View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11635_low_46 (Length: 344)
Name: NF11635_low_46
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 20 - 336
Target Start/End: Original strand, 39057647 - 39057962
Alignment:
| Q |
20 |
gctaagtcatcttccttttacattatttcatctgtagtctgacagccagacacattcatcgtcaagatcaggtggtccatggagaaaggtaatctcaggt |
119 |
Q |
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| T |
39057647 |
gctaagtcatcttccttttacattatttcatctgtagtctgacagccagacacattcatcgtcaagatcaggtggtccatggagaaaggtaatctcaggt |
39057746 |
T |
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| Q |
120 |
gttttgtttctatgttcacaatcgtcatactttattttctctcagaattatgacatggtgtatgcctaaatattgcacgattcatcgctgaaaatttcat |
219 |
Q |
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| T |
39057747 |
gttttgtttctatgttcacaatcgtcatacttt-ttttctctcagaattatgacattgtgtatgcctaaatattgcacgattcattgctgaaaatttcat |
39057845 |
T |
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| Q |
220 |
atatgacatgaatgaactttttccttaagtttttagcatagttttaagtgcagaaaaaggtaaacctagagatgcaaaaggagggaaacctctcaaatat |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
39057846 |
atatgacatgaatgaactttttccttaagtttttagcatagttttaagtgcagaaaaaggcaaacctagagatgcaaaaggagggaaacctctcaaatat |
39057945 |
T |
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| Q |
320 |
gtttcatttttctcatt |
336 |
Q |
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||||||||||||||||| |
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| T |
39057946 |
gtttcatttttctcatt |
39057962 |
T |
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