View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11635_high_78 (Length: 230)
Name: NF11635_high_78
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_high_78 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 21532563 - 21532775
Alignment:
| Q |
17 |
cacaggttgttgaaggtaaggtacaagaagggaacaagactcgtgcacttggttttagagtatcttgattgtgatcttcatgattacattattgacgcag |
116 |
Q |
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| T |
21532563 |
cacaggttgttgaaggtaaggtacaagaagggaacaagactcgtgcacttggttttagagtatcttgattgtgatcttcatgattacattattgacgcag |
21532662 |
T |
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| Q |
117 |
aacgcttcaattcatctattaacaatccaatgactaaaaaggtaaataaggtttatctaagatattttgttgtaatcttttgtaattaatgtgatttttt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21532663 |
aacgcttcaattcatctattaacaatccaatgactaaaaaggtaaataaggtttatctaagatattttgttgtaatcttttgtaattaatgtgatttttt |
21532762 |
T |
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| Q |
217 |
atttaactttggt |
229 |
Q |
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||||||||||||| |
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| T |
21532763 |
atttaactttggt |
21532775 |
T |
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