View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11635_high_7 (Length: 652)

Name: NF11635_high_7
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11635_high_7
NF11635_high_7
[»] chr6 (12 HSPs)
chr6 (189-445)||(12778685-12778941)
chr6 (527-634)||(12778987-12779094)
chr6 (189-309)||(22873501-22873621)
chr6 (189-316)||(34374063-34374190)
chr6 (189-319)||(18203116-18203245)
chr6 (189-297)||(22888956-22889064)
chr6 (189-297)||(22910499-22910607)
chr6 (189-308)||(12881715-12881833)
chr6 (17-57)||(27989680-27989720)
chr6 (3-54)||(13330103-13330154)
chr6 (4-57)||(2616489-2616542)
chr6 (8-57)||(12188317-12188366)
[»] chr7 (20 HSPs)
chr7 (189-319)||(11001102-11001232)
chr7 (189-288)||(4303119-4303218)
chr7 (189-319)||(8915449-8915578)
chr7 (206-318)||(1369495-1369608)
chr7 (1-57)||(26459417-26459473)
chr7 (1-57)||(39631857-39631913)
chr7 (1-54)||(29196921-29196974)
chr7 (1-57)||(7801193-7801249)
chr7 (1-57)||(43590920-43590976)
chr7 (194-309)||(11228411-11228525)
chr7 (207-318)||(13883029-13883141)
chr7 (4-57)||(25021345-25021398)
chr7 (1-53)||(17041019-17041071)
chr7 (1-57)||(18363709-18363765)
chr7 (1-53)||(20335838-20335890)
chr7 (1-57)||(30442501-30442557)
chr7 (1-53)||(33222387-33222439)
chr7 (1-57)||(41519271-41519327)
chr7 (1-57)||(42836008-42836064)
chr7 (1-53)||(43215201-43215253)
[»] chr4 (18 HSPs)
chr4 (196-319)||(22716293-22716416)
chr4 (196-319)||(22988801-22988924)
chr4 (195-290)||(7634998-7635093)
chr4 (189-296)||(10494626-10494733)
chr4 (1-57)||(37109358-37109414)
chr4 (1-52)||(16581711-16581762)
chr4 (3-53)||(31759667-31759717)
chr4 (1-53)||(7292805-7292857)
chr4 (1-57)||(49576901-49576957)
chr4 (189-284)||(6659657-6659751)
chr4 (3-57)||(4923563-4923617)
chr4 (4-54)||(8030214-8030264)
chr4 (1-55)||(38869783-38869837)
chr4 (1-57)||(2185039-2185095)
chr4 (1-57)||(4249190-4249246)
chr4 (1-57)||(7949461-7949517)
chr4 (5-57)||(19238588-19238640)
chr4 (1-57)||(19680795-19680851)
[»] chr5 (13 HSPs)
chr5 (189-295)||(21845218-21845324)
chr5 (385-445)||(18840378-18840438)
chr5 (210-319)||(18252099-18252208)
chr5 (1-57)||(25627070-25627126)
chr5 (1-57)||(26078058-26078114)
chr5 (4-57)||(16436631-16436683)
chr5 (1-57)||(87430-87486)
chr5 (1-57)||(14285174-14285230)
chr5 (1-53)||(22737099-22737151)
chr5 (1-53)||(34984823-34984875)
chr5 (1-54)||(17028271-17028324)
chr5 (4-53)||(30883208-30883257)
chr5 (1-57)||(7918476-7918532)
[»] chr1 (16 HSPs)
chr1 (194-299)||(10926895-10927000)
chr1 (196-319)||(13441924-13442045)
chr1 (209-319)||(23988904-23989014)
chr1 (1-57)||(33700780-33700836)
chr1 (1-57)||(36371483-36371539)
chr1 (6-57)||(31794276-31794327)
chr1 (1-54)||(6122810-6122863)
chr1 (1-57)||(4566561-4566617)
chr1 (1-57)||(9165202-9165258)
chr1 (1-57)||(52116788-52116844)
chr1 (264-319)||(8220181-8220236)
chr1 (1-46)||(3265948-3265993)
chr1 (1-57)||(6650608-6650664)
chr1 (1-57)||(8177189-8177245)
chr1 (3-51)||(10526842-10526890)
chr1 (189-309)||(10927794-10927913)
[»] chr2 (20 HSPs)
chr2 (194-319)||(280295-280419)
chr2 (196-294)||(35681910-35682008)
chr2 (189-322)||(32162243-32162375)
chr2 (1-57)||(11251100-11251156)
chr2 (189-288)||(31635997-31636096)
chr2 (1-54)||(21195683-21195736)
chr2 (1-57)||(11062373-11062429)
chr2 (1-57)||(40416397-40416453)
chr2 (1-57)||(42327402-42327458)
chr2 (1-57)||(42922427-42922484)
chr2 (5-57)||(12086140-12086192)
chr2 (1-57)||(23052530-23052586)
chr2 (189-257)||(27952653-27952721)
chr2 (1-57)||(29503284-29503340)
chr2 (196-295)||(22011087-22011186)
chr2 (220-294)||(18945657-18945731)
chr2 (260-318)||(36648555-36648613)
chr2 (5-53)||(19322785-19322833)
chr2 (1-57)||(37480088-37480144)
chr2 (1-57)||(42602567-42602623)
[»] scaffold0054 (1 HSPs)
scaffold0054 (189-297)||(10352-10460)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-57)||(19969-20025)
[»] chr8 (20 HSPs)
chr8 (206-294)||(23573240-23573328)
chr8 (192-319)||(24577809-24577936)
chr8 (1-57)||(3624593-3624649)
chr8 (1-57)||(12988441-12988497)
chr8 (189-320)||(2688851-2688980)
chr8 (1-57)||(8794352-8794408)
chr8 (567-627)||(37330945-37331005)
chr8 (1-57)||(44780121-44780177)
chr8 (2-57)||(2203505-2203560)
chr8 (1-54)||(11819792-11819845)
chr8 (1-46)||(33017238-33017283)
chr8 (1-57)||(16852353-16852409)
chr8 (1-57)||(19703494-19703550)
chr8 (3-57)||(5264557-5264611)
chr8 (189-246)||(26377776-26377833)
chr8 (1-50)||(27750750-27750799)
chr8 (1-54)||(33727880-33727933)
chr8 (1-57)||(968375-968431)
chr8 (1-57)||(18540311-18540367)
chr8 (1-57)||(35690071-35690127)
[»] chr3 (13 HSPs)
chr3 (1-57)||(27093368-27093424)
chr3 (196-319)||(365886-366008)
chr3 (1-57)||(8170685-8170741)
chr3 (207-319)||(8536677-8536789)
chr3 (1-57)||(16354899-16354955)
chr3 (1-53)||(53412962-53413014)
chr3 (3-57)||(32651447-32651501)
chr3 (1-54)||(8075134-8075187)
chr3 (1-57)||(14186661-14186716)
chr3 (1-57)||(14339623-14339679)
chr3 (1-57)||(27923050-27923106)
chr3 (1-57)||(30311319-30311375)
chr3 (1-57)||(37788472-37788528)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-57)||(94978-95034)
[»] scaffold0240 (1 HSPs)
scaffold0240 (260-320)||(15683-15743)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-57)||(6926-6982)
[»] scaffold0172 (1 HSPs)
scaffold0172 (4-57)||(15787-15840)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-53)||(25354-25406)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-57)||(42527-42583)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 4e-95; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 189 - 445
Target Start/End: Original strand, 12778685 - 12778941
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||||||||||| ||| |||||||||| ||||||| ||||||||||||||||| |||||||| |  ||| ||||||||| ||||||||||||||||||||    
T  12778685 cctcttacatcagtctcctccacctctgaagaacttgaccccaaattctcattctgatagagtt--tcctttgcatgttgactcctccaatgaacaagag 12778782  T
Q  289 accaccctcttagatcccattaagtgaaatgagaggacattgttttttgtttccaagctctgtattcaacctcgattagtttgttgaat--tagatagtg 386  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  12778783 acaaccctcttggatcccattaagtgaaatgagaggacattgttttttgtttctaagctctgtattcaacctggattagtttgttgaattatagatagtg 12778882  T
Q  387 ttcaatcaattgtgttttggaactgtctctatatatctgatgaaggcattgaagtgaca 445  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  12778883 ttcaatcaattgtgttttggagctgtctctatatatctgatggaagcattgaagtgaca 12778941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 527 - 634
Target Start/End: Original strand, 12778987 - 12779094
Alignment:
Q  527 tagctatgtgaaacttgataccaagactttaaattgtactagtgaaagtattatctgcattgctcactgaagaacttacatatttgcagtatctagttgt 626  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12778987 tagctatgcgaaacttgataccaagactttaaattgtactagtgaaagtattatctgcattgctcactgaagaacttacatatttgcagtatctagttgt 12779086  T
Q  627 gatgcatc 634  Q
    ||||||||    
T  12779087 gatgcatc 12779094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 309
Target Start/End: Complemental strand, 22873621 - 22873501
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| |||  ||||||||||| ||| |||| ||||| |||||||||||||| ||| |||||| ||||| || ||||||||||||||||||||    
T  22873621 cctcctacatcagtctcatccacctctaaggaaatcgatcccaagttctcattatgataaagagcttcccatgcatattgactcctccaatgaacaagag 22873522  T
Q  289 accaccctcttagatcccatt 309  Q
    || |||||| | |||||||||    
T  22873521 acaaccctcctggatcccatt 22873501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 34374063 - 34374190
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||||||||| | ||| |||||| ||| |||||||| ||||| | |||||||| ||||| |||  ||||| |||||||| |||| |||||||||||||||    
T  34374063 cctcttacattagtctcctccacatctgaagaactccaccccgagttctcattttgataaagagattcccatgcatgttgactcttccaatgaacaagag 34374162  T
Q  289 accaccctcttagatcccattaagtgaa 316  Q
    ||||| ||||| ||||||||| ||||||    
T  34374163 accactctcttggatcccattgagtgaa 34374190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 18203245 - 18203116
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| |||||||||| ||||||||||||| |  |||||||| | ||| |||  || || |||||||| ||||||| ||||||||||||    
T  18203245 cctcctacatcagtctcctccacctctgaagaactcgacccgag-ttctcattttaataaagagttttccatgcatgttgactcctcgaatgaacaagag 18203147  T
Q  289 accaccctcttagatcccattaagtgaaatg 319  Q
    ||||||||| ||||||||||| |||||||||    
T  18203146 accaccctcctagatcccattcagtgaaatg 18203116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 22889064 - 22888956
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| |||  ||||||||||| ||| | |||||||| |||||||||||||| ||| |||||| ||||| || ||||||||||||||||||||    
T  22889064 cctcctacatcagtctcatccacctctaaggaaatagaccccaagttctcattatgataaagagcttcccatgcatattgactcctccaatgaacaagag 22888965  T
Q  289 accaccctc 297  Q
    || ||||||    
T  22888964 acaaccctc 22888956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 22910607 - 22910499
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| |||  ||||||||||| ||| | |||||||| |||||||||||||| ||| |||||| || || || ||||||||||||||||||||    
T  22910607 cctcctacatcagtctcatccacctctaaggaaatagaccccaagttctcattatgataaagagcttcccatgtatattgactcctccaatgaacaagag 22910508  T
Q  289 accaccctc 297  Q
    || ||||||    
T  22910507 acaaccctc 22910499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 12881833 - 12881715
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| ||||||||   |||||||||||||| |  |||||||  |||| ||| |||||| |||||||| ||| || |||||||||||||    
T  12881833 cctcctacatcagtctcctccacctaagaagaactcgaccccgagctctcattccgata-agaacttcccatgcatgttgacttcttcaatgaacaagag 12881735  T
Q  289 accaccctcttagatcccat 308  Q
    ||||||||| | ||||||||    
T  12881734 accaccctcctggatcccat 12881715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 27989680 - 27989720
Alignment:
Q  17 aggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  27989680 aggagcatactcccaagttccaagctaataccactaggcca 27989720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 13330154 - 13330103
Alignment:
Q  3 ctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||||||||| ||||||| |||| |||||||| ||| |||||||||||||    
T  13330154 ctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactagg 13330103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 2616542 - 2616489
Alignment:
Q  4 tgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||||||||| ||||||| |   ||||| |||||||||||||||    
T  2616542 tgagaccttgaagaggagcacacttccatgactcaagctaataccactaggcca 2616489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 12188317 - 12188366
Alignment:
Q  8 accttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaataccactaggcca 12188366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 11001102 - 11001232
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||| |||||    
T  11001102 cctcctacatcagtctcctccacctctgaagaactcgaccccaaattctcattgtgataaagagcttcccatgcatgttaactcctccaatgaaaaagag 11001201  T
Q  289 accaccctcttagatcccattaagtgaaatg 319  Q
    | || |||| | ||||||||| |||||||||    
T  11001202 atcatcctcctggatcccattgagtgaaatg 11001232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 189 - 288
Target Start/End: Complemental strand, 4303218 - 4303119
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| |||||||||| |||||||||| ||| | |||||||| ||||| ||| |||||| |||||||  ||||||||||||||||||||    
T  4303218 cctcctacatcagtctcctccacctctgaagaactcgatcccgagttctcattttgataaagagcttcccatgcatgtcgactcctccaatgaacaagag 4303119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 319
Target Start/End: Original strand, 8915449 - 8915578
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| ||||| |||| ||||||| |||||| |||||||||| | ||| | | || ||| |||||||| |||||||| |||||||||||    
T  8915449 cctcctacatcagtctcctccatctctgaagaactagaccccgaattctcattctaataaaaagct-cccatgcatgttgactcctccgatgaacaagag 8915547  T
Q  289 accaccctcttagatcccattaagtgaaatg 319  Q
    |||| |||  ||||| |||||  ||||||||    
T  8915548 accaaccttctagatgccattgggtgaaatg 8915578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 1369608 - 1369495
Alignment:
Q  206 ctccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaac-aagagaccaccctcttagatc 304  Q
    |||||||||| |||||||||| ||| | |||| ||| ||||| ||| |||||| || ||||| ||||||||||||||| ||| ||||||||||   ||||    
T  1369608 ctccacctctgaagaactcgagcccgagttcttattctgataaagagcttcccatgaatgttgactcctccaatgaacaaagcgaccaccctccacgatc 1369509  T
Q  305 ccattaagtgaaat 318  Q
    ||||| | ||||||    
T  1369508 ccattgaatgaaat 1369495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26459417 - 26459473
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  26459417 acctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggcca 26459473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39631913 - 39631857
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| ||||||| |||| ||| || ||||||||||||||||||||||    
T  39631913 acctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggcca 39631857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29196974 - 29196921
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    ||||||||||||||||| ||||| |||||||||| |||| |||||| |||||||    
T  29196974 acctgagaccttgaagacgagcacacttccaagtcccaaaccaatatcactagg 29196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7801249 - 7801193
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||||||||||||||| ||| ||| || ||||| ||||||||| ||||||    
T  7801249 acctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggcca 7801193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43590976 - 43590920
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||| |||||||| ||| |||||| ||||||||||||||| ||||||    
T  43590976 acctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggcca 43590920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 11228525 - 11228411
Alignment:
Q  194 tacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccac 293  Q
    ||||||| ||| |||| ||||| ||||||| | |||| | |||||||| | ||| ||| |||||| |||||| | ||||||  |||||||||||||| ||    
T  11228525 tacatcagtcttctcc-cctcttaagaacttgcccccgagttctcattctaataaagaacttcccatgcatgatgactcctataatgaacaagagactac 11228427  T
Q  294 cctcttagatcccatt 309  Q
    |||||| |||| ||||    
T  11228426 cctcttggatctcatt 11228411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 318
Target Start/End: Original strand, 13883029 - 13883141
Alignment:
Q  207 tccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcat--gttaactcctccaatgaacaagagaccaccctcttagatc 304  Q
    ||||||||||||||||||||||| |  |||||||| | ||| |||  ||| | |||||  |||  |||||||||| ||||||||||||||||| | ||||    
T  13883029 tccacctctaaagaactcgacccgag-ttctcattctaataaagagattctcatgcatatgttggctcctccaataaacaagagaccaccctcctggatc 13883127  T
Q  305 ccattaagtgaaat 318  Q
    ||||| | ||||||    
T  13883128 ccattgaatgaaat 13883141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 25021345 - 25021398
Alignment:
Q  4 tgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||| |||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggcca 25021398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17041019 - 17041071
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    |||||||||||||| |||||||| |||||||  | |||||||||| |||||||    
T  17041019 acctgagaccttgaggaggagcacacttccagatcccaagccaatgccactag 17041071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18363765 - 18363709
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||| |  |||||| ||||||||||||||    
T  18363765 acctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggcca 18363709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20335838 - 20335890
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    ||||||||||| || |||||||| ||| |||||| ||||||||||||| ||||    
T  20335838 acctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctag 20335890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30442557 - 30442501
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||| ||||||||| |||||||| ||| ||| || |||||||||||||||| |||||    
T  30442557 acctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggcca 30442501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33222439 - 33222387
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    |||||||||||||| || ||| | ||||||| || ||||||||||||||||||    
T  33222439 acctgagaccttgaggatgagtacacttccaggtcccaagccaataccactag 33222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41519271 - 41519327
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| | || | ||||| ||||||||||||||||    
T  41519271 acctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggcca 41519327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42836008 - 42836064
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||| |||||| || ||||| ||| ||| || ||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggcca 42836064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43215253 - 43215201
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    |||||||||||||| |||||||| ||| | | || ||||||||||||||||||    
T  43215253 acctgagaccttgaggaggagcacactccgaggtcccaagccaataccactag 43215201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 22716416 - 22716293
Alignment:
Q  196 catcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccc 295  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||| ||||| ||| |||||| | |||||| |||||||||||||||||||||||||||    
T  22716416 catcagtctcctccagctctaaagaactcgaccccgagttctcattttgataaagagcttcccattcatgttgactcctccaatgaacaagagaccaccc 22716317  T
Q  296 tcttagatcccattaagtgaaatg 319  Q
    || |  ||| |||| |||||||||    
T  22716316 tcctgaatcacattgagtgaaatg 22716293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 22988801 - 22988924
Alignment:
Q  196 catcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccc 295  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||| ||||| ||| |||||| | |||||| |||||||||||||||||||||||||||    
T  22988801 catcagtctcctccagctctaaagaactcgaccccgagttctcattttgataaagagcttcccattcatgttgactcctccaatgaacaagagaccaccc 22988900  T
Q  296 tcttagatcccattaagtgaaatg 319  Q
    || |  ||| |||| |||||||||    
T  22988901 tcctgaatcacattgagtgaaatg 22988924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 7635093 - 7634998
Alignment:
Q  195 acatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagac 290  Q
    |||||| ||| ||||| |||| ||||||||||||||||||||||||| | ||| | | || ||| |||||||| |||||||| |||||||||||||    
T  7635093 acatcagtctcctccatctctgaagaactcgaccccaaattctcattctaataaaaagctccccatgcatgttgactcctccgatgaacaagagac 7634998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 10494733 - 10494626
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| ||| || ||| |||||||||||| ||| |||| ||  ||||| | | |||||| |||||||  ||||||||||||||||||||    
T  10494733 cctcatacatcagtcttctctacttctgaagaactcgacctcaagttctgatcctgataaatagcttcccatgcatgtcgactcctccaatgaacaagag 10494634  T
Q  289 accaccct 296  Q
    ||||||||    
T  10494633 accaccct 10494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37109358 - 37109414
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  37109358 acctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggcca 37109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16581762 - 16581711
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccacta 52  Q
    |||||||||||||| |||||||| ||| ||| ||||||||||||||||||||    
T  16581762 acctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31759667 - 31759717
Alignment:
Q  3 ctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||||||||    
T  31759667 ctgagaccttgaggaggagcacactcccaagtcccaagccaataccactag 31759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7292805 - 7292857
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    ||||||||| |||| |||||||| ||| ||| |||||||||||||||||||||    
T  7292805 acctgagactttgaggaggagcacactcccaggttccaagccaataccactag 7292857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49576901 - 49576957
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||||| | ||||||||||||| ||||||    
T  49576901 acctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggcca 49576957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 6659657 - 6659751
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaaca 284  Q
    |||| ||||||| ||| ||| |||||| |||||||||| |||||||||||||  ||||| ||| |||||| || || || |||||||||| |||||    
T  6659657 cctcctacatcagtctcctctacctctgaagaactcga-cccaaattctcatcttgataaagagcttcccatgaatattgactcctccaaagaaca 6659751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 4923617 - 4923563
Alignment:
Q  3 ctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||| || ||||| |||| |||||||||| |||||| ||||||||||    
T  4923617 ctgagaccttgacgatgagcacactttcaagttccaaaccaataacactaggcca 4923563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 8030214 - 8030264
Alignment:
Q  4 tgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    ||||||||||| |||||||| ||| |||||| ||||||| |||||||||||    
T  8030214 tgagaccttgaggaggagcacactcccaagtcccaagcctataccactagg 8030264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38869837 - 38869783
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggc 55  Q
    |||||||||||||| |||||||| ||| |||  | ||||||||||||||||||||    
T  38869837 acctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2185039 - 2185095
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| ||||  ||||||| ||| ||| ||||||||||| |||||||||||||    
T  2185039 acctgagactttgagaaggagcacactcccaggttccaagccattaccactaggcca 2185095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4249246 - 4249190
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| | || | ||||||| ||||||||||||||    
T  4249246 acctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggcca 4249190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7949461 - 7949517
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| | | || ||||||||||||| ||||||||    
T  7949461 acctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggcca 7949517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 19238588 - 19238640
Alignment:
Q  5 gagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||| || |||||||| ||| |||||| ||||||||||||||| ||||||    
T  19238588 gagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggcca 19238640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19680795 - 19680851
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||| ||||||||| || ||||| ||| |||||| |||||| |||||||||||||||    
T  19680795 acctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggcca 19680851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 21845218 - 21845324
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||||| ||||| |||  ||||||||| |||||||||||||| | |||||||| ||||| ||| |||||| |||||||| |||||||||||||||||||     
T  21845218 cctcttgcatcagtctgttccacctctgaagaactcgaccccgagttctcattctgataaagagcttcccatgcatgttgactcctccaatgaacaagaa 21845317  T
Q  289 accaccc 295  Q
    |||||||    
T  21845318 accaccc 21845324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 18840438 - 18840378
Alignment:
Q  385 tgttcaatcaattgtgttttggaactgtctctatatatctgatgaaggcattgaagtgaca 445  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  18840438 tgttcaatcaattgtgttttggaactttctctatgtatctgatgaaagcattgaagtgaca 18840378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 18252208 - 18252099
Alignment:
Q  210 acctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccctcttagatcccatt 309  Q
    |||||| ||||||| |||||| | |||||||||||||| | | ||| || |||||||  |||||||||||| |||||||||||||||| |  ||||||||    
T  18252208 acctctgaagaacttgaccccgagttctcattatgataaacagctttccatgcatgtggactcctccaatggacaagagaccaccctcctgaatcccatt 18252109  T
Q  310 aagtgaaatg 319  Q
     |||||||||    
T  18252108 tagtgaaatg 18252099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25627126 - 25627070
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  25627126 acctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggcca 25627070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26078058 - 26078114
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||    
T  26078058 acctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggcca 26078114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 16436683 - 16436631
Alignment:
Q  4 tgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  16436683 tgagaccttgaggaggagcacact-ccaagtcccaagccaataccactaggcca 16436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 87430 - 87486
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||  ||||||| ||||||||||||||||    
T  87430 acctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggcca 87486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14285230 - 14285174
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| ||| ||||||||||||| ||||| |||||    
T  14285230 acctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggcca 14285174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22737151 - 22737099
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    ||||||||| |||  |||||||| |||||||||| ||||||||||||||||||    
T  22737151 acctgagacattggggaggagcacacttccaagtcccaagccaataccactag 22737099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34984875 - 34984823
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    |||| ||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  34984875 acctaagaccttgaggaggagcacactcccaggttccaagccaataccactag 34984823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17028271 - 17028324
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||||||||||| |||||||| ||| |||||| |||| ||||||| ||||||    
T  17028271 acctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactagg 17028324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30883208 - 30883257
Alignment:
Q  4 tgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    ||||||||||| |||||||| ||| ||| || ||||||||||||||||||    
T  30883208 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactag 30883257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7918476 - 7918532
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||| ||||||||| ||||||   ||| ||| |||||||||||||||||||||||||    
T  7918476 acctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggcca 7918532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 299
Target Start/End: Complemental strand, 10927000 - 10926895
Alignment:
Q  194 tacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccac 293  Q
    ||||||| ||| |||||||||| |||||||||||||| | |||||||| ||||| ||| |||||| |||||||| |||||||||||||| |||||| ||     
T  10927000 tacatcagtctcctccacctctgaagaactcgaccccgagttctcattctgataaagaacttcccatgcatgttgactcctccaatgaataagagatcat 10926901  T
Q  294 cctctt 299  Q
    ||||||    
T  10926900 cctctt 10926895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 13441924 - 13442045
Alignment:
Q  196 catcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccc 295  Q
    ||||| ||| |||||||||| ||||| |||| |  || |||||||| ||||| ||| |||||| |||||||| ||||||||||||| ||||||| || ||    
T  13441924 catcagtctcctccacctctgaagaattcgatc--aagttctcattctgataaagagcttcccatgcatgttgactcctccaatgagcaagagatcatcc 13442021  T
Q  296 tcttagatcccattaagtgaaatg 319  Q
    || | ||||||||| |||||||||    
T  13442022 tcctggatcccattgagtgaaatg 13442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 23989014 - 23988904
Alignment:
Q  209 cacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccctcttagatcccat 308  Q
    ||||||| ||||||||||||   | ||||| || || || ||| |||||||||||||||||||||| |||||| ||||||| ||||||  | ||||||||    
T  23989014 cacctctgaagaactcgaccttgagttctcgttttggtaaagagcttcccttgcatgttaactccttcaatgagcaagagatcacccttctggatcccat 23988915  T
Q  309 taagtgaaatg 319  Q
    | ||| |||||    
T  23988914 tgagttaaatg 23988904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33700780 - 33700836
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||  ||||||||||||||||||||||||    
T  33700780 acctgagaccttgaggaggagcacactcccagattccaagccaataccactaggcca 33700836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36371539 - 36371483
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||| ||||||||| |||||||| ||| ||| |||||||||||||||||||||||||    
T  36371539 acctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggcca 36371483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 31794276 - 31794327
Alignment:
Q  6 agaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggcca 31794327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6122863 - 6122810
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||||    
T  6122863 acctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagg 6122810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4566617 - 4566561
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||| ||| |||||||| ||| ||| |||||||||||||| ||||||||||    
T  4566617 acctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggcca 4566561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9165202 - 9165258
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  9165202 acctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggcca 9165258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52116788 - 52116844
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||| |||||||| ||| |||||| ||||||||||||||| ||||||    
T  52116788 acctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggcca 52116844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 8220236 - 8220181
Alignment:
Q  264 tgttaactcctccaatgaacaagagaccaccctcttagatcccattaagtgaaatg 319  Q
    |||| ||||||||| |||||||||||| |||||| | ||||||||| |||||||||    
T  8220236 tgttgactcctccagtgaacaagagacgaccctcctggatcccattgagtgaaatg 8220181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3265993 - 3265948
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaata 46  Q
    |||||||||||||| |||||||| ||| |||||||||||| |||||    
T  3265993 acctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6650664 - 6650608
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||| |||||||||||| ||   | ||||||||||||||||||||||    
T  6650664 acctgagacattgaggaggagcatactccccgatcccaagccaataccactaggcca 6650608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8177189 - 8177245
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||| ||||||| |||||||| ||| |||  | ||||||||||||||||||||||    
T  8177189 acctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggcca 8177245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 10526890 - 10526842
Alignment:
Q  3 ctgagaccttgaagaggagcatacttccaagttccaagccaataccact 51  Q
    |||||||||||| |||||||| ||| ||| || ||||||||||||||||    
T  10526890 ctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 309
Target Start/End: Complemental strand, 10927913 - 10927794
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| |||| || ||| |||||| ||| |||||||||||||| | |||||||| | ||| |||  ||| | |||| ||| |||| | |||| ||||||||    
T  10927913 cctcctacaacagtctcctccacttctgaagaactcgaccccgagttctcattctaataaagagtttctcatgcaagttgactcttacaataaacaagag 10927814  T
Q  289 accaccctcttagatcccatt 309  Q
    ||| ||||| |||||||||||    
T  10927813 acc-ccctcctagatcccatt 10927794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 280295 - 280419
Alignment:
Q  194 tacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccac 293  Q
    ||||||| ||| |||||||||| |||||||||||||| | |||||||| ||||| ||| |||| | |||||||| | ||||||||||||| ||||||||     
T  280295 tacatcagtctcctccacctctgaagaactcgaccccgagttctcattctgataaagagcttcacatgcatgttgaatcctccaatgaac-agagaccat 280393  T
Q  294 cctcttagatcccattaagtgaaatg 319  Q
    |||  | ||||||||| |||||||||    
T  280394 ccttctggatcccattgagtgaaatg 280419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 35682008 - 35681910
Alignment:
Q  196 catcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccacc 294  Q
    ||||| ||| |||||||||| |||||||||||||||| ||||| || ||||| ||| ||| |  |||||||| |||||| |||||||||||||||||||    
T  35682008 catcagtctcctccacctctgaagaactcgaccccaagttctctttctgataaagagctttctatgcatgttgactccttcaatgaacaagagaccacc 35681910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 189 - 322
Target Start/End: Original strand, 32162243 - 32162375
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||||||||| | ||| ||||| |||| || ||||| |||   | |||||||| ||||| ||| |||||| |||||||| |||| || ||||||||||||    
T  32162243 cctcttacattagtctcctccatctctgaaaaactcaaccttgagttctcattctgataaagagcttcccatgcatgttgactc-tctaatgaacaagag 32162341  T
Q  289 accaccctcttagatcccattaagtgaaatgaga 322  Q
    ||||||||| | ||||||||| ||||||||||||    
T  32162342 accaccctccttgatcccattgagtgaaatgaga 32162375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11251156 - 11251100
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||    
T  11251156 acctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagcca 11251100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 288
Target Start/End: Complemental strand, 31636096 - 31635997
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| ||| |||||||||| ||||||||||  || | ||||||||  |||| |||  ||||| |||||||| ||||||||||||||||||||    
T  31636096 cctcctacatcagtctcctccacctctgaagaactcgaatccgagttctcatttagataaagagtttcccatgcatgttgactcctccaatgaacaagag 31635997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21195683 - 21195736
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||||||||||| |||||||| ||| |||||||||||||| |||||||||||    
T  21195683 acctgagaccttgaggaggagcacactcccaagttccaagcctataccactagg 21195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11062429 - 11062373
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| ||| |||| ||| |||||||||||||||||| ||||||||||    
T  11062429 acctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggcca 11062373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40416397 - 40416453
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||||    
T  40416397 acctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggcca 40416453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42327402 - 42327458
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  42327402 acctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggcca 42327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42922484 - 42922427
Alignment:
Q  1 acctgagacctt-gaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||| || |||||||| ||| ||| |||||||||||||||||||||||||    
T  42922484 acctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggcca 42922427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12086140 - 12086192
Alignment:
Q  5 gagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| ||||||    
T  12086140 gagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggcca 12086192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23052530 - 23052586
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| ||| |||| ||| |||||| ||||||||||||||| ||||||    
T  23052530 acctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggcca 23052586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 27952653 - 27952721
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcc 257  Q
    |||| ||||||| ||| |||||||||| |||||||||||||| | |||||||| ||||| ||| |||||    
T  27952653 cctcctacatcagtctcctccacctctgaagaactcgaccccgagttctcattctgataaagagcttcc 27952721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29503340 - 29503284
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| ||| || |||| |||||||||||||||||    
T  29503340 acctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggcca 29503284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 22011186 - 22011087
Alignment:
Q  196 catcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccc 295  Q
    ||||| ||| ||||||||||||||||||||||||  | |||||||| | ||| |||  ||| | || ||||| |||||| | |||||||||| |||||||    
T  22011186 catcactctcctccacctctaaagaactcgaccctgagttctcattctaataaagaatttctcatgtatgttgactccttcgatgaacaagataccaccc 22011087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 18945731 - 18945657
Alignment:
Q  220 aactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccacc 294  Q
    ||||||| ||| |||||||||| ||||  |||  ||| | | ||||||||||||| |||||||||||||||||||    
T  18945731 aactcgatcccgaattctcattctgattaagagtttctcattcatgttaactcctgcaatgaacaagagaccacc 18945657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 36648613 - 36648555
Alignment:
Q  260 tgcatgttaactcctccaatgaacaagagaccaccctcttagatcccattaagtgaaat 318  Q
    |||||| | |||| ||||||||| |||||||||||||||||||||| ||| | ||||||    
T  36648613 tgcatgatgactcttccaatgaataagagaccaccctcttagatcctattgattgaaat 36648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 19322833 - 19322785
Alignment:
Q  5 gagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    ||||||||||||||||||| ||| ||| || |||| |||||||||||||    
T  19322833 gagaccttgaagaggagcacactcccaggtcccaaaccaataccactag 19322785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37480144 - 37480088
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| |||  || || ||||||||||||||| ||||||    
T  37480144 acctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggcca 37480088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42602623 - 42602567
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||| |||||||||  ||||||| ||| ||| || ||||||||||||||||||||||    
T  42602623 acctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggcca 42602567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 10460 - 10352
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||||| |||  ||||||||||| ||| | |||||||| |||||||||||||| ||| |||||| || || || ||||||||||||||||||||    
T  10460 cctcctacatcagtctcatccacctctaaggaaatagaccccaagttctcattatgataaagagcttcccatgaatattgactcctccaatgaacaagag 10361  T
Q  289 accaccctc 297  Q
    || ||||||    
T  10360 acaaccctc 10352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19969 - 20025
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  19969 acctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggcca 20025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 23573328 - 23573240
Alignment:
Q  206 ctccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccacc 294  Q
    |||||||||| |||||||||||||  | || ||||| ||||| ||| |||||| |||||||| ||||||||||||||||| ||||||||    
T  23573328 ctccacctctgaagaactcgacccggagttttcattttgataaagagcttcccatgcatgttgactcctccaatgaacaaaagaccacc 23573240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 24577809 - 24577936
Alignment:
Q  192 cttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagacc 291  Q
    ||||||||| ||| |||||| ||| ||||| ||||||   | ||||| || ||||| ||| |||| ||||||| || ||||||||||| |||||||||||    
T  24577809 cttacatcagtctcctccacttctgaagaattcgaccttgagttctccttctgatacagaacttcgcttgcatatttactcctccaataaacaagagacc 24577908  T
Q  292 accctcttagatcccattaagtgaaatg 319  Q
    | |||| ||||||||||| | |||||||    
T  24577909 atcctcctagatcccattgactgaaatg 24577936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3624649 - 3624593
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||    
T  3624649 acctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggcca 3624593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12988497 - 12988441
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  12988497 acctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggcca 12988441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 320
Target Start/End: Complemental strand, 2688980 - 2688851
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagag 288  Q
    |||| ||||| | ||| |||||||| | |||||||||| | | | |||||||| | |||||| |  |||| |||||||| |||||||||||||||| |||    
T  2688980 cctcctacatgagtctcctccacctatgaagaactcgatcacgagttctcattctaatagagtt--tcccatgcatgttgactcctccaatgaacatgag 2688883  T
Q  289 accaccctcttagatcccattaagtgaaatga 320  Q
    | ||||||| | |||||||||  |||||||||    
T  2688882 atcaccctcatggatcccattgggtgaaatga 2688851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8794352 - 8794408
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||| ||| |||||||| ||||||| |||||||||||||||||||| ||||    
T  8794352 acctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgcca 8794408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 37330945 - 37331005
Alignment:
Q  567 agtgaaagtattatctgcattgctcactgaagaacttacatatttgcagtatctagttgtg 627  Q
    |||||||||||| |||||||| || |||||||||||||||||||||  |||||||| ||||    
T  37330945 agtgaaagtattctctgcattacttactgaagaacttacatatttggtgtatctagctgtg 37331005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44780121 - 44780177
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||||| |||||||||| |||||||||||    
T  44780121 acctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggcca 44780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 2203560 - 2203505
Alignment:
Q  2 cctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggcca 2203505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11819845 - 11819792
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||||    
T  11819845 acctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagg 11819792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33017283 - 33017238
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaata 46  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  33017283 acctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16852409 - 16852353
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||| || |||||||| ||| ||| || ||||||||||||||||||||||    
T  16852409 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggcca 16852353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19703494 - 19703550
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| |||  || || ||||||||||||||||||||||    
T  19703494 acctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggcca 19703550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5264611 - 5264557
Alignment:
Q  3 ctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| || |||||||| | | ||| |||||||||||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggcca 5264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 26377833 - 26377776
Alignment:
Q  189 cctcttacatcaatctactccacctctaaagaactcgaccccaaattctcattatgat 246  Q
    |||| ||||||| ||| |||||||| | |||||||||||||||| |||||||| ||||    
T  26377833 cctcctacatcagtctcctccacctttgaagaactcgaccccaagttctcattctgat 26377776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27750799 - 27750750
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccac 50  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||    
T  27750799 acctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 27750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33727880 - 33727933
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||||||||||| |||||||| ||||||||||  ||| || |||||||||||    
T  33727880 acctgagaccttgaggaggagcacacttccaagtctcaaacctataccactagg 33727933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 968431 - 968375
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||| || |||||||| ||| ||| || ||||||||||||||| ||||||    
T  968431 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggcca 968375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18540367 - 18540311
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| ||| || | ||| ||| || ||||||||||||||||||||||    
T  18540367 acctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggcca 18540311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35690071 - 35690127
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||  |||  | ||||||||||||||||||||||    
T  35690071 acctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggcca 35690127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27093368 - 27093424
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  27093368 acctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggcca 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 365886 - 366008
Alignment:
Q  196 catcaatctactccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccc 295  Q
    ||||||||| |||||||||| |||||||||||| | | ||||| || ||||| ||| ||||| | | ||||| |||| ||||||||||| ||||||||||    
T  365886 catcaatctcctccacctctgaagaactcgacctcgagttctcgttttgataaagagcttccat-gtatgttgactcttccaatgaacaggagaccaccc 365984  T
Q  296 tcttagatcccattaagtgaaatg 319  Q
    ||   ||||||||| |||||||||    
T  365985 tccgggatcccattgagtgaaatg 366008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8170741 - 8170685
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||||||  ||||||| ||| ||||||| |||||||||||||||||||||    
T  8170741 acctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggcca 8170685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 8536677 - 8536789
Alignment:
Q  207 tccacctctaaagaactcgaccccaaattctcattatgatagagatcttcccttgcatgttaactcctccaatgaacaagagaccaccctcttagatccc 306  Q
    ||||||||||||||||||||| || | |||| ||| ||||| | |  ||| | |  ||||| |||| |||||||||||||||| ||||||| | ||||||    
T  8536677 tccacctctaaagaactcgactccgagttcttattctgataaaaagtttctcatatatgttgactcttccaatgaacaagagatcaccctcctggatccc 8536776  T
Q  307 attaagtgaaatg 319  Q
    ||| ||| |||||    
T  8536777 attgagtaaaatg 8536789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16354899 - 16354955
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||| ||| |||||||| |||  || |||||||||||||||||||||||||    
T  16354899 acctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggcca 16354955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 53413014 - 53412962
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    |||||||||||||| |||||||| ||| ||| ||| |||||||||||||||||    
T  53413014 acctgagaccttgaggaggagcacactcccaggttacaagccaataccactag 53412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 32651447 - 32651501
Alignment:
Q  3 ctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||| ||||| |||||||| ||| ||| || ||||||||||||||||||||||    
T  32651447 ctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggcca 32651501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8075134 - 8075187
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactagg 54  Q
    |||||| ||||||| |||||||| ||| |||||| ||||||| |||||||||||    
T  8075134 acctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagg 8075187  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14186716 - 14186661
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| || |||| || ||||| ||||||||||||||||    
T  14186716 acctgagaccttgaggaggagcacac-tccaggtcccaagacaataccactaggcca 14186661  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14339679 - 14339623
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||| |||||||| ||| |||| | ||||||||||||||| ||||||    
T  14339679 acctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggcca 14339623  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27923050 - 27923106
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||  ||| |||||||| ||||||| || ||||||||||||||| ||||||    
T  27923050 acctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggcca 27923106  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30311375 - 30311319
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| |||  | ||||||| ||||||||||||||    
T  30311375 acctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggcca 30311319  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37788472 - 37788528
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| | | |||||||| |||||||||| |||||    
T  37788472 acctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggcca 37788528  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 94978 - 95034
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||    
T  94978 acctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggcca 95034  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 15743 - 15683
Alignment:
Q  260 tgcatgttaactcctccaatgaacaagagaccaccctcttagatcccattaagtgaaatga 320  Q
    |||||||| |||||||||||||||| ||||||||||||  || ||||||| | ||||||||    
T  15743 tgcatgttgactcctccaatgaacaggagaccaccctccaaggtcccattgaatgaaatga 15683  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6926 - 6982
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||| |||| |||||||| ||| || ||| ||||||||||||||||||||||    
T  6926 acctgagactttgaggaggagcacactccccagtcccaagccaataccactaggcca 6982  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15787 - 15840
Alignment:
Q  4 tgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    ||||||||||| |||||||||||| | || | ||||||||||||||| ||||||    
T  15787 tgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggcca 15840  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25354 - 25406
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactag 53  Q
    ||||||||||||||  ||||||| ||| ||||||  |||||||||||||||||    
T  25354 acctgagaccttgagaaggagcacactcccaagtctcaagccaataccactag 25406  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42527 - 42583
Alignment:
Q  1 acctgagaccttgaagaggagcatacttccaagttccaagccaataccactaggcca 57  Q
    |||||||||  ||| |||||||||||| |||  ||||||| ||||||||||||||||    
T  42527 acctgagactctgaggaggagcatactcccagattccaagtcaataccactaggcca 42583  T

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