View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11635_low_31 (Length: 414)
Name: NF11635_low_31
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 16 - 318
Target Start/End: Original strand, 9248525 - 9248827
Alignment:
| Q |
16 |
ctaagaacaatagagatataaaaaattgacctggcactaggtacccttgtaggaacctcaggctgaaactcagaaggcaaaccaagaaaaccattgaatc |
115 |
Q |
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| T |
9248525 |
ctaagaacaatagagatataaaaaattgacctggcactaggtacccttgtaggaacctcaggctgaaactcagaaggcaaaccaagaaaaccattgaatc |
9248624 |
T |
|
| Q |
116 |
tatcaaaagtaacatgtgacacgtgtctcacttcagttggccagctaatatctaaggaagaaacatcctccctctccacactgcaagttacaatagattt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9248625 |
tatcaaaagtaacatgtgacacgtgtctcacttcagttggccagctaatatctaaggaagaaacatcctccctctccacactgcaagttacaatagattt |
9248724 |
T |
|
| Q |
216 |
cttaagagcagccataactatatccaatattgcaaactggttgtgatgattgttgttggatccttttgtaaattgtcttgaagcattgttgcttgaatat |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9248725 |
cttaagagcagccataactatatccaatattgcaaactggttttgatgattgttgttggatccttttgtaaattgtcttgaagcattgttgcttgaatat |
9248824 |
T |
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| Q |
316 |
atc |
318 |
Q |
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||| |
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| T |
9248825 |
atc |
9248827 |
T |
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