View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11635_high_2 (Length: 745)
Name: NF11635_high_2
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_high_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 464; Significance: 0; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 59 - 730
Target Start/End: Original strand, 3816415 - 3817088
Alignment:
| Q |
59 |
taatttggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaa |
158 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || |||||| |
|
|
| T |
3816415 |
taatttggaagataaatatccaattacctgcactccacaccaaagcttttccactagactatctgacaagtccaatataacaagattctttgcagaaaac |
3816514 |
T |
|
| Q |
159 |
ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga--caatc-aaaacctt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| |
|
|
| T |
3816515 |
ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaaaacaaatcaaaaacctt |
3816614 |
T |
|
| Q |
256 |
ccataccaagaaaatac-aaaaaccgcaggttggtcatcttatc-aaatacatgacggcttaactttagctccctcattgttggcaaacttatgcttcta |
353 |
Q |
| |
|
| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3816615 |
ctataccaccaaaatacaaaaaaccgcaggttggtcatcttatcaaaatacatgacggcttaacttcagctccctcattgttggcaaacttatgcttcta |
3816714 |
T |
|
| Q |
354 |
atagcattggtaacctgcagtcatgaaagtaaaataaaacattaaaatctttgaaaggcacatttttaaccaacatgacaaatattaatctaaaaatgac |
453 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
3816715 |
atagcattggtaccctgcaatcatgaaagtaaaataaaacattaaaatctttgaaaggcacatttttaatcgacatgacaaatattaatctaaaaatgac |
3816814 |
T |
|
| Q |
454 |
atattttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaacta |
553 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || || ||||||||||| ||||| | |
|
|
| T |
3816815 |
atattttttaccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgttttccaagg---tcactagattcttgccgaacaa |
3816911 |
T |
|
| Q |
554 |
cctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagc |
653 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
3816912 |
tctcccaacccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagc |
3817011 |
T |
|
| Q |
654 |
cactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||| |||||||||| | | |||||||||||||| || | |||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
3817012 |
cacgtaattatcactatcacaatctttcaataaatgtttcatgtaatccactttcaaatccaacccattgaagaaac |
3817088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 59 - 730
Target Start/End: Original strand, 3808839 - 3809505
Alignment:
| Q |
59 |
taatttggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaa |
158 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||| |||||||||||| | | ||||| |||||| |||||||||||||||||||| |||||| |
|
|
| T |
3808839 |
taatttggaagacacgtatccaattacctgcactccacgccaaagcttttccattttactatcatacaagttcaatataacaagattctctgcagaaaag |
3808938 |
T |
|
| Q |
159 |
ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttcca |
258 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||||||||| ||| | | |||||||||||||| || |||||||||||||| |||| || | |
|
|
| T |
3808939 |
ttctctgggaatgattttagaggacaatacatccaatgaagatatcttagattagttggaaaagattgaaacctttgaggaagacaattgaaactatcta |
3809038 |
T |
|
| Q |
259 |
taccaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaaacttatgcttctaatagc |
358 |
Q |
| |
|
|| || |||||||||||| || || ||||||||||||||||||||| || ||||||||| |||| |||||||||| ||| |||||||||||| |||| |
|
|
| T |
3809039 |
tatcaccaaaatacaaaaatcgaagtttggtcatcttatcaaatacacgagggcttaactcgagcttcctcattgttcgcagacttatgcttcttataga |
3809138 |
T |
|
| Q |
359 |
attggtaacctgcagtcatgaaagtaaaataaaacattaaaatctttgaaaggcacatttttaaccaacatgacaaatattaatctaaaaatgacatatt |
458 |
Q |
| |
|
|| ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||| | |
|
|
| T |
3809139 |
atcagtaccctg---tcatgaaagtaaaataaaacattaaaatctttgaaaggcacctttttaac-aacatgacaaatgtta-tctaaaaatgacatact |
3809233 |
T |
|
| Q |
459 |
ttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcc |
558 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3809234 |
ttttaccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcc |
3809333 |
T |
|
| Q |
559 |
cgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagccactg |
658 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3809334 |
cgacccatttcttgtagaatgtcatgcatagatataacattatattcagaaatagttataagagctttgtctttcaagctttctaacccagcagccactg |
3809433 |
T |
|
| Q |
659 |
aattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
3809434 |
aattatcactgttagaatctttcaataaaagtgttatgtaacccactctcaaactcaacccattgaagaaac |
3809505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 74 - 730
Target Start/End: Original strand, 3985821 - 3986487
Alignment:
| Q |
74 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
173 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| | ||| ||||| |||||||||||||||||||| ||||||| |||||| |||| ||| ||||| |
|
|
| T |
3985821 |
atattcaattacctgtactccacaccaaagcttttctactaggctatacgacaagtccaatataacaagtttctctgcagaaaacttctttggcaatgac |
3985920 |
T |
|
| Q |
174 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttc---------cataccaa |
264 |
Q |
| |
|
| ||||||| | | | ||||||||||||| ||| | || |||||||| ||||||||||||||||||| ||| |||| || | |||| |
|
|
| T |
3985921 |
tctagagggtaatgtacccaatgaagatatcttagatcagttggaaaaggttgaagcccttgaggaagaagatccaaacaatcatgattgtacccaccat |
3986020 |
T |
|
| Q |
265 |
gaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaa------acttatgcttctaatagc |
358 |
Q |
| |
|
||||| |||||| |||||| ||||||||| ||||||||| | |||||||||| |||| ||| |||| || ||| || ||||||||||||||| |
|
|
| T |
3986021 |
aaaaatccaaaaatttcaggttcgtcatcttagcaaatacatcagggcttaacttcagcttcctaattgctgacaagtttagacatatgcttctaatagc |
3986120 |
T |
|
| Q |
359 |
attggtaacctgcagtcatgaaagtaaaataaaacattaaaatctttgaaaggcacatttttaaccaacatgacaaatattaatctaaaaatgacatatt |
458 |
Q |
| |
|
|| ||| |||| ||||||| | |||| |||| |||| || ||||||| |||||||| |||||| || |||||| ||| | |||| ||| ||||| |
|
|
| T |
3986121 |
atcagtaccctg---tcatgaatggaaaagaaaattctaaa-tcattgaaagacacattttaaaccaaaataacaaatgtta-tgtaaagatgctatatt |
3986215 |
T |
|
| Q |
459 |
ttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcc |
558 |
Q |
| |
|
|| ||||||||||||||| || ||||| |||||||||| ||| |||||||||||||||||| | |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
3986216 |
ttataccttgtcattttttaagacatcgcaaatttcatcatgatcccataatcgactgcgtttgtttgggtattcactagattcttggcgaacaacctcc |
3986315 |
T |
|
| Q |
559 |
cgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagccactg |
658 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||| |||| ||||||||| |
|
|
| T |
3986316 |
cgacccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttatgagagctttatctttcaacctttctatcccaacagccactg |
3986415 |
T |
|
| Q |
659 |
aattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||||||| | | ||||||||||||||||| | |||||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
3986416 |
aattatcaccttcacaatctttcaataaaagtttcatgtaatccactttcaaactcaacccattgaagaaac |
3986487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 460 - 730
Target Start/End: Complemental strand, 3920646 - 3920376
Alignment:
| Q |
460 |
tttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctccc |
559 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3920646 |
tttaccttgtcatttttcaatacatcacaaatgtcatcaacatcccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctccc |
3920547 |
T |
|
| Q |
560 |
gacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagccactga |
659 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| | |
|
|
| T |
3920546 |
gacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaagctttctaacccaccagccacgta |
3920447 |
T |
|
| Q |
660 |
attatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||||||| | | |||||||||||||| || | |||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
3920446 |
attatcactatcacaatctttcaataaatgtttcatgtaatccactttcaaattcaacccattgaagaaac |
3920376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 135 - 730
Target Start/End: Original strand, 3800482 - 3801078
Alignment:
| Q |
135 |
ataacaagattctctgaagaaaaattctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagccctt |
234 |
Q |
| |
|
||||||||||||| || |||||| |||||||||||||||||||||||| | | |||||||||||||| ||| | || |||||||||||||||||||| |
|
|
| T |
3800482 |
ataacaagattctttgcagaaaacttctctgggaatgattttagagggtaatgcatccaatgaagatatcttagatcatttggaaaagattgaagccctt |
3800581 |
T |
|
| Q |
235 |
gaggaagacaatcaaaaccttccataccaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgt |
334 |
Q |
| |
|
|||||||| || ||| | | ||||| |||||| |||| | |||| ||||||||||||| ||||||||||| |||||||||| |||| ||| | || |
|
|
| T |
3800582 |
gaggaagaagttccaaatcgtatttaccatgaaaatccaaatatcgcaagttggtcatcttagcaaatacatgagggcttaacttcagcttcctaaatga |
3800681 |
T |
|
| Q |
335 |
tggcaa------acttatgcttctaatagcattggtaacctgcagtcatgaaagtaaaataaaacattaaaatctttgaaaggcacatttttaaccaaca |
428 |
Q |
| |
|
|| ||| || ||||||||||||||||| ||| ||| | ||| || |||||| |||| ||| |||| ||||||| || |||||||||||| | |
|
|
| T |
3800682 |
tgacaagtctacacgtatgcttctaatagcatcagtaccctac---cattaacgtaaaagaaaa-atttcaatcattgaaagccatatttttaaccaaaa |
3800777 |
T |
|
| Q |
429 |
tgacaaatattaatctaaaaatgaca--tattttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcag |
526 |
Q |
| |
|
| ||| || ||| ||| ||| | || |||||||||||||||||||||||||||||||||| || ||| |||| |||||| |||||| |||| || |
|
|
| T |
3800778 |
taacatatgtta-tctgaaatagccaaatattttttaccttgtcatttttcaatacatcatagataatatcaggatcccataaatgactgcattttctag |
3800876 |
T |
|
| Q |
527 |
ggtgttctctagattcttggcgaactacctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagcttt |
626 |
Q |
| |
|
||| ||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3800877 |
ggtcttcactatattcttggcgaacaacctcccgacccatttctcatagaatgtcatgcatagatataacattatc--gagaaatagttataagagcttt |
3800974 |
T |
|
| Q |
627 |
gtctttcaagctttctaacccagcagccactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaag |
726 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||||||||| | | ||||||||| ||||| | | |||||| ||| |||||||||||||||||||||| |
|
|
| T |
3800975 |
atcttttaacctttctaacccaacagccactgaattatcactttcacaatctttcagtaaaattttcatgtaatccactttcaaattcaacccattgaag |
3801074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 74 - 730
Target Start/End: Original strand, 4001127 - 4001796
Alignment:
| Q |
74 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
173 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||| | | |||||| ||| |||||||||||||||||||||| | |||||| |||| |||||||||| |
|
|
| T |
4001127 |
atattcaattacctgcactccacaccaaagattttccactcgactatgtgaaaagtccaatataacaagattctttccagaaaacttctttgggaatgat |
4001226 |
T |
|
| Q |
174 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaataca |
273 |
Q |
| |
|
||||||||| | | | ||||| || |||| ||| | || ||| |||||||||||||||||||||||| || ||| | | |||||| |||| || |
|
|
| T |
4001227 |
tttagagggtaatgtatccaacaaatatatcttagatcagttgggaaagattgaagcccttgaggaagaagttccaaatcgtatttaccaatgaaatcca |
4001326 |
T |
|
| Q |
274 |
aaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaa------acttatgcttctaatagcattggtaac |
367 |
Q |
| |
|
|| | |||||||||||||||||| ||||||||||| |||||||||| |||| ||| | || || ||| || ||||||||||||||||| ||| | |
|
|
| T |
4001327 |
aatatcgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctaaatgatgacaagtctacacgtatgcttctaatagcatcagtacc |
4001426 |
T |
|
| Q |
368 |
ctgcagtcatgaaagtaaaataaaacatta-aaatctttgaaaggcacatttttaaccaacatgacaaatatt------aa---tctaaaaatgacat-- |
455 |
Q |
| |
|
|| | ||| || |||||| |||| |||| ||||| ||||||| || |||||||||||| |||||| || || || |||||||| | ||| |
|
|
| T |
4001427 |
ctac---cattaatgtaaaagaaaa-attacaaatcattgaaagccatatttttaaccaaaatgacatatgtttctaaaaagtttctaaaaacgccatta |
4001522 |
T |
|
| Q |
456 |
-attttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactac |
554 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||| |||| |||||| ||||| ||||| ||||| ||| ||||||||||||||||| || |
|
|
| T |
4001523 |
tattttttaccttgtcatttttcaatacatagcaaatgtcatcaggatcccataaccgacttcgtttactagggtcttcactagattcttggcgaacaac |
4001622 |
T |
|
| Q |
555 |
ctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagcc |
654 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||| |||||||| ||| || || |
|
|
| T |
4001623 |
ctcccgacccatttcttgtaaaatgtcatgcatagatacaacattatatttcgaaatagttataagagctttatctttcaacctttctaaaccaacaacc |
4001722 |
T |
|
| Q |
655 |
actgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
|||||||| ||||| | || ||| | |||| | || | |||||| ||| ||||||||||||||| |||||||||| |
|
|
| T |
4001723 |
actgaattgtcactttcag--tctcttaatagatgtttcatgtaatccactttcaaattcaacccgttgaagaaac |
4001796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 460 - 730
Target Start/End: Original strand, 4024454 - 4024724
Alignment:
| Q |
460 |
tttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctccc |
559 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| ||||| ||| ||||||||||||||||||| ||||| | | ||||||||||||||||| ||||||| |
|
|
| T |
4024454 |
tttaccttgtcattttccaatacatcacaaatgtcatcatgatcccataatcgactgcgttttctagggtctgcactagattcttggcgaacaacctccc |
4024553 |
T |
|
| Q |
560 |
gacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagccactga |
659 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||| |||||||| ||| |||||||||| |
|
|
| T |
4024554 |
gacccatttcttgtagaatgtcatgcatagatataatattatcttcagaaatagttataagagctttatctctcaacctttctaaaccaacagccactga |
4024653 |
T |
|
| Q |
660 |
attatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
|||||| || | | ||||||||||||||||| | |||||| ||| ||||||||||||||| |||||||||| |
|
|
| T |
4024654 |
attatcgctttcacaatctttcaataaaagtttcatgtaatccactttcaaattcaacccgttgaagaaac |
4024724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 74 - 730
Target Start/End: Original strand, 4217452 - 4218132
Alignment:
| Q |
74 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
173 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| | | |||||| ||||| |||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
4217452 |
atattcaattacctgtactccacaccaaagcttttccactttactataacgcaagttcaatataacaagattctctgcagaaaagttctctgggaatgat |
4217551 |
T |
|
| Q |
174 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccata---------ccaa |
264 |
Q |
| |
|
||||||||| | || |||| |||||||| ||| | || ||||||||||||||||||| |||||||| ||| |||| || || |||| |
|
|
| T |
4217552 |
tttagagggtaacatacccaacgaagatatcttagatcatttggaaaagattgaagccctcgaggaagaagatccaaacagtcattatcgtacccaccaa |
4217651 |
T |
|
| Q |
265 |
gaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaa------acttatgcttctaatagc |
358 |
Q |
| |
|
||||| |||||| |||||||||||||||| ||||||||||| |||||||||| ||| || | || || ||| || ||||||||||||||| |
|
|
| T |
4217652 |
aaaaattcaaaaatttcaggttggtcatcttagcaaatacatgagggcttaacttcagcatccaaactgatgacaagtttacacgtatgcttctaatagc |
4217751 |
T |
|
| Q |
359 |
attggtaacctgcagtcatgaaagtaaaataaaacatta-aaatctttgaaaggcacatttttaaccaacatgacaaatat---taa------tctaaaa |
448 |
Q |
| |
|
|| ||| ||| | ||| || |||||| |||| |||| ||||| ||||||| || |||| ||||||| |||||| || | ||| ||||||| |
|
|
| T |
4217752 |
atcagtaccctac---cattaatgtaaaagaaaa-attacaaatcattgaaagccaaatttgtaaccaaaatgacatatgtttctaaaaagtttctaaaa |
4217847 |
T |
|
| Q |
449 |
atgaca---tattttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttg |
545 |
Q |
| |
|
| | || ||||||||||||||||||||| |||||||| |||| ||||| |||| |||||| ||||| |||| ||||| || |||||||| | |
|
|
| T |
4217848 |
acgccattatattttttaccttgtcattttccaatacatagcaaatgtcatcaggatcccataaccgactttgtttactagggtctttaatagattctag |
4217947 |
T |
|
| Q |
546 |
gcgaactacctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaac |
645 |
Q |
| |
|
|||||| |||||||||||||| | |||| ||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||| ||||||||| |
|
|
| T |
4217948 |
gcgaacaacctcccgacccatcttttgttgaaagtcatgcatagatattacattatcttcagaaatagtaataagagctttatctttcaacctttctaac |
4218047 |
T |
|
| Q |
646 |
ccagcagccactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||| | ||||||||||||||||| | | ||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
4218048 |
ccaacggccactgaattatcactttcataatctttcaataaaagtttcatgtaatccactttcaaattcaacccattgaagaaac |
4218132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 454 - 730
Target Start/End: Complemental strand, 3956396 - 3956120
Alignment:
| Q |
454 |
atattttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaacta |
553 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||| |||| ||||| ||| || |||||||||||||| | |
|
|
| T |
3956396 |
atattttttaccttgtcatttttcaatacatcatagataatatcaggattggataatcgactgcattttctagggtcttcactggattcttggcgaacaa |
3956297 |
T |
|
| Q |
554 |
cctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagc |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||| |||||||| |||||||| ||| |||| |
|
|
| T |
3956296 |
cctcccgacccatttcttgtagaatgtcatgcatggatataacattatcttcagaaattgttataagagatttatctttcaacctttctaaaccaacagc |
3956197 |
T |
|
| Q |
654 |
cactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||| ||||||||| | | ||||||||||||||||| | |||||| ||| |||||| ||||||| |||||||||| |
|
|
| T |
3956196 |
cactgcattatcactttcaaaatctttcaataaaagtttcatgtaatccactttcaacctcaacccgttgaagaaac |
3956120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 460 - 730
Target Start/End: Complemental strand, 3933867 - 3933600
Alignment:
| Q |
460 |
tttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctccc |
559 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||| || |||||||||||||| |||| || ||| | ||||||||||| ||||| ||||||| |
|
|
| T |
3933867 |
tttaccttgtcatttttcaatacatcaaaaatgtcatcaacatcccataatcgactgcattttccaaggt---cactagattcttgccgaacaacctccc |
3933771 |
T |
|
| Q |
560 |
gacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagccactga |
659 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||| | |
|
|
| T |
3933770 |
aacccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagccacgta |
3933671 |
T |
|
| Q |
660 |
attatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||||||| | | |||||||||||||| || | |||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
3933670 |
attatcactatcacaatctttcaataaatgtttcatgtaatccaattccaaatccaacccattgaagaaac |
3933600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 454 - 730
Target Start/End: Original strand, 4009212 - 4009488
Alignment:
| Q |
454 |
atattttttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaacta |
553 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| || ||| |||| ||||| | |||||| |||| ||| | ||| |||||||||| ||||| | |
|
|
| T |
4009212 |
atatattttaccttgtcgtttttcaatacatcatagataatatcaggatcccatagttgactgcattttataggatcttcactagattcttaacgaacaa |
4009311 |
T |
|
| Q |
554 |
cctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagc |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||||| || |||||||||||| ||| |
|
|
| T |
4009312 |
cctcccgacccatttcttgtagaatgtcatgcatagatattacattatcttcagaaattgttataagagctttatcttttaacctttctaacccaatagc |
4009411 |
T |
|
| Q |
654 |
cactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||| ||||||||| | | ||||||||||||||||| | ||| || ||| |||||| ||||||| |||||||||| |
|
|
| T |
4009412 |
cactgcattatcactttcaaaatctttcaataaaagtttcatgcaatccactttcaacctcaacccgttgaagaaac |
4009488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 79 - 319
Target Start/End: Complemental strand, 3956760 - 3956520
Alignment:
| Q |
79 |
caattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgattttag |
178 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| | ||| ||| ||||| ||||||||||||||||||||||| |||||| ||||||| || ||||||||| |
|
|
| T |
3956760 |
caattatctgcactccacaccaaagtttttccagtaggctacctgacaggtccaatataacaagattctctgcagaaaacttctctgagagtgattttag |
3956661 |
T |
|
| Q |
179 |
agggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaatacaaaaac |
278 |
Q |
| |
|
|||| | || |||||||||||||||||| | || |||||||||||||| ||||| ||||| || ||| ||||| || || || |||||| ||||||| |
|
|
| T |
3956660 |
agggtaacatatccaatgaagatattttagatcagttggaaaagattgaatcccttcaggaatacgatccaaaccatctatgtcacgaaaatccaaaaac |
3956561 |
T |
|
| Q |
279 |
cgcaggttggtcatcttatcaaatacatgacggcttaactt |
319 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3956560 |
tgcaggttggtcatcttatcaaatacattggggcttaactt |
3956520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 4024013 - 4024189
Alignment:
| Q |
66 |
gaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctg |
165 |
Q |
| |
|
||||| |||||| || |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
4024013 |
gaagagaaatattcacttacctgcactccacaccaaagcttttccactagactatctgacaagtccaatataacaagattctttgcagaaaacttctctg |
4024112 |
T |
|
| Q |
166 |
ggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga |
242 |
Q |
| |
|
||||||||||||||||| | | ||||| ||||||| ||| | || |||||||||||||||||||||||||||| |
|
|
| T |
4024113 |
ggaatgattttagagggtaattcatccaagaaagatatcttagatcagttggaaaagattgaagcccttgaggaaga |
4024189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 460 - 730
Target Start/End: Complemental strand, 3964166 - 3963899
Alignment:
| Q |
460 |
tttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctccc |
559 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| ||||| || |||||||||||| || || |||||| | | || |||||||||||||| | ||||| |
|
|
| T |
3964166 |
tttaccttgtcattttttaatacttcataaatgtcatc---atcccataatcgactacggcttccagggtctccacttgattcttggcgaacaatctccc |
3964070 |
T |
|
| Q |
560 |
gacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagctttctaacccagcagccactga |
659 |
Q |
| |
|
|||||| ||||||| ||| ||||||||||||||||||||| |||||||| || | |||| |||| |||||||| |||||||||||| || ||||| |
|
|
| T |
3964069 |
tacccatgtcttgtataattccatgcatagatataacattatgtttagaaacagaaacaagatctttatctttcaacctttctaacccactggctactga |
3963970 |
T |
|
| Q |
660 |
attatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||||||| | |||||||||| | || ||| ||| ||| ||| |||||||||| |||||||||| |||| |
|
|
| T |
3963969 |
attatcactttcagaatctttccacaatagttttaggtagtccactttcaaattcgacccattgaaaaaac |
3963899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 538 - 730
Target Start/End: Original strand, 4018017 - 4018209
Alignment:
| Q |
538 |
gattcttggcgaactacctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtctttcaagc |
637 |
Q |
| |
|
|||||||||||||| | |||| |||||||||||||| |||||||||||| |||||||||||||||||||||| || ||||||| |||| |||||||| | |
|
|
| T |
4018017 |
gattcttggcgaacaatttccctacccatttcttgtataatgtcatgcatggatataacattatctttagaaaaagatataagacctttatctttcaacc |
4018116 |
T |
|
| Q |
638 |
tttctaacccagcagccactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaattcaacccattgaagaaac |
730 |
Q |
| |
|
||||||||||| || |||||||||||||| | |||||||||||| |||| | ||||||| ||| ||||||||| | |||||||| |||| |
|
|
| T |
4018117 |
tttctaacccactggctactgaattatcactttcagaatctttcaacaaaaattttatgtagtccactttcaaatttgatccattgaaaaaac |
4018209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 324
Target Start/End: Complemental strand, 3934252 - 3933996
Alignment:
| Q |
74 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
173 |
Q |
| |
|
|||| |||||||||| ||||||||||| |||||||| | | ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
3934252 |
atattcaattacctgtactccacaccatagcttttccattcgactaagatacaagtccaatataacaagattctctgcagaaaacttctctgggaatgat |
3934153 |
T |
|
| Q |
174 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaa---ccttccataccaa---gaa |
267 |
Q |
| |
|
||||||||| | || ||||||||||||| | | |||| ||||||||||| |||||||||||||| | ||| ||| | || | | ||| || |
|
|
| T |
3934152 |
tttagagggtaacatacccaatgaagatatctaagaccagttggaaaagattcaagcccttgaggaaaaagatccaaatagtcatcaaaatcaacccaaa |
3934053 |
T |
|
| Q |
268 |
aatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct |
324 |
Q |
| |
|
||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3934052 |
aattcaaaaattggaggttggtcatcttatcaaatacatgagggcttaactttagct |
3933996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 3921031 - 3920865
Alignment:
| Q |
74 |
atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat |
173 |
Q |
| |
|
|||| |||||||||| ||||||||||| |||||||| | | ||| | ||||||||||||||||||||||||| | | |||| ||||||| ||||||| |
|
|
| T |
3921031 |
atattcaattacctgtactccacaccatagcttttccattcgaccaagatacaagtccaatataacaagattctcagcaaaaaacttctctgagaatgat |
3920932 |
T |
|
| Q |
174 |
tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaa |
240 |
Q |
| |
|
||||||||| | | | |||||||||||||| ||| |||| ||||||||||| |||||||||||||| |
|
|
| T |
3920931 |
tttagagggtaatctatccaatgaagatatcttaaaccagttggaaaagattcaagcccttgaggaa |
3920865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 4008825 - 4008942
Alignment:
| Q |
65 |
ggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctct |
164 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||| ||||||||||||| | | | ||| |||||||||| ||||||||||||||||| | |||||| |||| | |
|
|
| T |
4008825 |
ggaagatacatagtcaattaccttcactccataccaaagcttttctacttggctaaatgacaagtcaaatataacaagattctccgcagaaaacttcttt |
4008924 |
T |
|
| Q |
165 |
gggaatgattttagaggg |
182 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
4008925 |
ggcaatgattttagaggg |
4008942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 3920817 - 3920775
Alignment:
| Q |
282 |
aggttggtcatcttatcaaatacatgacggcttaactttagct |
324 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3920817 |
aggttggtcatcttatcaaatacatgagggcttaactttagct |
3920775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 4009029 - 4009093
Alignment:
| Q |
260 |
accaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct |
324 |
Q |
| |
|
|||| |||||| |||||| ||||||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
4009029 |
accatgaaaatccaaaaatagcaggttggtcatcttagcaaatacatgagggcttaacttcagct |
4009093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 4017510 - 4017574
Alignment:
| Q |
84 |
acctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctc |
148 |
Q |
| |
|
|||||||||||| ||| |||||||||| | ||||||||||||||||||||||||| || ||||| |
|
|
| T |
4017510 |
acctgcactccatgccagagcttttcaactcgactatatgacaagtccaatataacgagtttctc |
4017574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 3964796 - 3964730
Alignment:
| Q |
82 |
ttacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctc |
148 |
Q |
| |
|
|||||||||||||| ||| || ||||||| | ||||||||||||||||||||||||| || ||||| |
|
|
| T |
3964796 |
ttacctgcactccatgccagagtttttcaactcgactatatgacaagtccaatataacgagtttctc |
3964730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 149; Significance: 3e-78; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 415 - 730
Target Start/End: Original strand, 13397124 - 13397439
Alignment:
| Q |
415 |
atttttaaccaacatgacaaatattaatctaaaaatgacatatttt-ttaccttgtcatttttcaatacatcataaatttcatctggattccataatcga |
513 |
Q |
| |
|
|||||| ||||| ||||||||| ||| ||||||| || || ||||| ||||||||||||||||||||||||| || || ||| |||| |||||||||| |
|
|
| T |
13397124 |
attttttaccaaaatgacaaatgtta-tctaaaattgccaaatttttttaccttgtcatttttcaatacatcgtagataatatcaggatcccataatcga |
13397222 |
T |
|
| Q |
514 |
ctgcgtttttcagggtgttctctagattcttggcgaactacctcccgacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatag |
613 |
Q |
| |
|
|||| |||| ||||| ||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13397223 |
ctgcattttctagggtcttcactagattcttggcgaacaacctcgcgacccatttcctgtagaatgtcatgcatagatataacattatctttagaaatag |
13397322 |
T |
|
| Q |
614 |
ttataagagctttgtctttcaagctttctaacccagcagccactgaattatcactgttagaatctttcaataaaagtgttatgtaacccaatttcaaatt |
713 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||| ||| || ||||||||||| | | ||||||||||||||||| | ||||| ||| ||||||| | |
|
|
| T |
13397323 |
ttataagagctttatctttcaacctttctaacccaatagctacagaattatcactttcataatctttcaataaaagtttcatgtactccactttcaaact |
13397422 |
T |
|
| Q |
714 |
caacccattgaagaaac |
730 |
Q |
| |
|
|| ||| |||||||||| |
|
|
| T |
13397423 |
catcccgttgaagaaac |
13397439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 79 - 360
Target Start/End: Original strand, 13396800 - 13397087
Alignment:
| Q |
79 |
caattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgattttag |
178 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | || ||||||| |||| ||| |||||||||||| || |||||| |||||||||||||||||||| |
|
|
| T |
13396800 |
caattacctgtactccacaccaaagcttttctacaaggctatatggcaagcccagtataacaagattatcaacagaaaacttctctgggaatgattttag |
13396899 |
T |
|
| Q |
179 |
agggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaatacaaaaac |
278 |
Q |
| |
|
|||| | | |||||| ||||||| ||| | || ||||||| ||||||||||||||||||||| ||| ||||| || ||| || ||||||||||||| |
|
|
| T |
13396900 |
agggtaatgcatccaataaagatatcttagatcagttggaaaaaattgaagcccttgaggaagacgatccaaaccgtctatatcatgaaaatacaaaaat |
13396999 |
T |
|
| Q |
279 |
cgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaa------acttatgcttctaatagcat |
360 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||| |||| ||| |||| || ||| |||||||||||||||||||| |
|
|
| T |
13397000 |
ttcaggttggtcatcttatcaaatacaggcgggcttaacttcagcttcctaattgctgacaagtctacacttatgcttctaatagcat |
13397087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 460 - 632
Target Start/End: Original strand, 7074733 - 7074905
Alignment:
| Q |
460 |
tttaccttgtcatttttcaatacatcataaatttcatctggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctccc |
559 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| ||||| |||| | ||| ||| || || ||| |||| | ||| ||||||||||||||| | ||||| |
|
|
| T |
7074733 |
tttaccttgtcatctttcaatacatgataaatgtcatcaggatccaatagtcggcttcggtttccaggttcttcaacagattcttggcgaacaatctccc |
7074832 |
T |
|
| Q |
560 |
gacccatttcttgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttgtcttt |
632 |
Q |
| |
|
| | ||||||||| |||||||||||| |||| || | | || ||||||||||| ||||||||| ||||| |
|
|
| T |
7074833 |
tagctgtttcttgtataatgtcatgcattgatacaatgctttgttgagaaatagttacaagagctttatcttt |
7074905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 27682726 - 27682682
Alignment:
| Q |
15 |
cagagagagctacgggaggaagagaaagaatgagggaagtgttat |
59 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27682726 |
cagagagagctacgggaggaaaagaaagaatgagggaagtgttat |
27682682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 27690045 - 27690003
Alignment:
| Q |
17 |
gagagagctacgggaggaagagaaagaatgagggaagtgttat |
59 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27690045 |
gagagagctacgggaggaaaagaaagaatgagggaagtgttat |
27690003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 30230240 - 30230282
Alignment:
| Q |
17 |
gagagagctacgggaggaagagaaagaatgagggaagtgttat |
59 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30230240 |
gagagagctacgggaggaaaagaaagaatgagggaagtgttat |
30230282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 13143892 - 13143937
Alignment:
| Q |
15 |
cagagagagctacgggaggaagagaaag-aatgagggaagtgttat |
59 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
13143892 |
cagagagagctacgggaggaaaagaaagaaatgaggaaagtgttat |
13143937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 31712578 - 31712534
Alignment:
| Q |
15 |
cagagagagctacgggaggaagagaaagaatgagggaagtgttat |
59 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31712578 |
cagagagagctacgggaggaaaagaaagaatgagggaagtgttat |
31712534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 39156533 - 39156577
Alignment:
| Q |
15 |
cagagagagctacgggaggaagagaaagaatgagggaagtgttat |
59 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39156533 |
cagagagagctacgggaggaaaagaaagaatgagggaagtgttat |
39156577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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