View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11635_low_37 (Length: 387)

Name: NF11635_low_37
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11635_low_37
NF11635_low_37
[»] chr4 (78 HSPs)
chr4 (17-363)||(20447864-20448220)
chr4 (17-200)||(52957766-52957949)
chr4 (17-200)||(45043564-45043747)
chr4 (29-200)||(19878646-19878817)
chr4 (17-200)||(52848030-52848213)
chr4 (17-200)||(1819560-1819743)
chr4 (30-200)||(41920298-41920468)
chr4 (17-200)||(37654408-37654591)
chr4 (17-200)||(40345323-40345506)
chr4 (24-247)||(44571848-44572073)
chr4 (24-200)||(19930712-19930888)
chr4 (17-235)||(27653639-27653855)
chr4 (17-187)||(2728374-2728544)
chr4 (17-184)||(2493116-2493283)
chr4 (17-200)||(49089462-49089644)
chr4 (17-187)||(53814473-53814643)
chr4 (17-197)||(29370604-29370784)
chr4 (17-200)||(24940877-24941061)
chr4 (29-244)||(52253799-52254017)
chr4 (24-200)||(54042166-54042342)
chr4 (17-200)||(49080453-49080635)
chr4 (24-200)||(29519508-29519684)
chr4 (23-200)||(50623081-50623259)
chr4 (42-238)||(34316182-34316378)
chr4 (42-200)||(10573156-10573313)
chr4 (17-197)||(18429991-18430170)
chr4 (17-174)||(38991739-38991894)
chr4 (24-189)||(42605582-42605746)
chr4 (17-181)||(56373551-56373717)
chr4 (42-200)||(30261257-30261414)
chr4 (42-200)||(19451206-19451370)
chr4 (42-181)||(47817755-47817894)
chr4 (17-200)||(40010848-40011033)
chr4 (42-245)||(50203031-50203229)
chr4 (17-187)||(28734609-28734779)
chr4 (41-185)||(46392063-46392205)
chr4 (42-184)||(8971056-8971198)
chr4 (42-187)||(45839648-45839793)
chr4 (42-197)||(52162107-52162259)
chr4 (42-200)||(41496203-41496360)
chr4 (42-200)||(34413548-34413706)
chr4 (24-121)||(39984894-39984991)
chr4 (17-200)||(40837128-40837311)
chr4 (46-197)||(6991268-6991417)
chr4 (42-181)||(11364243-11364381)
chr4 (91-200)||(37624554-37624662)
chr4 (42-199)||(56460082-56460241)
chr4 (98-200)||(25231173-25231274)
chr4 (42-159)||(44868253-44868369)
chr4 (102-200)||(22220421-22220518)
chr4 (78-188)||(25123764-25123873)
chr4 (42-175)||(620177-620312)
chr4 (98-187)||(21864441-21864529)
chr4 (98-187)||(21920302-21920390)
chr4 (98-245)||(4505290-4505435)
chr4 (128-187)||(39982114-39982173)
chr4 (42-200)||(47458388-47458544)
chr4 (42-184)||(44650902-44651043)
chr4 (98-200)||(52915600-52915701)
chr4 (98-187)||(7906054-7906142)
chr4 (98-200)||(51733552-51733653)
chr4 (124-200)||(31917954-31918030)
chr4 (106-200)||(27943611-27943705)
chr4 (42-179)||(36558301-36558440)
chr4 (42-113)||(30780021-30780093)
chr4 (119-200)||(24157183-24157264)
chr4 (98-175)||(38510303-38510379)
chr4 (42-117)||(44061073-44061149)
chr4 (135-234)||(44060972-44061071)
chr4 (144-189)||(50621290-50621335)
chr4 (127-244)||(30780218-30780326)
chr4 (119-161)||(50621236-50621278)
chr4 (42-95)||(19903204-19903257)
chr4 (125-200)||(33033076-33033156)
chr4 (212-244)||(7905923-7905955)
chr4 (212-244)||(40837080-40837112)
chr4 (212-244)||(47321352-47321384)
chr4 (212-244)||(50623293-50623325)
[»] chr5 (72 HSPs)
chr5 (17-244)||(2729758-2729985)
chr5 (17-245)||(39566136-39566364)
chr5 (17-244)||(42104035-42104263)
chr5 (17-197)||(3305981-3306161)
chr5 (17-187)||(14620466-14620636)
chr5 (17-200)||(34446000-34446182)
chr5 (17-179)||(14005911-14006073)
chr5 (17-200)||(6518974-6519158)
chr5 (29-200)||(26660753-26660923)
chr5 (29-200)||(26932346-26932516)
chr5 (24-200)||(21375629-21375806)
chr5 (38-200)||(21319305-21319465)
chr5 (17-187)||(8336379-8336551)
chr5 (24-197)||(42661919-42662091)
chr5 (17-244)||(27600354-27600575)
chr5 (42-197)||(36164888-36165042)
chr5 (17-200)||(39504720-39504906)
chr5 (17-162)||(39335175-39335321)
chr5 (42-197)||(27797782-27797933)
chr5 (24-197)||(29807293-29807469)
chr5 (43-187)||(11977599-11977742)
chr5 (42-187)||(34534371-34534514)
chr5 (17-179)||(39729978-39730127)
chr5 (17-200)||(4424975-4425155)
chr5 (17-133)||(42978045-42978161)
chr5 (42-244)||(15167009-15167210)
chr5 (87-200)||(13761555-13761668)
chr5 (42-200)||(38369871-38370027)
chr5 (42-187)||(843032-843173)
chr5 (42-200)||(14161898-14162056)
chr5 (78-200)||(34208926-34209052)
chr5 (42-187)||(38362135-38362279)
chr5 (98-200)||(10344986-10345087)
chr5 (121-241)||(7316985-7317105)
chr5 (17-178)||(34972622-34972775)
chr5 (98-200)||(3024985-3025086)
chr5 (42-200)||(7721094-7721250)
chr5 (42-169)||(13974302-13974429)
chr5 (98-197)||(4630866-4630964)
chr5 (42-116)||(4911112-4911187)
chr5 (98-200)||(25362854-25362955)
chr5 (45-197)||(7748898-7749049)
chr5 (106-185)||(21195392-21195470)
chr5 (102-200)||(43584434-43584532)
chr5 (42-168)||(1309356-1309481)
chr5 (42-116)||(7736455-7736529)
chr5 (123-200)||(7579947-7580024)
chr5 (121-187)||(35765976-35766042)
chr5 (123-200)||(4911228-4911305)
chr5 (42-133)||(21634177-21634266)
chr5 (42-133)||(21642424-21642513)
chr5 (42-154)||(28591620-28591735)
chr5 (38-95)||(13761823-13761880)
chr5 (140-200)||(24280991-24281051)
chr5 (140-200)||(24381161-24381221)
chr5 (42-146)||(41645292-41645391)
chr5 (49-94)||(7579598-7579643)
chr5 (123-247)||(9066501-9066625)
chr5 (123-187)||(36073708-36073772)
chr5 (121-172)||(32158586-32158637)
chr5 (212-244)||(39804216-39804248)
chr5 (123-185)||(891091-891154)
chr5 (123-197)||(40776653-40776728)
chr5 (123-161)||(7736226-7736264)
chr5 (210-244)||(29653678-29653712)
chr5 (155-185)||(31041940-31041970)
chr5 (210-244)||(39335331-39335365)
chr5 (84-197)||(24281098-24281209)
chr5 (84-197)||(24381002-24381113)
chr5 (212-244)||(15400381-15400413)
chr5 (212-244)||(33693939-33693971)
chr5 (155-199)||(42978176-42978220)
[»] chr1 (81 HSPs)
chr1 (24-200)||(15823032-15823208)
chr1 (17-244)||(32806908-32807135)
chr1 (17-244)||(9915397-9915625)
chr1 (23-200)||(44108597-44108776)
chr1 (24-200)||(49468688-49468864)
chr1 (17-244)||(31491740-31491967)
chr1 (17-187)||(50094240-50094411)
chr1 (37-244)||(48025244-48025451)
chr1 (17-187)||(10842791-10842961)
chr1 (16-200)||(5463573-5463757)
chr1 (42-244)||(29567850-29568051)
chr1 (23-184)||(31798603-31798765)
chr1 (16-200)||(46045971-46046155)
chr1 (17-187)||(24611489-24611660)
chr1 (29-187)||(46286800-46286958)
chr1 (17-187)||(52125106-52125276)
chr1 (17-200)||(35847906-35848086)
chr1 (24-200)||(48009008-48009184)
chr1 (17-183)||(43759347-43759513)
chr1 (17-200)||(15573605-15573794)
chr1 (42-187)||(27209000-27209144)
chr1 (29-200)||(1740622-1740794)
chr1 (17-187)||(25151826-25151991)
chr1 (49-187)||(34110538-34110676)
chr1 (42-179)||(25560868-25561004)
chr1 (42-199)||(26595065-26595221)
chr1 (23-199)||(49426395-49426565)
chr1 (78-244)||(46554754-46554917)
chr1 (42-200)||(18794538-18794694)
chr1 (79-237)||(26755181-26755338)
chr1 (17-199)||(7214009-7214185)
chr1 (42-200)||(7191202-7191360)
chr1 (42-186)||(16757194-16757333)
chr1 (42-199)||(49900752-49900910)
chr1 (17-179)||(52066260-52066420)
chr1 (42-163)||(31699285-31699405)
chr1 (98-244)||(50249264-50249409)
chr1 (108-197)||(24884416-24884505)
chr1 (99-200)||(38531349-38531450)
chr1 (42-197)||(8895011-8895165)
chr1 (24-183)||(43358191-43358336)
chr1 (98-197)||(25487089-25487187)
chr1 (102-244)||(13408320-13408462)
chr1 (42-181)||(2610828-2610964)
chr1 (121-200)||(12591156-12591235)
chr1 (42-189)||(8989635-8989777)
chr1 (17-102)||(38530809-38530894)
chr1 (121-200)||(34047309-34047388)
chr1 (91-197)||(14373458-14373563)
chr1 (98-200)||(34032132-34032233)
chr1 (119-200)||(44557116-44557197)
chr1 (119-187)||(40717368-40717436)
chr1 (128-200)||(44258588-44258660)
chr1 (42-199)||(51244831-51244988)
chr1 (121-200)||(26352155-26352234)
chr1 (89-200)||(39477751-39477860)
chr1 (98-187)||(27720969-27721057)
chr1 (126-239)||(30292899-30293012)
chr1 (99-200)||(52024287-52024387)
chr1 (42-133)||(5044-5134)
chr1 (42-113)||(5225821-5225892)
chr1 (133-187)||(14593406-14593460)
chr1 (98-179)||(49402923-49403003)
chr1 (42-169)||(28538233-28538360)
chr1 (78-197)||(33622396-33622515)
chr1 (119-187)||(46271389-46271457)
chr1 (42-116)||(46271018-46271093)
chr1 (50-175)||(9092618-9092739)
chr1 (98-200)||(12484680-12484781)
chr1 (126-200)||(52706880-52706953)
chr1 (102-179)||(41857333-41857409)
chr1 (140-200)||(24483386-24483446)
chr1 (157-200)||(38947653-38947696)
chr1 (42-89)||(44557065-44557112)
chr1 (123-185)||(39125661-39125723)
chr1 (212-245)||(13408245-13408278)
chr1 (212-244)||(12002200-12002232)
chr1 (212-244)||(28200391-28200423)
chr1 (42-74)||(33694418-33694450)
chr1 (209-245)||(48025163-48025199)
chr1 (212-244)||(49402830-49402862)
[»] chr7 (77 HSPs)
chr7 (17-244)||(1741946-1742172)
chr7 (23-245)||(22297951-22298171)
chr7 (17-200)||(13405097-13405280)
chr7 (24-249)||(37815673-37815898)
chr7 (17-200)||(45948600-45948783)
chr7 (17-200)||(31418483-31418666)
chr7 (17-200)||(23935420-23935602)
chr7 (17-200)||(27947471-27947654)
chr7 (17-200)||(35777817-35778000)
chr7 (29-200)||(42879916-42880087)
chr7 (17-200)||(24680126-24680309)
chr7 (17-242)||(41137685-41137909)
chr7 (17-244)||(44453089-44453314)
chr7 (17-187)||(48684734-48684904)
chr7 (17-200)||(29530905-29531088)
chr7 (42-245)||(40339412-40339614)
chr7 (17-200)||(27935765-27935948)
chr7 (42-197)||(10476137-10476291)
chr7 (17-200)||(36807933-36808115)
chr7 (24-200)||(45933566-45933737)
chr7 (47-200)||(48843550-48843703)
chr7 (42-200)||(24133124-24133283)
chr7 (42-189)||(28289224-28289370)
chr7 (42-189)||(29636222-29636369)
chr7 (42-189)||(21752107-21752253)
chr7 (42-200)||(40753425-40753581)
chr7 (17-133)||(23155432-23155547)
chr7 (42-187)||(37490795-37490943)
chr7 (86-244)||(8603928-8604086)
chr7 (42-200)||(33939729-33939887)
chr7 (42-200)||(19104997-19105154)
chr7 (46-200)||(1031153-1031306)
chr7 (98-200)||(42285906-42286007)
chr7 (42-179)||(21819303-21819438)
chr7 (42-184)||(6563414-6563551)
chr7 (17-96)||(10599465-10599544)
chr7 (98-197)||(25440873-25440971)
chr7 (98-244)||(10599168-10599313)
chr7 (98-200)||(715915-716016)
chr7 (98-244)||(12977738-12977883)
chr7 (42-200)||(45499820-45499980)
chr7 (85-197)||(30312459-30312570)
chr7 (42-165)||(8293064-8293186)
chr7 (102-184)||(37502333-37502414)
chr7 (102-244)||(34012117-34012256)
chr7 (79-165)||(16564799-16564885)
chr7 (79-165)||(16600777-16600863)
chr7 (98-187)||(6747238-6747325)
chr7 (42-143)||(47461370-47461469)
chr7 (121-200)||(34274792-34274871)
chr7 (98-187)||(18270588-18270677)
chr7 (98-200)||(18292333-18292434)
chr7 (98-244)||(31929912-31930057)
chr7 (98-200)||(44567093-44567194)
chr7 (17-82)||(7795213-7795278)
chr7 (57-200)||(42753706-42753845)
chr7 (47-134)||(7759324-7759410)
chr7 (42-187)||(31196580-31196723)
chr7 (99-184)||(33682543-33682627)
chr7 (42-95)||(34012559-34012612)
chr7 (121-187)||(40927174-40927237)
chr7 (153-244)||(32501855-32501946)
chr7 (65-241)||(4268568-4268744)
chr7 (139-197)||(39557323-39557381)
chr7 (139-200)||(24780398-24780459)
chr7 (42-105)||(7335372-7335436)
chr7 (42-110)||(25055869-25055937)
chr7 (145-200)||(2297036-2297091)
chr7 (42-134)||(7899993-7900084)
chr7 (42-102)||(19303390-19303450)
chr7 (42-94)||(24780314-24780366)
chr7 (123-155)||(25055809-25055841)
chr7 (212-246)||(34274992-34275026)
chr7 (140-241)||(8334365-8334466)
chr7 (98-159)||(31883823-31883883)
chr7 (214-246)||(33845335-33845367)
chr7 (212-244)||(37815933-37815965)
[»] chr2 (85 HSPs)
chr2 (17-244)||(12342047-12342274)
chr2 (17-200)||(29396652-29396835)
chr2 (17-244)||(441203-441431)
chr2 (17-244)||(4132978-4133203)
chr2 (17-200)||(38926604-38926787)
chr2 (17-244)||(29808768-29808994)
chr2 (17-237)||(6220376-6220596)
chr2 (36-187)||(45081891-45082042)
chr2 (23-200)||(13561992-13562168)
chr2 (29-200)||(32227995-32228166)
chr2 (17-245)||(16807489-16807716)
chr2 (17-245)||(16846770-16846997)
chr2 (37-200)||(4288703-4288866)
chr2 (17-200)||(25383457-25383639)
chr2 (41-183)||(1423206-1423348)
chr2 (17-200)||(12393891-12394076)
chr2 (42-200)||(18719430-18719587)
chr2 (24-187)||(30855116-30855279)
chr2 (42-200)||(37038767-37038921)
chr2 (62-244)||(18579118-18579302)
chr2 (24-200)||(8789409-8789581)
chr2 (37-197)||(42004892-42005051)
chr2 (24-180)||(8774074-8774226)
chr2 (42-200)||(8540036-8540194)
chr2 (17-200)||(36106375-36106554)
chr2 (29-188)||(42753755-42753916)
chr2 (42-200)||(12565978-12566135)
chr2 (42-200)||(4658229-4658388)
chr2 (42-200)||(36685739-36685895)
chr2 (17-147)||(42743080-42743209)
chr2 (45-185)||(43480870-43481011)
chr2 (42-200)||(43971502-43971644)
chr2 (42-168)||(19164387-19164509)
chr2 (78-200)||(7028846-7028967)
chr2 (17-119)||(19636587-19636689)
chr2 (17-119)||(19835180-19835282)
chr2 (98-200)||(45301763-45301864)
chr2 (91-200)||(43427334-43427442)
chr2 (99-187)||(27964425-27964512)
chr2 (17-128)||(34546120-34546232)
chr2 (98-189)||(16463086-16463176)
chr2 (67-200)||(29411694-29411826)
chr2 (45-179)||(11132569-11132703)
chr2 (42-133)||(33055956-33056046)
chr2 (98-200)||(35799201-35799301)
chr2 (42-143)||(10195730-10195830)
chr2 (42-187)||(40608603-40608745)
chr2 (98-200)||(4051757-4051859)
chr2 (98-185)||(17695879-17695965)
chr2 (98-185)||(22620388-22620474)
chr2 (45-200)||(33482230-33482384)
chr2 (124-244)||(34546410-34546529)
chr2 (78-200)||(7042220-7042341)
chr2 (42-138)||(27726417-27726510)
chr2 (123-200)||(36177974-36178051)
chr2 (98-179)||(45423637-45423717)
chr2 (123-200)||(4469499-4469576)
chr2 (98-199)||(5717512-5717611)
chr2 (123-200)||(35046516-35046593)
chr2 (121-197)||(7874720-7874795)
chr2 (17-117)||(18717157-18717257)
chr2 (42-135)||(7872774-7872866)
chr2 (98-187)||(11188546-11188634)
chr2 (122-187)||(14285949-14286014)
chr2 (123-187)||(7644657-7644721)
chr2 (140-200)||(16792481-16792541)
chr2 (42-102)||(27964222-27964282)
chr2 (43-99)||(34455790-34455846)
chr2 (120-179)||(15083227-15083286)
chr2 (42-96)||(11188247-11188301)
chr2 (98-200)||(28072565-28072669)
chr2 (146-200)||(17703017-17703071)
chr2 (93-200)||(777768-777879)
chr2 (46-99)||(27726542-27726595)
chr2 (50-147)||(19469575-19469673)
chr2 (100-187)||(9391614-9391700)
chr2 (130-200)||(10195572-10195642)
chr2 (147-200)||(14833837-14833890)
chr2 (98-200)||(27986034-27986137)
chr2 (42-76)||(14833757-14833791)
chr2 (212-249)||(14286128-14286165)
chr2 (151-188)||(35046609-35046646)
chr2 (156-200)||(9366230-9366274)
chr2 (212-244)||(12342302-12342334)
chr2 (212-244)||(42970097-42970129)
[»] chr8 (55 HSPs)
chr8 (17-244)||(4760531-4760756)
chr8 (17-244)||(39698638-39698864)
chr8 (17-244)||(39463213-39463438)
chr8 (29-246)||(9880485-9880701)
chr8 (24-250)||(17920904-17921131)
chr8 (17-200)||(40228572-40228755)
chr8 (17-197)||(43084599-43084779)
chr8 (17-200)||(4989476-4989659)
chr8 (17-200)||(43448714-43448897)
chr8 (17-250)||(31693591-31693826)
chr8 (30-183)||(31899233-31899386)
chr8 (24-244)||(9304613-9304832)
chr8 (29-187)||(29025733-29025888)
chr8 (17-200)||(44713532-44713715)
chr8 (17-200)||(7839456-7839639)
chr8 (42-200)||(9812171-9812328)
chr8 (42-200)||(6374412-6374568)
chr8 (42-197)||(34156535-34156690)
chr8 (70-189)||(19438245-19438365)
chr8 (71-189)||(19574395-19574514)
chr8 (42-187)||(5295403-5295548)
chr8 (42-197)||(514875-515032)
chr8 (42-244)||(13367946-13368147)
chr8 (24-169)||(5790625-5790772)
chr8 (42-180)||(34796679-34796813)
chr8 (42-200)||(14234213-14234373)
chr8 (42-185)||(45358892-45359034)
chr8 (42-179)||(13496254-13496393)
chr8 (51-196)||(29312197-29312344)
chr8 (53-200)||(6116020-6116160)
chr8 (102-200)||(15160504-15160601)
chr8 (114-179)||(35356326-35356391)
chr8 (42-147)||(15750327-15750435)
chr8 (42-179)||(41679338-41679467)
chr8 (17-96)||(36669766-36669845)
chr8 (121-200)||(37559609-37559688)
chr8 (121-200)||(40362433-40362512)
chr8 (42-135)||(40399875-40399967)
chr8 (42-200)||(15227565-15227725)
chr8 (98-200)||(39765914-39766014)
chr8 (44-187)||(31233939-31234081)
chr8 (98-187)||(17655918-17656006)
chr8 (121-200)||(396290-396369)
chr8 (42-138)||(42179155-42179250)
chr8 (139-187)||(43974885-43974933)
chr8 (42-116)||(43970049-43970123)
chr8 (121-184)||(36921371-36921434)
chr8 (104-200)||(43724379-43724475)
chr8 (124-177)||(44342865-44342918)
chr8 (42-200)||(2375844-2375996)
chr8 (135-187)||(40400066-40400118)
chr8 (135-199)||(40400441-40400505)
chr8 (209-244)||(36915570-36915605)
chr8 (42-112)||(43561408-43561478)
chr8 (212-245)||(9022604-9022637)
[»] scaffold0110 (1 HSPs)
scaffold0110 (24-244)||(24719-24939)
[»] chr3 (72 HSPs)
chr3 (17-200)||(44676219-44676402)
chr3 (17-200)||(45213691-45213874)
chr3 (17-200)||(47895313-47895496)
chr3 (17-200)||(38016373-38016555)
chr3 (16-200)||(2458005-2458190)
chr3 (17-200)||(23525285-23525468)
chr3 (29-244)||(51397964-51398179)
chr3 (17-245)||(33194000-33194227)
chr3 (29-244)||(41287477-41287694)
chr3 (23-200)||(30426298-30426476)
chr3 (29-245)||(35557734-35557955)
chr3 (17-200)||(11393543-11393726)
chr3 (29-200)||(50088297-50088468)
chr3 (17-200)||(53200650-53200832)
chr3 (17-187)||(30431131-30431301)
chr3 (17-183)||(36460821-36460986)
chr3 (24-200)||(31853538-31853714)
chr3 (17-200)||(47137961-47138146)
chr3 (17-200)||(3152776-3152958)
chr3 (29-187)||(38363796-38363960)
chr3 (42-200)||(30315307-30315465)
chr3 (17-200)||(41850388-41850562)
chr3 (24-200)||(32492158-32492333)
chr3 (64-187)||(36729826-36729949)
chr3 (42-241)||(36844737-36844935)
chr3 (42-187)||(38140961-38141105)
chr3 (17-169)||(45566828-45566980)
chr3 (37-197)||(33024289-33024449)
chr3 (42-197)||(9189430-9189584)
chr3 (42-185)||(19373599-19373741)
chr3 (42-200)||(30934804-30934958)
chr3 (42-200)||(48903284-48903441)
chr3 (17-120)||(39358998-39359101)
chr3 (42-200)||(42071983-42072140)
chr3 (59-200)||(48901718-48901858)
chr3 (17-145)||(13756842-13756970)
chr3 (105-200)||(39356883-39356978)
chr3 (42-187)||(40487839-40487983)
chr3 (91-244)||(50646154-50646306)
chr3 (44-172)||(27067634-27067759)
chr3 (42-200)||(50346624-50346780)
chr3 (37-169)||(51481964-51482096)
chr3 (121-200)||(4758989-4759068)
chr3 (50-187)||(7230897-7231035)
chr3 (17-148)||(36381341-36381474)
chr3 (98-200)||(42571580-42571681)
chr3 (98-200)||(50038222-50038323)
chr3 (102-244)||(4392150-4392291)
chr3 (98-200)||(19115385-19115485)
chr3 (78-200)||(22857088-22857209)
chr3 (98-200)||(31583485-31583586)
chr3 (102-200)||(11019879-11019978)
chr3 (42-199)||(8817139-8817296)
chr3 (98-200)||(42886749-42886848)
chr3 (42-170)||(40717665-40717793)
chr3 (24-117)||(45518460-45518553)
chr3 (17-81)||(36729741-36729805)
chr3 (66-200)||(47823466-47823603)
chr3 (142-189)||(52654313-52654360)
chr3 (33-102)||(39168802-39168871)
chr3 (29-70)||(45391939-45391980)
chr3 (144-200)||(23208387-23208441)
chr3 (118-169)||(45460692-45460743)
chr3 (42-116)||(3985932-3986006)
chr3 (212-245)||(37225761-37225794)
chr3 (212-244)||(4476274-4476306)
chr3 (212-244)||(31290886-31290918)
chr3 (212-244)||(42740431-42740463)
chr3 (212-244)||(42886947-42886979)
chr3 (152-200)||(51324143-51324191)
chr3 (212-244)||(53560875-53560907)
chr3 (125-197)||(54403341-54403413)
[»] chr6 (50 HSPs)
chr6 (37-200)||(234032-234195)
chr6 (24-244)||(24163693-24163912)
chr6 (17-187)||(19674991-19675159)
chr6 (17-200)||(23259297-23259480)
chr6 (23-187)||(29713384-29713548)
chr6 (17-164)||(1134959-1135106)
chr6 (42-200)||(9940646-9940803)
chr6 (39-200)||(31443439-31443601)
chr6 (42-183)||(3988741-3988881)
chr6 (42-187)||(12459316-12459460)
chr6 (17-197)||(24555899-24556080)
chr6 (42-200)||(577059-577217)
chr6 (64-235)||(32193665-32193835)
chr6 (42-187)||(13503841-13503990)
chr6 (44-200)||(18737087-18737245)
chr6 (17-135)||(10540448-10540566)
chr6 (41-187)||(17552243-17552387)
chr6 (93-187)||(12063558-12063652)
chr6 (42-187)||(12322881-12323026)
chr6 (17-124)||(10520362-10520469)
chr6 (42-194)||(13011345-13011495)
chr6 (121-244)||(29399900-29400023)
chr6 (102-181)||(34513660-34513739)
chr6 (42-133)||(1502750-1502840)
chr6 (102-200)||(4850553-4850650)
chr6 (123-200)||(10520717-10520794)
chr6 (44-133)||(16128006-16128094)
chr6 (42-133)||(17828348-17828438)
chr6 (42-116)||(20226218-20226292)
chr6 (42-116)||(22120202-22120276)
chr6 (120-200)||(31233700-31233780)
chr6 (42-197)||(12588527-12588680)
chr6 (126-244)||(10540590-10540707)
chr6 (87-136)||(17246678-17246727)
chr6 (45-96)||(8957869-8957920)
chr6 (45-96)||(8961437-8961488)
chr6 (47-169)||(17267609-17267731)
chr6 (123-187)||(32429295-32429359)
chr6 (121-171)||(19689357-19689407)
chr6 (42-112)||(21271400-21271469)
chr6 (50-104)||(32619830-32619884)
chr6 (126-187)||(8030653-8030714)
chr6 (123-200)||(21272180-21272257)
chr6 (139-199)||(1502833-1502893)
chr6 (42-76)||(32193931-32193965)
chr6 (141-175)||(3847704-3847738)
chr6 (78-183)||(19600436-19600540)
chr6 (146-183)||(24911432-24911469)
chr6 (212-244)||(23936495-23936527)
chr6 (212-244)||(29713574-29713606)
[»] scaffold0294 (1 HSPs)
scaffold0294 (24-187)||(3483-3646)
[»] scaffold0565 (2 HSPs)
scaffold0565 (30-200)||(9627-9796)
scaffold0565 (42-200)||(9952-10110)
[»] scaffold0015 (1 HSPs)
scaffold0015 (24-244)||(21060-21280)
[»] scaffold0048 (1 HSPs)
scaffold0048 (17-200)||(62631-62814)
[»] scaffold0502 (1 HSPs)
scaffold0502 (42-197)||(569-723)
[»] scaffold0182 (1 HSPs)
scaffold0182 (42-187)||(18252-18396)
[»] scaffold0078 (1 HSPs)
scaffold0078 (79-200)||(1446-1568)
[»] scaffold0983 (1 HSPs)
scaffold0983 (42-187)||(684-828)
[»] scaffold0026 (1 HSPs)
scaffold0026 (42-179)||(4160-4296)
[»] scaffold0300 (1 HSPs)
scaffold0300 (42-187)||(4576-4720)
[»] scaffold0332 (1 HSPs)
scaffold0332 (98-200)||(3864-3965)
[»] scaffold2107 (1 HSPs)
scaffold2107 (121-197)||(589-665)
[»] scaffold0136 (2 HSPs)
scaffold0136 (42-138)||(9604-9700)
scaffold0136 (127-169)||(9474-9516)


Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 17 - 363
Target Start/End: Complemental strand, 20448220 - 20447864
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20448220 aataaagtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaataatactttggaagtagtgta 20448121  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa----------nnnnnn 206  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||| ||||||                    
T  20448120 acatagtattaattgaagggtataattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaacaattttttttagcacttt 20448021  T
Q  207 nnggttaaaacgacacttattttaaaacggagggagtacaaataaacagacccgtccgaatgtacatgtcctttgctagttagaatcataccccaaattg 306  Q
       |||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20448020 tttgttaaaacaacactcattttaaaacagagggagtacaaataaacggacccgtccgagtgtacatgtcctttgctagttagaatcataccccaaattg 20447921  T
Q  307 atagatatatgacattattacttgactactctaaacaattttgttgattgaaagagg 363  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  20447920 atagatatattacattattactttactactctaaacaattttgttgattgaaagagg 20447864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 52957766 - 52957949
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  52957766 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 52957865  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  52957866 acataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 52957949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 45043564 - 45043747
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  45043564 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgta 45043663  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||    
T  45043664 acatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaa 45043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 19878817 - 19878646
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  19878817 aaatgtcgtagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtataaa 19878718  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  19878717 ttgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttcaaacaa 19878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 52848030 - 52848213
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  52848030 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggcttgtttttcattaaagaaaaaataatactttggaagtagtgta 52848129  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||    
T  52848130 acataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaattgaaagtgacattcattttaaaacaa 52848213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 1819743 - 1819560
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||| ||||||||||    
T  1819743 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatactttgaaagtagtgta 1819644  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||    
T  1819643 acatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaagtgacattcattttgaaacaa 1819560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 41920298 - 41920468
Alignment:
Q  30 aatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaat 129  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  41920298 aatgtaatagcaattttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtggaacataatattaat 41920397  T
Q  130 tgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  41920398 tgaagggtataattgaaaagaaaaagttattattgctttggaaactgaaaatgacatttattttaaaacaa 41920468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 37654591 - 37654408
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgatttt-cattaaagaaaaaattatactttggaagtagtgt 115  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  37654591 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgttttttcattaaagaaaaaataatactttggaagtagtgt 37654492  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||| | ||||||||||    
T  37654491 aacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactg-aattgacattcattttaaaacaa 37654408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 40345323 - 40345506
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |  |||||||||||||||||||    
T  40345323 aataaagtagtcaaatgtcatatcaattttaccaaattatcctaatcaactattggtttgttttttattaaagaaaatacaatactttggaagtagtgta 40345422  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||    
T  40345423 acatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 40345506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 44571848 - 44572073
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |    
T  44571848 tagtcaaatgtcatagtaattttaccaaattatcttaatcaactattggtttatttttcattaaagaaaaaataatactttggaagtagtgtaacatatt 44571947  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa--nnnnnnnnggttaaaacgaca 221  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||           | ||||||||||    
T  44571948 attaattgaagggtacaattgaaaagaaaaagtttttattgcattggaaactgaaagcgacattcattttaaaacaattttttttttagctaaaacgaca 44572047  T
Q  222 cttattttaaaacggagggagtacaa 247  Q
    || |||||||||||||||||||||||    
T  44572048 ctcattttaaaacggagggagtacaa 44572073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 19930888 - 19930712
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||| |    
T  19930888 tagttaaatgtcatagcaattttatcaaattatcttaatcaactattggtttgtttttcattaaaggaaaaataatattttggaagtagtgtaacataat 19930789  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| | ||| ||||||    
T  19930788 attaattgaagggtacaattgaaaagaaaaagttattattgcatcggaaattgaaagtgacattcattttgaaacaa 19930712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 27653855 - 27653639
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||| |||||||||||||||    
T  27653855 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattgagttgtttttcattaaagaaaaaataatattttggaagtagtgta 27653756  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||||||||||||| ||||||||  |||||||||| |||||||| |||||| ||| ||||||||| ||||||||||         |||||||    
T  27653755 acatagtattaattgaagggtacaattgaaa--aaaaagttatcattgcattagaaactaaaaatgacatttattttaaaacaatttattttagttaaaa 27653658  T
Q  217 cgacacttattttaaaacg 235  Q
    ||||||| |||||||||||    
T  27653657 cgacactcattttaaaacg 27653639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 2728374 - 2728544
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| ||    
T  2728374 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtgtgtttttcattaaagaaaaaataatactttggaagtagtata 2728473  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||| |||||||    
T  2728474 acatagtattaactgaagggtactgttgaaaagaaaaagttattattgcattggaaactgaaaatgacatt 2728544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 2493283 - 2493116
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| || |||| ||||||||| ||||    
T  2493283 aataaagtagtcaaatgtcatagcaattttaccagattatcctaatcaactattgggttgtttttcattaaagaaaagataataccttggaagtaatgta 2493184  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  2493183 acatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaaatgaaagtgac 2493116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 49089644 - 49089462
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  49089644 aataatgtagtcaaatatcataacaattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 49089545  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||| | ||| ||||||    
T  49089544 acatagtactaattgaagggtataattggaaa-aaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaa 49089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 53814473 - 53814643
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||| ||||||||||    
T  53814473 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaattattgatttgtttttcattaaagaaaaaataatactttgaaagtagtgta 53814572  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||||||||  |||| |||||||||||    
T  53814573 acatagtattaattgaagggtacaattaaaaataaaaagttattattgcattgttaactaaaagtgacatt 53814643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 29370784 - 29370604
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  29370784 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaaga-aaaataatactttggaagtagtgta 29370686  T
Q  117 acatagtattaattg-aagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |  |||||||||||| |||| || ||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  29370685 atttagtattaattgaaaggatacaattgaaaagaaaaagttattattatattgaaaactgaaagtgacatttattttaaaa 29370604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 24941061 - 24940877
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgt 115  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || |||  |||||||||    
T  24941061 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatatttttaaagtagtgt 24940962  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||| | ||| ||||||    
T  24940961 aacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaatcgaaaatgacattcattttgaaacaa 24940877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 52254017 - 52253799
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  52254017 aaatgtcatagtaattttaccaaattatcctaatcaactattggtctgtttttcattaaagaaaaaataataccttggaagtagtggaacataatattaa 52253918  T
Q  129 ttgaagggtataattg---aaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacactta 225  Q
    |||||||||| |||||   ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||        || |||||||||| | |    
T  52253917 ttgaagggtacaattgaaaaaaagaagaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggctaaaacgacattca 52253818  T
Q  226 ttttaaaacggagggagta 244  Q
    |||| ||||||||||||||    
T  52253817 ttttgaaacggagggagta 52253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 54042166 - 54042342
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||    
T  54042166 tagtcaaatgtcgtagcaattttatcaaattatcataatcaactattggtttgtttttcattaaagaaataataatactttggaagtagtgtaacatggt 54042265  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||| ||||||||||||||| |||||||| |||||||||| |||||||||||| | ||||||||||    
T  54042266 attaattgaaaggtacaattgaaaagaaaaaattattattacattggaaaccgaaagtgacattcattttaaaacaa 54042342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 49080453 - 49080635
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||    
T  49080453 aataaagtagtcaaatgtcatagtaattttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatacttcggaagtagtgta 49080552  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||| | ||| ||||||    
T  49080553 acataatattaattgaagggtacaattgaaaataaaaagttattattgcatt-aaaactgaaagtgacattcattttgaaacaa 49080635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 29519508 - 29519684
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||| ||||| ||||||||||||||||  ||||| ||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  29519508 tagtcaaatatcataacaattttaccaaattactctaataaactattggttcgtttttcattaaagaaaaaataatactttagaagtagtgtaacatagt 29519607  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  29519608 attaattgaaggatacaattgaaaataaaaagttattattgcattggaaactaaaagtgacatttattttgaaacaa 29519684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 50623259 - 50623081
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacata 121  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |||||||||||||||     
T  50623259 gtagtcaaatgtcatatcaattttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttagaagtagtgtaacatt 50623160  T
Q  122 gtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||  | ||||||||||    
T  50623159 atattaattgaagggtataattgaaaagaaaaagttattattgcattgaaaactaaaaataacatacattttaaaacaa 50623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 34316378 - 34316182
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||| ||| || |||||||||||||| || ||| |||||||||||||||| ||    
T  34316378 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaagaataatcctttggaagtagtgcaatataatattaattgaagggtacaa 34316279  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggag 238  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| ||          ||||||||||||| ||||||||||||||    
T  34316278 ttgaaaataaaaaattattattgcattggaaactgaaagtgacatttattttaaaataattttgtttaattaaaacgacactcattttaaaacggag 34316182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 10573156 - 10573313
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| ||| | |||||||||||||||||||| ||    
T  10573156 attttaccaaattatcctaatcaactattgatttgattttcattaatgaaaaaataatactttggaagtattgt-atatagtattaattgaagggtacaa 10573254  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| | ||| ||||||    
T  10573255 ttgaaaagaaaaagttattattgcattggaaactaaaaatgacattcattttgaaacaa 10573313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 18430170 - 18429991
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||| | ||||||||||    
T  18430170 aataaagtagtcaaatgtcataacaattttaccaaattatcataatcaactattcgtttgtttttctttaaagaaaaaataatacttagaaagtagtgta 18430071  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | ||| ||| |||||| ||||| | |||||||    
T  18430070 acatagtattaattgaagggtacaattgaaaagaaaaagttattattg-aatgggaaccgaaagtaacattcattttaaaa 18429991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 38991739 - 38991894
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||| |||||||| ||||||||||    
T  38991739 aataaagtagttaaatgtcataacaattttaccaaattatcctaatcaa--attggtttgtttttcattcaagaaaaaataatactttgaaagtagtgta 38991836  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaac 174  Q
    ||||| ||||||||||||  || |||| ||||||||||||||||||||||||||||||    
T  38991837 acataatattaattgaagaatacaattcaaaagaaaaagttattattgcattggaaac 38991894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 42605746 - 42605582
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||| |    
T  42605746 tagtcaaatgtcatagcaattttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtaatgtaacataat 42605647  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgca-ttggaaactgaaagtgacattta 189  Q
    ||||||||||||||| |||||||||||||||   ||||||||| ||  ||||||||| |||||||||    
T  42605646 attaattgaagggtacaattgaaaagaaaaa--aattattgcatttaaaaactgaaaatgacattta 42605582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 56373551 - 56373717
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||  |||| ||||||||||||||||||| |||||||||||||||||||    
T  56373551 aataaagtagtcaaatgtcgtagcaattttaccaaattatcctaatcaacaattattttgtttttcattaaagaaaaaataatactttggaagtagtgta 56373650  T
Q  117 ac--atagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagt 181  Q
    ||  ||| |||||||||||||||| ||||||||||||||| ||||||||  ||| ||||||||||||    
T  56373651 acatataatattaattgaagggtacaattgaaaagaaaaaattattattatattagaaactgaaagt 56373717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 30261414 - 30261257
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||  |||||||||||||||||||| ||    
T  30261414 attttaccaaattattttaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtaatgtat-atagtattaattgaagggtacaa 30261316  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| | ||| ||||||    
T  30261315 ttgaaaagaaaacattattattgcattggaaactgaaagtgacattcattttgaaacaa 30261257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 19451206 - 19451370
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta------acatagtattaattgaagg 135  Q
    ||||||||||| || ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||      | || ||||||||||||||    
T  19451206 attttaccaaaatagcctaatcaattattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatactatatggtattaattgaagg 19451305  T
Q  136 gtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  19451306 gtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 19451370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 47817894 - 47817755
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||||||| ||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||  |||||||||||||||||||| |    
T  47817894 attttaccaatttatcataatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtat-atagtattaattgaagggtaca 47817796  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagt 181  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  47817795 attgaaaagaaaaagttattattgcattgcaaactgaaagt 47817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 40010848 - 40011033
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgt 115  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||| |||| |||  ||||||| ||||||| ||| |||  ||| |||||    
T  40010848 aataaagtagtcaaatgtcatagcaattttacaaaattatcctaattaactattgatttgttttatattaaagaaaaaaataatatttttaaagcagtgt 40010947  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaa-aagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||    
T  40010948 aacatagtattaattgaagggtacaattgaaaaaaaagaagttgttattgcattggaaactgaaagtaacattcattttaaaacaa 40011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 245
Target Start/End: Complemental strand, 50203229 - 50203031
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||| ||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| |||||| ||| | ||| |||||||||||||||| ||    
T  50203229 atttcaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatacttttgaagtaatgt-atataatattaattgaagggtacaa 50203131  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggaggga 241  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||         | |||||||||||| ||||||||||||| |||    
T  50203130 ttgaaaagaaaaagttattattgcattgg--actgaaagtgacattcattttaaaacaattttttt--gctaaaacgacactcattttaaaacggatgga 50203035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 28734779 - 28734609
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||  ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  28734779 aataaagtagtcaaatgtcataataattttatcaaattatcctaatcaattattggtttgtttttcattaaagaaaaaataatactttgcaagtagtgta 28734680  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||||| |||||||         ||||||||||| ||||||||||||||||||||    
T  28734679 acatagtattaattgaagggtacaattgaatttttttttttattattgcaatggaaactgaaagtgacatt 28734609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 41 - 185
Target Start/End: Original strand, 46392063 - 46392205
Alignment:
Q  41 aattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||| ||||||| |||||||||||||||||||| ||| ||||||||||| ||||||    
T  46392063 aattttaccaaattatcctaatcaactattggtttgttttctattaaataaaaaataatactttggaagtagtgtaa-ata-tattaattgaaaggtata 46392160  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    |||||||||||||| |||||||||| ||| ||| |||||||||||    
T  46392161 attgaaaagaaaaaattattattgctttgaaaagtgaaagtgaca 46392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 8971198 - 8971056
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||||||||| || ||||||||||||||||||  ||| |||||||||||| ||| |    
T  8971198 attttaccaaattatcttaataaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtat-atattattaattgaagagtaca 8971100  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||    
T  8971099 attgaaaagaaaaaattattatttcattgaaaactgaaagtgac 8971056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 45839793 - 45839648
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||||||| || ||||||||||||| ||||  ||| ||||||||||| |||| |    
T  45839793 attttaccaaattatcctaatcaacaattgatttgtttttcattaaagaaaaaaataatactttggaagtaatgtat-ataatattaattgaatggtaca 45839695  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  45839694 attgaaaataaaaagttattattgtattagaaactgaaagtgacatt 45839648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 52162259 - 52162107
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||||| |  ||||||||||||||||||||||    
T  52162259 attttaccaaattatcttaatcaaatattggtttgtttttcattaaagaaaaaataatactttggaactagtgt-atttagtattaattgaagggtataa 52162161  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    || |||  ||||| |||||||||| ||| ||| ||||||||||||| | |||||||    
T  52162160 ttcaaa--aaaaaattattattgcgttgaaaattgaaagtgacattcattttaaaa 52162107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 41496360 - 41496203
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||| ||||| |||| ||| ||||| |||||||||  ||| |||||||||||| ||| ||    
T  41496360 atttcaccaaattatcctaatcaactatttgtttgttttttattgaagaataaataatattttgggagtagtgtat-ataatattaattgaagagtacaa 41496262  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||| ||| ||||||    
T  41496261 ttgaaaagaaaaagttattattgtattgaaaactgaaagtgagatttattttgaaacaa 41496203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 34413548 - 34413706
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||||||||||| || || ||| |||||||||||  ||| ||||||||||| |||| |    
T  34413548 attttactaaattatgctaatcaactattggttcttttttcattaaagaaaaaaataatattttagaagtagtgtat-ataatattaattgaatggtaca 34413646  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||||| ||| ||||||    
T  34413647 attgaaaataaaaagttattattgcatttgaaattgaaagtgacatttattttgaaacaa 34413706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 39984991 - 39984894
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacata 121  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  39984991 tagtcaaatgtcatagcaattttatcaaattattctaatcaactattgatttgtttttcattaaagaaacaattatactttggaagtagtgtaacata 39984894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 40837311 - 40837128
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatac--tttggaagtagtg 114  Q
    ||||| ||||| ||||||||  ||| ||||||||||||||| ||||||   |||| |||| ||||||||||||||||||  |||   |||||||||||||    
T  40837311 aataaagtagtcaaatgtca--gcagttttaccaaattatcttaatcactcattgatttgtttttcattaaagaaaaaaaaataaaatttggaagtagtg 40837214  T
Q  115 taacatagtattaattgaa-gggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||  |||||  |||||||| |||||||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  40837213 taacatagtattaattgatcgggtacgattgaaaa-aaaaagttattattgcattggaaaatgaaagtgacattcattttgaaacaa 40837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 6991268 - 6991417
Alignment:
Q  46 taccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattga 145  Q
    ||||||||||||||| ||||||||||||||  |||| |||||||||||||| |||||||| || |||||| | ||| |||||| |||||||||  |||||    
T  6991268 taccaaattatcctagtcaactattggtttattttttattaaagaaaaaataatactttgaaaatagtgt-atataatattaactgaagggta-cattga 6991365  T
Q  146 aaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||| ||||||||| |||| ||||||||||||||||| | |||||||    
T  6991366 aaagaaaaaattattattgtattgaaaactgaaagtgacattcattttaaaa 6991417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 11364381 - 11364243
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||| || |||||||||| |||||||| |||| ||||| |||||||||||||||| | | ||| |||||||||||||||| ||    
T  11364381 attttaccaaattatcttaattaattattggtttgtttttcattgaagagaaaataatactttggaagtagtat-atataatattaattgaagggtacaa 11364283  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagt 181  Q
    |||||||||||||||||||||| ||||  |||| ||||||    
T  11364282 ttgaaaagaaaaagttattatttcattaaaaaccgaaagt 11364243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 37624662 - 37624554
Alignment:
Q  91 aaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttag 190  Q
    |||||| ||||||| ||||||||||  || ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37624662 aaaaataatacttttgaagtagtgtg-cagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttat 37624564  T
Q  191 tttaaaacaa 200  Q
    ||| ||||||    
T  37624563 tttgaaacaa 37624554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 56460241 - 56460082
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaa-gaaaaaattatactttggaagtagtgtaacatagtatta--attgaagggta 138  Q
    ||||||| ||||||| ||||||| ||||  ||||| ||||||||||| |||||||| ||| |||||||||||||||  ||| |||||  |||||||| ||    
T  56460241 attttactaaattattctaatcagctataagtttgtttttcattaaaagaaaaaataatattttggaagtagtgtat-ataatattataattgaaggata 56460143  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    ||||| |||||||||||||| |||||||||| || |||||||||||||| | |||||||||    
T  56460142 taattaaaaagaaaaagttactattgcattgaaagctgaaagtgacattcattttaaaaca 56460082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 25231274 - 25231173
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||| || ||||||||||  |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||    
T  25231274 atactttggaagtagtgta-caaagtattaattatagggtacaatagaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttaaaa 25231176  T
Q  198 caa 200  Q
    |||    
T  25231175 caa 25231173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 44868253 - 44868369
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||| ||| |||||||||| ||| | ||| ||||||||||| |||| ||    
T  44868253 attttaccaaattgtcctaatcaactattgatttgttttccattaaagataaaataatattttggaagtaatgt-atatattattaattgaatggtacaa 44868351  T
Q  142 ttgaaaagaaaaagttat 159  Q
    ||||||||||||||||||    
T  44868352 ttgaaaagaaaaagttat 44868369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 22220421 - 22220518
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||| ||||||    
T  22220421 tttggaagtagtgtg-catagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaaatgacatttattttgaaacaa 22220518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 25123764 - 25123873
Alignment:
Q  78 ttttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    ||||| ||||||||||||| ||| ||||||||| |||||  |||||||||||||||||||| || |||||||||||| ||||||||| |||| |||||||    
T  25123764 ttttctttaaagaaaaaataatattttggaagtcgtgtat-atagtattaattgaagggtacaactgaaaagaaaaaattattattgtattgaaaactga 25123862  T
Q  178 aagtgacattt 188  Q
    || ||||||||    
T  25123863 aaatgacattt 25123873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 175
Target Start/End: Original strand, 620177 - 620312
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag--aaaaaattatactttggaagtagtgtaacatagtattaattgaagggtat 139  Q
    |||||||||||||||  ||||||||||||| |||| ||||| |||||   ||||||| |||||||||||||| ||||  | ||||||||||||||||||     
T  620177 attttaccaaattattttaatcaactattgatttgtttttctttaaaagaaaaaaataatactttggaagtaatgtat-agagtattaattgaagggtac 620275  T
Q  140 aattgaaaag-aaaaagttattattgcattggaaact 175  Q
    |||||||||| ||||| ||||||||||||| ||||||    
T  620276 aattgaaaagaaaaaaattattattgcattagaaact 620312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 21864441 - 21864529
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||  || ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  21864441 atactttggaagtagtgtg-cagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtaacatt 21864529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 21920302 - 21920390
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||  || ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  21920302 atactttggaagtagtgtg-cagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtaacatt 21920390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 4505435 - 4505290
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||| |||||||||  || ||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||    
T  4505435 atactttgaaagtagtgtg-cagagtattaatgga-gggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaa 4505338  T
Q  198 caannnnnnnnggttaaaacgacacttattttaaaacggagggagtac 245  Q
    |||         | |||| ||||||| ||||| |||||||||||||||    
T  4505337 caatttttttttgctaaagcgacactcattttgaaacggagggagtac 4505290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 39982173 - 39982114
Alignment:
Q  128 attgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39982173 attgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 39982114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 47458388 - 47458544
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| |||||||  ||||| ||| | ||||||||||||||| |||| ||    
T  47458388 attttaccaaattatcctaatcaactatatgtttgtttttcgttaaag-aaaaataatactttaaaagtaatgt-atatagtattaattgaatggtacaa 47458485  T
Q  142 ttgaaaag-aaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| |||||  |||||||||||| |||||| | ||| ||||| | ||||||||||    
T  47458486 ttgaaaagaaaaaaaatattattgcatt-gaaactaagagttacattcattttaaaacaa 47458544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 44651043 - 44650902
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||  ||||| ||||  ||||||||||||| || || ||| |||| ||||||||| | |||||||||||||  ||||||||    
T  44651043 attttaccaaattatcataatcggctattagtttatttttcattaaagacaatataatattttgaaagtagtgt-atatagtattaattgttgggtataa 44650945  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    ||||||||||    || ||||||||||| ||||||||||||||    
T  44650944 ttgaaaagaatttttttttattgcattgaaaactgaaagtgac 44650902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 52915600 - 52915701
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||    
T  52915600 atactttggaagtagtgtg-cagagtattaattggatgatacaattgaaaagaaaaagttattattgcattggaaactgaaagcgacattcattttgaaa 52915698  T
Q  198 caa 200  Q
    |||    
T  52915699 caa 52915701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 7906054 - 7906142
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||| |||||  || ||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  7906054 atactttggaagcagtgtc-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcaccggaaactgaaagtgacatt 7906142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 51733552 - 51733653
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| || | |||||||||| ||||||||||||| |||||||||||||||||| | ||| |||    
T  51733552 atactttggaagtagtgtg-cagagtattaattggagggtacaagtaaaaagaaaaaattattattgcattagaaactgaaagtgacattcattttgaaa 51733650  T
Q  198 caa 200  Q
    |||    
T  51733651 caa 51733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 31918030 - 31917954
Alignment:
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||| |||||||||| ||| | ||||||||||    
T  31918030 attaattgaagggtaaaattgaaaagaaaaaactattattgcattggaagctgaaagtgaaattcattttaaaacaa 31917954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 27943611 - 27943705
Alignment:
Q  106 gaagtagtgtaacatagtattaattgaagggtataattgaaaagaaa-aagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||  ||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||| | ||| ||||||    
T  27943611 gaagtagtgtat-ataatattaattgaagggtataattgaaaaaaaagaagttattattgcattgaaaattgaaagtgacattcattttgaaacaa 27943705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 36558301 - 36558440
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaa---aattatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    |||||||||||||||||| || ||||||||||||| ||| || ||||| |||   ||| ||||||||| |||| ||| ||| |||||| |||| || |||    
T  36558301 attttaccaaattatccttattaactattggtttgttttccactaaagtaaaagtaataatactttgggagtaatgt-acacagtattcattggagagta 36558399  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
     |||||  ||||||||||||||||||||| ||||| |||||    
T  36558400 caattgggaagaaaaagttattattgcatgggaaattgaaa 36558440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 30780021 - 30780093
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagt 113  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||| |||||||| |||||||    
T  30780021 attttactaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatactttgaaagtagt 30780093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 24157264 - 24157183
Alignment:
Q  119 atagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| |||| || |||| |||||||||| ||||||||||||| |||||| ||| ||||||||| ||| ||||||    
T  24157264 atagtattaattaaaggatacaattaaaaagaaaaaattattattgcattagaaactaaaattgacatttattttgaaacaa 24157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 38510303 - 38510379
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaact 175  Q
    ||||||||||||||||||   | ||||||||||| | |||| |||||||||||||||||||||||||||||| |||||    
T  38510303 atactttggaagtagtgtgt-agagtattaattggatggtacaattgaaaagaaaaagttattattgcattgaaaact 38510379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 44061149 - 44061073
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaa-gaaaaaattatactttggaagtagtgtaa 117  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||  ||||||| ||| |||| |||||||||||    
T  44061149 attttactaaattatcataatcaactattggtttgtttttcattaaataaaaaaataatattttgcaagtagtgtaa 44061073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 44061071 - 44060972
Alignment:
Q  135 ggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaac 234  Q
    |||| ||||||||||||||||||||||||| ||| |||| ||||||||||||| | | ||||||||         |||||||||||||| ||||||||||    
T  44061071 ggtacaattgaaaagaaaaagttattattgtattagaaaatgaaagtgacattcattataaaacaaatttttatagttaaaacgacactcattttaaaac 44060972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 50621290 - 50621335
Alignment:
Q  144 gaaaagaaaaagttattattgcattggaaactgaaagtgacattta 189  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||    
T  50621290 gaaaagaaaaagttattattgcattgaaaacttaaagtgacattta 50621335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 30780218 - 30780326
Alignment:
Q  127 aattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttat 226  Q
    |||||||| ||| ||||||||||||||||||||||||||       ||||||| ||||||||| |||||||||          |||||||||||||| ||    
T  30780218 aattgaagagtacaattgaaaagaaaaagttattattgc-------actgaaaatgacatttattttaaaaca--tatttttcgttaaaacgacactcat 30780308  T
Q  227 tttaaaacggagggagta 244  Q
    ||||||||||||||||||    
T  30780309 tttaaaacggagggagta 30780326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 50621236 - 50621278
Alignment:
Q  119 atagtattaattgaagggtataattgaaaagaaaaagttatta 161  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  50621236 atagtattaattgaatgatataattgaaaagaaaaagttatta 50621278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 19903204 - 19903257
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa 95  Q
    ||||||| ||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  19903204 attttacaaaattatctgaataaactattggtttgtttttcattaaagaaaaaa 19903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 33033156 - 33033076
Alignment:
Q  125 ttaattgaagggtataattgaaaagaaaaagt-----tattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||| || |||| ||||||||| |||||||     ||||||||||||||||||| ||||||||||| | ||||||||||    
T  33033156 ttaattaaatggtacaattgaaaataaaaagttattttattattgcattggaaactaaaagtgacattcattttaaaacaa 33033076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 7905955 - 7905923
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  7905955 taaaacgacactcattttaaaacggagggagta 7905923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 40837112 - 40837080
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||| ||||||||||    
T  40837112 taaaacgacacttattttaaaatggagggagta 40837080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 47321352 - 47321384
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  47321352 taaaacgacactcattttaaaacggagggagta 47321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 50623293 - 50623325
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  50623293 taaaacgacactcattttaaaacggagggagta 50623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 2729758 - 2729985
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  2729758 aataaagtagtcaaacgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 2729857  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||        ||||||||    
T  2729858 acatagttttaattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcattttgaaacaagtttttttggttaaaa 2729957  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  2729958 cgacactcattttgaaacggagggagta 2729985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 39566364 - 39566136
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||||||||||    
T  39566364 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattgatttgtttttcattaaagagaaaataatactttggaagtagtgta 39566265  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||        || |||||    
T  39566264 acatattattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaaattttttgggctaaaa 39566165  T
Q  217 cgacacttattttaaaacggagggagtac 245  Q
    ||||||| ||||||||| ||| |||||||    
T  39566164 cgacactcattttaaaatggatggagtac 39566136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 42104035 - 42104263
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| |||| ||||||||||||||    
T  42104035 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattgacttgtttttcattaaagaaaaaataataccttggaagtagtgta 42104134  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa-nnnnnnnnggttaaa 215  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||         || ||||    
T  42104135 acatagtattaattgaagggtaaaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttggctaaa 42104234  T
Q  216 acgacacttattttaaaacggagggagta 244  Q
    |||||||| ||||| ||||||||||||||    
T  42104235 acgacactcattttgaaacggagggagta 42104263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 3305981 - 3306161
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  3305981 aataaagtagtcaaatgtcatagcaattttaccaaattatcttaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgta 3306080  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  3306081 acagagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa 3306161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 14620466 - 14620636
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  14620466 aataaagtagtcaaatgtcatagcaattttatcaaattatcttaatcaattattggtttgtttttcatcaaagaaaaaataatactttggaagtagtgta 14620565  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14620566 acataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 14620636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 34446000 - 34446182
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34446000 aataaagtagtcaaatatcatag-aattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 34446098  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||| ||||||| | ||| ||||||    
T  34446099 acatagtattaattgaagggtacaattgaaaagaaaatgttattattgtattgaaaactgaaaatgacattcattttgaaacaa 34446182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 14006073 - 14005911
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||    
T  14006073 aataaagtagtcaaatgtcatagctattttaccaaattatcctaatcaaatattggtttgtttttcattaaagaaaaaataataccttggaagtagtgta 14005974  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  14005973 acatagtattaattgaaggataaaattaaaaagaaaaagttattattgcattggaaactgaaa 14005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 6519158 - 6518974
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgt 115  Q
    ||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||| |||||||||    
T  6519158 aataaagtagtaaaatgtcataacaattttatcaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatactttgaaagtagtgt 6519059  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| | ||| ||||||    
T  6519058 aacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagcgacattcattttgaaacaa 6518974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 26660923 - 26660753
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| | ||||| | |||||||| ||||||||||||||    
T  26660923 aaatgtcatagcaattttaccaaattctcttaatcaactattggtttgtttttcattaaagaaaaa-taatactctagaagtagtataacatagtattaa 26660825  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||    
T  26660824 ttgaagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 26660753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 26932516 - 26932346
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| | ||||| | |||||||| ||||||||||||||    
T  26932516 aaatgtcatagcaattttaccaaattctcttaatcaactattggtttgtttttcattaaagaaaaa-taatactctagaagtagtataacatagtattaa 26932418  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||    
T  26932417 ttgaagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 26932346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 21375629 - 21375806
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattat-actttggaagtagtgtaacatag 122  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  21375629 tagtcaaatatcatagcaattttaccaaattatcctaatcacctatttgtttgtttttcattaaagaaaaaaatattactttgaaagtagtgtaacatag 21375728  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||| ||||||||| |||||   ||| |||||||| ||||||||||||||||||| ||||||||||    
T  21375729 tattaattgaagggtacaattgaaaaaaaaaaaaaatttttgcattgaaaactgaaagtgacatttattttaaaacaa 21375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 21319305 - 21319465
Alignment:
Q  38 agcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggt 137  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||| |||||| ||||||||||||| |||||||||||||||    
T  21319305 agcaattttaccaaattatcctaatcaactattggtttgtttttcattaaaaaaaatat-atattttgga-gtagtgtaacataatattaattgaagggt 21319402  T
Q  138 ataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||    
T  21319403 acaattgaaaagaaaaagttattattgcattggaagctgaaagtgacattcattttgaaacaa 21319465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 8336379 - 8336551
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa--ttatactttggaagtagtg 114  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  | ||| |||||||||||||    
T  8336379 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaaaataatattttggaagtagtg 8336478  T
Q  115 taacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||| ||| ||||||||| || ||||||||||||||||| ||| || ||||||||||    
T  8336479 taacatagtattaattgaagagtacaattgaaaaaaagaagttattattgcattgaaaaatggaagtgacatt 8336551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 42661919 - 42662091
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  42661919 tagtcaaatgtcataacaattttaccaaattatcctaatcaactattagtttgttttttattaaagaaaaaataatactttggaagtagtgtaacatagt 42662018  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||| ||||||||| ||||| |||||||| ||||| ||||| ||| | ||||| | |||||||    
T  42662019 attaattgaagggtacaattgaaaa-aaaaaattattattacattgaaaactaaaaataacattcattttaaaa 42662091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 27600575 - 27600354
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| |||| | ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||     ||||| | || |||||||    
T  27600575 aataaagtagtcaaatatcattgtaattttaccaaattatcctaatcaactattgatttgtttttcattaaaaaaaa-----tacttcgaaaatagtgta 27600481  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||         |||||||    
T  27600480 atatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagcaatatttattttaaaacaatttttttt-gttaaaa 27600382  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||| ||||||||||||||||| ||||||    
T  27600381 cgatacttattttaaaacggatggagta 27600354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 36165042 - 36164888
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||| |||||||||| ||||  |||||||||||||||||||||||    
T  36165042 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatattttggaagtaatgtat-atagtattaattgaagggtataa 36164944  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  36164943 ttgaaaagaaaaagttattactgcattggaaactgaaaatgacattcattttaaaa 36164888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 39504906 - 39504720
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa--ttatactttggaagtagtg 114  Q
    ||||| ||||| ||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||||  | ||| |||||||||||||    
T  39504906 aataaagtagtaaaatgtcgtaacaattttaccaaattattctaatcaactattagtttgtttttcaataaagaaaaaaaataatattttggaagtagtg 39504807  T
Q  115 taacatagtattaattgaagggtataattgaaaagaaaaagttatt-attgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| |||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  39504806 taacataatattaattaaaggatacaattgaaaagaaaaagttattaattgcattggaaactgaaagtgacattcattttaaaacaa 39504720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 39335175 - 39335321
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattat-actttggaagtagtgt 115  Q
    ||||| ||||| |||| |||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  39335175 aataaagtagtcaaatatcataataattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataacactttggaagtagtgt 39335274  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattat 162  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39335275 aacatagtattaattgaagggtacaattgaaaagaaaaagttattat 39335321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 27797933 - 27797782
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||| | ||   ||||||||| ||||||||| ||    
T  27797933 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaa-taatactttggaagtaatata---tagtattaactgaagggtacaa 27797838  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  27797837 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaa 27797782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 29807293 - 29807469
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatag 122  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||| | ||||||||||| || || |||||||||||||||||||||    
T  29807293 tagtcaaatgtaatagaaattttaccaaattatcctaatcaactattggtttgttttttactaaagaaaaaaataatattttggaagtagtgtaacatag 29807392  T
Q  123 tattaattgaagggtataattgaaaagaaaaagt--tattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||| |||| |||||||||||||||||  |||||||||||| |||||| ||||| ||||| | |||||||    
T  29807393 tattaattgaatggtacaattgaaaagaaaaagttatattattgcattagaaactcaaagtaacattcattttaaaa 29807469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 11977742 - 11977599
Alignment:
Q  43 ttttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataat 142  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||| | ||| |||||||| |||| || |||    
T  11977742 ttttaccaaattatcctaatcaactattggtttgttgttcattaaagaaaaaataatactttggaagtagtgt-atataatattaattaaaggatacaat 11977644  T
Q  143 tgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  11977643 tgaaaagaaaaagttattatggtattggaaactgaaagtgacatt 11977599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 34534514 - 34534371
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||| ||    
T  34534514 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgt-gcatagtattaattgaagggtacaa 34534416  T
Q  142 ttgaaaag-aaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||| ||||| |||||||||||||||||  |||||||||||||    
T  34534415 ttgaaaagaaaaaaattattattgcattggaa--tgaaagtgacatt 34534371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 39730127 - 39729978
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||    
T  39730127 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattcgtttgtttttcattaaagaaaaaataatattttggaagtagtgta 39730028  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    |||||||||||||             |||||||||||||||||||||||||||||||||||||    
T  39730027 acatagtattaat-------------tgaaaagaaaaagttattattgcattggaaactgaaa 39729978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 4425155 - 4424975
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||| |||||| |||| | |||| ||||||||||||||||||| |||||||||||||||||||    
T  4425155 aataaagtagtcaaatgtcataccaattttaccaaattatcttaatcatctatcgatttgtttttcattaaagaaaaaataatactttggaagtagtgta 4425056  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    | ||||||||||||||| |||| ||||||||||||||   |||| ||  |||| |||| |||||||| ||||| ||||||||||    
T  4425055 atatagtattaattgaaaggtacaattgaaaagaaaa---tattgttttattgaaaaccgaaagtgatatttattttaaaacaa 4424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 42978045 - 42978161
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||    
T  42978045 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactatgtaagtagtgta 42978144  T
Q  117 acatagtattaattgaa 133  Q
    |||||||||||||||||    
T  42978145 acatagtattaattgaa 42978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 15167009 - 15167210
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||||||||||| ||| |||||||||||||| | |||||| ||||||||| ||| ||    
T  15167009 attttaccaaattatcctagtcaactattggttaatttttcattaaagaaaaaataatattttggaagtagtgt-atatagtaataattgaagagtaaaa 15167107  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca-annnnnnnnggttaaaacgacacttattttaaaacggaggg 240  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| | ||| |||||          ||||||||||||||||| ||||||||||||||    
T  15167108 ttgaaaa-aaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacatttcttttgtggttaaaacgacacttactttaaaacggaggg 15167206  T
Q  241 agta 244  Q
    ||||    
T  15167207 agta 15167210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 13761668 - 13761555
Alignment:
Q  87 aagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacat 186  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  13761668 aagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattgaaaagtgaaagtgacat 13761569  T
Q  187 ttagtttaaaacaa 200  Q
    | | ||| ||||||    
T  13761568 tcattttgaaacaa 13761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 38370027 - 38369871
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||  ||||||| |||||||| ||||||||| | ||| |||||||||||| ||| ||    
T  38370027 attttaccaaattatcctaatcaactatttgttcgtttttcattaataaaaaaataatactttgaaagtagtgt-atataatattaattgaagagtacaa 38369929  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    || ||||||||||||||||||||||||||||| | ||||||| ||| | ||||||||||    
T  38369928 tttaaaagaaaaagttattattgcattggaaa-taaaagtgatattcattttaaaacaa 38369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 843173 - 843032
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||| |||||||||| | | | ||||||||||| |||| ||    
T  843173 attttaccaaattatcctaatcaactattggtttgtttctcattaaagaaaaaataacacttttgaagtagtgt-atacaatattaattgaatggtacaa 843075  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||| |||||   ||||||||||| |||||||||||||||||    
T  843074 ttgaaaaggaaaag---ttattgcattgcaaactgaaagtgacatt 843032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 14161898 - 14162056
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggta-ta 140  Q
    |||||| ||||||||| ||| |||||| ||||||  ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| ||||  |    
T  14161898 attttatcaaattatcataaacaactactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atatagtattaattgaatggtacaa 14161996  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||| ||||||||||||| |||||  ||| ||||||||| ||||| ||||    
T  14161997 attgaaaagaaaaaattattattgcattagaaacctaaaatgacatttattttaatacaa 14162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 34208926 - 34209052
Alignment:
Q  78 ttttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgc---attggaaa 173  Q
    |||||||||||||||||| || || |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||   ||||||||    
T  34208926 ttttcattaaagaaaaaaataatattttggaagtagtgtaatataatattaattgaagggtataattgaaaaaaaaaagttattattgcattattggaaa 34209025  T
Q  174 ctgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||| | ||| ||||||    
T  34209026 ctgaaagtgacattcattttgaaacaa 34209052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 38362135 - 38362279
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||| ||||||||||||| |||||||| |||  |||| |||||||||||||| |||||||  ||||||| ||  | |||||||||| | ||||||||    
T  38362135 attttactaaattatcctaattaactattgttttattttttattaaagaaaaaataatactttaaaagtagtatataa-agtattaatttatgggtataa 38362233  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||    
T  38362234 ttgaaaaggaaaagttattattgcattgaaaattgaaagtgacatt 38362279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 10344986 - 10345087
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||    
T  10344986 atactttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaa 10345084  T
Q  198 caa 200  Q
    |||    
T  10345085 caa 10345087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 7317105 - 7316985
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgac 220  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||         | |||| ||||    
T  7317105 agtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttgctaaagcgac 7317006  T
Q  221 acttattttaaaacggaggga 241  Q
    ||| |||||||||||||||||    
T  7317005 actcattttaaaacggaggga 7316985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 34972622 - 34972775
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| || |||||||||||||||||||||||||||||||  |||| |||| |||||||||| ||| ||||||||||        |    
T  34972622 aataaagtagtcaaatgtcgtatcaattttaccaaattatcctaatcaactattaatttgttttttattaaagaaagaataatactttgga--------a 34972713  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaa 178  Q
    ||||| |||| |||||| |||| |||| |||| ||||| |||||||||||||||||| ||||    
T  34972714 acataatattcattgaatggtacaattaaaaataaaaaattattattgcattggaaattgaa 34972775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 3024985 - 3025086
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||| |||  || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||    
T  3024985 atactttggaagtaatgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaa 3025083  T
Q  198 caa 200  Q
    |||    
T  3025084 caa 3025086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 7721250 - 7721094
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||||||||||| |||||||||| || || ||||||||||||| |||||||| ||||| ||| | ||| |||| |||||| | || ||    
T  7721250 attttaacaaattatcctaatcaattattggtttgtttgtctttaaagaaaaaataatactttgaaagtaatgt-atataatattgattgaatgatacaa 7721152  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| |||||||||||||||||||| ||||  ||||||| ||| | ||| ||||||    
T  7721151 ttgaaaa-aaaaagttattattgcattgaaaacataaagtgatattcattttgaaacaa 7721094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 13974429 - 13974302
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa-ttatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| | ||| |||||||||||  | | ||| || |||||||| |||| |    
T  13974429 attttaccaaattatcctaatcaactatttgtttgttttccattaaagaaaaaagtaatattttggaagtagcat-atataataataattgaatggtaca 13974331  T
Q  141 attgaaaagaaaaagttattattgcattg 169  Q
    |||||||||| ||| ||||||||||||||    
T  13974330 attgaaaagataaaattattattgcattg 13974302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 4630964 - 4630866
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||   | ||||||||||| ||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  4630964 atactttggaagtagtgtgtaa-agtattaattggaggatacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgacatttattttaaaa 4630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 4911112 - 4911187
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgta 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  4911112 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgta 4911187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 25362854 - 25362955
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||| |||    
T  25362854 atactttggaagtagtgtg-cagagtattaattggagggtaaaattgaaaagaaaaagtcattattgcattcgaaactgaaagtaacattcattttgaaa 25362952  T
Q  198 caa 200  Q
    |||    
T  25362953 caa 25362955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 197
Target Start/End: Original strand, 7748898 - 7749049
Alignment:
Q  45 ttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattg 144  Q
    |||||||||||| ||||| || |||||||||| ||||||||||||||||||| |||||||| ||||  ||| | |||||||||||| || | || ||||     
T  7748898 ttaccaaattattctaattaattattggtttgtttttcattaaagaaaaaataatactttgaaagttatgt-atatagtattaattaaatgatacaatta 7748996  T
Q  145 aaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||| | |  ||||||||| ||||| ||||||||||||  ||||| |||||||    
T  7748997 aaaatatacggttattattacattgaaaactgaaagtggtatttattttaaaa 7749049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 21195470 - 21195392
Alignment:
Q  106 gaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| |||||    
T  21195470 gaagtagtgtat-atagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaacttaaattgaca 21195392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 43584434 - 43584532
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaa-agttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||  || ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||  |||||| | ||||||||||    
T  43584434 tttggaagtagtgtg-cagagtattaattggagggtataattgaaaagaaaaaagttattattgcattgaaaactgaaaacgacattcattttaaaacaa 43584532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 1309356 - 1309481
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||| |||||||| |||| |||| || |||||||||||||||| |||  ||| ||||||||| | ||| ||||||||||| |||| |     
T  1309356 attttatcaaattatcataatcaacaattgatttgtttatcattaaagaaaaaataatatgttgtaagtagtgt-atataatattaattgaaaggtacac 1309454  T
Q  142 ttgaaaagaaaaagttattattgcatt 168  Q
    || |||||||||| |||||||||||||    
T  1309455 ttaaaaagaaaaaattattattgcatt 1309481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 7736529 - 7736455
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||| |||||||| ||||||||||    
T  7736529 attttaccatattatcctaatcaactattagttcgtttttcattaaagaaaaaataatactttgaaagtagtgta 7736455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 7579947 - 7580024
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||| ||||| | ||||||||||    
T  7579947 tattaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtaacattcattttaaaacaa 7580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 35765976 - 35766042
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||| | |||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  35765976 agtattaattggacggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgacatt 35766042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 4911228 - 4911305
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||| ||||||||||| | |||||||||||||| ||||||| ||||||||||| ||||||||||||| ||| ||||||    
T  4911228 tattgattgaagggtacagttgaaaagaaaaaggtattattacattggaaactaaaagtgacatttattttgaaacaa 4911305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 21634266 - 21634177
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    ||||||||||| |||| ||||||| |||||||||| ||||||||||||| ||||| ||| |||||||||||||| | ||| |||||||||||    
T  21634266 attttaccaaagtatcataatcaattattggtttgtttttcattaaaga-aaaataatattttggaagtagtgt-atataatattaattgaa 21634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 21642513 - 21642424
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    ||||||||||| |||| ||||||| |||||||||| ||||||||||||| ||||| ||| |||||||||||||| | ||| |||||||||||    
T  21642513 attttaccaaagtatcataatcaattattggtttgtttttcattaaaga-aaaataatattttggaagtagtgt-atataatattaattgaa 21642424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 28591620 - 28591735
Alignment:
Q  42 attttaccaaattatcctaat----caactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggt 137  Q
    |||||||||||||||||||||    ||||||||| |||| ||||||||||||||||||| ||  |||  || |||||| | |||||||||||| || |||    
T  28591620 attttaccaaattatcctaattaatcaactattgatttgtttttcattaaagaaaaaataattttttaaaaatagtgt-atatagtattaattaaaaggt 28591718  T
Q  138 ataattgaaaagaaaaa 154  Q
    | |||||||||||||||    
T  28591719 acaattgaaaagaaaaa 28591735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 13761880 - 13761823
Alignment:
Q  38 agcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa 95  Q
    ||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  13761880 agcaattttacaaaattatcttaatcaactattggtttatttttcattaaagaaaaaa 13761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 24281051 - 24280991
Alignment:
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| | ||| ||||||    
T  24281051 aattgaaaagaaaaaattattattgcattggaaactaaaagtgacattcattttgaaacaa 24280991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 24381161 - 24381221
Alignment:
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| | ||| ||||||    
T  24381161 aattgaaaagaaaaaattattattgcattggaaactaaaagtgacattcattttgaaacaa 24381221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 41645391 - 41645292
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||  |||||||| ||||||||| ||||||||||||| ||||| |||||||    ||||||| | |||||||||||||||||||| ||    
T  41645391 attttatcaaattattttaatcaaccattggtttgtttttcattaaaga-aaaataatacttt---tgtagtgt-atatagtattaattgaagggtacaa 41645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 7579598 - 7579643
Alignment:
Q  49 caaattatcctaatcaactattggtttgattttcattaaagaaaaa 94  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||    
T  7579598 caaattatcctaatcaactattgatttgtttttcattaaagaaaaa 7579643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 9066501 - 9066625
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacac 222  Q
    ||||||||||| | || || |||||||||||  |||||||||||||| ||||||||||| ||||| | ||| ||||||        |  ||||||||||     
T  9066501 tattaattgaatgctacaaatgaaaagaaaattttattattgcattgaaaactgaaagtaacattcattttgaaacaatttttcttgactaaaacgacat 9066600  T
Q  223 ttattttaaaacggagggagtacaa 247  Q
    ||||||| ||| |||||||||||||    
T  9066601 ttattttgaaatggagggagtacaa 9066625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 36073708 - 36073772
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||| | || |||||||||||||||||||||||||||||| ||| | ||| |||||||    
T  36073708 tattaattgaatgatacaattgaaaagaaaaagttattattgcattgaaaatttaaaatgacatt 36073772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 32158637 - 32158586
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaa 172  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||| |||||||    
T  32158637 agtattaattggagggtacaattgaaaaaaaaaagttattattgtattggaa 32158586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 39804216 - 39804248
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||||||||||    
T  39804216 taaaacgacacttattttaaaacggagggagta 39804248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 891091 - 891154
Alignment:
Q  123 tattaattgaagggtataattgaaaa-gaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    ||||||||||| |||| ||||||||| |||||| |||||||| ||||| ||| |||||||||||    
T  891091 tattaattgaatggtacaattgaaaaagaaaaaattattattacattgaaaagtgaaagtgaca 891154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 40776653 - 40776728
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaa-agttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||| |||||| ||||| ||| |||| |||||||||| ||||| ||| ||||||||||||| | |||||||    
T  40776653 tattaattggagggtacaattggaaataaaaaagttattattacattgaaaaatgaaagtgacattcaatttaaaa 40776728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 7736264 - 7736226
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttatta 161  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  7736264 tattaattaaagggtagaattgaaaagaaaaagttatta 7736226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 29653678 - 29653712
Alignment:
Q  210 gttaaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||| ||||||||||||||||||||    
T  29653678 gttaaaacgacactcattttaaaacggagggagta 29653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 31041970 - 31041940
Alignment:
Q  155 gttattattgcattggaaactgaaagtgaca 185  Q
    |||||||||||||||||||||||||||||||    
T  31041970 gttattattgcattggaaactgaaagtgaca 31041940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 39335331 - 39335365
Alignment:
Q  210 gttaaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||||| ||||||    
T  39335331 gttaaaacgacacttattttaaaacggatggagta 39335365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 24281209 - 24281098
Alignment:
Q  84 ttaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||||||||||| |||||||| ||||| |||   |||||||||||| ||  ||| |||||||| |||||| |||||| ||||||  ||||| |||||||    
T  24281209 ttaaagaaaaaataatactttgaaagtattgt-gtatagtattaatt-aaatgtacaattgaaatgaaaaaattattagtgcattaaaaactaaaagtga 24281112  T
Q  184 catttagtttaaaa 197  Q
     ||| | |||||||    
T  24281111 tattcattttaaaa 24281098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 24381002 - 24381113
Alignment:
Q  84 ttaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||||||||||| |||||||| ||||| |||   |||||||||||| ||  ||| |||||||| |||||| |||||| ||||||  ||||| |||||||    
T  24381002 ttaaagaaaaaataatactttgaaagtattgt-gtatagtattaatt-aaatgtacaattgaaatgaaaaaattattagtgcattaaaaactaaaagtga 24381099  T
Q  184 catttagtttaaaa 197  Q
     ||| | |||||||    
T  24381100 tattcattttaaaa 24381113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 15400381 - 15400413
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  15400381 taaaacgacactcattttaaaacggagggagta 15400413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 33693939 - 33693971
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||| ||||||    
T  33693939 taaaacgacacttattttaaaacggaaggagta 33693971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 42978176 - 42978220
Alignment:
Q  155 gttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    ||||||||||||||| ||||||||||||| ||| | |||||||||    
T  42978176 gttattattgcattgaaaactgaaagtgatattcattttaaaaca 42978220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 15823208 - 15823032
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  15823208 tagttaaatgtcatagcaattttaccaaattatcctaatcaactaatggtttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagt 15823109  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  15823108 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 15823032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 32806908 - 32807135
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  32806908 aataaagtagtcaaatgtcatagcaattttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgta 32807007  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||        || |||||    
T  32807008 acatagtattatttgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttaggctaaaa 32807107  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  32807108 cgacactcattttgaaacggagggagta 32807135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 9915625 - 9915397
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttacc-aaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgt 115  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||||||||    
T  9915625 aataaagtagtcaaatgtcatagcaattttacccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttgcaagtagtgt 9915526  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaa 215  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||||        |||||||    
T  9915525 aacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaaatgacattcattttaaaacaaatttttatggttaaa 9915426  T
Q  216 acgacacttattttaaaacggagggagta 244  Q
    |||||||| |||||  |||||| ||||||    
T  9915425 acgacactcattttgtaacggatggagta 9915397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 44108776 - 44108597
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa--ttatactttggaagtagtgtaacat 120  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  | |||||||||||||| ||||||||    
T  44108776 gtagttaaatgtcataacaattttaccaaattatcctaaacaactattggtttgtttttcattaaagaaaaaaaataatactttggaagtattgtaacat 44108677  T
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  44108676 agtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacatttattttaaaacaa 44108597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 49468688 - 49468864
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||    
T  49468688 tagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatcctttggaagtagtgtaatatagt 49468787  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| | ||| ||||||    
T  49468788 attaattgaagggtacaattgaaaagaaaatgttattattgcattggaaactgaaagttacattcattttgaaacaa 49468864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 31491740 - 31491967
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  31491740 aataaagtagtcaaatgtcatagcaattttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaattatactttgaaagtagtgta 31491839  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    ||||||||||||||||||| || |||||||||||||||||||||||  ||||| ||| ||||||||||||| | ||| ||||||        || |||||    
T  31491840 acatagtattaattgaaggatacaattgaaaagaaaaagttattatgacattgaaaattgaaagtgacattcattttgaaacaattttttttggctaaaa 31491939  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  31491940 cgacactgattttgaaacggagggagta 31491967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 50094411 - 50094240
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgt 115  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||||| |||||||||    
T  50094411 aataaagtagttaaatgtaatagtaattttaccaaattatcctaatcaactattggtttgcttttcattaaagaaaaaaacaatactttgtaagtagtgt 50094312  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50094311 aacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 50094240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 37 - 244
Target Start/End: Original strand, 48025244 - 48025451
Alignment:
Q  37 tagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48025244 tagcaattttaccaaattatcctaataaactatttgtttgtttttctttaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaaggg 48025343  T
Q  137 tataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacgg 236  Q
    || |||||||| |||||||||||||||||||||||||| |||||||||||| | ||| ||||||         | |||||||||||| ||||||||||||    
T  48025344 tacaattgaaacgaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaatttttttttgctaaaacgacactcattttaaaacgg 48025443  T
Q  237 agggagta 244  Q
    ||||||||    
T  48025444 agggagta 48025451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 10842961 - 10842791
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  10842961 aataaagtagtcaaatgtcatagcaattttaccaaattatcttaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtactgta 10842862  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  10842861 acatagtattaattgaagagtacaattgaaaagaaaatgttattattgcattgaaaactgaaagtgacatt 10842791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 5463757 - 5463573
Alignment:
Q  16 caataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgt 115  Q
    |||||| ||||| || ||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  5463757 caataaagtagtcaattgtcataacaattttaccaaataatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgt 5463658  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||    
T  5463657 aacatagtattaattaaagtgtacaattgaaaagaaaaagttataattgcattggaaactgaaagtgacattcattttgaaacaa 5463573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 42 - 244
Target Start/End: Complemental strand, 29568051 - 29567850
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||    
T  29568051 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtat-atagtattaattgaagggtacaa 29567953  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggaggga 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||         | |||||||||||| ||||| |||||||||||    
T  29567952 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaacttttttttgctaaaacgacactaattttgaaacggaggga 29567853  T
Q  242 gta 244  Q
    |||    
T  29567852 gta 29567850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 31798765 - 31798603
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacata 121  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||    
T  31798765 gtagtcaaatgtcatagcaattttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacata 31798666  T
Q  122 gtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    ||||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  31798665 gtattaattaaaaggtataattgaaaagaaaaagttattattgtatcggaaactgaaagtgac 31798603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 46046155 - 46045971
Alignment:
Q  16 caataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgt 115  Q
    |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| |||||||| |||||||||    
T  46046155 caataaagtagtcaaacgtcgtagcaattttaccaaattatcctaatcaactattaatttgattttcattaaagaataaataatactttgaaagtagtgt 46046056  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| | ||| ||||||    
T  46046055 aacatagtattaatcgaagggtataattgaaaataaaaagttattattgcatcgaaaactgaaagtgacattcattttgaaacaa 46045971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 24611489 - 24611660
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgt 115  Q
    ||||| ||||| |||||||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||    
T  24611489 aataaagtagtcaaatgtcataacaattttactaaattaccctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgt 24611588  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||||    
T  24611589 aacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattagaaactaaaagtgacatt 24611660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 46286800 - 46286958
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  || |||||||| ||||||||||    
T  46286800 aaatgtcatagcacttttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaatgatactttaaaaatagtgtaatatagtattaa 46286899  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46286900 ttgaagggtgcaattgaaaagaaaaagttattattgcattgaaaaatgaaagtgacatt 46286958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 52125106 - 52125276
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||    
T  52125106 aataaagtagtcaaatgtcgtagcaattttaccaaattattctaatcaactattggtttgtttttcattaaacaaaaaataatactatggaagtagtgta 52125205  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||| |||||||||||||||| |||||| || ||||| |||||||||||||||||||||||| |||||||    
T  52125206 acataatattaattgaagggtacaattgagaataaaaaattattattgcattggaaactgaaattgacatt 52125276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 35847906 - 35848086
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||   |||||||||| |||||||| ||||||||||    
T  35847906 aataaagtagtcaaatgtcataacaattttaccaaattatcttaatcaactattgatttgtttttca---aagaaaaaataatactttgaaagtagtgta 35848002  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  35848003 acatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattgtaaactgaaagtgacattcactttcaaacaa 35848086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 48009184 - 48009008
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| |||||||||||||    
T  48009184 tagtcaaatatcatagtaattttaccaaattatcctaatcaactattggtttgtttttcaataaagaaaaaataatactttggaagcagtgtaacatagt 48009085  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||| |||||||||||||||||||||||||||||  ||||| ||| || |||| | ||||||||||    
T  48009084 attaattgaacggtacaattgaaaagaaaaagttattattgcattaaaaactaaaaatgccattcattttaaaacaa 48009008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 43759513 - 43759347
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||| |||||||||||| |||||||||||||| |||||||| || | ||||||||||||||||||| | | |||||||||||||||    
T  43759513 aataaagtagtcaaatgtaatagcaattttatcaaattatcctaattaactattgattggtttttcattaaagaaaaaataacattttggaagtagtgta 43759414  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||    
T  43759413 acatattattaattgaagggtacaattgaaaagaaaaaattattattgcatcgaaaactgaaagtga 43759347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 15573794 - 15573605
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaa--aaaattatactttggaagtagtg 114  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||  ||||| ||| ||||||||||||     
T  15573794 aataaagtagtcaaatgttatagcaattttaccaaattatcctaattatctattggtttgtttttcattaaagaaaaaaaataatattttggaagtagtc 15573695  T
Q  115 taacatagtattaattgaagggtataattgaaaag----aaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| |||||||||||||||| ||||||||||    |||||||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  15573694 taacataatattaattgaagggtacaattgaaaagaaaaaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 15573605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 27209144 - 27209000
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||| |||| ||    
T  27209144 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaattgaatggtacaa 27209046  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  27209045 ttgaaaataaaaagttattattgcattggaaaccgaaagtgacatt 27209000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 1740622 - 1740794
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtatta 127  Q
    |||||| ||| |||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||| || |  ||||||||||||||||| ||||||||    
T  1740622 aaatgtaataacaattttaccaaattatcataatcaactattagtttgttttttattaaagaaaaaaataatgttttggaagtagtgtaacgtagtatta 1740721  T
Q  128 attgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  1740722 attgaatggtacaattgaaaataaaaagttattatttcattggaaactgaaagtgacattcattttaaaacaa 1740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 25151991 - 25151826
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattgg-tttgattttcattaaagaaaaaattatactttggaagtagtgt 115  Q
    ||||| ||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||  ||||||||||||||||||| ||||||||||||||||||    
T  25151991 aataaagtagtcaaatgtcatagtaattttaccaaattatactaatcaactattggttttttttttcattaaagaaaaaataatactttggaagtagtgt 25151892  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||      ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  25151891 aaca------taattgaagggtacaattgaaaagaaaatgttattattgcattggaaaccgaaagtgacatt 25151826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 34110676 - 34110538
Alignment:
Q  49 caaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaa 148  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| |||| ||| || ||||||||||||| |||| ||||    
T  34110676 caaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagagtaagataataataattgaagggtacaattaaaaa 34110577  T
Q  149 gaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  34110576 gaaaaagttattattgcattggaaactgaaagtaacatt 34110538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 25560868 - 25561004
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  25560868 attttaccaaattatcataatcaactattagtttgtttttcattaaagaaaaaataatattttggaagtagtgt-atatagtattaattgaaaggtataa 25560966  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25560967 ttgaaaagaaaaaattattattgcattggaaactgaaa 25561004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 26595065 - 26595221
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||| |||||||  ||||||||||||||| |||| ||    
T  26595065 attttaccaaattatcctaatcaattattggtttgtttttcattaaagaaaaattaattctttggaaatagtgtat-atagtattaattgaatggtacaa 26595163  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||||    
T  26595164 ttgaaaagaaaaatttattattgcattgtaaactgaaagtgacattcattttaaaaca 26595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 49426395 - 49426565
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatag 122  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||    || |||||||||||||||||||||    
T  49426395 gtagtcaaatgtgatatcaattttaccaaattatcctaatcaactattggtttgttcttcattaaaaaaaaa----tattttggaagtagtgtaacatag 49426490  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    |||||||||| ||||| | ||||||||||||| |||||||||||||| ||||||  ||||||||||| ||| |||||    
T  49426491 tattaattgacgggtacagttgaaaagaaaaaattattattgcattgaaaactg--agtgacatttattttgaaaca 49426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 78 - 244
Target Start/End: Complemental strand, 46554917 - 46554754
Alignment:
Q  78 ttttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    |||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  46554917 tttttattaaagaaaaaataatactttggaagtagtgtat-atagtattaattgaagggtacaattgaaaataaaaagttattattgcagtggaaactga 46554819  T
Q  178 aagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    | |||||||| | ||||||||||        ||||||||||||||| ||||||||||||||||||||    
T  46554818 aggtgacattcattttaaaacaa--ttttttggttaaaacgacactcattttaaaacggagggagta 46554754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 18794538 - 18794694
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||||  ||| |||||||||||||| | ||| |||||||||||||||  ||    
T  18794538 attttaccaaattattctaatcaactattagtttgttttccattaaagaaaaaagaatattttggaagtagtgt-atataatattaattgaagggtgcaa 18794636  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
     |||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  18794637 ctgaaaagaaaaagttattattgcattcgaaactgaaa-tgacatttattttaaaacaa 18794694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 26755338 - 26755181
Alignment:
Q  79 tttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaa 178  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  26755338 tttcattaaagaaaaaataatactttggaagtagtgtgacatagtattaattgaagggta-aattgaaaagaaaaagttattaatgtattggaaactgaa 26755240  T
Q  179 agtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacgga 237  Q
    ||||||||| | ||| ||||||        || |||||||||||| ||||| |||||||    
T  26755239 agtgacattcattttgaaacaattttttttggctaaaacgacactcattttgaaacgga 26755181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 7214009 - 7214185
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||  |||| |||| |||||| || ||||   | |||| || |||||||    
T  7214009 aataaagtagtcaaatatcatagcaattttaccaaattattctaatcaactatttatttgtttttaattaaaaaagaaat---attttgaaaatagtgta 7214105  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||   |||||||||||| |||||||||    
T  7214106 acatagtattaattgaagcgtataattaaaaagaaaaatttattattgcattgaaaac---aagtgacatttattttaaaaca 7214185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 7191202 - 7191360
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||||||||||||||||||||||||| ||||  ||||| |||||||||||| || || |||  ||||||||||  ||||||||||||||| ||||||    
T  7191202 attttaccaaattatcctaatcaactatttgtttatttttcgttaaagaaaaaaataatattttaaaagtagtgtat-atagtattaattgaaaggtata 7191300  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||| ||| | |||  |||||||||||||| ||||||||||    
T  7191301 attgaaaagaaaaagttattattacatagaaaatcgaaagtgacatttattttaaaacaa 7191360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 16757194 - 16757333
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||    || |||||| |||||||| |||| |||||  |||||||||||||||||||| ||    
T  16757194 attttaccaaactatcctaatcaactattagtttgtttttca----aggaaaaataatactttgaaagttgtgtat-atagtattaattgaagggtacaa 16757288  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacat 186  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  16757289 ttgaaaagaataagttattattgcattggaaactgaaagtgacat 16757333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 49900752 - 49900910
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||| ||||||||||||||||||||||||||  ||||| |||||| ||||||| |||||||| ||||||||| | ||| ||||||||||| |||| |    
T  49900752 attttactaaattatcctaatcaactattggtttatttttctttaaagaaaaaaataatactttgaaagtagtgt-atatattattaattgaaaggtaca 49900850  T
Q  141 attgaaaagaaaaagttattattgca-ttggaaactgaaagtgacatttagtttaaaaca 199  Q
    |||||||| ||||||||||||||| | ||| ||||||||||||||||||| |||||||||    
T  49900851 attgaaaataaaaagttattattgtatttgaaaactgaaagtgacatttattttaaaaca 49900910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 52066260 - 52066420
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||| |||| ||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||  || ||||| ||||||||||    
T  52066260 aataaagtagtcaaatgtaatagaaattttaccaaattatcttaatcaactattgatttgtttttcattaaacaaaaaaaaat-ctttgaaagtagtgta 52066358  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    | ||| |||||||||||||||| ||||||||||||||| |||||| ||||||| ||| |||||    
T  52066359 atataatattaattgaagggtacaattgaaaagaaaaa-ttattactgcattgaaaattgaaa 52066420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 31699285 - 31699405
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||   |||||||||||||||||||| ||    
T  31699285 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgt-ttatagtattaattgaagggtacaa 31699383  T
Q  142 ttgaaaagaaaaagttattatt 163  Q
    ||||||||||||| ||||||||    
T  31699384 ttgaaaagaaaaaattattatt 31699405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 50249409 - 50249264
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||    
T  50249409 atactttggaagtagtgtg-caaagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaa 50249311  T
Q  198 caannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    |||        || |||| ||||||| |||||||||| |||||||||    
T  50249310 caaatttttttggctaaagcgacactcattttaaaacagagggagta 50249264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 24884505 - 24884416
Alignment:
Q  108 agtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  24884505 agtagtgaaacttagtattaattgaagggtataattgaaaataaaaagttattattgcattggaaattgaaagtgacatttattttaaaa 24884416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 38531349 - 38531450
Alignment:
Q  99 tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaac 198  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| ||||    
T  38531349 tactttgaaagtagtgtaacatagtatcaattgaagggcataattgaaaagaaaaaattattattgcattggaaactgaaaatgacattcattttgaaac 38531448  T
Q  199 aa 200  Q
    ||    
T  38531449 aa 38531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 8895011 - 8895165
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| ||| |||| || |||||| | ||| |||||||||||||||| ||    
T  8895011 attttaccaaattatcctaatcaactattgatttgtttttcattaaaaaaaaaataatattttgaaaatagtgt-atataatattaattgaagggtacaa 8895109  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    || |||||||||| ||| |||| ||||  ||| | ||||| ||||||| |||||||    
T  8895110 ttaaaaagaaaaatttactattacattaaaaattaaaagtaacatttattttaaaa 8895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 43358191 - 43358336
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |              |||| |||||| |||||||||||||||||||    
T  43358191 tagtcaaatgtcatagcaattttaccaaattatcttaatcaactattgggttgtt--------------aaataatacttcggaagtagtgtaacatagt 43358276  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||||||| ||| |||||||||    
T  43358277 attaattgaagagtacaattgaaaataaaatgttattattgcattgaaaagtgaaagtga 43358336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 25487187 - 25487089
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  25487187 atactttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 25487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 13408320 - 13408462
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaan 201  Q
    |||||||||||||||||||| ||| || | ||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||| | ||||||||||     
T  13408320 tttggaagtagtgtaacataatatcaactaaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtaaaattcattttaaaacaat 13408419  T
Q  202 nnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
            | |||||||||||| ||||||||||| ||||||||    
T  13408420 ttgtttttggtaaaacgacactcattttaaaacgaagggagta 13408462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 2610828 - 2610964
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||| ||||||||||||| | |||||||  |||||||||||  |||||| |||||||||||||||||||  | | ||||||||||| | || ||    
T  2610828 attttaccaagttatcctaatcaattgttggtttatttttcattaaa--aaaaataatactttggaagtagtgtat-agaatattaattgaatgttacaa 2610924  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagt 181  Q
    ||||||||||||| ||||||||| |||| |||||||||||    
T  2610925 ttgaaaagaaaaaattattattgtattgaaaactgaaagt 2610964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 12591156 - 12591235
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  12591156 agtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaa 12591235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 189
Target Start/End: Original strand, 8989635 - 8989777
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||| ||| |||| | ||||||| | | ||||||||||||||| |||||    
T  8989635 attttaccaaattattataatcaactattggtttgtttttcattaaagaaaaaataatattttgaatgtagtgt-atagagtattaattgaaggatataa 8989733  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacattta 189  Q
    ||    | ||||| ||||||||  |||| ||||||||| |||||||||    
T  8989734 tt----aaaaaaaattattattctattgaaaactgaaaatgacattta 8989777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 38530809 - 38530894
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatact 102  Q
    ||||| ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  38530809 aataaagtagtcaaatgtcgcagcaattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatact 38530894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 34047309 - 34047388
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  34047309 agtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaa 34047388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 14373458 - 14373563
Alignment:
Q  91 aaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttag 190  Q
    |||||| |||||||| |||||||||  || | ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |     
T  14373458 aaaaataatactttgaaagtagtgtg-cagattattaattggagggtataattgaaaataaaaagttattgttgcattggaaactgaaaatgacattcat 14373556  T
Q  191 tttaaaa 197  Q
    |||||||    
T  14373557 tttaaaa 14373563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 34032132 - 34032233
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||| ||  || ||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| |||    
T  34032132 atactttggaagtagcgtg-caaagtattaattggacggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaa 34032230  T
Q  198 caa 200  Q
    |||    
T  34032231 caa 34032233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 44557116 - 44557197
Alignment:
Q  119 atagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||| |||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  44557116 atagcattaattgaatggtacaattgaaaagaaaatgttattattgcattggagactgaaagtgacattcattttaaaacaa 44557197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 40717368 - 40717436
Alignment:
Q  119 atagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||||||||||    
T  40717368 atagtattaattgaagggtacagttgaaaagaaaaaattattattgcattgaaaactgaaagtgacatt 40717436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 44258588 - 44258660
Alignment:
Q  128 attgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  44258588 attggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaacaa 44258660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 51244831 - 51244988
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaa--aaattatactttggaagtagtgtaacatagtattaattgaagggtat 139  Q
    ||||||| ||||||||||| ||||  |||| |||  ||||||| |||||||  ||||  ||||||||||||| ||||  |||||||||| ||||  |||     
T  51244831 attttactaaattatcctagtcaatcattgatttatttttcatcaaagaaataaaatattactttggaagtaatgtat-atagtattaactgaaatgtac 51244929  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||| |||| |||||||||    
T  51244930 aattgaaaagaaaaagttattattgtatt-gaaagtgaaagtgacttttattttaaaaca 51244988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 26352155 - 26352234
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| | ||| ||||||    
T  26352155 agtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaa 26352234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 39477751 - 39477860
Alignment:
Q  89 gaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacattt 188  Q
    |||||||| |||||| ||||||||||||  |||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||| | ||||||||||      
T  39477751 gaaaaaataatacttaggaagtagtgtat-atagtattaattgaagtgtacaattgaaaaaaaaaa-ttattattgcattggaaattaaaagtgacatcc 39477848  T
Q  189 agtttaaaacaa 200  Q
    | ||||||||||    
T  39477849 attttaaaacaa 39477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 27721057 - 27720969
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||  |  ||||||||||| |||||| ||||||||||||||||||||||||  |||| |||||||||||||||||    
T  27721057 atactttggaagtagtgtg-ctgagtattaattggagggtacaattgaaaagaaaaagttattattatattgaaaactgaaagtgacatt 27720969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 30293012 - 30292899
Alignment:
Q  126 taattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacactta 225  Q
    |||||| |||||| | ||||||| | ||||||||||||||||||||||||||||||| |||| | ||||||||||        |||| |||||||||| |    
T  30293012 taattggagggtacagttgaaaaaacaaagttattattgcattggaaactgaaagtggcattcattttaaaacaattttttttggttgaaacgacactca 30292913  T
Q  226 ttttaaaacggagg 239  Q
    ||||||||||||||    
T  30292912 ttttaaaacggagg 30292899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 52024287 - 52024387
Alignment:
Q  99 tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaac 198  Q
    |||||||||| ||||||  || ||||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||| | ||||||| ||| ||||    
T  52024287 tactttggaaatagtgtg-caaagtattaattggagggtacaattgaaaagaaaaatttattattgcattgaaaactgaaaataacatttattttgaaac 52024385  T
Q  199 aa 200  Q
    ||    
T  52024386 aa 52024387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 5134 - 5044
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    ||||||||||||||||||||||||||||||||||| |||||  | | |||||||| |||||||| ||||||||| | ||| |||||||||||    
T  5134 attttaccaaattatcctaatcaactattggtttgtttttcgctgatgaaaaaataatactttgaaagtagtgt-atataatattaattgaa 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 5225821 - 5225892
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagt 113  Q
    |||||||||||||||| |||| ||||||||||||  ||||||||||||||||| | ||||||||||||||||    
T  5225821 attttaccaaattatcataattaactattggtttatttttcattaaagaaaaagtaatactttggaagtagt 5225892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 14593406 - 14593460
Alignment:
Q  133 agggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14593406 agggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacatt 14593460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 49402923 - 49403003
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    |||||||||||||| |||  || | ||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||    
T  49402923 atactttggaagtaatgtg-caaaatattaattggagagtacaattgaaaagaaaaagttattattgcattggaaactgaaa 49403003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 28538360 - 28538233
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaa-aaaattatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||| ||||| |||| ||| || |||||| | |||||||||||| || |         
T  28538360 attttaccaaattatcataatcaactattggtttatttttcattaaagaaaaaaataatacattgaaaatagtgt-atatagtattaattaaatgactcg 28538262  T
Q  141 attgaaaagaaaaagttattattgcattg 169  Q
    ||| ||||||||||||||||||| |||||    
T  28538261 attaaaaagaaaaagttattattacattg 28538233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 33622396 - 33622515
Alignment:
Q  78 ttttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactg 176  Q
    |||||||||||||||||  || |||||| ||||||||||| |||| |||||| | ||| ||| ||||||||||| |||||||||||||||||| |||  |    
T  33622396 ttttcattaaagaaaaatgtaatactttagaagtagtgta-cataatattaactaaagagtacaattgaaaagataaagttattattgcattgaaaatcg 33622494  T
Q  177 aaagtgacatttagtttaaaa 197  Q
    ||| ||||||| | |||||||    
T  33622495 aaaatgacattcattttaaaa 33622515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 46271389 - 46271457
Alignment:
Q  119 atagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||||||| |||||||    
T  46271389 atagtattaattgaagtgtattattgaaaataaaaaattattattccattggaaactgaaaatgacatt 46271457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 46271018 - 46271093
Alignment:
Q  42 attttaccaaattatcctaatcaac-tattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||||||| |||||| |||||||| |||| ||||| ||||||||||||||||||| ||||||||||||| |||||    
T  46271018 attttaccagattatcgtaatcaacgtattagtttgtttttcattaaagaaaaaataatactttggaagttgtgta 46271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 9092739 - 9092618
Alignment:
Q  50 aaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaag 149  Q
    ||||||| |||||||| ||||| |||| ||||||||||||||||||  ||||||| |||||||||||     ||||||||||||| |||   ||||||||    
T  9092739 aaattattctaatcaaatattgatttgtttttcattaaagaaaaaa-aatacttttgaagtagtgta----tgtattaattgaagagtacgtttgaaaag 9092645  T
Q  150 -aaaaagttattattgcattggaaact 175  Q
     ||||| ||||||||| ||||||||||    
T  9092644 aaaaaaattattattggattggaaact 9092618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 12484680 - 12484781
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  | || ||||||||| |||||| | ||||||||||||||||||||||| ||||| || ||||| ||| ||| | ||| |||    
T  12484680 atactttggaagtagtgtgcc-taatattaattggagggtacagttgaaaagaaaaagttattattgtattggcaaatgaaaatgaaattcattttgaaa 12484778  T
Q  198 caa 200  Q
    |||    
T  12484779 caa 12484781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 52706953 - 52706880
Alignment:
Q  126 taattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| |||| |||||||||| |||||||| ||||  ||||||||||||||| ||| ||||||||||    
T  52706953 taattgaagggtacaattaaaaagaaaaaattattattacattaaaaactgaaagtgaca-ttattttaaaacaa 52706880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 41857409 - 41857333
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||  |||| ||||||||| |||||||| |||||    
T  41857409 tttggaagtagtgtg-catagtattaattagagggtataattgaaaaagaaaaattattattgtattggaaaatgaaa 41857333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 24483446 - 24483386
Alignment:
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||| | ||| ||||||    
T  24483446 aattgaaaagaaacagttattattgtattggaaactgaaactgacattcattttgaaacaa 24483386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 38947696 - 38947653
Alignment:
Q  157 tattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||    
T  38947696 tattattgcattggatactgaaagtgacattcattttaaaacaa 38947653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 44557065 - 44557112
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag 89  Q
    |||||||||||||||| |||| |||| |||||||| ||||||||||||    
T  44557065 attttaccaaattatcttaataaactgttggtttgtttttcattaaag 44557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 39125723 - 39125661
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    |||| ||||||||||| || || ||||||||| |||||||||||||| ||||| ||| |||||    
T  39125723 tattgattgaagggtagaactggaaagaaaaatttattattgcattgaaaacttaaaatgaca 39125661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 13408278 - 13408245
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagtac 245  Q
    |||||||||||| |||||||||||||||||||||    
T  13408278 taaaacgacactcattttaaaacggagggagtac 13408245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 12002232 - 12002200
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  12002232 taaaacgacactcattttaaaacggagggagta 12002200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 28200391 - 28200423
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  28200391 taaaacgacactcattttaaaacggagggagta 28200423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 33694418 - 33694450
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtt 74  Q
    ||||||||||||||| |||||||||||||||||    
T  33694418 attttaccaaattattctaatcaactattggtt 33694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 48025199 - 48025163
Alignment:
Q  209 ggttaaaacgacacttattttaaaacggagggagtac 245  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  48025199 ggttaaagcgacacctattttaaaacggagggagtac 48025163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 49402862 - 49402830
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||| ||||||    
T  49402862 taaaacgacacttattttaaaacggaaggagta 49402830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 1742172 - 1741946
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  1742172 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgta 1742073  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||        || |||||    
T  1742072 acatagtattaattgaagggtacaattgaaaagaaaaggttattattgcattggaaactgaaagtgacattcattttgaaacaa-ctttttgggctaaaa 1741974  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  1741973 cgacactcattttgaaacggagggagta 1741946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 22298171 - 22297951
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatag 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  22298171 gtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatag 22298072  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacac 222  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||         | |||||||||||    
T  22298071 tattaactgaagggtacagttgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttt--gctaaaacgacac 22297974  T
Q  223 ttattttaaaacggagggagtac 245  Q
    | ||||||||||||| |||||||    
T  22297973 tcattttaaaacggatggagtac 22297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 13405097 - 13405280
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||    
T  13405097 aataaagtagtcaaatgtcgtagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaacaatactttgaaagtagtgta 13405196  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  13405197 acatagtattaattgaagggtacaattgaaaagaaaaagttattattacattggaaactgaaagtgacattcattttaaaacaa 13405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 24 - 249
Target Start/End: Complemental strand, 37815898 - 37815673
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  37815898 tagtcaaatgtcatagcaattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagt 37815799  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||||| | ||| ||||||        | |||||||||||||    
T  37815798 attaattgaagggtataattgaaaagaaaaaattattattgtattggaaattgaaagcgacattcattttgaaacaattttttttgattaaaacgacact 37815699  T
Q  224 tattttaaaacggagggagtacaaat 249  Q
     ||||||||||||| | |||||||||    
T  37815698 cattttaaaacggaagcagtacaaat 37815673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 45948600 - 45948783
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  45948600 aataaagtagtcaaatgtcatagcaattttaccaaattatcgtaatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtaatgta 45948699  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  45948700 acatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 45948783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 31418483 - 31418666
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||  |||| |||| |||||||||||||| |||||||||||||||||||    
T  31418483 aataaagtagtcaaatgtcatagcaatttcaccaaattatcctaatcaactattaatttgtttttaattaaagaaaaaataatactttggaagtagtgta 31418582  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||    
T  31418583 acatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtggaatttattttgaaacaa 31418666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 23935602 - 23935420
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| || ||| ||||||||||||    
T  23935602 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataatccttcggaagtagtgta 23935503  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  23935502 acatagtattaattgaagggta-cattgaaaagaaaaagttattattgcattggaaactgaaaacgacatttattttaaaacaa 23935420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 27947471 - 27947654
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||    
T  27947471 aataaagtagtcaaatgtcatagcaattttactaaattatcctaatcaactattgatttgtttttcattaaagaaaaaatcatcctttggaagtagtgta 27947570  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
     |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||    
T  27947571 gcataatattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaagacaa 27947654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 35778000 - 35777817
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  35778000 aataaagtagtcaaatgtcataacaattttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 35777901  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    | |||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||| ||||||    
T  35777900 atatagtactaattgaagggtacaattgaaaataaaaagttattattgcattagaaaccgaaagtgacatttattttgaaacaa 35777817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 42879916 - 42880087
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  42879916 aaatgtcatagcaattttaccaaattatcgtaatcaactattagtttgtttttcattaaagaaaaaataattctttggaagtagtgtaacatagtattaa 42880015  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| | ||| ||||||    
T  42880016 ttgaagggtacaattgaaaagaaaaagttattattacattgaaaactgaaagtgacattcattttgaaacaa 42880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 24680309 - 24680126
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||||||||| || |    
T  24680309 aataaagtagtcaaatgtcataacaattttaccaaattattctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtaatgca 24680210  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  24680209 acatagcattaattaaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaa 24680126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 41137909 - 41137685
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattat-actttggaagtagtgt 115  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  41137909 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactactggtttgattt-cattaaagaaaaaaatattactttggaagtagtgt 41137811  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaa 215  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| |||| | | | ||||||        || ||||    
T  41137810 aacatagtatcaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtggcattcattgtgaaacaattttttttgg-taaa 41137712  T
Q  216 acgacacttattttaaaacggagggag 242  Q
    |||||||| ||||||||||||||||||    
T  41137711 acgacactcattttaaaacggagggag 41137685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 44453314 - 44453089
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||| ||||||| |||||||||||    
T  44453314 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcacctattggtttgtttttcattaaa--aaaaataatactttagaagtagtgta 44453217  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| | || |||| ||        | ||||||    
T  44453216 acatagtattaattgaagggtacaattgaaaaaagaaagttattattgcattggaaactgaaagtgacattcatttaaaaataatattttttgattaaaa 44453117  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||||||| ||| ||||||    
T  44453116 cgacactcattttaaaatggatggagta 44453089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 48684904 - 48684734
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||||| |||| |||||| |||| |||| |||||||||||||| |||||||| |||| |||||    
T  48684904 aataaagtagtcaaatgtcataacaattttaccaaattatccttatcatctattgatttgttttttattaaagaaaaaataatactttgaaagtggtgta 48684805  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48684804 acatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacatt 48684734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 29530905 - 29531088
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| |||| |||| ||| |||||||||| |||||||| |||| |||||    
T  29530905 aataaagtagtcaaatgtcatagcaattttaccaaatcatcctaatcaactattgatttgttttttattgaagaaaaaataatactttgaaagtggtgta 29531004  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||| | || |||||||    
T  29531005 acataatattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaaatgacattcatttcaaaacaa 29531088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 42 - 245
Target Start/End: Complemental strand, 40339614 - 40339412
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||  ||| |||||||||||||||| ||    
T  40339614 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaagaatactttggaagtagtgtataataatattaattgaagggtacaa 40339515  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggaggga 241  Q
    ||||||| | |||||||||||||||||| ||| ||||||||||| | | ||| ||||||        || |||||||||||| |||||||||||||||||    
T  40339514 ttgaaaa-ataaagttattattgcattgaaaattgaaagtgacagtcattttgaaacaattctttttggctaaaacgacactcattttaaaacggaggga 40339416  T
Q  242 gtac 245  Q
    ||||    
T  40339415 gtac 40339412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 27935948 - 27935765
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||| |||||| |||||||||||||||| | |||| |||||||| |||| ||||||||||||||||||| |||||||||||||||| ||    
T  27935948 aataaagtagtcaaaagtcataacaattttaccaaattagcttaattaactattgatttgtttttcattaaagaaaaaataatactttggaagtagttta 27935849  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    || ||||||||||| || | || ||||||| | |||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  27935848 acgtagtattaattaaatgatacaattgaagataaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 27935765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 10476291 - 10476137
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||||||||||||||||| |||| |||| | |||| || |||| |||||||||||||||||||  |||||||||||||||||||| ||    
T  10476291 attttatcaaattatcctaatcaactattgatttgttttttactaaaaaataaataatactttggaagtagtgtat-atagtattaattgaagggtacaa 10476193  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||    
T  10476192 ttgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcattttaaaa 10476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 36808115 - 36807933
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||| ||||||| || ||||||||||||  ||| ||||||||||||||||||| | |||||| ||||||||||    
T  36808115 aataaagtagtcaaatgtcatagcaattttatcaaattacccgaatcaactattgagttgtttttcattaaagaaaaaataa-actttgaaagtagtgta 36808017  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||  |||||||||||| ||| ||||||||||||||||||||||||| |||| |||  |||| ||||||||| ||||||||||    
T  36808016 acatgatattaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaagcgaaaatgacatttattttaaaacaa 36807933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 45933566 - 45933737
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||| |||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||| ||||||| ||||||| ||| ||||||||||||||    
T  45933566 tagtcaaatatcatagcaattttatcaaattatcttaatcaacttttggtttgtttttcattaaa-aaaaaataatactttagaaatagtgtaacatagt 45933664  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||  ||||||||||||||    |||||||||||| ||||||||||||||||| | ||||||||||    
T  45933665 attaattgaagggtgcaattgaaaagaaaa----attattgcattgaaaactgaaagtgacattcattttaaaacaa 45933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 48843703 - 48843550
Alignment:
Q  47 accaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtataattga 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||||||||||  |||||||||| | ||||||||||||||    
T  48843703 accaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatacgttggaagtagtgtat-atagtattaaattaagggtataattga 48843605  T
Q  146 aaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    | ||||||| |||||||||||||| ||||||||||||||||| | ||||||||||    
T  48843604 agagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaa 48843550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 24133124 - 24133283
Alignment:
Q  42 attttaccaaattatcctaatcaact--attggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtat 139  Q
    ||||||||||||||| ||||||||||  |||| |||| ||||||||||||||||||| ||| |||||| ||||| ||  ||||||||||||||||||||     
T  24133124 attttaccaaattatactaatcaactgtattgatttgtttttcattaaagaaaaaataatattttggatgtagtatat-atagtattaattgaagggtac 24133222  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  24133223 aattgaaaagaaaaaattattattgcattggaaactgaaagtgacgttcagtttaaaacaa 24133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 189
Target Start/End: Complemental strand, 28289370 - 28289224
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaa-aaaattatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| | ||||||||||||||| |||| |    
T  28289370 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgt-atatagtattaattgaa-ggtaca 28289273  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacattta 189  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  28289272 attgaaaagaaaatgttattattgcattgaaaactcaaagtgacattta 28289224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 42 - 189
Target Start/End: Original strand, 29636222 - 29636369
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||| | |||    
T  29636222 attttatcaaattatcctaataaattattggtttgtttttcattaaagaaaaaataatactttagaagtagtgt-atatagtattaattgaaggatgtaa 29636320  T
Q  142 ttgaaaagaaa-aagttattattgcattggaaactgaaagtgacattta 189  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  29636321 ttgaaaaaaaagaagttattattgcattagaaactgaaagtgacattta 29636369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 189
Target Start/End: Original strand, 21752107 - 21752253
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||| || |||||| | ||| | ||||||||| |||| ||    
T  21752107 attttaccaaattattctaatcaactattggtttgtttttcattaaagataaaataatactttgaaaatagtgt-atataatgttaattgaatggtacaa 21752205  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacattta 189  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  21752206 ttgaaacgaaaaagttattattgcattggaaactgaaaatgacattta 21752253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 40753425 - 40753581
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||  ||||||||||||||| |||| ||    
T  40753425 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaa-taatactttgaaagtagtgtat-atagtattaattgaatggtacaa 40753522  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| |||||||| ||||| ||||||||| ||||||| | |||| |||||    
T  40753523 ttgaaaagaaaaaattattattacattgaaaactgaaaatgacattcattttataacaa 40753581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 23155432 - 23155547
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||| ||||    
T  23155432 aataaagtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaa-aaaaaataatactttagaagtaatgta 23155530  T
Q  117 acatagtattaattgaa 133  Q
    ||||| |||||||||||    
T  23155531 acataatattaattgaa 23155547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 37490943 - 37490795
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgta--acatagtattaattgaagggta 138  Q
    |||||||||||||||| |||| ||||||| ||||| |||||||||||||||||| || ||||||  ||||||||||  | ||||||||||||||| ||||    
T  37490943 attttaccaaattatcttaataaactattagtttgtttttcattaaagaaaaaaataatactttccaagtagtgtactatatagtattaattgaaaggta 37490844  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
     ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  37490843 caattgaaaagaaaaaattattattgcattgaaaactgaaagtgacatt 37490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 8604086 - 8603928
Alignment:
Q  86 aaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||     
T  8604086 aaagaaaaaataatactttggaagtagtgtat-atagtattaattgaagggtatcattgaaaagaaaaagttattattgcattggaaattgaaagtgacg 8603988  T
Q  186 tttagtttaaaacaa-nnnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    || | ||||||||||         || |||||||||||| |||||||||||||| |||||    
T  8603987 ttcattttaaaacaatatttttatggctaaaacgacactcattttaaaacggagagagta 8603928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 33939729 - 33939887
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||||||||||| |||||||||| |||||||  |||||||||||||||||| || |||||||||| |||||||  ||| ||||||||||| |||| |    
T  33939729 attttaccaaattattctaatcaactgttggtttatttttcattaaagaaaaaagtaatactttggaattagtgtat-ataatattaattgaatggtaca 33939827  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||||| | ||||||||||    
T  33939828 attggaaagaaaaagttattattacattggaaaccaaaagtgacattcattttaaaacaa 33939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 19104997 - 19105154
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||| | ||||||||||||||||| |||| | ||||||||||||||||| ||  |||  ||||| ||||  |||||||||||||||||||| ||    
T  19104997 attttatcaagtaatcctaatcaactattgatttgttcttcattaaagaaaaaataatgttttaaaagtaatgtat-atagtattaattgaagggtacaa 19105095  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  19105096 ttgaaaagaaaaagttattattgcattaaaaactgaaagtgacattcattttaaaacaa 19105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 1031306 - 1031153
Alignment:
Q  46 taccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattga 145  Q
    |||||||||||| ||||||||||||| ||   |||| |||||||||||||| ||| |||||||||||||||  |||||||||||||||| ||| ||||||    
T  1031306 taccaaattatcataatcaactattgattctttttttattaaagaaaaaataataatttggaagtagtgtat-atagtattaattgaagagtacaattga 1031208  T
Q  146 aaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| |||| |||||||||||| ||||||||||| |||||||| | ||| ||||||    
T  1031207 aaataaaatgttattattgcaatggaaactgaaggtgacattcattttgaaacaa 1031153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 42286007 - 42285906
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | |||||||    
T  42286007 atactttggaagttgtgtg-catagtattaattgaagggtataattgaaaagaaaaaattattattgcattggaaactgaaaatgacattcattttaaaa 42285909  T
Q  198 caa 200  Q
    |||    
T  42285908 caa 42285906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 21819438 - 21819303
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||| ||| | ||||||||||||||| | || ||    
T  21819438 attttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgt-atatagtattaattgaatgatacaa 21819340  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||| || || ||||||||| |||| |||||||||    
T  21819339 ttgaaaa-aagaatttattattgtattgaaaactgaaa 21819303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 6563414 - 6563551
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||      | ||| |||||||||||||||| |    
T  6563414 attttatcaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaaataatactttggaagt------atataatattaattgaagggtaca 6563507  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    |||||||||||||||||||||||  |||  ||||||||||||||    
T  6563508 attgaaaagaaaaagttattattaaattaaaaactgaaagtgac 6563551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 10599544 - 10599465
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaat 96  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10599544 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaat 10599465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 25440971 - 25440873
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  25440971 atactttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatatattttaaaa 25440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 10599313 - 10599168
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||||||||| |||||| |||  ||| |||||||||||||||||||||||||||||| ||||||||||||| ||| | ||| |||    
T  10599313 atactttggaagtagtgtaacatagcattaatagaaaagtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaa 10599214  T
Q  198 caannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    | |         |||||||||||||| ||||||||||||||||||||    
T  10599213 c-atttttttttgttaaaacgacactcattttaaaacggagggagta 10599168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 715915 - 716016
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||| | || ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| |||    
T  715915 atactttggaagtagtg-agcagagtattaattggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaa 716013  T
Q  198 caa 200  Q
    |||    
T  716014 caa 716016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 12977738 - 12977883
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||    
T  12977738 atactttggaagtagtgtg-cagagtattaattggatggtacaattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttgaaa 12977836  T
Q  198 caannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    |||        || |||| ||||||| ||||||||| ||||||||||    
T  12977837 caattttttttggctaaagcgacactcattttaaaaaggagggagta 12977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 45499820 - 45499980
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta----tactttggaagtagtgtaacatagtattaattgaagggt 137  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||    ||||||| |||||||  |  ||| ||||||||||| ||     
T  45499820 attttaccaaattatcctaattaactattggtttgtttttcattaaagaaaaaaataataatactttgaaagtagt--agtataatattaattgaaaggc 45499917  T
Q  138 ataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    | | ||||||||||||  ||||||| |||||||||||||||||||| ||| | ||| ||||||    
T  45499918 acatttgaaaagaaaatattattatggcattggaaactgaaagtgaaattcattttgaaacaa 45499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 30312570 - 30312459
Alignment:
Q  85 taaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    |||||||||||| |||||||||||||||||||  | | |||||||||||||||| ||||||||||||||| ||||||||| |||| |||| |||||||||    
T  30312570 taaagaaaaaataatactttggaagtagtgtat-acaatattaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaaccgaaagtgac 30312472  T
Q  185 atttagtttaaaa 197  Q
    ||| | |||||||    
T  30312471 attcattttaaaa 30312459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 165
Target Start/End: Original strand, 8293064 - 8293186
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| | ||||||||||| |||| ||||||||| ||||||||| ||| |||||||||||||| | ||| |||||||| || | || ||    
T  8293064 attttaccaaattatcgtgatcaactattgatttgtttttcattacagaaaaaataataatttggaagtagtgt-atataatattaattaaaagatacaa 8293162  T
Q  142 ttgaaaagaaaaagttattattgc 165  Q
    ||||||| ||||||||||||||||    
T  8293163 ttgaaaataaaaagttattattgc 8293186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 37502414 - 37502333
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    ||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37502414 tttggaagtagtgtg-cagagtattaattggagggtaaaattgaaaagaaaaagttattattgcattggaaactgaaagtgac 37502333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 34012256 - 34012117
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaan 201  Q
    |||||||||||| ||  |||||||||||||||||||| ||||||||| |||||||||||| | ||||||||||| ||||||||||| | ||||||||||     
T  34012256 tttggaagtagtttat-atagtattaattgaagggtacaattgaaaaaaaaaagttattagtacattggaaacttaaagtgacattcattttaaaacaa- 34012159  T
Q  202 nnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
           || |||||||||||| |||||||||||||| |||||    
T  34012158 -ttttttggctaaaacgacactcattttaaaacggagtgagta 34012117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 16564799 - 16564885
Alignment:
Q  79 tttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgc 165  Q
    ||||||||||||||||||  || |||||||||| ||||||||| ||||||||||| | |||||||||||| ||||||||||||||||    
T  16564799 tttcattaaagaaaaaatattattttggaagtaatgtaacataatattaattgaatgctataattgaaaataaaaagttattattgc 16564885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 16600863 - 16600777
Alignment:
Q  79 tttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgc 165  Q
    ||||||||||||||||||  || |||||||||| ||||||||| ||||||||||| | |||||||||||| ||||||||||||||||    
T  16600863 tttcattaaagaaaaaatattattttggaagtaatgtaacataatattaattgaatgctataattgaaaataaaaagttattattgc 16600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 6747325 - 6747238
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  6747325 atactttggaagtagtgtg-cagagtattaattggagggtacaattaaaaagaaaa-gttattattgcattggaaactgaaagtgacatt 6747238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 47461370 - 47461469
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || |||| | |||||||| | |||||| |||||||| |||||||    
T  47461370 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataat-ctttaggagtagtgt-atatagtaataattgaatggtataa 47461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 34274871 - 34274792
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||    
T  34274871 agtattaattggagggtacaattaaaaagaaaaggttattattgcattggaaactgaaagtgacattcattttgaaacaa 34274792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 18270677 - 18270588
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaa-gaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||  || | ||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  18270677 atactttggaagtagtgtg-cagaatattaattggagggtacaattgaaagtgaaaaagttattattgcattggaaactgaaagtgacatt 18270588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 18292434 - 18292333
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| | | || |||||||| ||||||||||||||||||||||||| ||||||||||||| | ||| |||    
T  18292434 atactttggaagtagtgtg-cagagtattaattggatgatacaattgaaaggaaaaagttattattgcattggaaattgaaagtgacattcattttgaaa 18292336  T
Q  198 caa 200  Q
    |||    
T  18292335 caa 18292333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 31929912 - 31930057
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||| | | ||| | |||||||    
T  31929912 atactttggaagtagtgtg-caaagtattaattggagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaaataatattcattttaaaa 31930010  T
Q  198 caannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
     ||        |  |||| ||||||||||||||||||||| ||||||    
T  31930011 taattttttttgtctaaagcgacacttattttaaaacggatggagta 31930057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 44567093 - 44567194
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| | | || ||||||||||||||| |||||||||||||| ||| ||||||||||||| | |||||||    
T  44567093 atactttggaagtagtgtg-caaagtattaattggatgatacaattgaaaagaaaaatttattattgcattgaaaattgaaagtgacattcattttaaaa 44567191  T
Q  198 caa 200  Q
    |||    
T  44567192 caa 44567194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 7795213 - 7795278
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttc 82  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  7795213 aataaagtagtaaaatgtcatagcaattttaccaaattatcctaatcacctattggtttgtttttc 7795278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 42753845 - 42753706
Alignment:
Q  57 cctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagt 156  Q
    |||||||||||||||||||  |||||||||||  |||||| |||||||  || |||||||  ||| ||||||||||||| ||  ||||||||||||  ||    
T  42753845 cctaatcaactattggtttatttttcattaaa--aaaaataatactttaaaaatagtgtat-ataatattaattgaagg-tacgattgaaaagaaagtgt 42753750  T
Q  157 tattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| |||||||| ||||||||||||| | ||| ||||||    
T  42753749 tattattgtattggaaattgaaagtgacattcattttgaaacaa 42753706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 7759410 - 7759324
Alignment:
Q  47 accaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaag 134  Q
    |||||||||||||||||||||||| ||||| |||  |||||||||||||| |||||||| ||||||||| | ||| ||||||||||||    
T  7759410 accaaattatcctaatcaactattagtttgttttctattaaagaaaaaataatactttgaaagtagtgt-atataatattaattgaag 7759324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 31196723 - 31196580
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| |||||||||  |||||||||||| |||  ||||  ||||||||||||| |||||||| || |||||||  ||| |||||||||||||| | ||    
T  31196723 attttatcaaattatcacaatcaactattgatttattttt--ttaaagaaaaaataatactttgaaattagtgtat-ataatattaattgaagggcacaa 31196627  T
Q  142 ttgaaaaga-aaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||| ||||||||||||  |||| |||| | |||||||||||    
T  31196626 ttgaaaagaaaaaagttattataacattagaaattcaaagtgacatt 31196580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 33682627 - 33682543
Alignment:
Q  99 tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    ||||||||||||||||||  | |||||||||||||||||| |||||||||| |||| |||||||||||||| ||  ||||||||||    
T  33682627 tactttggaagtagtgtataa-agtattaattgaagggtaaaattgaaaaggaaaaattattattgcattgaaacttgaaagtgac 33682543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 34012612 - 34012559
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa 95  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  34012612 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 34012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 40927237 - 40927174
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||| |||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  40927237 agtattgattggagggtataattgaaaa---aaagttattattgcattggaaactgaaagtgacatt 40927174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 32501855 - 32501946
Alignment:
Q  153 aagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||         |||||||||||||| ||||||||| ||||||||||    
T  32501855 aagttattattgcattgaaaactgaaagtgatatttattttaaaacaatttttttttgttaaaacgacactcattttaaaatggagggagta 32501946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 4268744 - 4268568
Alignment:
Q  65 actattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaa-gaaaaagttattatt 163  Q
    ||||||| |||| ||||||||||| | ||||| ||| |||||||||| | | | ||||||||||||| | |||| |||||||||  |||||  |||||||    
T  4268744 actattgatttgtttttcattaaaaagaaaataataatttggaagtaatat-atatagtattaattggaaggtacaattgaaaacaaaaaaaatattatt 4268646  T
Q  164 gcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggaggga 241  Q
     ||||||||| |||||| |||||| | ||| ||||||        |  |||||||||||| |||||||||||||||||    
T  4268645 acattggaaattgaaagcgacattcattttgaaacaatttcttttgtctaaaacgacactcattttaaaacggaggga 4268568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 39557381 - 39557323
Alignment:
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||| ||||||| |||||||| ||||| ||||||||||||||||||| |||||||    
T  39557381 taattgaagagaaaaaattattattacattgaaaactgaaagtgacatttattttaaaa 39557323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 24780398 - 24780459
Alignment:
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||||||| | ||| ||||||    
T  24780398 taattgaaaataaaaaattattattgcattagaaactgaaagtgacattcattttgaaacaa 24780459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 7335436 - 7335372
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgatttt-cattaaagaaaaaattatactttg 105  Q
    |||||||||||||||| ||||||||| |||||||| ||||  |||||||||||||| ||||||||    
T  7335436 attttaccaaattatcataatcaactgttggtttgtttttaaattaaagaaaaaataatactttg 7335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 25055937 - 25055869
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagt 110  Q
    ||||||||| |||||| ||||  ||||||| |||| ||||||||||||||||||| ||| |||||||||    
T  25055937 attttaccacattatcataatttactattgatttgtttttcattaaagaaaaaataatattttggaagt 25055869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 2297091 - 2297036
Alignment:
Q  145 aaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| | ||| ||||||    
T  2297091 aaaagaaaaagatattattgcattgaaaactgaaagtgacattcattttgaaacaa 2297036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 7900084 - 7899993
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaag 134  Q
    |||||||||||||||||| |  ||||||||||||| ||| || ||||  |||| | |||||||| |||||||||  ||| |||||||||||||    
T  7900084 attttaccaaattatcctcaataactattggtttgttttccactaaaacaaaagtaatactttgaaagtagtgt-tcattgtattaattgaag 7899993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 19303390 - 19303450
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatact 102  Q
    ||||||| |||||||| |||||||| ||||||||  |||||||||||||||| || |||||    
T  19303390 attttactaaattatcataatcaaccattggtttatttttcattaaagaaaatataatact 19303450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 24780314 - 24780366
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaa 94  Q
    ||||||| |||||||||||||| |||||||||||  |||| ||||||||||||    
T  24780314 attttactaaattatcctaatctactattggtttatttttaattaaagaaaaa 24780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 25055841 - 25055809
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaag 155  Q
    |||||||||||||||||||||||||||||||||    
T  25055841 tattaattgaagggtataattgaaaagaaaaag 25055809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 246
Target Start/End: Original strand, 34274992 - 34275026
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagtaca 246  Q
    |||||||||| ||||||||||||||||||||||||    
T  34274992 taaaacgacatttattttaaaacggagggagtaca 34275026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 8334365 - 8334466
Alignment:
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggagg 239  Q
    ||||||| || |||| ||||||||| |||||||| ||||||||||||| | ||| ||||||        || | |||||||||| ||||| |||||||||    
T  8334365 aattgaataggaaaatttattattggattggaaaatgaaagtgacattgattttgaaacaattttgtttggcttaaacgacactcattttgaaacggagg 8334464  T
Q  240 ga 241  Q
    ||    
T  8334465 ga 8334466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 31883883 - 31883823
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttat 159  Q
    ||||||||||||||||||  || ||||||||||| |  ||| ||||||||||||||||||||    
T  31883883 atactttggaagtagtgtg-cagagtattaattggaatgtacaattgaaaagaaaaagttat 31883823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 33845367 - 33845335
Alignment:
Q  214 aaacgacacttattttaaaacggagggagtaca 246  Q
    |||||||||| ||||||||||||||||||||||    
T  33845367 aaacgacactcattttaaaacggagggagtaca 33845335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 37815933 - 37815965
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  37815933 taaaacgacactcattttaaaacggagggagta 37815965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 1e-75; HSPs: 85)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 12342274 - 12342047
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||    
T  12342274 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatattttggaagtagtgta 12342175  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||        ||||||||    
T  12342174 acatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaattttttttggttaaaa 12342075  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||| ||||||    
T  12342074 cgacactcattttgaaacggaaggagta 12342047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 29396652 - 29396835
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  29396652 aataaagtagtcaaatgtcgtagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 29396751  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||    
T  29396752 acataatattaattgaagggtataattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 29396835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 441203 - 441431
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  441203 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaataatactttggaagtggtgta 441302  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa-nnnnnnnnggttaaa 215  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| | ||| ||||||         || ||||    
T  441303 acatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaacagaaagtgacattcattttgaaacaatttttttttggctaaa 441402  T
Q  216 acgacacttattttaaaacggagggagta 244  Q
    |||||||||||||| ||||||||||||||    
T  441403 acgacacttattttgaaacggagggagta 441431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 4133203 - 4132978
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||    
T  4133203 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttctttaaggaaaaaataatactttggaagtagtgta 4133104  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||        || |||||    
T  4133103 acatagtatta--tgaagggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaattttttttggctaaaa 4133006  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  4133005 cgacactcattttgaaacggagggagta 4132978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 38926787 - 38926604
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  38926787 aataaagtagtcaaatgtcataacaattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 38926688  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  38926687 acatagtattaattgaagggtacaattgaaaaaaagaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 38926604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 29808994 - 29808768
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgt 115  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||    
T  29808994 aataaagtagtcaaatgtcgtagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgt 29808895  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaa 215  Q
    |||||| |||||| |||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||        |  ||||    
T  29808894 aacataatattaagtgaagggtacgattgaaaagaaaaagttatgattgcattgaaaactgaaagtgacattcattttaaaacaa--ttttttgaataaa 29808797  T
Q  216 acgacacttattttaaaacggagggagta 244  Q
    |||||||||||||| ||||||||||||||    
T  29808796 acgacacttattttgaaacggagggagta 29808768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 6220376 - 6220596
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||| ||| |||||||||||||||    
T  6220376 aataaagtagtcaaatgtcatagcaattttatcaaattatcctaatcaactattggtttgtttttcattaaaaagaaaataataatttggaagtagtgta 6220475  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    ||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||         |||||||    
T  6220476 acataatattaattgaaaggtacagttgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaatttttttgagttaaaa 6220575  T
Q  217 cgacacttattttaaaacgga 237  Q
    |||||||  ||||||||||||    
T  6220576 cgacactcgttttaaaacgga 6220596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 36 - 187
Target Start/End: Original strand, 45081891 - 45082042
Alignment:
Q  36 atagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagg 135  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  45081891 atagaaattttaccaaattatcctaatcaactattgttttgtttttcattaaagaaaaaataatgctttggaagtagtgtaacataatattaattgaagg 45081990  T
Q  136 gtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45081991 gtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacatt 45082042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 200
Target Start/End: Complemental strand, 13562168 - 13561992
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatag 122  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||     
T  13562168 gtagtcaaatgtcatat-aattttactaaattatcctaatcaaccattggtttgtttttcattaaataaaaaataatactttggaagtagtgtaacataa 13562070  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
     ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  13562069 cattaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactgaaagtgacatttattttgaaacaa 13561992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 32227995 - 32228166
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  32227995 aaatgtcataacaattttaccaaattatcctaatcaactattgggttgtttttcattaaagaaaaaataatactttgaaagtattgtaacatagtattaa 32228094  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| || ||||||||||||||||||||||||||  ||||  ||||||||||| | ||||||||||    
T  32228095 ttgaagggtacaactgaaaagaaaaagttattattgcatttaaaaccaaaagtgacattcattttaaaacaa 32228166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 16807489 - 16807716
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| || || |||||||||| |||||    
T  16807489 aataaagtagtcaaatgtcataacaattttatcaaattattctaatcaactatttgtttgtttttcattaaagaaaatataattctttggaagtggtgta 16807588  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
     ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||          ||||||    
T  16807589 ccattgtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaacttaaagtgacatttattttgaaacaatttttttt-attaaaa 16807687  T
Q  217 cgacacttattttaaaacggagggagtac 245  Q
    ||||||| |||||||||||||| ||||||    
T  16807688 cgacactcattttaaaacggagagagtac 16807716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 16846770 - 16846997
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| || || |||||||||| |||||    
T  16846770 aataaagtagtcaaatgtcataacaattttatcaaattattctaatcaactatttgtttgtttttcattaaagaaaatataattctttggaagtggtgta 16846869  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
     ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||          ||||||    
T  16846870 ccattgtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaacttaaagtgacatttattttgaaacaatttttttt-attaaaa 16846968  T
Q  217 cgacacttattttaaaacggagggagtac 245  Q
    ||||||| |||||||||||||| ||||||    
T  16846969 cgacactcattttaaaacggagagagtac 16846997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 4288703 - 4288866
Alignment:
Q  37 tagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  4288703 tagcaattttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaatgg 4288802  T
Q  137 tataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |  ||||||||||||||| ||||||||||||| ||||||| |||||| ||| | ||| ||||||    
T  4288803 tgcaattgaaaagaaaaaattattattgcattagaaactgtaagtgatattcattttgaaacaa 4288866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 25383457 - 25383639
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| | | |||||||| ||||||||||    
T  25383457 aataaagtagtcaaatatcatagcaattttaccaaattatcttaatcaactattgatttgtttttcattaaagaaatagtaatactttgaaagtagtgta 25383556  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||    
T  25383557 acataatattaattgaa-ggtacaattgaaaagaaaaagttattattgcattggaaactgaaaataacattcattttaaaacaa 25383639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 1423348 - 1423206
Alignment:
Q  41 aattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  1423348 aattttaccaaattatcctaatcaactattggtttgtttctcattaaagaaaaaataatattttggaagtagtgtaacatactattaattgaagggtata 1423249  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||    
T  1423248 attgaaaagaataagttattattccattgaaaactgaaagtga 1423206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 12393891 - 12394076
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtg-- 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  ||||||| || |||||      
T  12393891 aataaagtagttaaatgtcatagcaattttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaatattactttgaaaatagtgta 12393990  T
Q  115 taacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| |||||||||||||||| |||| |||| ||||||||||||||||||| |||||||||||| ||||| | ||| ||||||    
T  12393991 taacataatattaattgaagggtacaattaaaaataaaaagttattattgcattagaaactgaaagtaacattcattttgaaacaa 12394076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 18719430 - 18719587
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||  |||||||||||||||||||| ||    
T  18719430 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaaatagtgtat-atagtattaattgaagggtacaa 18719528  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | || |||||||    
T  18719529 ttgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttcaaaacaa 18719587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 30855279 - 30855116
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaa-aaaattatactttggaagtagtgtaacatag 122  Q
    |||| ||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||  |||||||||||||||||||||    
T  30855279 tagtcaaatgtcttaacaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatgttttggaagtagtgtaacatag 30855180  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||| || |||| ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  30855179 tattaattaaatggtacaattgaaaagaaaaa-ttattattgcattggaaactgagagtgacatt 30855116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 37038767 - 37038921
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| | ||| |||||||||||||||||||    
T  37038767 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgt-atataatattaattgaagggtataa 37038865  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||   ||||||||||| ||||||||||||||||| | ||||||||||    
T  37038866 ttgaaaagaaaaag---ttattgcattgaaaactgaaagtgacattcattttaaaacaa 37038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 62 - 244
Target Start/End: Complemental strand, 18579302 - 18579118
Alignment:
Q  62 tcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttatta 161  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||| ||||||    
T  18579302 tcaactattggtttgtttttcattaaagaaaaaattatactttggaagtagtgtat-atagtattaattgaagggtgcaattgaaaagaaaaaattatta 18579204  T
Q  162 ttgcattggaaactgaaagtgacatttagtttaaaacaa---nnnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    |||||||| ||||||||||||||||| | ||| ||||||           ||||||||||||||||||||||||||||| ||||||    
T  18579203 ttgcattgaaaactgaaagtgacattcattttgaaacaattctttttgttggttaaaacgacacttattttaaaacggatggagta 18579118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 8789409 - 8789581
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||||||||||||||||| ||    
T  8789409 tagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttatttttcattaaag-aaaaataatactttggaagtagtgtaacat-gt 8789506  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| ||| ||||||||||  | ||||||||||| |||||||||| |||| || ||| | ||||||||||    
T  8789507 attaattgaagagtacaattgaaaag--acagttattattgtattggaaactaaaagcgatattcattttaaaacaa 8789581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 42005051 - 42004892
Alignment:
Q  37 tagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| |||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  42005051 tagcaatttcaccaaattatcctaatcaactatttgtttgttttt-attaaaaaaacaataatactttggaagtagtgtaacataatattaattgaaggg 42004953  T
Q  137 tataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    || ||||||||| ||||| |||||||||||||||||| | ||| ||||||| | |||||||    
T  42004952 tacaattgaaaataaaaaattattattgcattggaaattaaaaatgacattcattttaaaa 42004892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 8774226 - 8774074
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||| ||    
T  8774226 tagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttatttttcattaaaga-aaaataatactttggaagtagtgtaacat-gt 8774129  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaag 180  Q
    ||||||||||| ||| ||||||||||  | ||||||||||| |||||||||| ||||    
T  8774128 attaattgaagagtacaattgaaaag--acagttattattgtattggaaactaaaag 8774074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 8540194 - 8540036
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||| || || ||| |||||||||||| ||| |||||||||||||||| |    
T  8540194 attttatcaaattatcctaatcaactattagtttgtttttcattaaagaaaaaaataatattttagaagtagtgtaa-ataatattaattgaagggtaca 8540096  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| |||||||||||||||||||||| |||||||||||| || |||| | ||||||||||    
T  8540095 attaaaaagaaaaagttattattgcactggaaactgaaaatgtcattcattttaaaacaa 8540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 36106375 - 36106554
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||  || |||||||||||||||||| |||||||||||||| ||| |||| |||||| ||||||| |||| ||||||||||||||    
T  36106375 aataaagtagtcaaatgttctaacaattttaccaaattatcttaatcaactattggattgttttttattaaaaaaaaaataatacattggaagtagtgta 36106474  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||     ||||||||||||||||  |||||||||||||   ||||||||||| | ||||||||||    
T  36106475 acatagtattaattgaagggt----gtgaaaagaaaaagttagcattgcattggaaaacaaaagtgacattcattttaaaacaa 36106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 42753916 - 42753755
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaa-aattatactttggaagtagtgtaacatagtatta 127  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||| |||| |||  |||||||||||||||||||||||| ||||    
T  42753916 aaatgtcatagcaattttaccaaatcatcctaatcaactattgatttgtttttctttaaaaaaaataatagtactttggaagtagtgtaacatagcatta 42753817  T
Q  128 attgaagggtataattgaaaa-gaaaaagttattattgcattggaaactgaaagtgacattt 188  Q
    |||||||  || |||| ||||  ||||||||||||| |||||| ||||||||||||||||||    
T  42753816 attgaagaatacaattaaaaataaaaaagttattatcgcattgaaaactgaaagtgacattt 42753755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 12565978 - 12566135
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| || ||||  |||| |||| ||||||||||||| |||||||||||||||||| ||||||  ||| ||||||||||| |||| ||    
T  12565978 attttaccaaattatcttactcaatcattgatttgtttttcattaaagacaaaattatactttggaagcagtgtat-ataatattaattgaatggtacaa 12566076  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| | ||| ||||||    
T  12566077 ttgaaaaaaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 12566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 4658229 - 4658388
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa--ttatactttggaagtagtgtaacatagtattaattgaagggtat 139  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  | |||||||| ||||||||| | ||||||||||||||||||||     
T  4658229 attttaccaaattgtcctaatcaactattggtttgtttttcattaaagaaaaaaattaatactttgaaagtagtgt-atatagtattaattgaagggtac 4658327  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||||||| ||||| ||| |||||  |||||| | ||| ||||||    
T  4658328 aattgaaaagaaaaaattattattacattgaaaaatgaaaaagacattcattttgaaacaa 4658388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 36685739 - 36685895
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||| |||  |||||||||   |||||||||||||||||||| ||    
T  36685739 attttaccaaattatcctaatcaattattggtttg-ttttcatcaaagaaaaaataatattttcaaagtagtgttt-atagtattaattgaagggtacaa 36685836  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| ||||||||| ||| |||| ||||||| ||||| | ||||||||||    
T  36685837 ttgaaaagaaaaaattattattgtatttgaaattgaaagtaacattcattttaaaacaa 36685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 42743209 - 42743080
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||||||  |||||||| ||||||||||    
T  42743209 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaattattgatttgttttttattaaagaaaaaa-aatactttgaaagtagtgta 42743111  T
Q  117 acatagtattaattgaagggtataattgaaa 147  Q
    ||||| ||||||||||||| || ||||||||    
T  42743110 acataatattaattgaaggatacaattgaaa 42743080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 43480870 - 43481011
Alignment:
Q  45 ttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattg 144  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||| | | |||||||||| || ||||||||||    
T  43480870 ttactaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatactttggaagttgtgt-ataaagtattaattaaaaggtataattg 43480968  T
Q  145 aaaagaaaaagttattat-tgcattggaa-actgaaagtgaca 185  Q
    |||||||||||||||||| ||||||| || ||||||| |||||    
T  43480969 aaaagaaaaagttattatatgcattgaaacactgaaaatgaca 43481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 43971644 - 43971502
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||                ||||||||| | ||    
T  43971644 attttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagta----------------attgaagggcacaa 43971561  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  43971560 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 43971502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 19164509 - 19164387
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||   ||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||| | ||| ||||||||||||| || ||    
T  19164509 attttaccaaattat---aatcaactattggtttgttattcattaaagaaaaaataatactttgaaagtagtgt-atataatattaattgaaggatacaa 19164414  T
Q  142 ttgaaaagaaaaagttattattgcatt 168  Q
    || ||||||||||||||||||||||||    
T  19164413 ttaaaaagaaaaagttattattgcatt 19164387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 7028846 - 7028967
Alignment:
Q  78 ttttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    |||| |||||||||||||| |||||||| ||||||||||  |||||||||||||||||||| | ||||||||||||||| |||||||||||||||| |||    
T  7028846 tttttattaaagaaaaaataatactttgaaagtagtgtat-atagtattaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtga 7028944  T
Q  178 aagtgacatttagtttaaaacaa 200  Q
    || ||||||| | ||| ||||||    
T  7028945 aaatgacattcattttgaaacaa 7028967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 19636689 - 19636587
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| || |||||||    
T  19636689 aataaagtagtcaaatgtcataacaattttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaataatactttgaaaatagtgta 19636590  T
Q  117 aca 119  Q
    |||    
T  19636589 aca 19636587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 19835282 - 19835180
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| || |||||||    
T  19835282 aataaagtagtcaaatgtcataacaattttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaataatactttgaaaatagtgta 19835183  T
Q  117 aca 119  Q
    |||    
T  19835182 aca 19835180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 45301864 - 45301763
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||  |||||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  45301864 atactttaaaagtagtgta-cacagtattaattgatgggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaa 45301766  T
Q  198 caa 200  Q
    |||    
T  45301765 caa 45301763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 43427334 - 43427442
Alignment:
Q  91 aaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttag 190  Q
    |||||| ||||||||||||||| ||  || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |     
T  43427334 aaaaataatactttggaagtagcgtg-caaagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcat 43427432  T
Q  191 tttaaaacaa 200  Q
    ||| ||||||    
T  43427433 tttgaaacaa 43427442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 27964425 - 27964512
Alignment:
Q  99 tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27964425 tactttggaagtagtgtgt-atagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacatt 27964512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 34546120 - 34546232
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgt 115  Q
    ||||| ||||| ||||||||||  ||||||| ||||||||||||||||||||||| |||| |||||||||||| ||||||| || |||||||||||||||    
T  34546120 aataaagtagtcaaatgtcataataattttatcaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatcctttggaagtagtgt 34546219  T
Q  116 aacatagtattaa 128  Q
    |||||| ||||||    
T  34546220 aacatattattaa 34546232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 16463086 - 16463176
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacattta 189  Q
    ||||||||||||||||||  ||  ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16463086 atactttggaagtagtgtg-cagggtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattta 16463176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 29411826 - 29411694
Alignment:
Q  67 tattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgca 166  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| ||||| ||||  ||| |||||||||||||||| |||| ||||||||| ||||||||||||    
T  29411826 tattggtttgtttttccttagagaaaaaataatattttgaaagtaatgtat-ataatattaattgaagggtacaattaaaaagaaaaggttattattgca 29411728  T
Q  167 ttggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| ||||| ||||||||||| | ||||||||||    
T  29411727 ttgaaaactaaaagtgacattcattttaaaacaa 29411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 11132703 - 11132569
Alignment:
Q  45 ttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattg 144  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||||||| ||| |||| ||||| ||| | |||||||||||| |||| || |||||    
T  11132703 ttaccaaattattataatcaactatttgtttgtttttcattaaagaaaaaataatattttgaaagtaatgt-atatagtattaattaaaggatacaattg 11132605  T
Q  145 aaaa-gaaaaagttattattgcattggaaactgaaa 179  Q
    ||||  ||||||||||||||| ||| ||||||||||    
T  11132604 aaaataaaaaagttattattgaatttgaaactgaaa 11132569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 33056046 - 33055956
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||| | |||||||||||||||    
T  33056046 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatacattgaaagtagtgt-atatagtattaattgaa 33055956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 35799301 - 35799201
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||| |||||||||  |||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||    
T  35799301 atactttgaaagtagtgtg-cataatattaattggagggtacaattgaaaa-aaaaagttattattgcattggaaactgaaagtgacatttattttgaaa 35799204  T
Q  198 caa 200  Q
    |||    
T  35799203 caa 35799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 10195830 - 10195730
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||| |||||||||||||| | |||  ||||||||||||||| ||    
T  10195830 attttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataatattttggaagtagtgt-atatatcattaattgaagggtacaa 10195732  T
Q  142 tt 143  Q
    ||    
T  10195731 tt 10195730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 40608603 - 40608745
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| ||| |||   |||||||| | |||  ||||||| |||  || ||    
T  40608603 attttaccaaattatcctaatcaactataagtttgtttttcattaaagaaaaaataatattttaatagtagtgt-atataagattaattaaagtatacaa 40608701  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  40608702 ttg-aaagagaaagttattattgcatt-gaaactgaaagtgacatt 40608745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 4051757 - 4051859
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaag-ttattattgcattggaaactgaaagtgacatttagtttaaa 196  Q
    |||||||| |||||||||| |||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||||||||||||||| | ||| ||    
T  4051757 atactttgaaagtagtgta-catagtattaattggaaggtacaattgaaaagaaaaaaattattattgcattggaaactgaaagtgacattcattttgaa 4051855  T
Q  197 acaa 200  Q
    ||||    
T  4051856 acaa 4051859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 17695879 - 17695965
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  17695879 atactttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattatcacattggaaactgaaagtgaca 17695965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 22620388 - 22620474
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    ||||||||||||||||||  |  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22620388 atactttggaagtagtgtc-ctgagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagcgaca 22620474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 200
Target Start/End: Original strand, 33482230 - 33482384
Alignment:
Q  45 ttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattg 144  Q
    |||||||||||||||| |||||| |||||||| |||| ||||| |||||| | ||||||| ||| || ||||  ||| |||||||||||| ||| | |||    
T  33482230 ttaccaaattatcctattcaacttttggtttgttttttattaaggaaaaattaatactttcgaaataatgtat-atattattaattgaagagtacagttg 33482328  T
Q  145 aaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||  ||||||| ||||| ||| | ||||||||||| | ||||||||||    
T  33482329 aaaagaaaaaaatattattacattgaaaaataaaagtgacattcattttaaaacaa 33482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 34546410 - 34546529
Alignment:
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||| | ||| ||||||        |||||||||||||||    
T  34546410 attaattgaagggtacaatttaaaagaaaaaattattattgcattggaaattgaaagtgacattcattttgaaacaa-tttttttggttaaaacgacact 34546508  T
Q  224 tattttaaaacggagggagta 244  Q
     ||||| ||||||||||||||    
T  34546509 cattttgaaacggagggagta 34546529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 7042220 - 7042341
Alignment:
Q  78 ttttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    |||| |||||||||||||  |||||||| ||||||||||  |||||||||||||||||||| | || |||||||||||| ||||||||||||| || |||    
T  7042220 tttttattaaagaaaaaagaatactttgaaagtagtgtat-atagtattaattgaagggtacatttaaaaagaaaaagtcattattgcattgggaagtga 7042318  T
Q  178 aagtgacatttagtttaaaacaa 200  Q
    || ||||||| | ||| ||||||    
T  7042319 aaatgacattcattttgaaacaa 7042341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 27726417 - 27726510
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||| |||||||||| ||| | ||| ||||||||||||||||    
T  27726417 attttaccaaattatcctaatcaactattggtttgtttttcattaa--aaaaaataataatttggaagtaatgt-atatactattaattgaagggta 27726510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 36178051 - 36177974
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| | ||| ||||||    
T  36178051 tattaattgaagggtacaattgaaaaaaaaaagttattattgcattggaaacggaaagtgacattcattttgaaacaa 36177974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 45423717 - 45423637
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||||||||||||||  |||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  45423717 atactttggaagtagtgtg-catagtattaattcgagggaatatttgaaaagaaaaagttattattgcattggaaactgaaa 45423637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 4469576 - 4469499
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||| | ||||||||||    
T  4469576 tattaatttaagggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgaaattcattttaaaacaa 4469499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 5717611 - 5717512
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||   | ||||||||||| ||| || |||| |||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  5717611 atactttggaagtagtgtgt-agagtattaattggagg-tacaattaaaaagaaaaatttattattgcattggaaactgaaagtgacattcattttaaaa 5717514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 35046593 - 35046516
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||| |  |||||||||    
T  35046593 tattaattgaagggtataattaaaaattaaaagttattattgcattggaaattgaaagtgacattcatcttaaaacaa 35046516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 7874720 - 7874795
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||| | |||||||    
T  7874720 agtattaattgaagggtacgattgaaaagaaaaagttattattgcattggaaac-aaaagtgacattaattttaaaa 7874795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 18717257 - 18717157
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||| |||| ||||||||| |||||||||||||||| |||||||||| ||||||||||| || |||| | |||||  ||||||||||    
T  18717257 aataatgtagtcaaatgccataacaattttacaaaattatcctaatcaattattggtttgtttttcattaaaaaataaataaaactttaaaagtagtgta 18717158  T
Q  117 a 117  Q
    |    
T  18717157 a 18717157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 7872774 - 7872866
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagg 135  Q
    ||||||||||||||| || ||| ||||||| |||| ||||||||||||||||||| |||||||| ||||||| |   |||||||||||||||||    
T  7872774 attttaccaaattattctgatcgactattgatttgtttttcattaaagaaaaaataatactttgaaagtagtat-ttatagtattaattgaagg 7872866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 11188546 - 11188634
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||  |||| |||||||||| | || ||||||||| || |||||||| |||||||| |||||||||||||||||    
T  11188546 atactttggaagtagtgtat-ataggattaattgaatgatacaattgaaaaaaataagttattgttgcattgaaaactgaaagtgacatt 11188634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 14286014 - 14285949
Alignment:
Q  122 gtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  14286014 gtattaattggagggtacaattgaaaaaaaaaagttattattgtattggaaactgaaaatgacatt 14285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 7644721 - 7644657
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||| | |||||||||||||||    
T  7644721 tattaattgaagggtacaattgaaaagaaaaagttattattatattgaatactgaaagtgacatt 7644657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 16792541 - 16792481
Alignment:
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  16792541 aattgaaaagaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaa 16792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 27964222 - 27964282
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatact 102  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||    
T  27964222 attttaccaaattattttaatcaactattggtttgtttttcattaaagaaaaaataatact 27964282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 34455846 - 34455790
Alignment:
Q  43 ttttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattat 99  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  34455846 ttttaccaaattatcctaatcaactactggtttaatttttattaaagaaaaaattat 34455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 15083227 - 15083286
Alignment:
Q  120 tagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||    
T  15083227 tagtattaattgaagagtacaattgaaaataaaatgttattattgcattggaaactgaaa 15083286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 11188247 - 11188301
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaat 96  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  11188247 attttaccaagttatcctaatcaactattgggttgtttttcattaaagaaaaaat 11188301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 28072669 - 28072565
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaa---gttattattgcattggaaactgaaagtgacatttagttta 194  Q
    |||||||||||||||||| | | ||||||||||| ||| ||  |||||||| |||||   |||||||||| |||| ||||||||||||||||| | ||||    
T  28072669 atactttggaagtagtgtga-agagtattaattggaggatacgattgaaaaaaaaaaaaagttattattgtattgaaaactgaaagtgacattcatttta 28072571  T
Q  195 aaacaa 200  Q
    ||||||    
T  28072570 aaacaa 28072565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 17703071 - 17703017
Alignment:
Q  146 aaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||    
T  17703071 aaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 17703017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 777879 - 777768
Alignment:
Q  93 aaattatactttggaagtagtgtaac--atagtattaattgaagggtataattgaaaagaaaaa--gttattattgcattggaaactgaaagtgacattt 188  Q
    |||| ||| |||||||||||||||    |||||||| ||||||||||| | ||||| |||||||  |||||||||||||| |||| ||||| |||||||     
T  777879 aaataatattttggaagtagtgtatataatagtattgattgaagggtacatttgaacagaaaaaaggttattattgcattagaaattgaaaatgacattc 777780  T
Q  189 agtttaaaacaa 200  Q
    | ||||||||||    
T  777779 attttaaaacaa 777768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 27726542 - 27726595
Alignment:
Q  46 taccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattat 99  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  27726542 taccaaattatcctaattaactattagtttgtttttcattaaaaaaaaaattat 27726595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 19469673 - 19469575
Alignment:
Q  50 aaattatcctaatcaactattggtttgattttcattaaagaa--aaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaa 147  Q
    |||||||| ||||||| ||||| |||| ||||||||||||||  ||||| ||||||||||| || ||| | ||| ||||||||||| |||| ||||||||    
T  19469673 aaattatcgtaatcaattattgatttgtttttcattaaagaaaaaaaataatactttggaactaatgt-atataatattaattgaatggtacaattgaaa 19469575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 9391614 - 9391700
Alignment:
Q  100 actttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||| ||||||||||  ||| |||||||| ||||  | ||||||||||||||| |||||||||||||  ||||||||| |||||||    
T  9391614 actttgaaagtagtgtat-ataatattaattaaaggtcacaattgaaaagaaaaaattattattgcattaaaaactgaaaatgacatt 9391700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 10195642 - 10195572
Alignment:
Q  130 tgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||| ||||||||| |||| ||||||||||||||| ||| | ||||| ||||| | ||||||||||    
T  10195642 tgaagggtacaattgaaaataaaatgttattattgcattgaaaattaaaagtaacattcattttaaaacaa 10195572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 14833837 - 14833890
Alignment:
Q  147 aagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||| |||||||| ||| ||||||||||||| | ||||||||||    
T  14833837 aagaaaaagttattgttgcattgaaaattgaaagtgacattcattttaaaacaa 14833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 27986137 - 27986034
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaa---gttattattgcattggaaactgaaagtgacatttagttta 194  Q
    |||||||||||||||||| | | ||||||||||| ||| ||  |||||||| |||||   ||| |||||| |||| ||||||||||||||||| | ||||    
T  27986137 atactttggaagtagtgtga-agagtattaattggaggatacgattgaaaaaaaaaaaaagtt-ttattgtattgaaaactgaaagtgacattcatttta 27986040  T
Q  195 aaacaa 200  Q
    ||||||    
T  27986039 aaacaa 27986034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 14833757 - 14833791
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttg 76  Q
    ||||||||||||||||| |||||||||||||||||    
T  14833757 attttaccaaattatcccaatcaactattggtttg 14833791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 14286128 - 14286165
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagtacaaat 249  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14286128 taaaacgacactcattttaaaacggaggaagtacaaat 14286165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 35046646 - 35046609
Alignment:
Q  151 aaaagttattattgcattggaaactgaaagtgacattt 188  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  35046646 aaaagttattattgcattggaaactaaaagtgatattt 35046609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 9366230 - 9366274
Alignment:
Q  156 ttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| ||||| ||||| ||||||||||||| ||||||||||    
T  9366230 ttattatttcattgaaaacttaaagtgacatttattttaaaacaa 9366274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 12342302 - 12342334
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  12342302 taaaacgacactcattttaaaacggagggagta 12342334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 42970097 - 42970129
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||| ||||||    
T  42970097 taaaacgacacttattttaaaacggaaggagta 42970129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 5e-75; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 4760531 - 4760756
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||    
T  4760531 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaa-taatactttgaaagtagtgta 4760629  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||| | ||||||||||        || |||||    
T  4760630 acatagtattaattgaagggtacaattgaaaagaaaaaattattgttgcattggaaaatgaaagtgacattcattttaaaacaa-tttttttggctaaaa 4760728  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||||||||||||||||||||||||    
T  4760729 cgacacttattttaaaacggagggagta 4760756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 39698638 - 39698864
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  39698638 aataaagtagtcaaatgttatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgta 39698737  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||        || |||||    
T  39698738 acatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa-tttttttggctaaaa 39698836  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  39698837 cgacactcattttgaaacggagggagta 39698864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 39463438 - 39463213
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  39463438 aataaagtagtcaaatgtcgtagcaattttaccaa-ttatcctaatcaactgttggtttgtttttcattaaagaaaaaataatactttggaagtagtgta 39463340  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
      |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||        || |||||    
T  39463339 t-atagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggctaaaa 39463241  T
Q  217 cgacacttattttaaaacggagggagta 244  Q
    ||||||| ||||| ||||||||||||||    
T  39463240 cgacactcattttgaaacggagggagta 39463213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 246
Target Start/End: Original strand, 9880485 - 9880701
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9880485 aaatgtcatagcaattttacgaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaa 9880584  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattt 228  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||| | ||| ||||||        |  |||||||||||| ||||    
T  9880585 ttgaagggcataattgaaaagaaaaaattattattgcattggaaactgtgagtgacattcattttgaaacaa-tttttttgactaaaacgacactcattt 9880683  T
Q  229 taaaacggagggagtaca 246  Q
    ||||||||||||||||||    
T  9880684 taaaacggagggagtaca 9880701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 17921131 - 17920904
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatag 122  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||     
T  17921131 tagtcaaatgtcatagcaattttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacataa 17921032  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacac 222  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||         | ||||||||||     
T  17921031 tattaattgaagagtacaattgtaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaatttttttttgctaaaacgacat 17920932  T
Q  223 ttattttaaaacggagggagtacaaata 250  Q
    | ||||||||||||||||| ||| ||||    
T  17920931 tcattttaaaacggagggactactaata 17920904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 40228755 - 40228572
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  40228755 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtaatgta 40228656  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  40228655 acataatattaattgaaatgtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 40228572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 43084599 - 43084779
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||  |||||||||||||||    
T  43084599 aataaagtagtcaaatgtcatagtaattttaccaaattaccctaatcaactattggtttgtgtttcattaaagaaaaaataattttttggaagtagtgta 43084698  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  43084699 acatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 43084779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 4989659 - 4989476
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| ||||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||    
T  4989659 aataaagtagtcaaatatcatagcaattttcccaaattatcctactcaactattgatttgtttttcattaaagaaaaaataatactttgtaagtagtgta 4989560  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||    
T  4989559 acataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgatattcattttgaaacaa 4989476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 43448897 - 43448714
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||| ||||    
T  43448897 aataaagtagtcaaatgtcatatcaattttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatactttgaaagtaatgta 43448798  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    || ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| | ||| ||||||    
T  43448797 acgtagtattaattgaagggtacaattgaaaaaaaaaagttattattgcattggaaactgaaagtgatattcattttgaaacaa 43448714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 31693591 - 31693826
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaact---attggtttgattttcattaaagaaaaaattatactttggaagtagt 113  Q
    ||||| ||||| |||||||||| ||||||||| ||||||||||||||||||   ||| ||||| ||||||||||||| ||||| ||||||||||| ||||    
T  31693591 aataaagtagtcaaatgtcataacaattttactaaattatcctaatcaactggtattagtttgtttttcattaaagataaaataatactttggaa-tagt 31693689  T
Q  114 gtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggtta 213  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||        | |||    
T  31693690 gtaacataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttaaaacaaattttttggatta 31693789  T
Q  214 aaacgacacttattttaaaacggagggagtacaaata 250  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  31693790 aaacgacacttattttaaaacggagagagtaaaaata 31693826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 30 - 183
Target Start/End: Original strand, 31899233 - 31899386
Alignment:
Q  30 aatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaat 129  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  31899233 aatgtcataacaattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaagataatactttggaagtagtgtaacataatattaat 31899332  T
Q  130 tgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  31899333 tgaagagtacaattgaaaagaaaaaattattattgcattggaaactgaaagtga 31899386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 244
Target Start/End: Original strand, 9304613 - 9304832
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||| |||||||||||| |||||||      
T  9304613 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattgatttgtttttc-ttaaagaaaaaataatattttggaagtagtataacataac 9304711  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||| | ||| ||||||          |||||||||||||    
T  9304712 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtcacattcattttgaaacaattttttttaattaaaacgacact 9304811  T
Q  224 tattttaaaacggagggagta 244  Q
     |||||||||||||| |||||    
T  9304812 cattttaaaacggagagagta 9304832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 29025733 - 29025888
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||| ||||||||   |||||||||||||||    
T  29025733 aaatgtcatagcaattttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatacattggaagt---gtaacatagtattaa 29025829  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  29025830 ttgaagggtagaattgaaaagaaaaagttattattgcattggaaacttaaagtgacatt 29025888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 44713715 - 44713532
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| ||||  ||||||||||||||||||| ||| |||| ||||||||||    
T  44713715 aataaagtagtcaaatgtcatagcaactttaccaaattatcataatcaactattagtttatttttcattaaagaaaaaataatattttgaaagtagtgta 44713616  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | ||||||||||    
T  44713615 acacaatattaattgaagggtataattgaaaaaaaaaagttattattgcattggaaaatgaaagtgatattcattttaaaacaa 44713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 7839639 - 7839456
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| ||||  |||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||    
T  7839639 aataaagtagtcaaatatcatgacaattttaccgaattatcttaatcaactattggtttatttttcattaaagaaaaaataatattttggaagtagtgta 7839540  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| ||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  7839539 acataatattaattgaaaggtaaaattgaaaagaaaaggttattattgcattggaaattgaaagtgacattcattttgaaacaa 7839456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 9812328 - 9812171
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| | ||| ||||| ||||| |||| ||    
T  9812328 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaattgtactttgaaagtagtgt-atataatattacttgaaaggtacaa 9812230  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  9812229 ttgaaaataaaaagttattattgcattagaaactgaaagtgacattcattttaaaacaa 9812171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 6374568 - 6374412
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||| | ||| ||||||||||| |||| ||    
T  6374568 attttaccaaattatcataatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtaatgt-atataatattaattgaa-ggtacaa 6374471  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  6374470 ttgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 6374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 34156690 - 34156535
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||    
T  34156690 attttatcaaattatcataatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtagtgt-acatagtattaattgaagggtacaa 34156592  T
Q  142 ttgaaaag-aaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||| ||||| ||||||||||||||||||| | |||||| ||| | |||||||    
T  34156591 ttgaaaagaaaaaaattattattgcattggaaaccgtaagtgatattcattttaaaa 34156535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 19438365 - 19438245
Alignment:
Q  70 tggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcatt 168  Q
    ||||||| ||||||||||||||||||| | || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  19438365 tggtttgtttttcattaaagaaaaaataaatattttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattacatt 19438266  T
Q  169 ggaaactgaaagtgacattta 189  Q
    ||||||||| |||||||||||    
T  19438265 ggaaactgagagtgacattta 19438245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 19574514 - 19574395
Alignment:
Q  71 ggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattg- 169  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||     
T  19574514 ggtttgtttttcattaaagaaaaaataatattttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattacattgc 19574415  T
Q  170 gaaactgaaagtgacattta 189  Q
    |||||||| |||||||||||    
T  19574414 gaaactgagagtgacattta 19574395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 5295403 - 5295548
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||||||||||||||||||||||||||||| |||| |||| ||||| ||||||| || || |||||||||||||||  ||| |||||||||||||||| |    
T  5295403 attttaccaaattatcctaatcaactattgctttgttttttattaatgaaaaaaataatattttggaagtagtgtat-ataatattaattgaagggtaca 5295501  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||    
T  5295502 attgaaaagaaaaaattattattgcattagaaacttaaagtgacatt 5295548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 515032 - 514875
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta-aca-tagtattaattgaagggtat 139  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| |||||| || |||||| |||||||||||| | | || ||||||||||||| ||     
T  515032 attttagcaaattatcctaatcaactattggtttgtttttcattatagaaaatataatacttcggaagtagtgtatatagtattattaattgaaggatac 514933  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||| | |||||||    
T  514932 aattgaaaagaaaaaattattattgcattgaaaattgaaagtgacattcattttaaaa 514875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 13367946 - 13368147
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||| |||||||||||||| || ||||||  ||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||  ||    
T  13367946 attttaccatattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaattgaagggtgcaa 13368044  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggaggga 241  Q
    |||||||||||| ||||||||||| ||||||| ||| | ||| |   | ||| ||||||        ||||||||| ||||| |||||||||||||||||    
T  13368045 ttgaaaagaaaatgttattattgcgttggaaattgataatgatacccattttgaaacaattttttttggttaaaacaacactcattttaaaacggaggga 13368144  T
Q  242 gta 244  Q
    |||    
T  13368145 gta 13368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 5790625 - 5790772
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaag--aaaaaattatactttggaagtagtgtaacata 121  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||| ||| |||| ||||||||||| |||    
T  5790625 tagtcaaatatcgtagcaattttaccaaattatcctaatcaactattggtttgcttttcattagagaaaaaaaataatattttgaaagtagtgtaagata 5790724  T
Q  122 gtattaattgaagggtataattgaaaagaaaaagttattattgcattg 169  Q
     ||||||||||||| || |||||||||||||| | ||||||| |||||    
T  5790725 atattaattgaaggataaaattgaaaagaaaaggctattattacattg 5790772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 34796679 - 34796813
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||   |||  ||||||||||||||  ||    
T  34796679 attttatcaaattatcctaatcaactattggtttgtttttcattaaa-aaaaaataatactttggaagtagtgt---atataattaattgaagggttcaa 34796774  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaag 180  Q
    ||||||||||||| ||||||||||||| |||||| ||||    
T  34796775 ttgaaaagaaaaaattattattgcattagaaactaaaag 34796813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 14234213 - 14234373
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta-aca-tagtattaattgaagggtat 139  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||| | | || |||||| | |||||||     
T  14234213 attttgccaaattatcctaatcaactattggtttgtttttcgttaaagaaaaaataatattttggaagtagtgtatatagtattattaactaaagggtac 14234312  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||| ||||  ||||||||||||| |||| | ||||||||||| | ||||||||||    
T  14234313 aattgaaaaaaaaatattattattgcattagaaattaaaagtgacattcattttaaaacaa 14234373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 45358892 - 45359034
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||| ||||||  |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||   || ||    
T  45358892 attttaccgaattattttaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgt-atataatattaattgaaaaatacaa 45358990  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    ||||||||||||| |||||||||||||| ||| ||||| |||||    
T  45358991 ttgaaaagaaaaaattattattgcattgaaaattgaaaatgaca 45359034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 13496393 - 13496254
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta---tactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    |||||||||||||||||||||||| |||||||||| ||||| || |||||||||| |   ||||||||||||||||| | | |||||||||||||  |||    
T  13496393 attttaccaaattatcctaatcaattattggtttgtttttctttcaagaaaaaataatactactttggaagtagtgt-atacagtattaattgaattgta 13496295  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
     |||||||||||||| ||||||||||||||||||| |||||    
T  13496294 caattgaaaagaaaacgttattattgcattggaaattgaaa 13496254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 196
Target Start/End: Original strand, 29312197 - 29312344
Alignment:
Q  51 aattatcctaatcaactattggtttgattttcattaaagaaaaaattatact---ttggaagtagtgtaacatagtattaattgaagggtataattgaaa 147  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| |||||   |  |||||||||||  |||||||||||||||| ||| ||||||||    
T  29312197 aattatactaatcaactattggtttgtttttcattaaagaaaaaataatactacttctgaagtagtgtat-atagtattaattgaagagtacaattgaaa 29312295  T
Q  148 agaaaaagttattattgcattggaaactgaaagtgacatttagtttaaa 196  Q
    | |||  ||||||||||||||||||||||||| ||||||| | ||||||    
T  29312296 acaaacggttattattgcattggaaactgaaaatgacattcattttaaa 29312344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 200
Target Start/End: Original strand, 6116020 - 6116160
Alignment:
Q  53 ttatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaa 152  Q
    ||||| |||||||||||||||||| ||||||||||| |||||      | ||||||||||||||  ||||||||||  ||||||||||||||||||||||    
T  6116020 ttatcttaatcaactattggtttgtttttcattaaaaaaaaa------ccttggaagtagtgtat-atagtattaaacgaagggtataattgaaaagaaa 6116112  T
Q  153 aagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||| |||| |||||||| ||| | ||||||||||    
T  6116113 aagttattattgcattgaaaaccgaaagtgatattcattttaaaacaa 6116160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 15160504 - 15160601
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  15160504 tttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 15160601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 35356391 - 35356326
Alignment:
Q  114 gtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35356391 gtaacataatattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaa 35356326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 15750327 - 15750435
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgta-aca-tagtattaattgaagggta 138  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||| | | || ||||||||||||||||    
T  15750327 attttaccaaattatcctaatcaactattggtttatttttcattaaagaaaaaaataatactttggaagtagtgtatatagtattattaattgaagggta 15750426  T
Q  139 taattgaaa 147  Q
     ||||||||    
T  15750427 caattgaaa 15750435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 41679467 - 41679338
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||  |||||||        |||||| ||||||  || ||    
T  41679467 attttaccaaattatcataatcaactattggtttgattttcattaaagaaaaaataatattttaaaagtagt--------gtattagttgaagaataaaa 41679376  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    || |||||||||||||||||||| |||| |||||||||    
T  41679375 ttaaaaagaaaaagttattattgtattgaaaactgaaa 41679338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 36669766 - 36669845
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaat 96  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  36669766 aataaagtagtcaaatatcatagcaattttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaat 36669845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 37559609 - 37559688
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  37559609 agtattaattggagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattgattttaaaacaa 37559688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 40362512 - 40362433
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  40362512 agtattaattggagggtaaaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 40362433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 40399875 - 40399967
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagg 135  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||| | ||| |||||||||||||    
T  40399875 attttaccaaattatcataatcaactattagtttgtttttcattaaagaaaaaataatactttgaaagtagtgt-atataatattaattgaagg 40399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 15227725 - 15227565
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa---ttatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    |||||| |||||||| ||||||||  ||| ||||| ||||||||||||||||||   | |||||||| |||| |||||  |||||||||||||||| |||    
T  15227725 attttatcaaattattctaatcaatcattagtttgtttttcattaaagaaaaaaaaataatactttgaaagttgtgtat-atagtattaattgaagtgta 15227627  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
      |||||||||||| | |||||||||||||| ||  ||||||||||||| | ||| ||||||    
T  15227626 ccattgaaaagaaacatttattattgcattgaaatttgaaagtgacattcattttgaaacaa 15227565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 39765914 - 39766014
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| | | |||||||||||||||||||||||||| ||||||||||||||||| | ||| |||    
T  39765914 atactttggaagtagtgtg-cagagtattaattggagggtacagt-gaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaa 39766011  T
Q  198 caa 200  Q
    |||    
T  39766012 caa 39766014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 31233939 - 31234081
Alignment:
Q  44 tttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattg-aagggtataat 142  Q
    ||||| |||| |||||||||||||||||||||  |||||||||||| |||||| ||| ||| ||||||  || | ||| ||||||||| |||| || |||    
T  31233939 tttacaaaatcatcctaatcaactattggtttatttttcattaaaggaaaaataataatttagaagtaccgt-atataatattaattgaaaggatacaat 31234037  T
Q  143 tgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||| || ||||||||||||||||  ||||| |||||||||||    
T  31234038 tgaaaa-aagaagttattattgcattaaaaactaaaagtgacatt 31234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 17656006 - 17655918
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||| |||||||||  || ||||||||||| |||||| | |||||||||||||||||||||||||||| |||||||| || |||||    
T  17656006 atactttgcaagtagtgtg-cagagtattaattggagggtacagttgaaaagaaaaagttattattgcattgaaaactgaaggtaacatt 17655918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 396290 - 396369
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactg-aaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||  |||||| ||||||||||| | ||||||||||    
T  396290 agtattaattga-gggtacaattgaaaagaaaaagttattattgcatttcaaactgaaaagtgacattcattttaaaacaa 396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 42179250 - 42179155
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    ||||||| |||||||| |||| ||||||| ||||| ||||||||||||||||||| |||||||  || |||||| | ||||||||||||||| ||||    
T  42179250 attttactaaattatcataattaactattagtttgtttttcattaaagaaaaaataatacttttaaaatagtgt-atatagtattaattgaatggta 42179155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 43974885 - 43974933
Alignment:
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43974885 taattgaaaagaaaaagttattattgcattggaaactaaaagtgacatt 43974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 43970049 - 43970123
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||||||||| ||||||| |||||| ||||    
T  43970049 attttatcaaattatcctaatcaactattgatttgtcttttattaaagaaaaaataatactttagaagtaatgta 43970123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 36921434 - 36921371
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgac 184  Q
    ||||||||||| | |||| ||||||||||||||| |||||||||||||| ||| ||||||||||    
T  36921434 agtattaattggaaggtacaattgaaaagaaaaaattattattgcattgaaaattgaaagtgac 36921371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 43724475 - 43724379
Alignment:
Q  104 tggaagtagtgtaacatagtattaattgaagggtataattgaa-aagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||  || ||||||||||| | |||| ||||||| || ||||| |||||||||||||||||||||||||||| ||| | ||| ||||||    
T  43724475 tggaagtagtgtg-cagagtattaattggaaggtacaattgaagaaaaaaaaattattattgcattggaaactgaaagtgaaattcattttgaaacaa 43724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 44342865 - 44342918
Alignment:
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    ||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||    
T  44342865 attaattaaagggtacaattgaaaagaaaaagttattattatattggaaactga 44342918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 2375844 - 2375996
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| |||||| || |||||||  ||||||||| |||||||||||||||||     |  |||||| |||||| | ||| |||||||||||||||| |     
T  2375844 attttatcaaattgtcttaatcaatcattggtttgtttttcattaaagaaaaa-----aaattggaaatagtgt-atatattattaattgaagggtacag 2375937  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    || |||||| |||||| |||||| |||  ||||||||| ||| | | | ||||||||||    
T  2375938 ttaaaaagataaagttgttattgtattaaaaactgaaaatgataatcattttaaaacaa 2375996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 40400066 - 40400118
Alignment:
Q  135 ggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||| ||||||||||||||| ||||| |||||||||||||| ||||| |||||    
T  40400066 ggtacaattgaaaagaaaaaattattgttgcattggaaactaaaagtcacatt 40400118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 40400505 - 40400441
Alignment:
Q  135 ggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    |||| ||||||||||||||| ||||||||  ||| |||||| ||||||||||| | |||||||||    
T  40400505 ggtacaattgaaaagaaaaaattattattatattagaaactaaaagtgacattcattttaaaaca 40400441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 36915570 - 36915605
Alignment:
Q  209 ggttaaaacgacacttattttaaaacggagggagta 244  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36915570 ggttaaaacgacactcattttaaaacggagggagta 36915605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 43561478 - 43561408
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtag 112  Q
    |||||| ||||||||| |||||||  |||  |||  ||||||||||||||||||| |||||||| ||||||    
T  43561478 attttatcaaattatcttaatcaatcattaatttatttttcattaaagaaaaaataatactttgaaagtag 43561408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 9022604 - 9022637
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagtac 245  Q
    |||||||||||| |||||||||||||||||||||    
T  9022604 taaaacgacactcattttaaaacggagggagtac 9022637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 24 - 244
Target Start/End: Original strand, 24719 - 24939
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||    
T  24719 tagtcaaatgtcatagcaattttaccaaactatcctaatcaactattggtttgtttttcattaaagaaaagataatactttggaagtattgtaacatagt 24818  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||        || ||||||||||||    
T  24819 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggataaaacgacact 24918  T
Q  224 tattttaaaacggagggagta 244  Q
     ||||| ||||||| ||||||    
T  24919 cattttgaaacggatggagta 24939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 3e-73; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 44676402 - 44676219
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  44676402 aataaagtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaactagtgta 44676303  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||    
T  44676302 acacagtattaattggagggtacaattgaaaagaaaaagttatcattgcattggaaactgaaagtgacattcattttgaaacaa 44676219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 45213691 - 45213874
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  45213691 aataaagtagtcaaatgtcatagcaattttaccaaattattctaatcaactattggtttgcttttcattaaagaaaaaataatactttgaaagtagtgta 45213790  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  45213791 atatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactgaaagtgacattcattttaaaacaa 45213874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 47895313 - 47895496
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||    
T  47895313 aataaagtagtcatatgtcatagcaattttaccaaattatcctaatcaactatttgtttgcttttcattaaagaaaaaataatactttggaaatagtgta 47895412  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  47895413 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 47895496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 38016555 - 38016373
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  38016555 aataaagtagtcaaatgtcatagtaattttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgta 38016456  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  38016455 acatagtattaattgaa-ggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 38016373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 2458190 - 2458005
Alignment:
Q  16 caataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtg 114  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||    
T  2458190 caataaagtagtaaaatgtcatagcaattttaccaaattatcctaatcaactattggtttaattttcattaaagaaaaaaacaatactttggaagtagtg 2458091  T
Q  115 taacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  2458090 taatatagtattaattgaagggtataattaaaaagaaaaagttattattgtattggaaactgaaagtgacattcattttgaaacaa 2458005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 23525285 - 23525468
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  23525285 aataaagtagtcaaatgtcataacaattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtaatgta 23525384  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||   ||||| ||||||| ||||||||||    
T  23525385 acatagtattaattgaagggtatagttgaaaagaaaaacttattattgcattggaaatcaaaagtaacatttattttaaaacaa 23525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 29 - 244
Target Start/End: Complemental strand, 51398179 - 51397964
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  51398179 aaatgttataacaattttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaa 51398080  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattt 228  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||| ||||||        || |||||||||||| ||||    
T  51398079 ttgaagggtacaattgaaaagaaaaagttattattacattgaaaactaaaagtgacatttattttgaaacaattttttttggctaaaacgacactcattt 51397980  T
Q  229 taaaacggagggagta 244  Q
    ||||||||| ||||||    
T  51397979 taaaacggatggagta 51397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 33194000 - 33194227
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||    
T  33194000 aataaagtagtcaaatgtcataacaattttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtaatgta 33194099  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaa 216  Q
    ||||| |||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||         | |||||    
T  33194100 acataatattaattgaagggtacaattaaaaataaaaagttatcattgcattggaaactgaaagtgacattcattttaaaacaatttttttt-gctaaaa 33194198  T
Q  217 cgacacttattttaaaacggagggagtac 245  Q
    ||||||| ||||||||| |||||||||||    
T  33194199 cgacactcattttaaaatggagggagtac 33194227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 41287477 - 41287694
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||| ||||||||| ||||||    
T  41287477 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttctttttcattaaagaaaaaaaaatactttggaagtaatgtaacataatattaa 41287576  T
Q  129 ttgaagggtataattgaaaagaaaaagttat---tattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacactta 225  Q
    |||||||||||||||||||||||||||||||   ||||||| ||||||| |||||||||||| | ||| ||||||        || ||||||||||||||    
T  41287577 ttgaagggtataattgaaaagaaaaagttattagtattgcactggaaaccgaaagtgacattcattttgaaacaa-tttttttggctaaaacgacactta 41287675  T
Q  226 ttttaaaacggagggagta 244  Q
    |||| ||||||||||||||    
T  41287676 ttttgaaacggagggagta 41287694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 23 - 200
Target Start/End: Original strand, 30426298 - 30426476
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacata 121  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||  | || ||||||||||||||||||||    
T  30426298 gtagtcaaatgtcatagcaattttaccaaattatcttaatcaactattggtttgtttttcattgaagaaaaaaaaaatattttggaagtagtgtaacata 30426397  T
Q  122 gtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||    
T  30426398 gtattaattgaagggtacaattaaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 30426476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 35557734 - 35557955
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatc-----ctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||||||||||||||||||||||||||||     ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  35557734 aaatgtcatagcaattttaccaaattatcatatcctaatcaactattggtttatttttcattaaagaaaaaataatactttggaagtagtgtaacatagt 35557833  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    | |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||| || || ||||||||||           |||| |||||||    
T  35557834 aataattgaaaggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgatatatattttaaaacaatttttttttcctaaatcgacact 35557933  T
Q  224 tattttaaaacggagggagtac 245  Q
     |||||||||||||||||||||    
T  35557934 cattttaaaacggagggagtac 35557955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 11393726 - 11393543
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||  |||| |||||||| ||||||||||||||||||||||| |||| | || |||||||||||||| |||||||||||||||||||    
T  11393726 aataaagtagtcaaataccataacaattttatcaaattatcctaatcaactattgatttgttattaattaaagaaaaaataatactttggaagtagtgta 11393627  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||    
T  11393626 acattgtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattgaaaatgacattcattttaaaacaa 11393543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 50088297 - 50088468
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||| |||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  50088297 aaatatcatggcaactttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaattaatactttgaaagtagtgtaacatagtattaa 50088396  T
Q  129 ttgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||| || | ||||||||||    
T  50088397 ttgaagggtacaattgaaaagaaaaagttactattgcattggaaactaaaagtgacgttcattttaaaacaa 50088468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 53200650 - 53200832
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||  ||||||| ||||||||||    
T  53200650 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattagtttgcttttcattaaggaaaaaatagtactttgaaagtagtgta 53200749  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||  ||| |||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||    
T  53200750 acataatattaattgaa-tgtacaattgaaaagaaaaagttattattgcattgaaaactaaaagtgacattcattttaaaacaa 53200832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 30431301 - 30431131
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||| |||||||||||||||||||    
T  30431301 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattgacttgtttttcattagagaaaaaataatactttggaagtagtgta 30431202  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    | ||| ||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  30431201 atataatattaattgaaggttacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacatt 30431131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 36460986 - 36460821
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||| ||    
T  36460986 aataaagtagttaaatatcatagtaattttaccaaattatcctaatcaactattggtttgtttttcatcaaagaaaaa-taatactttggaagtagtata 36460888  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  36460887 acataatattaattgaagggtgcaattgaaaagaaaaagttattattgcattgaaaactgaaagtga 36460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 31853538 - 31853714
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||||||||    
T  31853538 tagtcaaatgtcataacaattttatcaaattatcctaatcaactattggtttgtctttcattaaagaaaaaataatactttgaaagtagtgtaacatagt 31853637  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||| |||  |||||||||| ||||||||| | |||||||| ||||||||||||| ||| ||||||    
T  31853638 attaattgaagggtacaataaaaaagaaaaaattattattgtactggaaactaaaagtgacatttattttgaaacaa 31853714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 47138146 - 47137961
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa--ttatactttggaagtagtg 114  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||  | ||| |||||||||| ||    
T  47138146 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaattattcgtttgtttttcattaaagaaaaaaaataatattttggaagtactg 47138047  T
Q  115 taacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||| ||| ||||||| | ||||||||||    
T  47138046 taacatagtattatttgaagggtacaattgaaaataaaaagttattattgcattgaaaactaaaaatgacattcattttaaaacaa 47137961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 3152776 - 3152958
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| | |||||||| |||||||||| |||||| |||||||| |||||||||| |||| ||||||||||| |  ||| |||||||||||||||    
T  3152776 aataaagtagtcagatgtcataacaattttacccaattattctaatcaattattggtttgttttt-attaaagaaaataaaatattttggaagtagtgta 3152874  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  3152875 acatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 3152958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 38363960 - 38363796
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaa 128  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  38363960 aaatgtcatagcaattttaccaaattatcctaataaaccgttggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacgtagtattaa 38363861  T
Q  129 ttgaagggtataattgaaaagaaaaa------gttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||| ||||||||| |||||      ||||||||||||||| |||||||||||||||||    
T  38363860 ttgaagggtacaattgaaaaaaaaaaaaaaaggttattattgcattgtaaactgaaagtgacatt 38363796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 30315465 - 30315307
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaa-gtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||  ||||||||||||||||||||||    
T  30315465 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttttgaaagtagtgtat-atagtattaattgaagggtata 30315367  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||| |||||||||||||||| ||||||||||||| |||||||||||| | ||| ||||||    
T  30315366 attcaaaagaaaaagttattcttgcattggaaacggaaagtgacattcattttgaaacaa 30315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 41850562 - 41850388
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||       |||||||||    
T  41850562 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttg-ttttcattaaagaaaaaaa-ata-------agtagtgta 41850472  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||    
T  41850471 acataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgtcattcattttaaaacaa 41850388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 32492158 - 32492333
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||| ||||| |||||||| ||||||||||||||||| ||||| |||  |||| |||||||||||||| ||| |||||||||||||||||| |||    
T  32492158 tagtcaaatatcataacaattttatcaaattatcctaatcaattattgattttttttt-attaaagaaaaaataatattttggaagtagtgtaacaaagt 32492256  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | ||| ||||||    
T  32492257 attaattgaatggtataattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttgaaacaa 32492333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 36729826 - 36729949
Alignment:
Q  64 aactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattatt 163  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36729826 aactattggtttgtttttcattaaataaaaaataatactttggaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaagttattatt 36729925  T
Q  164 gcattggaaactgaaagtgacatt 187  Q
    |||||||||| |||||||||||||    
T  36729926 gcattggaaattgaaagtgacatt 36729949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 36844737 - 36844935
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||| || | |||||||||||||||| || |||||||||||||||||| | ||| ||||||||||| | || ||    
T  36844737 attttaccaaattatcctaatcaactattgattagtttttcattaaagaaaacataatactttggaagtagtgt-atataatattaattgaatgatacaa 36844835  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggaggga 241  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||   ||| ||||||         |||||||||||||| |||||||||||||||||    
T  36844836 ttgaaaagaaaaaattattattgcattgaaaactgaaagtgacattggttttgaaacaattattttttgttaaaacgacactcattttaaaacggaggga 36844935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 38141105 - 38140961
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| | ||    
T  38141105 attttaccaaattattctaatcaattattggtttgtttttcattaaagaaaaaattatattttggaagtagtgt-atatagtattaattgaagggcacaa 38141007  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |  |||| |||| |||||||||||||||||||||||||||||||||    
T  38141006 tgaaaaaaaaaaggttattattgcattggaaactgaaagtgacatt 38140961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 45566980 - 45566828
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||| |||  ||||| ||||    
T  45566980 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaacaatattttaaaagtaatgta 45566881  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattg 169  Q
    | ||||||||||||||| | || ||||||||||||||||||||||||| ||||    
T  45566880 atatagtattaattgaatgatacaattgaaaagaaaaagttattattgtattg 45566828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 33024289 - 33024449
Alignment:
Q  37 tagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    ||||||||||| ||||||||| ||||||||||||| |||| ||| |||||||||| |||| |||| ||| ||| ||||||||||| ||||||||||| ||    
T  33024289 tagcaattttatcaaattatcttaatcaactattgatttgttttccattaaagaagaaataatacgttgaaagcagtgtaacataatattaattgaatgg 33024388  T
Q  137 tataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |  ||||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||    
T  33024389 tgcaattgaaaagataaagttattattgcattggaaactgaaagtaacattcattttaaaa 33024449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 9189430 - 9189584
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| ||| |||||||||| ||||  ||||||||||||||| | ||||     
T  9189430 attttaccaaatcatcgtaatcaactattggtttgttttttattaaagaaaaaataatattttggaagtaatgtat-atagtattaattgaatgatatat 9189528  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||    
T  9189529 ttgaaaagaaaaagttattatttcattgaaaactgaaagtgacattcattttaaaa 9189584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 19373741 - 19373599
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| | ||  |||||||||||||||| ||    
T  19373741 attttaccaaattctcctaatcaactattggtttgtttttcattaaagaaaaaataaaactttggaagtagtgt-atatgatattaattgaagggtacaa 19373643  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgaca 185  Q
    ||||||| |||||||||||||| ||||| ||| |||||||||||    
T  19373642 ttgaaaataaaaagttattatttcattgaaaattgaaagtgaca 19373599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 30934804 - 30934958
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||| ||||||| |||||||||| ||||||||||||| ||||| ||||||| |||||||||| | |||||||||||||| ||||| ||    
T  30934804 attttatcaaattatcataatcaaatattggtttgtttttcattaaagataaaataatactttagaagtagtgt-atatagtattaattgaggggtacaa 30934902  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| ||||||||||||||||||||||   ||||||| | ||||||||||    
T  30934903 ttgaaaagaaaaaattattattgcattggaaactga---tgacattcattttaaaacaa 30934958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 48903441 - 48903284
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||  ||||||||||||| |||| |||| |||||||||||||| ||||| || || |||||||  ||||||||||||| |||||| ||    
T  48903441 attttatcaaattattttaatcaactattgctttgtttttaattaaagaaaaaataatactatgaaattagtgtat-atagtattaattggagggtacaa 48903343  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||    
T  48903342 ttgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 48903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 39359101 - 39358998
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  39359101 aataaagtagtcaaatgtcataacaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagtagtgta 39359002  T
Q  117 acat 120  Q
    ||||    
T  39359001 acat 39358998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 42072140 - 42071983
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||| |||||||| ||||||||||||| |||| ||| |||||||||||| || ||||||| |||||| ||||  ||| |||||||||||||||| |     
T  42072140 attttactaaattatcataatcaactattgatttgttttccattaaagaaaacataatactttagaagtaatgtat-ataatattaattgaagggtacag 42072042  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||  | ||||||||||    
T  42072041 ttgaaaagaaaaagttattattgcattggaaactaaaaatgacatccattttaaaacaa 42071983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 48901858 - 48901718
Alignment:
Q  59 taatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagtta 158  Q
    ||||||||||||| |||| |||| |||||||||||||| ||||| || || |||||||  ||||||||||||| |||||| |||||||||||||||||||    
T  48901858 taatcaactattgctttgtttttaattaaagaaaaaataatactatgaaattagtgtat-atagtattaattggagggtacaattgaaaagaaaaagtta 48901760  T
Q  159 ttattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||| ||||||| | ||| ||||||    
T  48901759 ttattgcattggaaactgaaaatgacattcattttgaaacaa 48901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 13756842 - 13756970
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||  ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||  ||||| ||||    
T  13756842 aataaagtagtcaaatgttgtagcaattttagcaaattatcctaatcaactattggtttgttttttattaaagaaaaaataatactttaaaagtaatgta 13756941  T
Q  117 acatagtattaattgaagggtataattga 145  Q
    ||||| |||||||||||||||| ||||||    
T  13756942 acataatattaattgaagggtacaattga 13756970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 39356978 - 39356883
Alignment:
Q  105 ggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  39356978 ggaagtagtgtaacatagtattaattgaaaggtacaattgaaaagaaaatgttattattgcattgaaaactgaaagtgacatttattttaaaacaa 39356883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 40487983 - 40487839
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||  ||||||||||||  |||| |||||  |||||||||||| ||||||| |||||||||||  ||||||||||||||| |||| ||    
T  40487983 attttatcaaattattataatcaactattaatttgtttttcgataaagaaaaaataatactttagaagtagtgtat-atagtattaattgaaaggtacaa 40487885  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||||||||||||||||   |||||||||||    
T  40487884 ttgaaaagaaaaagttattattgcattggaaatcaaaagtgacatt 40487839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 50646154 - 50646306
Alignment:
Q  91 aaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttag 190  Q
    |||||| ||||||| |||||| ||||  |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  50646154 aaaaataatacttttgaagtaatgtat-atagtattaattaaatggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttat 50646252  T
Q  191 tttaaaacaannnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
    ||| ||||||         |||||||||||||| ||||||||||||| ||||||    
T  50646253 tttgaaacaatttttttttgttaaaacgacactcattttaaaacggaaggagta 50646306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 27067759 - 27067634
Alignment:
Q  44 tttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataatt 143  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| | |   |||| |||| |||||   ||||||||||||||||||| ||||    
T  27067759 tttaccaaattatcctaatcaactattggtttg-ttttcattaaagaaaaa-taaagttttgaaagttgtgtatg-tagtattaattgaagggtacaatt 27067663  T
Q  144 gaaaagaaaaagttattattgcattggaa 172  Q
    |||||||||||||||||||||||||||||    
T  27067662 gaaaagaaaaagttattattgcattggaa 27067634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 50346780 - 50346624
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||| |||| |||||||| |||| ||||||||||||||||||| |||  ||||||||| ||| |  || |||| ||||||||||| ||    
T  50346780 attttatcaaattatcttaattaactattgatttgtttttcattaaagaaaaaataatatgttggaagtaatgt-atttattattgattgaagggtacaa 50346682  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| | ||||||||||||| ||||| ||| ||||||||||||| ||||||    
T  50346681 ttgaaaagaaaatg-tattattgcattgaaaactcaaaatgacatttagtttgaaacaa 50346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 51482096 - 51481964
Alignment:
Q  37 tagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    ||||||||||| |||||||||||||| ||| |  | ||   ||||||||||||||||||| || ||||||||||| ||||||||| |||||||| || ||    
T  51482096 tagcaattttatcaaattatcctaataaacaaaagattattttttcattaaagaaaaaataatgctttggaagtaatgtaacataatattaattaaaagg 51481997  T
Q  137 tataattgaaaagaaaaagttattattgcattg 169  Q
    ||||||||||| |||||| ||||||||||||||    
T  51481996 tataattgaaatgaaaaaattattattgcattg 51481964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 4759068 - 4758989
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  4759068 agtattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacatttattttaaaacaa 4758989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 7230897 - 7231035
Alignment:
Q  50 aaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta-aca-tagtattaattgaagggtataattgaaa 147  Q
    ||||||||||||||||||||||||||  || |||||||||||||| | ||| ||| ||||||||||| | | |||||||||||||| | || ||||||||    
T  7230897 aaattatcctaatcaactattggtttctttctcattaaagaaaaa-taataatttcgaagtagtgtatatagtagtattaattgaatgatacaattgaaa 7230995  T
Q  148 agaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||||||| | |||| |||||||||||    
T  7230996 agaaaaagttattattgcattcgtaactaaaagtgacatt 7231035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 36381341 - 36381474
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaa--aaattatactttggaagtagtg 114  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||| |||  | || |||||||  ||||| ||    
T  36381341 aataaagtagtcaaatgtcatagcaattttaccaaattatcttaatcatctattgatttgtttttcattaaaaaaaatatataatactttaaaagtaatg 36381440  T
Q  115 taacatagtattaattgaagggtataattgaaaa 148  Q
    ||| ||||||||||||||||| || |||||||||    
T  36381441 taatatagtattaattgaaggatacaattgaaaa 36381474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 42571580 - 42571681
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | ||| |||    
T  42571580 atactttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgcaagtgacattcattttgaaa 42571678  T
Q  198 caa 200  Q
    |||    
T  42571679 caa 42571681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 50038222 - 50038323
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||| ||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  50038222 atactttagaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaa 50038320  T
Q  198 caa 200  Q
    |||    
T  50038321 caa 50038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 4392291 - 4392150
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaan 201  Q
    |||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||| ||||||| | ||| ||||||     
T  4392291 tttggaagtagtatat-atagtattaattgaagggtacaattgaaaagaaaaagttattattaaattggaaactgaaactgacattcattttgaaacaat 4392193  T
Q  202 nnnnnnnggttaaaacgacacttattttaaaacggagggagta 244  Q
            | |||||||||||| ||||||||||||||| ||||    
T  4392192 tattttttgctaaaacgacactcattttaaaacggaggtagta 4392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 19115485 - 19115385
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||    
T  19115485 atactttggaagtagtgtg-cagagtattaattggagg-tataattgaaaagaaaaagttattattgcattggaaactcaaagtgacattcattttgaaa 19115388  T
Q  198 caa 200  Q
    |||    
T  19115387 caa 19115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 22857209 - 22857088
Alignment:
Q  78 ttttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    |||| |||||||||||||| ||| ||| |||||||||||  ||| |||||||||||  ||| |||||||||||||||||||||||| ||||| |||  ||    
T  22857209 tttttattaaagaaaaaataatattttagaagtagtgtat-ataatattaattgaacagtacaattgaaaagaaaaagttattattacattgaaaatcga 22857111  T
Q  178 aagtgacatttagtttaaaacaa 200  Q
    |||||||||| | ||||||||||    
T  22857110 aagtgacattcattttaaaacaa 22857088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 31583485 - 31583586
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| | |||| ||||||||||||||  ||||||||||| |||||||||||||||||||| | |||||||    
T  31583485 atactttggaagtagtgtg-cagagtattaattggaaggtacaattgaaaagaaaagattattattgcactggaaactgaaagtgacattaattttaaaa 31583583  T
Q  198 caa 200  Q
    |||    
T  31583584 caa 31583586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 11019879 - 11019978
Alignment:
Q  102 tttggaagtagtgta-acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||| |||| | ||||||||||||||| ||||  |||||||||||||| |||||||||||||| ||| ||||||||||||| | ||||||||||    
T  11019879 tttggaagtaatgtacatatagtattaattgaaaggtacgattgaaaagaaaaaattattattgcattgaaaaatgaaagtgacattaattttaaaacaa 11019978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 8817296 - 8817139
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgt--aacatagtattaattgaagggtat 139  Q
    |||||| |||||||| |||||||||||||| |||  ||||||||||||||||||| |||| || ||||||||||  |  ||| |||||||| || ||||     
T  8817296 attttatcaaattattctaatcaactattgatttatttttcattaaagaaaaaataatacattagaagtagtgtgtataata-tattaattaaaaggtac 8817198  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    |||||||  |||||| ||||||||||||||  |||||||| | ||||| | |||||||||    
T  8817197 aattgaag-gaaaaaattattattgcattgataactgaaaataacattcattttaaaaca 8817139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 42886848 - 42886749
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  |||| ||||||||| ||||||  ||||||||||||||||||||||||||||||||| | ||||| ||||| | ||| |||    
T  42886848 atactttggaagtagtgtg-cataatattaattggagggta--attgaaaagaaaaagttattattgcattggaaatttaaagtaacattcattttgaaa 42886752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 40717665 - 40717793
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaa---attatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||   |  ||| ||||||||  |||| | ||| ||||  ||||||| ||    
T  40717665 attttaccaaattatcttaatcaactattggtttg-ttttcattaaagaaaaaaagaaaatattttggaagaggtgt-atataatatt-tttgaaggata 40717761  T
Q  139 taattgaaaagaaaaagttattattgcattgg 170  Q
    |||||||||||||||| |||||||| ||||||    
T  40717762 taattgaaaagaaaaaattattattacattgg 40717793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 45518460 - 45518553
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaa 117  Q
    |||| |||||||||| |||||||| ||||||||||||||||| ||||| | |  ||||||||||||||||| | |||||||| || ||||||||    
T  45518460 tagtcaaatgtcataacaattttatcaaattatcctaatcaattattgatatatttttcattaaagaaaaattaatactttgaaaatagtgtaa 45518553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 36729741 - 36729805
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgatttt 81  Q
    ||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  36729741 aataaagtagtcaaatatcataacaattttaccaaattatcctaatcaactattggtttgttttt 36729805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 200
Target Start/End: Original strand, 47823466 - 47823603
Alignment:
Q  66 ctattggtttgattttcattaaagaaaaaatta-tac---tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttatta 161  Q
    ||||||||||| ||| |||||||||||||| || |||   |||| || |||||||  ||||||||||||||||  || |||| |||||||||| ||||||    
T  47823466 ctattggtttgttttccattaaagaaaaaagtaatacaaatttgaaaatagtgtat-atagtattaattgaagaatacaattaaaaagaaaaaattatta 47823564  T
Q  162 ttgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||  ||||| ||| ||||||||| ||||||||||    
T  47823565 ttgcattaaaaactaaaaatgacatttattttaaaacaa 47823603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 52654360 - 52654313
Alignment:
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacattta 189  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  52654360 ttgaaaagaaaaagttattattgtattgaaaactgaaagtgacattta 52654313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 39168871 - 39168802
Alignment:
Q  33 gtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatact 102  Q
    ||||||| ||||||| |||||||||||||| |||||||  |||| ||||||||||| ||||||| |||||    
T  39168871 gtcatagtaattttatcaaattatcctaattaactattaatttgtttttcattaaaaaaaaaataatact 39168802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 45391939 - 45391980
Alignment:
Q  29 aaatgtcatagcaattttaccaaattatcctaatcaactatt 70  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  45391939 aaatgtcatagcaattttaccaaattatcataatcaactatt 45391980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 23208387 - 23208441
Alignment:
Q  144 gaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||||||||  ||||||||||||||||||||| | ||| ||||||    
T  23208387 gaaaagaaaaagttattattg--ttggaaactgaaagtgacattcattttgaaacaa 23208441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 45460743 - 45460692
Alignment:
Q  118 catagtattaattgaagggtataattgaaaagaaaaagttattattgcattg 169  Q
    |||| ||||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  45460743 cataatattaattggagggtacaattgaaaagaaagagttattattgtattg 45460692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 3986006 - 3985932
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    |||||||||||||||||| || ||||||||||||| ||| || ||||| |||| | ||||| ||| |||| ||||    
T  3986006 attttaccaaattatccttattaactattggtttgttttccactaaagtaaaagtaatactatgggagtaatgta 3985932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 37225761 - 37225794
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagtac 245  Q
    |||||||||||| |||||||||||||||||||||    
T  37225761 taaaacgacactcattttaaaacggagggagtac 37225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 4476306 - 4476274
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||| ||||||    
T  4476306 taaaacgacacttattttaaaacggaaggagta 4476274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 31290918 - 31290886
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  31290918 taaaacgacactcattttaaaacggagggagta 31290886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 42740431 - 42740463
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||| ||||||    
T  42740431 taaaacgacacttattttaaaacggaaggagta 42740463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 42886947 - 42886979
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  42886947 taaaacgacactcattttaaaacggagggagta 42886979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 51324143 - 51324191
Alignment:
Q  152 aaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| ||||| | ||||||| ||||||||| ||||||||||    
T  51324143 aaagttattattacattgaatactgaaaatgacatttattttaaaacaa 51324191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 53560875 - 53560907
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    ||||||||||||||||||||||||||| |||||    
T  53560875 taaaacgacacttattttaaaacggagagagta 53560907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 54403341 - 54403413
Alignment:
Q  125 ttaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||| |||||| || ||||||||||| ||||  |||||||| |||||| ||| ||||||| | |||||||    
T  54403341 ttaattggagggtacaaatgaaaagaaaatgttaacattgcatttgaaactaaaaatgacattcattttaaaa 54403413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 7e-71; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 234195 - 234032
Alignment:
Q  37 tagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  234195 tagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaaggg 234096  T
Q  137 tataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    || |||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  234095 tacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaacaa 234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 24 - 244
Target Start/End: Original strand, 24163693 - 24163912
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  24163693 tagtcaaatgtcatagcaattttatcaaattatccaaatcaactattagtttgtttttcattaaagaaataataatactttggaagtagtgtaacatagt 24163792  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    ||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||        || ||||| ||||||    
T  24163793 attaattgaaatgtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaacaa-tttttttggctaaaatgacact 24163891  T
Q  224 tattttaaaacggagggagta 244  Q
     ||||||||||||||||||||    
T  24163892 cattttaaaacggagggagta 24163912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 19675159 - 19674991
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  | ||||| ||||||||| |    
T  19675159 aataaagtagtcaaatgtcatagcaattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa--aaactttagaagtagtgca 19675062  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  19675061 acatagtattaattgaatggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacatt 19674991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 23259297 - 23259480
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||| || |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||||||||||    
T  23259297 aataaagtagtcaaatgtcgtaacaattttaccaaattatcctaatcaactattgatttgcttttcactaaagaaaaaataatactttggaagtagtgta 23259396  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||| ||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||| | ||| ||||||    
T  23259397 acataatattaatttaagggtacaattgaaaagtaaaagttatttttgcattggaaactgaaaatgacattcattttgaaacaa 23259480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 187
Target Start/End: Original strand, 29713384 - 29713548
Alignment:
Q  23 gtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatag 122  Q
    ||||| |||||| || | ||||||||  |||||||||||||||||||| ||||| |||| |||||||||||||| |||||||| ||||||||||||||||    
T  29713384 gtagtcaaatgttatggtaattttacataattatcctaatcaactattagtttgttttttattaaagaaaaaataatactttgaaagtagtgtaacatag 29713483  T
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  29713484 tattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaacggaaaatgacatt 29713548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 1135106 - 1134959
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||| |||||||||||||||    
T  1135106 aataaagtagtcaaatgtcatatcaattttaccaaattatcctaatcaactatttgtttgtttttctttaaagaaaaaataatattttggaagtagtgta 1135007  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattg 164  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||    
T  1135006 atatagtattaattgaagggtacaattgaaaagaaaaagttattattg 1134959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 9940803 - 9940646
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||   ||| |||||||||||||||| ||    
T  9940803 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgt-gtataatattaattgaagggtacaa 9940705  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||  ||||||||||||||||||| ||||||||||||||| | | ||||||||||    
T  9940704 ttgaaaaagaaaagttattattgcattgaaaactgaaagtgacaatcattttaaaacaa 9940646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 39 - 200
Target Start/End: Original strand, 31443439 - 31443601
Alignment:
Q  39 gcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||    
T  31443439 gcaattttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatactttggaagttatgtaacatagtattaattgaaaggta 31443538  T
Q  139 taattg-aaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
     ||||| |||| |||||||||||||||||||||||||||||| | ||||| | ||| ||||||    
T  31443539 caattgaaaaaaaaaaagttattattgcattggaaactgaaaataacattcatttttaaacaa 31443601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 3988741 - 3988881
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||||| ||| |||| ||  |||||||||||||||||||||||    
T  3988741 attttaccaaattatcataatcaactatttgtttgtttttcattaaagaaaaaataatacttttgaaatagtatat-atagtattaattgaagggtataa 3988839  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  3988840 ttgaaaagaaaaaattattattgcattggaaactgaaagtga 3988881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 12459316 - 12459460
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||  |||||||||||||| ||| | |||||||||||||||||||||||    
T  12459316 attttaccaaattatcctaatcaactattggtctgtttttcattaaagaaaaaacaatactttggaagtaatgt-atatagtattaattgaagggtataa 12459414  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||| |||||||| ||| ||||| ||||||||||||    
T  12459415 ttgaaaagaaaaagatattattgtattagaaaccgaaagtgacatt 12459460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 24555899 - 24556080
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgt 115  Q
    ||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||  | ||||||| || || |||    
T  24555899 aataaagtagtcaaatgtcgtagcaattttaccaaattatcataatcaactattgatttgtttttcattaaaaaaaaaaaaaatactttgaaaataatgt 24555998  T
Q  116 aacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||| ||||||||| ||||||||| |||||||    
T  24555999 aacatagtattaattgaagagtacaattgaaaagaaaaaattattattacattgaaaactgaaaatgacatttattttaaaa 24556080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 577217 - 577059
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || || |||||||||||||||  ||| ||||||||||||||||||    
T  577217 attttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttggaagtagtgtat-ataatattaattgaagggtata 577119  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||| || |||||||||||||||||| ||||||||||||| | ||| ||||||||||    
T  577118 attgaaatgataaagttattattgcattgaaaactgaaagtgatagttattttaaaacaa 577059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 32193835 - 32193665
Alignment:
Q  64 aactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattatt 163  Q
    ||||||||||||| ||| |||||||||||| || |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||    
T  32193835 aactattggtttgttttacattaaagaaaagataatactttggaagtagtgtat-atagtattaattgaagggtacaattgaaaagaaaaaattattatt 32193737  T
Q  164 gcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacacttattttaaaacg 235  Q
    ||||| |||||| ||||||||||||| ||||||||||        || |||||||||||| |||||||||||    
T  32193736 gcattagaaactaaaagtgacatttattttaaaacaaattattttggctaaaacgacactcattttaaaacg 32193665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 13503841 - 13503990
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaa--ttatactttggaagtagtgta-acatagtattaattgaagggta 138  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||  | |||||||| |||||||||| | ||||||||||||||||||||    
T  13503841 attttaccaaattatcctaataaactattg-tttgtttttcattaaagaaaaaaaataatactttgaaagtagtgtatatatagtattaattgaagggta 13503939  T
Q  139 taattgaaa--agaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
     ||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  13503940 caattgaaataaaaaaaagttattattgcattggaaactgaaagtgacatt 13503990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 18737087 - 18737245
Alignment:
Q  44 tttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattata---ctttggaagtagtgtaacatagtattaattgaagggtata 140  Q
    |||| |||||||||||||| |||||||| |||  ||||||||||||||||||| |||   ||||  ||||||||||  ||| |||||||| |||||||||    
T  18737087 tttatcaaattatcctaattaactattgttttatttttcattaaagaaaaaataatagtactttaaaagtagtgtat-ataatattaattaaagggtata 18737185  T
Q  141 attgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  18737186 attgaaaagaaagagttattattgcattggaaactgaaagtgacattcattttaaaacaa 18737245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 10540448 - 10540566
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||| ||||| ||||||||  |||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  10540448 aataaagtagtcaaatatcataacaattttattaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgta 10540547  T
Q  117 acatagtattaattgaagg 135  Q
    | |||||||||||||||||    
T  10540548 atatagtattaattgaagg 10540566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 17552243 - 17552387
Alignment:
Q  41 aattttaccaaattatcctaatcaactattggtttgattttcattaaag-aaaaaattatactttggaagtagtgtaacatagtattaattgaagggtat 139  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||| |||||||||||||| | |||||||||||| ||   ||     
T  17552243 aattttaccaaattatcctaatcaacaattggtttgtttttcattaaagaaaaaaataatattttggaagtagtgt-atatagtattaattaaaaattac 17552341  T
Q  140 aattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||| |||||  ||||||||||||||||||||||| |||||||    
T  17552342 aattgaaaaaaaaaa--tattattgcattggaaactgaaaatgacatt 17552387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 12063558 - 12063652
Alignment:
Q  93 aaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||| ||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  12063558 aaataatactttagaagtagtgtaacatagtatcaattgaagggtacaattgaaaaaaaaaaattattattgcattggaaactgaaagtgacatt 12063652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 12322881 - 12323026
Alignment:
Q  42 attttaccaaattatcctaatcaactattg---gtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    ||||||||||||||||||||| ||||||||    |||  |||||||||||||||| |  |||||||||||||||||| | |||||||||||||||||||     
T  12322881 attttaccaaattatcctaattaactattgattttttttttttcattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtg 12322979  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
     ||||||||  |||||  |||||||||||||||||||||||||||||||    
T  12322980 caattgaaataaaaaa--tattattgcattggaaactgaaagtgacatt 12323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 10520362 - 10520469
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||| || |||||||| ||||||| |||||||  ||||||||||    
T  10520362 aataaagtagtcaaatgtcatagcaattttaccaaattatcttaatcaaatattggattgtttctcattaaataaaaaataatactttaaaagtagtgta 10520461  T
Q  117 acatagta 124  Q
    ||||||||    
T  10520462 acatagta 10520469  T

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Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 13011345 - 13011495
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||   |||||||| ||||||||| | ||||||||||||||| |||| ||    
T  13011345 attttaccaaattatcttaatcaactatcggtttgtttttcattaaagaaaaa---atactttgaaagtagtgt-atatagtattaattgaacggtaaaa 13011440  T
Q  142 ttgaaaagaaa--aagttattattgcattggaaactgaaagtgacatttagttta 194  Q
    || |||| |||  |  ||||||||| |||| |||||||| |||||||||| ||||    
T  13011441 ttaaaaaaaaaatatattattattgtattgaaaactgaacgtgacatttatttta 13011495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 29400023 - 29399900
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgac 220  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||         | |||||||||    
T  29400023 agtattaattggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaattttttgttgctaaaacgac 29399924  T
Q  221 acttattttaaaacggagggagta 244  Q
    ||| ||||| ||||||||||||||    
T  29399923 actcattttgaaacggagggagta 29399900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 34513660 - 34513739
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagt 181  Q
    ||||||||||| ||||||||  |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  34513660 tttggaagtagggtaacataacattaattgaaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagt 34513739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 1502750 - 1502840
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||| ||| |||||||||||||| | |||||||||||||||    
T  1502750 attttaccaaattatcttaattaactattggtttgtttttcattaaataaaaaataatattttggaagtagtgt-atatagtattaattgaa 1502840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 4850553 - 4850650
Alignment:
Q  102 tttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||||||||  || ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  4850553 tttggaagtagtgtg-cagagtattaattggatggtacaattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 4850650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 10520717 - 10520794
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||| ||| ||||||||||||||| ||||||||||    
T  10520717 tattaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaattgaaagtgacatttattttaaaacaa 10520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 16128006 - 16128094
Alignment:
Q  44 tttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    |||| ||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||| |||||||||| | |||||||||||||||    
T  16128006 tttatcaatttatcctaatcaactatcggtttgtttttcattaaagaaaaaataatacttttgaagtagtgt-atatagtattaattgaa 16128094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 17828438 - 17828348
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaa 133  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||||||||||| | |||||||| ||| ||||| | |||||||||||||||    
T  17828438 attttaccaaattatcttaatcaaccattggtttgtttttcattaaagaaaaagtaatactttgaaagaagtgt-atatagtattaattgaa 17828348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 20226218 - 20226292
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| |||| |||| ||||||||||||||    
T  20226218 attttaccaaattatactaatcaactattgatttgtttttcattaaagaataaataatacattggaagtagtgta 20226292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 22120202 - 22120276
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| |||| |||| ||||||||||||||    
T  22120202 attttaccaaattatactaatcaactattgatttgtttttcattaaagaataaataatacattggaagtagtgta 22120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 31233700 - 31233780
Alignment:
Q  120 tagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||| |||||||||||| ||||||||||||||  ||||||||||| || ||||||||||||||||| | ||||||||||    
T  31233700 tagtatcaattgaagggtacaattgaaaagaaaatattattattgcaatgaaaactgaaagtgacattcattttaaaacaa 31233780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 12588680 - 12588527
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta---acatagtattaattgaagggta 138  Q
    |||||||||||||||| ||| ||||||||| |||  |||| ||||||   ||||| ||| ||| |||||| | ||   | ||| ||||||||||||||||    
T  12588680 attttaccaaattatcttaaccaactattgatttattttttattaaa---aaaataatagttttgaagtaatatatatatatattattaattgaagggta 12588584  T
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||| |||||  ||||||||||||||||||| ||||||||||| ||||| | |||||||    
T  12588583 taatagaaaa--aaaagttattattgcattgcaaactgaaagtaacattcattttaaaa 12588527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 244
Target Start/End: Original strand, 10540590 - 10540707
Alignment:
Q  126 taattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacactta 225  Q
    ||||||||||||| ||||||||  |||| ||||||||||||||||||| ||||||||||||||| ||| ||||||         | |||||||||||| |    
T  10540590 taattgaagggtacaattgaaac-aaaaggttattattgcattggaaattgaaagtgacatttattttgaaacaattttttttagctaaaacgacactca 10540688  T
Q  226 ttttaaaacggagggagta 244  Q
    |||||||||||||| ||||    
T  10540689 ttttaaaacggaggaagta 10540707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 17246678 - 17246727
Alignment:
Q  87 aagaaaaaattatactttggaagtagtgtaacatagtattaattgaaggg 136  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17246678 aagaaaaaataatactttggaagtagtgtaacatagtattaattgaaggg 17246727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 8957920 - 8957869
Alignment:
Q  45 ttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaat 96  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8957920 ttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaat 8957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 8961437 - 8961488
Alignment:
Q  45 ttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaat 96  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8961437 ttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaat 8961488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 17267609 - 17267731
Alignment:
Q  47 accaaattatcctaatcaactattggtttgattttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtataattga 145  Q
    |||||||||| |||||||| |||| ||||| |||| || |||||||||| || ||||||  || |||||||  ||| |||||||| ||||||| | ||||    
T  17267609 accaaattattctaatcaaatattagtttgttttttatcaaagaaaaaaataatactttaaaaatagtgtat-ataatattaattaaagggtacagttga 17267707  T
Q  146 aaagaaaaagttattattgcattg 169  Q
    ||||||||| ||||||||||||||    
T  17267708 aaagaaaaaattattattgcattg 17267731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 32429359 - 32429295
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||| | | || |||||||||||||||||||||||||||||||||| | |||||||||||    
T  32429359 tattaattggatgatacaattgaaaagaaaaagttattattgcattggaaattaaaagtgacatt 32429295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 19689407 - 19689357
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattgga 171  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  19689407 agtattaattgaagagtacagttgaaaagaaaaagttattattgcattgga 19689357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 21271400 - 21271469
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtag 112  Q
    ||||||||||| |||||||||||||||||| |||| | |||||||||| |||||| ||| |||||||||||    
T  21271400 attttaccaaagtatcctaatcaactattgatttgttcttcattaaag-aaaaataataatttggaagtag 21271469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 32619830 - 32619884
Alignment:
Q  50 aaattatcctaatcaactattggtttgattttcattaaagaaaaaattatacttt 104  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||    
T  32619830 aaattatcttaatcaactattgatttgtttttcattaaagaaaaaataatacttt 32619884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 8030714 - 8030653
Alignment:
Q  126 taattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||| | ||||||||||||| |||||||| ||||| ||||||||||| |||||    
T  8030714 taattgaagggtacagttgaaaagaaaaaattattattacattgaaaactgaaagtaacatt 8030653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 21272180 - 21272257
Alignment:
Q  123 tattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| ||||||||||||||||||| ||| | ||||||||||    
T  21272180 tattaattgaaatgtacgattaaaaagaaaatgttattattacattggaaactgaaagtgatattcattttaaaacaa 21272257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 1502833 - 1502893
Alignment:
Q  139 taattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaaca 199  Q
    |||||||||||||| | ||| |||||||||||||||||||| ||||||| | |||||||||    
T  1502833 taattgaaaagaaataattactattgcattggaaactgaaaatgacattaattttaaaaca 1502893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 32193965 - 32193931
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttg 76  Q
    |||||||||||||||||||||||||||||||||||    
T  32193965 attttaccaaattatcctaatcaactattggtttg 32193931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 3847738 - 3847704
Alignment:
Q  141 attgaaaagaaaaagttattattgcattggaaact 175  Q
    |||||||||||||| ||||||||||||||||||||    
T  3847738 attgaaaagaaaaaattattattgcattggaaact 3847704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 19600540 - 19600436
Alignment:
Q  78 ttttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    |||| |||||||||||||| ||| ||||||||||| ||| | ||  ||||||| || | || || |||| ||||||| |||||||||||| | ||||| |    
T  19600540 tttttattaaagaaaaaataatattttggaagtagcgtatc-taacattaattaaaagatacaaatgaagagaaaaaattattattgcatagaaaactta 19600442  T
Q  178 aagtga 183  Q
    ||||||    
T  19600441 aagtga 19600436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 24911432 - 24911469
Alignment:
Q  146 aaagaaaaagttattattgcattggaaactgaaagtga 183  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  24911432 aaagaaaaagttattaatgcattggaaactgatagtga 24911469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 23936527 - 23936495
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||| ||||||||||||||||||||    
T  23936527 taaaacgacactcattttaaaacggagggagta 23936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 29713574 - 29713606
Alignment:
Q  212 taaaacgacacttattttaaaacggagggagta 244  Q
    |||||||||||||||||||||||||||| ||||    
T  29713574 taaaacgacacttattttaaaacggaggaagta 29713606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 3483 - 3646
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  3483 tagtcaaatgttatagcaattttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagtagtgtaacatagt 3582  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3583 attaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacatt 3646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 9627 - 9796
Alignment:
Q  30 aatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaat 129  Q
    ||||||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9627 aatgtcataacaattttaccaaattatcataatcaactattgagttgtttttcattaaagaaaaaataata-tttggaagtagtgtaacatagtattaat 9725  T
Q  130 tgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  9726 tgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaa 9796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 9952 - 10110
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||| ||| |||||| ||| | |||||| ||||||||||||| ||    
T  9952 attttaccaaattatcttaatcaactattagtttgtttttccttaaagaaaaaataatatttttgaagtattgt-atatagtactaattgaagggtacaa 10050  T
Q  142 ttgaaaag-aaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    |||||||| ||||| ||||||| | |||| ||| ||||||||||||| | ||||||||||    
T  10051 ttgaaaagaaaaaaattattatagtattgaaaattgaaagtgacattcattttaaaacaa 10110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 24 - 244
Target Start/End: Original strand, 21060 - 21280
Alignment:
Q  24 tagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagt 123  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||  ||||||||||||||||||||||    
T  21060 tagtcaaacgtcatagcaattttaccaaattatcctaatcaactattggtttgtttttcattaaaaagaaaataatcatttggaagtagtgtaacatagt 21159  T
Q  124 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaannnnnnnnggttaaaacgacact 223  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||| | | ||||||| ||          |||||||||||||    
T  21160 attaattgaagggtacaattgaaaagaaaaaattattattgcatttgaaactgaaagtgacagtcattttaaaataatttttttttattaaaacgacact 21259  T
Q  224 tattttaaaacggagggagta 244  Q
     ||||||||||||| ||||||    
T  21260 cattttaaaacggatggagta 21280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 62814 - 62631
Alignment:
Q  17 aataaggtagttaaatgtcatagcaattttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgta 116  Q
    ||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| || | |||| ||||||||||||||    
T  62814 aataaagtagtcaaatgtcataacaattttaccaaattgtcctaatcaactattggtttgtttttcattaaagaagaagtaataccttggaagtagtgta 62715  T
Q  117 acatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaacaa 200  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||| | ||| ||||||    
T  62714 acataatattaattgaagggtacaattaaaaagaaaaagttattattacataggaaactgaaagtgacattcattttgaaacaa 62631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 569 - 723
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| ||||||||||||| |||  |||||||||||  |||||| |||||||||||||||||||  ||| |||||||||||||||| ||    
T  569 attttaccaaattatcataatcaactattgatttctttttcattaaaacaaaaataatactttggaagtagtgtat-ataatattaattgaagggtacaa 667  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    || ||||||||||||||||||||||||||||| || |||||||||| | |||||||    
T  668 ttaaaaagaaaaagttattattgcattggaaattgtaagtgacattcattttaaaa 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 18252 - 18396
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||| ||||||||  |||||||||||||||||| ||||||||||||| ||||| |||||||| || |||||||  ||| | |||||||||||||| ||    
T  18252 attttatcaaattattttaatcaactattggtttgtttttcattaaagataaaataatactttgaaaatagtgtat-ataatgttaattgaagggtacaa 18350  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  18351 ttgaaaagaaaaagttattattgcattggaaactgaaaatgacatt 18396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 1446 - 1568
Alignment:
Q  79 tttcattaaagaaaaaatta-tactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactga 177  Q
    ||||||||||||||||| || || |||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  1446 tttcattaaagaaaaaaataatattttggaagtagtgtaacataatattaaatgaagggtacaattgaaaagaaaaagttatcattgcattagaaactga 1545  T
Q  178 aagtgacatttagtttaaaacaa 200  Q
    |||||||||| | ||| ||||||    
T  1546 aagtgacattcattttgaaacaa 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 684 - 828
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||| ||||||||||||| | || ||||||||||||||||||  |  |||||||| |||||||  ||| |||||||| ||||||| ||    
T  684 attttaccaaattatcttaatcaactattgatatgtttttcattaaagaaaaaacaagtctttggaattagtgtat-ataatattaattaaagggtacaa 782  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||    
T  783 ttgaaaagaaaaaattattattccagtggaaactgaaagtgacatt 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 4296 - 4160
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    |||||||||||||||||| ||||||||||  |||| |||| ||||||| |||||  ||||||| |||||||||||  ||| |||||||||||||||| ||    
T  4296 attttaccaaattatccttatcaactattaatttgttttttattaaaggaaaaacaatactttagaagtagtgtat-ataatattaattgaagggtacaa 4198  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaa 179  Q
    ||||||||||||| |||||||||||||| ||| |||||    
T  4197 ttgaaaagaaaaaattattattgcattgaaaattgaaa 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 4720 - 4576
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaattatactttggaagtagtgtaacatagtattaattgaagggtataa 141  Q
    ||||||||||| |||||||||||||||||| |||| |||| ||||||| ||| || ||| |||||||||||||| | ||| |||| |||||| |||| ||    
T  4720 attttaccaaactatcctaatcaactattgatttgttttttattaaagtaaatataatattttggaagtagtgt-atataatattgattgaaaggtacaa 4622  T
Q  142 ttgaaaagaaaaagttattattgcattggaaactgaaagtgacatt 187  Q
    ||||||||||||| |||||||||||||  ||| | |||||||||||    
T  4621 ttgaaaagaaaaaattattattgcattaaaaattaaaagtgacatt 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 3864 - 3965
Alignment:
Q  98 atactttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||    
T  3864 atactttggaagtagtgtg-cagagtattaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaa 3962  T
Q  198 caa 200  Q
    |||    
T  3963 caa 3965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 589 - 665
Alignment:
Q  121 agtattaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttagtttaaaa 197  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  589 agtattaattgaagggtacaattgtaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 9700 - 9604
Alignment:
Q  42 attttaccaaattatcctaatcaactattggtttgattttcattaaagaa-aaaattatactttggaagtagtgtaacatagtattaattgaagggta 138  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| ||||||| | | ||||||||||||||||||||    
T  9700 attttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttgaaagtagtat-atatagtattaattgaagggta 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 9516 - 9474
Alignment:
Q  127 aattgaagggtataattgaaaagaaaaagttattattgcattg 169  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||    
T  9516 aattaaagggtacaattgaaaagaaaaaattattattgcattg 9474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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