View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11636_low_22 (Length: 256)
Name: NF11636_low_22
Description: NF11636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11636_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 8354943 - 8355205
Alignment:
| Q |
1 |
ctatcctatccttgaat--tactcggattgctcctttaataatggagtacttggtcattcattttaaaaactatcggttttggtccctttcttatagta- |
97 |
Q |
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| T |
8354943 |
ctatcctatccttgaatattactcggattggtcctttaataatggagtacttggtcattcattttaaaaactatcggttttggtccctttcttatagtat |
8355042 |
T |
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| Q |
98 |
-----------------ctcaaaaaggatgattttatatgttttataagtcatacaaatataaatttcaggggtttgcattccaagttggtttacaaatt |
180 |
Q |
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| T |
8355043 |
ttttatttttttttaaactcaaaaaggatgattttatatgttttataagtcatataaatataaatttcaggggtttgcattccaagttggtttacaaatt |
8355142 |
T |
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| Q |
181 |
gaaagtaaattaaaacttaaatttagaatcaagacgaacaattaagattgtctgaatccctct |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8355143 |
gaaagtaaattaaaacttaaatttagaatcaagacgaacaattaagattgtctgaatccctct |
8355205 |
T |
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