View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11634_high_18 (Length: 277)
Name: NF11634_high_18
Description: NF11634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11634_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 7906580 - 7906840
Alignment:
| Q |
1 |
aagaaacaagccacgattgaacgagattgttacacctctcccaaacatcgtaattcagatcatcaggaggtaagacaccgatcgttccatcaacgaaacg |
100 |
Q |
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| T |
7906580 |
aagaaacaagccacgattgaacgagattgttacacagctcccaaacatcgtaattcagatcatcaggaggtaagataccgatcgttccatcaacgaaatg |
7906679 |
T |
|
| Q |
101 |
gaatttgttattgagaatcaacacgcgtttcatcgaccgtgcccaaacatgatagtttgaatcggtgagaagtggtgtgatggtaaccgatgtaggactt |
200 |
Q |
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||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
7906680 |
gaatttgttcttgagaatcaacacgcttttcatcgaccgtgcccaaacataatagtttgaatcggtgagaagtggtgtgatagtaaccgatgtaggactt |
7906779 |
T |
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| Q |
201 |
ccacttggatgaatgtaggatggtctcgcttgcaattctgagatctgattcgccatcaatg |
261 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
7906780 |
ccacttggatgaatgtaggatggactcgcttgcaattctgagatctgattcgccatcaatg |
7906840 |
T |
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