861116
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  45861149 tactccctccgtttcaaaatataagcaaaattca 45861116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 47628425 - 47628392
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  47628425 tactccctccgtttcaaaatataagcaaaattca 47628392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 48796319 - 48796286
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  48796319 tactccctccgtttcaaaatataagcaaaattca 48796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 54677346 - 54677379
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  54677346 tactccctccgtttcaaaatataagcaaaattca 54677379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 26651608 - 26651572
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26651608 atatactccctccgtgtcaaaatataagcaaaattca 26651572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 35207434 - 35207466
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  35207434 atactccctccgtttcaaaatataagcaaaatt 35207466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 36235671 - 36235707
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36235671 atatactccctccatttcaaaatataagcaaaattca 36235707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 45070830 - 45070862
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  45070830 atactccctccgtttcaaaatataagcaaaatt 45070862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 51545533 - 51545497
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||| ||||||||||||||||||||    
T  51545533 atatactccctccgttccaaaatataagcaaaattca 51545497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Original strand, 1945361 - 1945392
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  1945361 tactccctccgtttcaaaatataagcaaaatt 1945392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Complemental strand, 35207583 - 35207552
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  35207583 tactccctccgtttcaaaatataagcaaaatt 35207552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Original strand, 42545983 - 42546014
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  42545983 tactccctccgtttcaaaatataagcaaaatt 42546014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 171123 - 171157
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||| ||||||||||||||||||||||||    
T  171123 atactccctctgtttcaaaatataagcaaaattca 171157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 7695124 - 7695158
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  7695124 atactccatccgtttcaaaatataagcaaaattca 7695158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 368
Target Start/End: Complemental strand, 25856156 - 25856126
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||||    
T  25856156 tatactccctccgtttcaaaatataagcaaa 25856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 31860796 - 31860762
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||| |||||||||    
T  31860796 atactccctccgtttcaaaatataaccaaaattca 31860762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 39466699 - 39466733
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||| |||||||||||||||||||||    
T  39466699 atactccctccgtatcaaaatataagcaaaattca 39466733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 171272 - 171239
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  171272 tactccctccgtctcaaaatataagcaaaattca 171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 9011889 - 9011856
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  9011889 tactccctccgttttaaaatataagcaaaattca 9011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 42911759 - 42911726
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  42911759 tactccctccgtctcaaaatataagcaaaattca 42911726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 54927101 - 54927134
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||| ||||||||||||||||||||||||    
T  54927101 tactccctctgtttcaaaatataagcaaaattca 54927134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 15133822 - 15133854
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||| |||||||||||||||||||||||||||    
T  15133822 atacttcctccgtttcaaaatataagcaaaatt 15133854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 31860644 - 31860680
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||  |||||||||||||||||||||||||||    
T  31860644 atatactcattccgtttcaaaatataagcaaaattca 31860680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 35967526 - 35967494
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||| ||||||||||||||||    
T  35967526 atactccctccgtttctaaatataagcaaaatt 35967494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 371
Target Start/End: Complemental strand, 36235819 - 36235791
Alignment:
Q  343 tccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||    
T  36235819 tccctccgtttcaaaatataagcaaaatt 36235791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 371
Target Start/End: Original strand, 47628280 - 47628308
Alignment:
Q  343 tccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||    
T  47628280 tccctccgtttcaaaatataagcaaaatt 47628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 51975272 - 51975240
Alignment:
Q  336 aatatactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||| ||||||||||||||    
T  51975272 aatatactccctccgttttaaaatataagcaaa 51975240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 15998356 - 15998322
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  15998356 atactccctccgtttcaaaatataagcaaaattca 15998322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 34662400 - 34662434
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  34662400 atactccctccgtttcaaaatataagcaaaattca 34662434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 41649526 - 41649560
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||||    
T  41649526 atactccctccgtttcaaaatataagcaaaattca 41649560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 11994856 - 11994889
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  11994856 tactccctccgtttcaaaatataagcaaaattca 11994889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 24286909 - 24286876
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  24286909 tactccctccgtttcaaaatataagcaaaattca 24286876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 31414900 - 31414867
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  31414900 tactccctccgtttcaaaatataagcaaaattca 31414867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 35838714 - 35838747
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  35838714 tactccctccgtttcaaaatataagcaaaattca 35838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 39151720 - 39151753
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  39151720 tactccctccgtttcaaaatataagcaaaattca 39151753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 26040525 - 26040493
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  26040525 atactccctccgtttcaaaatataagcaaaatt 26040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 49980612 - 49980644
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  49980612 atactccctccgtttcaaaatataagcaaaatt 49980644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Original strand, 435202 - 435233
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  435202 tactccctccgtttcaaaatataagcaaaatt 435233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Original strand, 6669505 - 6669536
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  6669505 tactccctccgtttcaaaatataagcaaaatt 6669536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Original strand, 15998207 - 15998238
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  15998207 tactccctccgtttcaaaatataagcaaaatt 15998238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Complemental strand, 31919984 - 31919953
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  31919984 tactccctccgtttcaaaatataagcaaaatt 31919953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 42761227 - 42761262
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||| |||||||||||||||||||||||||    
T  42761227 tatactccctacgtttcaaaatataagcaaaattca 42761262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 368
Target Start/End: Complemental strand, 6763480 - 6763450
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||||    
T  6763480 tatactccctccgtttcaaaatataagcaaa 6763450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 9135663 - 9135629
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||| |||||||||||||||||||||    
T  9135663 atactccctccgtatcaaaatataagcaaaattca 9135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 13911423 - 13911389
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  13911423 atactccatccgtttcaaaatataagcaaaattca 13911389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 17013026 - 17012992
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  17013026 atactccgtccgtttcaaaatataagcaaaattca 17012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 22954921 - 22954883
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  22954921 aaatatactccctccgtgttaaaatataagcaaaattca 22954883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 371
Target Start/End: Original strand, 24023358 - 24023392
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||| ||||||||||||||||    
T  24023358 atatactccctccgtttctaaatataagcaaaatt 24023392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 24286760 - 24286794
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  24286760 atactccatccgtttcaaaatataagcaaaattca 24286794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 368
Target Start/End: Complemental strand, 26059265 - 26059235
Alignment:
Q  338 tatactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||||    
T  26059265 tatactccctccgtttcaaaatataagcaaa 26059235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 34755000 - 34755034
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||| |||||||||    
T  34755000 atactccctccgtttcaaaatataaacaaaattca 34755034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 35838863 - 35838829
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  35838863 atactccatccgtttcaaaatataagcaaaattca 35838829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 38149359 - 38149393
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||| |||||||||||||||||||||||||||    
T  38149359 atactccttccgtttcaaaatataagcaaaattca 38149393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 43147580 - 43147546
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| |||||||||||||||||||    
T  43147580 atactccctccgttttaaaatataagcaaaattca 43147546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 11995001 - 11994968
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||| |||||||||    
T  11995001 tactccctccgtttcaaaatataaacaaaattca 11994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 12568432 - 12568465
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  12568432 tactccctccgttttaaaatataagcaaaattca 12568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 369
Target Start/End: Original strand, 31481861 - 31481890
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaa 369  Q
    ||||||||||||||||||||||||||||||    
T  31481861 tactccctccgtttcaaaatataagcaaaa 31481890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 31482009 - 31481976
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||| |||||||||||||||||||||||||||||    
T  31482009 tactacctccgtttcaaaatataagcaaaattca 31481976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 31852056 - 31852089
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  31852056 tactccctccgtctcaaaatataagcaaaattca 31852089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 31919836 - 31919869
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  31919836 tactccctccgttttaaaatataagcaaaattca 31919869  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 38149508 - 38149475
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||| |||||||||||||||||||    
T  38149508 tactccctccgttttaaaatataagcaaaattca 38149475  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 39151850 - 39151817
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||| ||||||||||||||||||||||||||||    
T  39151850 tactctctccgtttcaaaatataagcaaaattca 39151817  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 39181200 - 39181167
Alignment:
Q  335 aaatatactccctccgtttcaaaatataagcaaa 368  Q
    ||||||||||||||||| ||||||||||||||||    
T  39181200 aaatatactccctccgtatcaaaatataagcaaa 39181167  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 40094472 - 40094439
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| ||||||||||||||||||    
T  40094472 tactccctccgtttctaaatataagcaaaattca 40094439  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 41649676 - 41649643
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  41649676 tactccctccgtctcaaaatataagcaaaattca 41649643  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 44371215 - 44371248
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  44371215 tactccctccgtctcaaaatataagcaaaattca 44371248  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 49980738 - 49980705
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||| |||||||||||||||||||||||||||    
T  49980738 tactccatccgtttcaaaatataagcaaaattca 49980705  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 1344513 - 1344481
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||| |||||||||||||||||    
T  1344513 atactccctccgttttaaaatataagcaaaatt 1344481  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 4682932 - 4682964
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||| |||||||||||||||||||    
T  4682932 atactccctccgtatcaaaatataagcaaaatt 4682964  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 5852684 - 5852712
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  5852684 tactccctccgtttcaaaatataagcaaa 5852712  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 23781760 - 23781724
Alignment:
Q  337 atatactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||| || ||||||||||||||||||    
T  23781760 atatactccctccgtatcgaaatataagcaaaattca 23781724  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 45242886 - 45242858
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  45242886 tactccctccgtttcaaaatataagcaaa 45242858  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 45749141 - 45749109
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||| ||||||||||||||||||||||    
T  45749141 atactccctctgtttcaaaatataagcaaaatt 45749109  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 45925389 - 45925357
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||| |||||||||||||||||||    
T  45925389 atactccctccgtatcaaaatataagcaaaatt 45925357  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 46518089 - 46518061
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaa 368  Q
    |||||||||||||||||||||||||||||    
T  46518089 tactccctccgtttcaaaatataagcaaa 46518061  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 36406 - 36439
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    ||||||||||||||||||||||||||||||||||    
T  36406 tactccctccgtttcaaaatataagcaaaattca 36439  T

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Target: scaffold0321 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 1628 - 1660
Alignment:
Q  339 atactccctccgtttcaaaatataagcaaaatt 371  Q
    |||||||||||||||||||||||||||||||||    
T  1628 atactccctccgtttcaaaatataagcaaaatt 1660  T

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Target: scaffold0321; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 371
Target Start/End: Complemental strand, 1777 - 1746
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaatt 371  Q
    ||||||||||||||||||||||||||||||||    
T  1777 tactccctccgtttcaaaatataagcaaaatt 1746  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 491847 - 491879
Alignment:
Q  341 actccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||||||||||||||||||||||||    
T  491847 actccctccgtttcaaaatataagcaaaattca 491879  T

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Target: scaffold0200 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 22446 - 22413
Alignment:
Q  340 tactccctccgtttcaaaatataagcaaaattca 373  Q
    |||||||||||| |||||||||||||||||||||    
T  22446 tactccctccgtatcaaaatataagcaaaattca 22413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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