View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11635_low_50 (Length: 339)
Name: NF11635_low_50
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_low_50 |
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Alignment Details
Target: chr8 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 12145336 - 12145659
Alignment:
| Q |
1 |
ttgggagcaataaattcaatccacaattagaataatttttgtctaaattttacttatccttggaccaaagttcatgttactatttccctttccttatgaa |
100 |
Q |
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| T |
12145336 |
ttgggagcaataaattcaatccacaattagaataatttttgtctaaattttacttatccttggaccaaagttcatgttactatttccctttccttatgaa |
12145435 |
T |
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| Q |
101 |
ctagagttaagaaattgtaattgatgctgataatttatgttggtttataaagacaatctaccttcttatgaaataaaaatattatcttatcatatacata |
200 |
Q |
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| T |
12145436 |
ctagagttaagaaattgtaattgatgctgataatttatgttggtttataaagacaatctaccttcttatgaaataaaaatattatcttatcatatacata |
12145535 |
T |
|
| Q |
201 |
ttaaatatccaagtggcgggttccttatatcattacattcattgaatcattgcaggagtggactaaga-tttttgtaaaagggaaactaaaagcacagta |
299 |
Q |
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| T |
12145536 |
ttaaatatccaagtggcgggttccttatatcattacattcattgaatcattgcaggagtggactaagattttttgtaaaagggaaactaaaagcacaata |
12145635 |
T |
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| Q |
300 |
tcaaagatgaaagctttctgtatt |
323 |
Q |
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||||||||||||||||| |||||| |
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| T |
12145636 |
tcaaagatgaaagctttgtgtatt |
12145659 |
T |
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