View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11636_low_2 (Length: 784)

Name: NF11636_low_2
Description: NF11636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11636_low_2
NF11636_low_2
[»] chr4 (4 HSPs)
chr4 (18-777)||(38177939-38178706)
chr4 (382-628)||(5531862-5532108)
chr4 (379-620)||(5921917-5922158)
chr4 (379-628)||(5935382-5935631)
[»] chr2 (1 HSPs)
chr2 (346-628)||(11733379-11733661)
[»] chr8 (5 HSPs)
chr8 (391-629)||(40917000-40917238)
chr8 (384-627)||(45319609-45319852)
chr8 (691-728)||(1639495-1639532)
chr8 (690-719)||(27733861-27733890)
chr8 (691-728)||(34201063-34201100)
[»] chr1 (2 HSPs)
chr1 (382-599)||(45453136-45453353)
chr1 (690-727)||(3921673-3921710)
[»] chr7 (3 HSPs)
chr7 (433-623)||(34840062-34840252)
chr7 (684-719)||(35917390-35917425)
chr7 (690-724)||(30516373-30516407)
[»] chr3 (2 HSPs)
chr3 (384-590)||(53146696-53146902)
chr3 (690-726)||(40150587-40150623)
[»] scaffold0037 (1 HSPs)
scaffold0037 (691-726)||(102912-102947)
[»] chr6 (3 HSPs)
chr6 (691-726)||(6299519-6299554)
chr6 (691-726)||(6306329-6306364)
chr6 (695-728)||(33135837-33135870)


Alignment Details
Target: chr4 (Bit Score: 715; Significance: 0; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 715; E-Value: 0
Query Start/End: Original strand, 18 - 777
Target Start/End: Original strand, 38177939 - 38178706
Alignment:
Q  18 ctttcctctgttccctttaaatgctatcttttcaatgataccaaatgtaccactttcactttatgtctctcat--------tttttattacatatctaac 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  38177939 ctttcctctgttccctttaaatgctatcttttcaatgataccaaatgtaccactttcactttatgtctctcattttttcattttttattacatatctaac 38178038  T
Q  110 acagttatctacaaaatttatctaccctggtctattctaatatattctattctgtctataaaagacatcaaataaattatgttctctcctatttgccaat 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38178039 acagttatctacaaaatttatctaccctggtctattctaatatattctattctgtctataaaagacatcaaataaattatgttctctcctatttgccaat 38178138  T
Q  210 cattatttaatcatctaatattcatcaaaatctaattatctaacagtaatactaataacaatcaaaatcaaaatttcaaggtatcataaaatgtacagga 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38178139 cattatttaatcatctaatattcatcaaaatctaattatctaacagtaatactaataacaatcaaaatcaaaattgcaaggtatcataaaatgtacagga 38178238  T
Q  310 taaactgcagtaaaattcaaacagaataaaggaatgataaacctacaagttggtgtggcaagcttcaatgtacggaagcaaatatcatagagtgcctcat 409  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38178239 taaactgcagtaaaattcaaaaagaataaaggaatgataaacctacaagttggtgtggcaagcttcaatgtacggaagcaaatatcatagagtgcctcat 38178338  T
Q  410 tgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctccacaactgtatctgaaaccttaggtgaagg 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38178339 tgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctccacaactgtatctgaaaccttaggtgaagg 38178438  T
Q  510 aaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccattccagaaccagttccacctcccaatgaa 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38178439 aaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccattccagaaccagttccacctcccaatgaa 38178538  T
Q  610 tgacacacttgaaatcctgttcacacattacaaatttctcaaacacacaacacataaagtagtttgtagcaccaaaatgagattacattgaattatatca 709  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  38178539 tgacacacttgaaatcctgttcacacattacaaatttctcaaacacacaacacataatgtagtttgtagcaccgaaaggagattacattgaattatatca 38178638  T
Q  710 ttttctcaaagtattattacgtcattttatcaaattatttacggcatgtcgtgtcaatgtctctgctt 777  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38178639 ttttctcaaagtattattacgtcattttatcaaattatttacggcatgtcgtgtcaatgtctgtgctt 38178706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 382 - 628
Target Start/End: Complemental strand, 5532108 - 5531862
Alignment:
Q  382 cggaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctcca 481  Q
    ||||||||||| ||||| |  || |||||||| | |||||||   ||||||||||||||||||||||| || ||||| ||||| |||||||| || || |    
T  5532108 cggaagcaaatgtcatacaaggcttcattgtcaagaaccatgacctcatctgcattttcaacaagctggtgaacagagagggtagcattgtagggttcaa 5532009  T
Q  482 caactgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccat 581  Q
    | || || || ||||||||||| ||||| || ||||| || || | |||||| |  || || || |||||||| ||||| ||||| ||||| ||||||||    
T  5532008 ccacagtgtcagaaaccttaggagaagggaaaacagagaaagtaagcatcatcctgtctgggtattcttccctgatctttgaaatcagaagagttcccat 5531909  T
Q  582 tccagaaccagttccacctcccaatgaatgacacacttgaaatcctg 628  Q
    |||||| |||||||| || || | ||| || || |||||||||||||    
T  5531908 tccagacccagttcctccaccaagtgagtggcatacttgaaatcctg 5531862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 379 - 620
Target Start/End: Original strand, 5921917 - 5922158
Alignment:
Q  379 gtacggaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggct 478  Q
    |||||||||||||||||||| |  || ||||| || | |||||| ||||||||||| |||||||||||||| || ||||| |  || |||||||| || |    
T  5921917 gtacggaagcaaatatcatacaaggcttcattatcaagaaccatacattcatctgcgttttcaacaagctggtgaacagataaagtagcattgtagggtt 5922016  T
Q  479 ccacaactgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcc 578  Q
    | || || || || ||||||||||| ||||| || ||||| || || | |||||| |  || || || |||||||| ||||| ||||| ||||| |||||    
T  5922017 caaccacagtgtcagaaaccttaggagaagggaaaacagagaaagtaagcatcatcctgtctgggtattcttccctgatctttgaaatgagaagggttcc 5922116  T
Q  579 cattccagaaccagttccacctcccaatgaatgacacacttg 620  Q
    ||||||||| |||||||| || || | ||||||||| |||||    
T  5922117 cattccagatccagttcctccacctagtgaatgacatacttg 5922158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 379 - 628
Target Start/End: Original strand, 5935382 - 5935631
Alignment:
Q  379 gtacggaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggct 478  Q
    |||||||| ||||||||||| |  || ||||| || | |||||| ||||||||||| |||||||||||||| || ||||| ||||| |||||||| || |    
T  5935382 gtacggaaacaaatatcatacaaggcttcattatcaagaaccatacattcatctgcgttttcaacaagctggtgaacagatagggtagcattgtagggtt 5935481  T
Q  479 ccacaactgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcc 578  Q
    | || || || || ||||||||||| ||||| || ||||| || || | |||||| | ||| || || |||||||| ||||| ||||| | ||| || ||    
T  5935482 caaccacagtgtcagaaaccttaggagaagggaaaacagagaaagtaagcatcatcctatctgggtattcttccctgatctttgaaatcaaaagggtacc 5935581  T
Q  579 cattccagaaccagttccacctcccaatgaatgacacacttgaaatcctg 628  Q
    ||||||||| |||||||| || || | |||||| || |||||||| ||||    
T  5935582 cattccagacccagttcctccaccaagtgaatggcatacttgaaaacctg 5935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 4e-77; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 346 - 628
Target Start/End: Original strand, 11733379 - 11733661
Alignment:
Q  346 ataaacctacaagttggtgtggcaagcttcaatgtacggaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaa 445  Q
    |||||| |||| |||||||| ||||||||||| || | ||| ||||||||||| || ||||| || ||||| |||||||||||||| ||||| |||||||    
T  11733379 ataaacttacatgttggtgtagcaagcttcaaagtcctgaaacaaatatcataaagagcctcgttatccaacaccatgcattcatccgcattctcaacaa 11733478  T
Q  446 gctgatgcacagaaagggttgcattgtaaggctccacaactgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggata 545  Q
    ||||||| |||||||| || ||||| || || || ||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11733479 gctgatgaacagaaagcgtggcattatacggttctacaaccgtatcagacaccttaggtgaaggaaacaccgaaaacgtcaacatcatacgatccggata 11733578  T
Q  546 ctcttccctaatcttcgaaataagaagtgttcccattccagaaccagttccacctcccaatgaatgacacacttgaaatcctg 628  Q
     ||||| | |||||||||||| | |||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||    
T  11733579 ttcttctcgaatcttcgaaatcaaaagtgttcccatgcctgaacccgtgccacctcccaatgaatgacacacttgaaatcctg 11733661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 7e-39; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 391 - 629
Target Start/End: Original strand, 40917000 - 40917238
Alignment:
Q  391 atatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctccacaactgtat 490  Q
    |||||||||||||||||||| || | |||||||||||| |||||||||||||| || ||||| ||||| || ||||||||||| || ||||| || ||||    
T  40917000 atatcatagagtgcctcattatcaagaaccatgcattcgtctgcattttcaactagttgatgaacagagagagttgcattgtagggttccaccacggtat 40917099  T
Q  491 ctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccattccagaacc 590  Q
    | |||||||| |||||||| ||||| || || ||||||||||| |  || ||||||||||| || ||||| ||||| || |  || |||||||| || ||    
T  40917100 cagaaacctttggtgaagggaacactgagaaagtcaacatcattctgtctggatactcttctctgatcttggaaatgagcaaggtacccattcctgatcc 40917199  T
Q  591 agttccacctcccaatgaatgacacacttgaaatcctgt 629  Q
    |||||||||||| |  |||||||| | |||||| |||||    
T  40917200 agttccacctccaagcgaatgacaaatttgaaaacctgt 40917238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 384 - 627
Target Start/End: Complemental strand, 45319852 - 45319609
Alignment:
Q  384 gaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctccaca 483  Q
    |||||| || ||||||||||| ||||| || |  ||||| || ||||| ||||| || || |  || || |||||||| ||||||||||||||||| |||    
T  45319852 gaagcagatgtcatagagtgcttcattatcaaggaccatacactcatcggcattctccaccaattggtgaacagaaagtgttgcattgtaaggctcaaca 45319753  T
Q  484 actgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccattc 583  Q
    ||||| ||||| ||||| || || ||||| ||||| || || | |||||| ||||| || || ||||| || ||||| ||||| || || ||||||||||    
T  45319752 actgtgtctgacacctttggagatggaaagacagagaaagtgagcatcattcgatcagggtattcttctctgatctttgaaatgagtagagttcccattc 45319653  T
Q  584 cagaaccagttccacctcccaatgaatgacacacttgaaatcct 627  Q
    ||||||| ||||| |||||||| || || |||||||||||||||    
T  45319652 cagaacccgttcctcctcccaaggagtggcacacttgaaatcct 45319609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 691 - 728
Target Start/End: Complemental strand, 1639532 - 1639495
Alignment:
Q  691 attacattgaattatatcattttctcaaagtattatta 728  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  1639532 attacattgaattatgtcattttctcaaaatattatta 1639495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 719
Target Start/End: Complemental strand, 27733890 - 27733861
Alignment:
Q  690 gattacattgaattatatcattttctcaaa 719  Q
    ||||||||||||||||||||||||||||||    
T  27733890 gattacattgaattatatcattttctcaaa 27733861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 691 - 728
Target Start/End: Original strand, 34201063 - 34201100
Alignment:
Q  691 attacattgaattatatcattttctcaaagtattatta 728  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  34201063 attacattgaattatgtcattttctcaaattattatta 34201100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 382 - 599
Target Start/End: Original strand, 45453136 - 45453353
Alignment:
Q  382 cggaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctcca 481  Q
    |||||||||||||||||||| || ||||| |||| ||||||||||||||| ||||| |||||||| || || ||||| || || ||||||||||| || |    
T  45453136 cggaagcaaatatcatagagagcttcattatccagaaccatgcattcatcagcattctcaacaagttggtggacagagagtgtagcattgtaaggttcaa 45453235  T
Q  482 caactgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccat 581  Q
    |||| || || || |||||||| || || |||||||| || || | |||||| ||||| || || || ||||| ||||| ||||| | ||||||||||||    
T  45453236 caacagtgtcagataccttaggagatgggaacacagagaaagtaagcatcattcgatcagggtattcctccctgatcttagaaatcaaaagtgttcccat 45453335  T
Q  582 tccagaaccagttccacc 599  Q
    |||||||||||| |||||    
T  45453336 tccagaaccagtaccacc 45453353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 690 - 727
Target Start/End: Complemental strand, 3921710 - 3921673
Alignment:
Q  690 gattacattgaattatatcattttctcaaagtattatt 727  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  3921710 gattacattgaattatgtcattttctcaaattattatt 3921673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 4e-34; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 433 - 623
Target Start/End: Complemental strand, 34840252 - 34840062
Alignment:
Q  433 gcattttcaacaagctgatgcacagaaagggttgcattgtaaggctccacaactgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatca 532  Q
    ||||| ||||| | |||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||||||||||    
T  34840252 gcattctcaaccaactgatgaacagaaagagtagcattataaggctcaacaacagtatcagaaaccttcggagaaggaaacaccgaaaacgtcaacatca 34840153  T
Q  533 tacgatccggatactcttccctaatcttcgaaataagaagtgttcccattccagaaccagttccacctcccaatgaatgacacacttgaaa 623  Q
    | | ||| ||||| || || |||||||||||||| |  |  |||||||||||||| || ||||| |||||||| ||||||||||| |||||    
T  34840152 tcctatcaggatattcctctctaatcttcgaaatcaacaaagttcccattccagatcccgttcctcctcccaacgaatgacacacctgaaa 34840062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 719
Target Start/End: Original strand, 35917390 - 35917425
Alignment:
Q  684 aaatgagattacattgaattatatcattttctcaaa 719  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35917390 aaatgtgattacattgaattatatcattttctcaaa 35917425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 690 - 724
Target Start/End: Original strand, 30516373 - 30516407
Alignment:
Q  690 gattacattgaattatatcattttctcaaagtatt 724  Q
    |||||||||||||||||||||||||||||| ||||    
T  30516373 gattacattgaattatatcattttctcaaattatt 30516407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 384 - 590
Target Start/End: Original strand, 53146696 - 53146902
Alignment:
Q  384 gaagcaaatatcatagagtgcctcattgtccaaaaccatgcattcatctgcattttcaacaagctgatgcacagaaagggttgcattgtaaggctccaca 483  Q
    ||||||||| ||||| ||||| |||||||| | |||||| || |||||||||||||| || || || || ||||| |  || |||||||| ||||| |||    
T  53146696 gaagcaaatgtcataaagtgcttcattgtcaagaaccatacactcatctgcattttctaccagttggtggacagataatgtggcattgtatggctcaaca 53146795  T
Q  484 actgtatctgaaaccttaggtgaaggaaacacagaaaacgtcaacatcatacgatccggatactcttccctaatcttcgaaataagaagtgttcccattc 583  Q
    ||||| || || ||||| || || || || ||||| || || | |||||| |  || ||||| || ||||||||||| || || |  ||||||||||| |    
T  53146796 actgtgtcagatacctttggagatgggaaaacagagaaagtaagcatcattctgtctggatattcctccctaatctttgatatcaatagtgttcccatgc 53146895  T
Q  584 cagaacc 590  Q
    |||||||    
T  53146896 cagaacc 53146902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 690 - 726
Target Start/End: Original strand, 40150587 - 40150623
Alignment:
Q  690 gattacattgaattatatcattttctcaaagtattat 726  Q
    |||||||||||||||||||||||||||||| ||||||    
T  40150587 gattacattgaattatatcattttctcaaattattat 40150623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 691 - 726
Target Start/End: Complemental strand, 102947 - 102912
Alignment:
Q  691 attacattgaattatatcattttctcaaagtattat 726  Q
    ||||||||||||||||||||||||||||| ||||||    
T  102947 attacattgaattatatcattttctcaaattattat 102912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 691 - 726
Target Start/End: Complemental strand, 6299554 - 6299519
Alignment:
Q  691 attacattgaattatatcattttctcaaagtattat 726  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6299554 attacattgaattatatcattttctcaaattattat 6299519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 691 - 726
Target Start/End: Complemental strand, 6306364 - 6306329
Alignment:
Q  691 attacattgaattatatcattttctcaaagtattat 726  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6306364 attacattgaattatatcattttctcaaattattat 6306329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 728
Target Start/End: Complemental strand, 33135870 - 33135837
Alignment:
Q  695 cattgaattatatcattttctcaaagtattatta 728  Q
    ||||||||||||||||||||||||| ||||||||    
T  33135870 cattgaattatatcattttctcaaattattatta 33135837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University