View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11635_low_65 (Length: 280)
Name: NF11635_low_65
Description: NF11635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11635_low_65 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 21644027 - 21643781
Alignment:
| Q |
16 |
cagagacaacaatgtatgcttttttgccaactgttgatctgaatttttcaagaagtggtgaaagtgcttttacttcatcaactgaatgtgcataaaagag |
115 |
Q |
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| T |
21644027 |
cagagacaacaatgtatgcttttttgccaactgttgatctgaatttttcaagaagtggtgaaagtgcttttacttcatcaactgaatgtgcataaaagag |
21643928 |
T |
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| Q |
116 |
tgcatcaactttttgagggtacattgctgcccattgtgttatgtagccagatgaaagtgctttccaccattgatcatcgcgtacttgaactatgtctttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21643927 |
tgcatcaactttttgagggtacattgctgcccattgtgttatgtagccagatgaaagtgctttccaccattgatcatcgcgtacttgaactatgtctttg |
21643828 |
T |
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| Q |
216 |
aaaattactgttgtttcggatacgtaggctagtctgtgttcactatc |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21643827 |
aaaattactgttgtttcggatacgtaggctagtctgtgttcactatc |
21643781 |
T |
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