View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11635_low_11 (Length: 581)
Name: NF11635_low_11
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 529; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 19 - 571
Target Start/End: Complemental strand, 8422427 - 8421875
Alignment:
| Q |
19 |
aaaattcccctaaatgagcacataaagggaaattagtgtatttggaaaacacattaaagcagtggaaagaaatacaatttatgcagcaaatttgacagaa |
118 |
Q |
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| T |
8422427 |
aaaattcccctaaatgagcacataaagggaaattagtgtatttggaaaacacattaaagcagtggaaagaaatacaatatatgcagcaaatttgacagaa |
8422328 |
T |
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| Q |
119 |
aaaatgtgaacaccaatagttcaaaaaacaggaaataaccccatccctattttccgtagtcgtcaacaaaagagagtgaaatttgacgaataaggtaaaa |
218 |
Q |
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| T |
8422327 |
aaaatgtgaacaccaatagttcaaaaaacaggaaataaccccatccctattttccatagtcgtcaacaaaagagagtgaaatttgacgaataaggtaaaa |
8422228 |
T |
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| Q |
219 |
taatcataccaacttcgttctggcagtaacaaattcgttgcaagcaacatcgggattaacttcctccttgctagaaggtgacttgaaataaccaactctg |
318 |
Q |
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| T |
8422227 |
taatcataccaacttcgttctggcagtaacaaattcgttgcaagcaacatcgggattaacttcctccttgctagaaggtgacttgaaataaccaactctg |
8422128 |
T |
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| Q |
319 |
gggctattattttccgtgtgtgcacgttttgttgaaaaagtgtttcgacaagctctttcttctccttcaacttcaaaaacggacgagacaccaggaccct |
418 |
Q |
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| T |
8422127 |
gggctattattttccgtgtgtgcacgttttgtcgaaaaagtgtttcgacaagctctttcttctccttcaacttcaaaaacggacgagacaccaggaccct |
8422028 |
T |
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| Q |
419 |
ttgtatggatgggatgtgattgaggccttccaataattgtgcagtcctcagagctgttatttttcaagttgaaaaaacttttggaaccattactagtcct |
518 |
Q |
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| T |
8422027 |
ttgtatggatgggaagtgattgaggccttccaataattgtgcagtcctcagagctgttagttttcaagttgaaaaaactgttggaaccattactagtcct |
8421928 |
T |
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| Q |
519 |
caagctgcttttcccatacatggatgttaacttagcttgcaccacttcctttg |
571 |
Q |
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| T |
8421927 |
caagctgcttttcccatacatggatgttaacttagcttgcaccacttcctttg |
8421875 |
T |
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