View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11639_high_12 (Length: 227)

Name: NF11639_high_12
Description: NF11639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11639_high_12
NF11639_high_12
[»] chr3 (64 HSPs)
chr3 (44-211)||(33932402-33932568)
chr3 (44-211)||(48545102-48545270)
chr3 (44-211)||(7040874-7041041)
chr3 (44-211)||(54510302-54510469)
chr3 (44-211)||(29500325-29500493)
chr3 (44-211)||(30268998-30269166)
chr3 (44-211)||(45599181-45599349)
chr3 (44-211)||(36592131-36592298)
chr3 (44-211)||(22346994-22347162)
chr3 (44-210)||(39721252-39721418)
chr3 (44-211)||(4018909-4019077)
chr3 (44-211)||(52461020-52461188)
chr3 (44-211)||(54741796-54741966)
chr3 (46-211)||(2909425-2909592)
chr3 (44-211)||(7265048-7265215)
chr3 (44-211)||(14587301-14587469)
chr3 (44-201)||(53022669-53022826)
chr3 (44-211)||(52674776-52674942)
chr3 (44-211)||(19536700-19536866)
chr3 (44-211)||(26881614-26881780)
chr3 (44-201)||(50739157-50739313)
chr3 (44-201)||(50773542-50773698)
chr3 (47-211)||(29450652-29450817)
chr3 (44-201)||(48961122-48961276)
chr3 (44-201)||(36987654-36987810)
chr3 (44-201)||(37013093-37013249)
chr3 (44-211)||(46757552-46757720)
chr3 (129-210)||(12101464-12101545)
chr3 (44-209)||(20849317-20849484)
chr3 (46-201)||(47719487-47719641)
chr3 (129-211)||(13450265-13450347)
chr3 (44-211)||(42187665-42187832)
chr3 (44-210)||(38361743-38361910)
chr3 (129-211)||(43316516-43316598)
chr3 (44-200)||(15496385-15496541)
chr3 (129-209)||(35690212-35690293)
chr3 (44-201)||(41990680-41990836)
chr3 (45-201)||(20996251-20996406)
chr3 (49-211)||(37413561-37413724)
chr3 (71-201)||(44762666-44762795)
chr3 (44-189)||(33899842-33899986)
chr3 (129-201)||(46090118-46090190)
chr3 (129-201)||(54113415-54113487)
chr3 (129-211)||(13337092-13337173)
chr3 (129-211)||(50933197-50933279)
chr3 (129-210)||(35906684-35906766)
chr3 (129-210)||(54203746-54203828)
chr3 (129-201)||(46850711-46850783)
chr3 (135-210)||(12996818-12996893)
chr3 (129-201)||(54195682-54195754)
chr3 (44-163)||(35529773-35529890)
chr3 (150-211)||(875826-875884)
chr3 (129-191)||(46088720-46088782)
chr3 (161-201)||(34433763-34433803)
chr3 (153-211)||(42617767-42617825)
chr3 (140-185)||(10617639-10617684)
chr3 (140-201)||(54835729-54835790)
chr3 (44-96)||(54113526-54113577)
chr3 (44-87)||(875883-875926)
chr3 (129-180)||(8238921-8238972)
chr3 (158-201)||(44075414-44075456)
chr3 (45-87)||(54203667-54203709)
chr3 (165-201)||(916278-916313)
chr3 (129-201)||(32754151-32754222)
[»] chr7 (56 HSPs)
chr7 (46-211)||(18956216-18956380)
chr7 (44-211)||(38045648-38045815)
chr7 (44-209)||(37669184-37669349)
chr7 (44-211)||(40239811-40239979)
chr7 (44-207)||(12907906-12908069)
chr7 (44-211)||(29448631-29448799)
chr7 (55-211)||(27031153-27031311)
chr7 (45-211)||(32960712-32960878)
chr7 (44-211)||(10999103-10999271)
chr7 (44-209)||(43156185-43156349)
chr7 (44-211)||(40789170-40789337)
chr7 (44-211)||(41426954-41427120)
chr7 (55-211)||(23639341-23639497)
chr7 (44-211)||(1448091-1448258)
chr7 (44-211)||(4399981-4400148)
chr7 (44-211)||(17278145-17278314)
chr7 (44-201)||(41343235-41343392)
chr7 (131-211)||(45620640-45620720)
chr7 (45-211)||(4407957-4408118)
chr7 (44-210)||(4406541-4406709)
chr7 (44-202)||(44651793-44651955)
chr7 (50-210)||(47840722-47840881)
chr7 (47-201)||(5526108-5526259)
chr7 (46-201)||(4404295-4404447)
chr7 (49-201)||(4492356-4492506)
chr7 (46-205)||(23154632-23154789)
chr7 (140-209)||(4615384-4615454)
chr7 (46-201)||(5483406-5483562)
chr7 (129-209)||(6607088-6607169)
chr7 (129-210)||(21134356-21134436)
chr7 (129-201)||(20482280-20482352)
chr7 (129-201)||(36769226-36769298)
chr7 (47-210)||(20135005-20135158)
chr7 (44-185)||(36765592-36765734)
chr7 (44-185)||(40035944-40036083)
chr7 (44-120)||(43111100-43111175)
chr7 (140-198)||(3840021-3840079)
chr7 (44-152)||(4616111-4616218)
chr7 (160-209)||(16933500-16933550)
chr7 (160-209)||(16938883-16938933)
chr7 (47-120)||(37143512-37143584)
chr7 (160-201)||(43111035-43111076)
chr7 (158-201)||(20762915-20762957)
chr7 (140-190)||(17816601-17816650)
chr7 (140-190)||(19050351-19050400)
chr7 (158-201)||(19036360-19036402)
chr7 (158-201)||(20718234-20718276)
chr7 (158-201)||(29488481-29488523)
chr7 (158-201)||(33232655-33232697)
chr7 (158-201)||(34284797-34284839)
chr7 (148-187)||(35910287-35910326)
chr7 (181-211)||(19758160-19758190)
chr7 (44-120)||(16933401-16933478)
chr7 (44-120)||(16938784-16938861)
chr7 (45-78)||(21134127-21134160)
chr7 (129-205)||(42828881-42828956)
[»] chr6 (31 HSPs)
chr6 (44-211)||(18593525-18593692)
chr6 (44-211)||(32244369-32244535)
chr6 (44-211)||(3850217-3850384)
chr6 (44-211)||(20791538-20791705)
chr6 (44-211)||(559719-559886)
chr6 (44-201)||(34247671-34247827)
chr6 (45-211)||(28472213-28472380)
chr6 (47-211)||(33945738-33945905)
chr6 (44-210)||(7541098-7541263)
chr6 (44-211)||(24046478-24046642)
chr6 (45-210)||(6018490-6018656)
chr6 (44-201)||(17505488-17505645)
chr6 (44-185)||(19988908-19989048)
chr6 (45-210)||(29859401-29859569)
chr6 (55-201)||(29043209-29043354)
chr6 (44-201)||(34206927-34207075)
chr6 (51-201)||(6833553-6833703)
chr6 (47-201)||(24162794-24162948)
chr6 (49-201)||(5414482-5414634)
chr6 (129-201)||(173062-173134)
chr6 (131-201)||(10945711-10945781)
chr6 (46-162)||(10943067-10943182)
chr6 (44-120)||(172967-173042)
chr6 (129-202)||(3053915-3053987)
chr6 (129-196)||(8866970-8867037)
chr6 (134-201)||(18314008-18314074)
chr6 (148-201)||(33976004-33976056)
chr6 (44-120)||(29977709-29977784)
chr6 (158-201)||(247420-247462)
chr6 (158-201)||(12582487-12582529)
chr6 (166-200)||(29976317-29976351)
[»] chr4 (68 HSPs)
chr4 (44-211)||(55991810-55991979)
chr4 (44-211)||(1166630-1166796)
chr4 (44-211)||(1169112-1169278)
chr4 (44-211)||(7400123-7400291)
chr4 (44-211)||(53274619-53274787)
chr4 (44-211)||(7365787-7365954)
chr4 (44-211)||(55188161-55188328)
chr4 (44-211)||(13890909-13891078)
chr4 (44-211)||(27288389-27288556)
chr4 (44-211)||(11200824-11200992)
chr4 (44-211)||(26111369-26111539)
chr4 (44-211)||(36189974-36190141)
chr4 (47-211)||(11966923-11967086)
chr4 (44-211)||(40950936-40951103)
chr4 (44-211)||(55208400-55208570)
chr4 (47-211)||(34264550-34264714)
chr4 (44-211)||(17624651-17624821)
chr4 (44-211)||(32206509-32206678)
chr4 (44-210)||(17976438-17976604)
chr4 (46-210)||(23628826-23628990)
chr4 (44-210)||(8847929-8848097)
chr4 (129-211)||(10137883-10137965)
chr4 (44-210)||(28116749-28116924)
chr4 (129-211)||(6940178-6940260)
chr4 (47-201)||(22556965-22557120)
chr4 (45-209)||(24303720-24303884)
chr4 (44-201)||(39651736-39651889)
chr4 (46-210)||(18138327-18138495)
chr4 (45-201)||(28361410-28361565)
chr4 (44-202)||(8151202-8151359)
chr4 (55-201)||(43117519-43117664)
chr4 (45-210)||(37873560-37873728)
chr4 (46-209)||(40665513-40665675)
chr4 (91-201)||(11180909-11181018)
chr4 (129-211)||(29099625-29099707)
chr4 (129-201)||(41144305-41144377)
chr4 (44-201)||(46045716-46045867)
chr4 (44-210)||(20681186-20681348)
chr4 (46-181)||(40952041-40952175)
chr4 (129-210)||(49125536-49125618)
chr4 (129-201)||(26097651-26097723)
chr4 (129-201)||(40849729-40849801)
chr4 (129-211)||(32200716-32200799)
chr4 (44-201)||(346520-346679)
chr4 (59-201)||(8654246-8654386)
chr4 (65-187)||(51153499-51153622)
chr4 (160-207)||(34663865-34663912)
chr4 (45-120)||(34664904-34664978)
chr4 (44-209)||(24631018-24631181)
chr4 (129-191)||(32139419-32139481)
chr4 (129-210)||(51187608-51187690)
chr4 (44-87)||(10581901-10581944)
chr4 (160-209)||(45472468-45472518)
chr4 (129-197)||(30071346-30071414)
chr4 (44-120)||(34663936-34664012)
chr4 (158-201)||(26926968-26927010)
chr4 (176-211)||(45019226-45019261)
chr4 (160-210)||(52620629-52620680)
chr4 (139-189)||(25881932-25881982)
chr4 (140-190)||(29346238-29346287)
chr4 (140-190)||(35832002-35832051)
chr4 (44-120)||(52620704-52620779)
chr4 (158-201)||(10262027-10262069)
chr4 (158-201)||(21562386-21562428)
chr4 (158-201)||(24080098-24080140)
chr4 (158-201)||(43329907-43329949)
chr4 (44-87)||(45019181-45019224)
chr4 (44-116)||(41106027-41106098)
[»] chr1 (50 HSPs)
chr1 (44-211)||(33373735-33373902)
chr1 (44-211)||(11583149-11583314)
chr1 (44-211)||(39326959-39327125)
chr1 (44-211)||(7833538-7833705)
chr1 (44-211)||(17585508-17585675)
chr1 (47-209)||(11754146-11754308)
chr1 (44-211)||(33818010-33818176)
chr1 (44-211)||(33877478-33877644)
chr1 (44-211)||(46588007-46588173)
chr1 (44-211)||(33895131-33895299)
chr1 (44-211)||(41901614-41901782)
chr1 (45-209)||(38802300-38802464)
chr1 (44-211)||(9574854-9575021)
chr1 (44-211)||(25659724-25659892)
chr1 (44-211)||(43120693-43120861)
chr1 (44-211)||(3265109-3265276)
chr1 (44-211)||(33642603-33642770)
chr1 (47-211)||(45104173-45104337)
chr1 (44-211)||(47037045-47037213)
chr1 (44-207)||(14487239-14487402)
chr1 (45-211)||(36165435-36165603)
chr1 (44-211)||(40432113-40432285)
chr1 (44-211)||(33894008-33894169)
chr1 (44-187)||(39729120-39729262)
chr1 (44-211)||(17249027-17249195)
chr1 (49-201)||(43123042-43123193)
chr1 (47-201)||(43119032-43119186)
chr1 (129-211)||(33831925-33832007)
chr1 (44-201)||(24473465-24473623)
chr1 (46-211)||(36952630-36952796)
chr1 (44-211)||(39879056-39879223)
chr1 (44-210)||(31638331-31638496)
chr1 (46-201)||(34652277-34652431)
chr1 (46-188)||(16097358-16097502)
chr1 (47-172)||(31215782-31215907)
chr1 (47-172)||(31221537-31221662)
chr1 (44-201)||(34078285-34078440)
chr1 (129-210)||(46040486-46040568)
chr1 (46-187)||(17366271-17366411)
chr1 (129-211)||(1322525-1322608)
chr1 (44-200)||(49571205-49571357)
chr1 (129-210)||(18091268-18091348)
chr1 (47-209)||(33932911-33933072)
chr1 (44-210)||(23730210-23730376)
chr1 (86-201)||(7308288-7308404)
chr1 (46-156)||(45589664-45589773)
chr1 (129-196)||(11606467-11606534)
chr1 (44-97)||(33831845-33831897)
chr1 (134-191)||(49223163-49223219)
chr1 (46-118)||(44819821-44819891)
[»] chr8 (59 HSPs)
chr8 (44-209)||(17313456-17313621)
chr8 (44-211)||(17045924-17046092)
chr8 (44-211)||(39685414-39685581)
chr8 (44-211)||(43817879-43818046)
chr8 (44-211)||(7219370-7219537)
chr8 (44-211)||(14718858-14719025)
chr8 (44-211)||(27467703-27467872)
chr8 (44-211)||(34805780-34805949)
chr8 (44-211)||(41360981-41361148)
chr8 (44-211)||(16239083-16239250)
chr8 (44-211)||(36216492-36216658)
chr8 (44-210)||(44908488-44908649)
chr8 (44-209)||(169620-169786)
chr8 (44-211)||(11924758-11924926)
chr8 (44-211)||(16845019-16845186)
chr8 (44-210)||(36059192-36059358)
chr8 (44-209)||(44602854-44603017)
chr8 (47-209)||(6816024-6816189)
chr8 (44-210)||(38139303-38139471)
chr8 (44-201)||(11579194-11579350)
chr8 (44-210)||(37034816-37034984)
chr8 (44-208)||(39485942-39486108)
chr8 (129-211)||(2184410-2184492)
chr8 (46-191)||(12261387-12261532)
chr8 (47-211)||(26518714-26518878)
chr8 (44-201)||(38137634-38137791)
chr8 (44-197)||(39525458-39525610)
chr8 (44-188)||(41526324-41526467)
chr8 (49-201)||(45138971-45139122)
chr8 (51-210)||(34997523-34997681)
chr8 (44-186)||(39997991-39998134)
chr8 (55-210)||(1877506-1877659)
chr8 (129-201)||(38909288-38909360)
chr8 (44-210)||(44655059-44655224)
chr8 (129-209)||(2190647-2190728)
chr8 (46-191)||(42984002-42984142)
chr8 (129-201)||(42844281-42844352)
chr8 (44-185)||(14449524-14449667)
chr8 (159-202)||(1922389-1922432)
chr8 (129-200)||(15310398-15310470)
chr8 (129-200)||(15490767-15490839)
chr8 (142-189)||(9275854-9275901)
chr8 (129-184)||(27877985-27878040)
chr8 (129-184)||(28018166-28018221)
chr8 (130-196)||(34325869-34325935)
chr8 (129-184)||(27914929-27914984)
chr8 (129-184)||(27961348-27961403)
chr8 (158-201)||(30550984-30551026)
chr8 (158-201)||(44215733-44215775)
chr8 (46-183)||(39140716-39140852)
chr8 (158-201)||(20665621-20665663)
chr8 (129-184)||(27748853-27748908)
chr8 (148-199)||(39201524-39201574)
chr8 (160-210)||(33848722-33848772)
chr8 (55-120)||(33848634-33848698)
chr8 (47-120)||(35004340-35004412)
chr8 (150-211)||(35916579-35916640)
chr8 (131-191)||(40048678-40048739)
chr8 (165-201)||(1921795-1921831)
[»] chr5 (64 HSPs)
chr5 (44-211)||(2475189-2475356)
chr5 (45-211)||(24758972-24759138)
chr5 (44-211)||(24027775-24027942)
chr5 (44-211)||(3297740-3297907)
chr5 (44-211)||(16050689-16050856)
chr5 (45-211)||(32261632-32261797)
chr5 (44-211)||(5589382-5589549)
chr5 (44-209)||(31884580-31884745)
chr5 (44-211)||(31939749-31939917)
chr5 (44-209)||(665476-665642)
chr5 (46-193)||(25821231-25821377)
chr5 (44-211)||(4374769-4374939)
chr5 (44-211)||(26379204-26379374)
chr5 (47-210)||(42110679-42110843)
chr5 (46-211)||(27176393-27176559)
chr5 (46-211)||(42322866-42323031)
chr5 (44-211)||(29383642-29383810)
chr5 (44-210)||(29874584-29874750)
chr5 (129-211)||(6928360-6928442)
chr5 (45-210)||(2530075-2530242)
chr5 (51-210)||(19361641-19361799)
chr5 (44-209)||(789977-790142)
chr5 (45-201)||(28746235-28746390)
chr5 (44-210)||(10042782-10042954)
chr5 (45-210)||(40506719-40506884)
chr5 (45-197)||(42111726-42111877)
chr5 (45-210)||(3246819-3246985)
chr5 (47-205)||(36083790-36083948)
chr5 (46-210)||(788943-789108)
chr5 (44-207)||(15976476-15976640)
chr5 (44-211)||(36088567-36088736)
chr5 (44-197)||(43396524-43396680)
chr5 (46-210)||(42416790-42416955)
chr5 (129-210)||(39803853-39803934)
chr5 (129-201)||(40308340-40308412)
chr5 (44-201)||(37147067-37147223)
chr5 (44-201)||(8314829-8314987)
chr5 (47-201)||(7536645-7536800)
chr5 (135-210)||(31958390-31958465)
chr5 (46-209)||(30503448-30503613)
chr5 (46-209)||(30543791-30543956)
chr5 (44-181)||(14205433-14205570)
chr5 (129-191)||(16166292-16166354)
chr5 (134-211)||(28990943-28991021)
chr5 (129-201)||(19270905-19270977)
chr5 (137-200)||(1060706-1060768)
chr5 (129-210)||(29382576-29382659)
chr5 (58-184)||(2001506-2001631)
chr5 (129-199)||(3213231-3213300)
chr5 (44-207)||(39782952-39783116)
chr5 (44-170)||(30503673-30503800)
chr5 (44-170)||(30544016-30544143)
chr5 (129-190)||(35380505-35380566)
chr5 (129-196)||(14720185-14720252)
chr5 (141-196)||(28869358-28869413)
chr5 (140-191)||(43354523-43354573)
chr5 (159-205)||(2463637-2463683)
chr5 (134-184)||(15875756-15875806)
chr5 (158-201)||(37461872-37461914)
chr5 (158-211)||(28887174-28887228)
chr5 (44-77)||(14720307-14720340)
chr5 (45-78)||(31958299-31958332)
chr5 (129-201)||(18041185-18041256)
chr5 (140-180)||(20259072-20259112)
[»] scaffold0166 (1 HSPs)
scaffold0166 (45-211)||(1466-1632)
[»] chr2 (38 HSPs)
chr2 (44-211)||(1835678-1835844)
chr2 (44-211)||(970946-971114)
chr2 (44-211)||(8878112-8878280)
chr2 (44-210)||(7274664-7274831)
chr2 (44-211)||(36085861-36086029)
chr2 (49-209)||(24926005-24926165)
chr2 (44-211)||(8683652-8683819)
chr2 (44-211)||(31972275-31972442)
chr2 (44-207)||(18166749-18166911)
chr2 (44-211)||(5166259-5166427)
chr2 (44-211)||(3324178-3324346)
chr2 (47-209)||(4631203-4631369)
chr2 (44-201)||(3079720-3079876)
chr2 (44-201)||(34912654-34912810)
chr2 (44-210)||(3243209-3243377)
chr2 (129-211)||(7233016-7233098)
chr2 (44-201)||(40202218-40202374)
chr2 (44-201)||(10120612-10120770)
chr2 (49-209)||(36078481-36078637)
chr2 (47-201)||(1117981-1118136)
chr2 (44-201)||(35423789-35423939)
chr2 (48-210)||(38879129-38879291)
chr2 (44-210)||(668206-668375)
chr2 (44-201)||(41452818-41452974)
chr2 (44-211)||(17032728-17032895)
chr2 (44-175)||(20313162-20313294)
chr2 (51-201)||(45474725-45474875)
chr2 (49-172)||(38959564-38959687)
chr2 (134-209)||(9799330-9799405)
chr2 (44-210)||(2180011-2180178)
chr2 (134-191)||(38709708-38709765)
chr2 (158-211)||(17051167-17051220)
chr2 (44-120)||(17051064-17051139)
chr2 (44-120)||(13549490-13549565)
chr2 (158-201)||(3708454-3708496)
chr2 (158-201)||(11868920-11868962)
chr2 (158-201)||(35360313-35360355)
chr2 (46-120)||(9799239-9799312)
[»] scaffold0481 (2 HSPs)
scaffold0481 (47-209)||(4431-4592)
scaffold0481 (44-209)||(7442-7610)
[»] scaffold0197 (1 HSPs)
scaffold0197 (44-211)||(25700-25869)
[»] scaffold0178 (1 HSPs)
scaffold0178 (44-201)||(7204-7364)
[»] scaffold0244 (1 HSPs)
scaffold0244 (47-210)||(7493-7656)
[»] scaffold0024 (2 HSPs)
scaffold0024 (44-209)||(90374-90542)
scaffold0024 (44-202)||(110442-110600)
[»] scaffold0198 (1 HSPs)
scaffold0198 (44-201)||(15174-15333)
[»] scaffold0768 (1 HSPs)
scaffold0768 (51-201)||(6225-6375)
[»] scaffold0027 (1 HSPs)
scaffold0027 (44-201)||(137944-138101)
[»] scaffold0020 (1 HSPs)
scaffold0020 (45-211)||(132648-132817)
[»] scaffold0078 (1 HSPs)
scaffold0078 (129-189)||(5732-5793)
[»] scaffold0003 (1 HSPs)
scaffold0003 (44-184)||(229101-229241)
[»] scaffold0318 (1 HSPs)
scaffold0318 (44-184)||(1072-1211)
[»] scaffold1793 (1 HSPs)
scaffold1793 (44-114)||(182-251)
[»] scaffold0010 (2 HSPs)
scaffold0010 (129-205)||(50244-50319)
scaffold0010 (129-205)||(57777-57852)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 33932402 - 33932568
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||||||||| ||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||        |||||||||||||||    
T  33932402 cggtctaaaaactactctaaaacaaagttaaaataaagctcttt-aagaaaaagactaaagctgtttggtttctttattttttttagttctaaagttatt 33932500  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33932501 tttgagttaaaagctgtttgacaaaatattgtataaaactttgaatttattattttttggtggtgtct 33932568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 48545270 - 48545102
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  48545270 cggtctaaaagctactttaaaacaaaattaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 48545172  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48545171 tttttgagttaaaagctgtttgacaaaatatcgtacaaaactttgaatttattattttttggtggtgtct 48545102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 7041041 - 7040874
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||         ||||||||||||||    
T  7041041 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttat 7040943  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7040942 ttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 7040874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 54510302 - 54510469
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| |||||||||||||||          ||||||||||||||    
T  54510302 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttttttttttttagttctaaagttat 54510400  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  54510401 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 54510469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 29500493 - 29500325
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  29500493 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 29500395  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29500394 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 29500325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 30268998 - 30269166
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  30268998 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 30269096  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30269097 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 30269166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 45599181 - 45599349
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||          |||||||||||||    
T  45599181 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggccaaagctgtttggtttctttattttttttttagttctaaagtta 45599279  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45599280 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 45599349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 36592131 - 36592298
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  36592131 cggtctaaaagctactttaaaacaaagttaaaataaaactcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 36592229  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36592230 ttttgagttaaaaactgtttgtcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 36592298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 22346994 - 22347162
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  22346994 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 22347092  T
Q  143 ttttgagttaaaagctgtttgacaaaa-tattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22347093 ttttgagttaaaagctgtttagcaaaaatattgtacaaaactttgaatttattattttttggtggtgtct 22347162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 39721418 - 39721252
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||||||||||||||||||| |||||||| |||||||| | ||||||  ||||| ||||||||||||||||        |||||||||||||||    
T  39721418 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaaaa-ctaaagctgtttggtttctttattttttttagttctaaagttatt 39721320  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  39721319 tttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 39721252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 4019077 - 4018909
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||| ||||||||          |||||||||||||    
T  4019077 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttgatttctttattttttttttagttctaaagtta 4018979  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  4018978 tttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtct 4018909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 52461188 - 52461020
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||| ||||||||          |||||||||||||    
T  52461188 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaagactaaaactgtttgatttctttattttttttttagttctaaagtta 52461090  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  52461089 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttataattttttcgtggtgtct 52461020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 54741966 - 54741796
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||            |||||||||||    
T  54741966 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttattttttttttttagttctaaagt 54741868  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  54741867 tatttttgagttaaaagctgtttggcaaaatattgtacaaaattttaaatttattattttttggtggtgtct 54741796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 2909592 - 2909425
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttatt 143  Q
    |||||||| ||||||||||||||| |||||||| |||||||  | |||||||  |||| ||||||||||||||||          | |||||||||||||    
T  2909592 gtctaaaagctactttaaaacaaagttaaaataaagctcttcaaggaaaaaggttaaagctgtttggtttctttatttgttttttaattctaaagttatt 2909493  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2909492 tttgagttaaaagctgtttgacaaaatattatacaaaactttgaatttattattttttggtggtgtct 2909425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 7265215 - 7265048
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||  |||||  |||||||||||||||         ||||||||||||||    
T  7265215 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaagctaaagttgtttggtttctttatttttttttagttctaaagttat 7265117  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  7265116 ttttgagttaaaagcagtttgacaaattattgtacaaaactttgaatttattatttttttgtggtgtct 7265048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 14587301 - 14587469
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| || |||| ||||||||          |||||||||||||    
T  14587301 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctatttgatttctttattttttttttagttctaaagtta 14587399  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14587400 tttttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 14587469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 53022826 - 53022669
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||         ||||||||||||||    
T  53022826 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggccaaagctgtttggtttctttatttttttttagttctaaagttat 53022728  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  53022727 ttttgagttaaaagctgtttggcgaaatattgtacaaaactttgaatttattatttttt 53022669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 52674942 - 52674776
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |  ||||||| |||| ||||||||||||||||         ||| ||||||||||    
T  52674942 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaagctgtttggtttctttatttttttgtagtactaaagttat 52674844  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  52674843 ttttgagttaaaa-ctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 52674776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 19536866 - 19536700
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||| ||||||||||| |||||||| || ||||| ||||||||| ||||| ||||||| ||||||||        |||||||||||||||    
T  19536866 cggtctaaaagctaatttaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagctgtttgatttctttattttttttagttctaaagttatt 19536768  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||| ||||||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19536767 tttgaattaaaagttgtttggcaaaatattgtataaaactttgaatttattattttttgctggtgtct 19536700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 26881780 - 26881614
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |  ||||||| ||||  |||||||||| ||||        |||||||||||||||    
T  26881780 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaagttgtttggtttatttattttttttagttctaaagttatt 26881682  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  26881681 tttgagttaaaaactgtttggcaaaatattttacaaaactttgaatttattatttttttgtggtgtct 26881614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 50739313 - 50739157
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| ||||||||  ||||| ||||||||||||||||        |||||||||||||||    
T  50739313 cggtctaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaagctaaagctgtttggtttctttattttttttagttctaaagttatt 50739215  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  50739214 tttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttattatttttt 50739157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 50773542 - 50773698
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| ||||||||  ||||| ||||||||||||||||        |||||||||||||||    
T  50773542 cggtctaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaagctaaagctgtttggtttctttattttttttagttctaaagttatt 50773640  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  50773641 tttaagttaaaaggtgtttggcaaaatattatacaaaactttgaatttattatttttt 50773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 29450817 - 29450652
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttattt 144  Q
    ||||||| ||||||||||||||| |||||||| || ||||| |||||||||  |||| ||||||||||||||||          | ||||||||||||||    
T  29450817 tctaaaagctactttaaaacaaagttaaaataaagttcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttaattctaaagttattt 29450719  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29450718 ttgggttaaaagctgtttagcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 29450652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 48961276 - 48961122
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||| ||||||||          |||||||||||||    
T  48961276 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttgatttctttattattttt--ttctaaagttatt 48961180  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  48961179 tttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttattatttttt 48961122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 36987654 - 36987810
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |  ||||||| |||| ||||||||||||||||        | |||||||||||||    
T  36987654 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaagctgtttggtttctttattttttttaattctaaagttatt 36987752  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  36987753 tttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 36987810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 37013093 - 37013249
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |  ||||||| |||| ||||||||||||||||        | |||||||||||||    
T  37013093 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaagctgtttggtttctttattttttttaattctaaagttatt 37013191  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  37013192 tttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 37013249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 46757720 - 46757552
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||| ||||| ||||||||||||||| |||||||| |||| ||||||||||||| ||||| |||||| |||| ||||           ||||||||||||    
T  46757720 cggtttaaaagctactttaaaacaaagttaaaataaagct-ttttaagaaaaagactaaagctgtttagtttttttattttttttttcagttctaaagtt 46757622  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  46757621 atttttgagttaaaagctgtttggcaaaatattgta-taaactttgaatttattattttttggtggtgtct 46757552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 12101464 - 12101545
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12101464 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 12101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 20849317 - 20849484
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||||||||  |||||||||| ||| |||||||| ||  |||| || ||||||  |||| ||||||||||||||||          |||||||||||||    
T  20849317 cggtctaaaagttactttaaaaaaaagttaaaataaagtcctttaaaaaaaaagagtaaagctgtttggtttctttatttattttttagttctaaagtta 20849416  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  20849417 tttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgt 20849484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 201
Target Start/End: Complemental strand, 47719641 - 47719487
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| |||||||| | |||||||| |||| || |||| ||||||||        | |||||||||||||||    
T  47719641 gtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctatttgatttctttattttttttaattctaaagttatttt 47719543  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    | ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  47719542 taagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 47719487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 13450347 - 13450265
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13450347 agttctaaaattatttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 13450265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 42187665 - 42187832
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||| ||||| ||||||||||||||| || ||||| ||| |||| || |||||| ||||| ||||||||||||||||        |||| ||||||||||    
T  42187665 cggtttaaaagctactttaaaacaaagtttaaataaagccctttaaa-aaaaaggctaaagctgtttggtttctttattttttttagttataaagttatt 42187763  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    ||| ||||||||| |||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  42187764 tttaagttaaaagttgtttggcaaaatattgtacaaaacttaaaatttattatttttttggtggtgtct 42187832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 38361910 - 38361743
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |  |  |||| | ||||   |||| ||||||||||||||||        |||||||||||||||    
T  38361910 cggtctaaaagctactttaaaacaaagttaaaataaaatttctttagggaaaaaggtaaagctgtttggtttctttattttttttagttctaaagttatt 38361811  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||| ||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  38361810 tttaagttaaaagttgtttggcagaatattgtacaaaactttgaatttattatttttttggtggtgtc 38361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 43316516 - 43316598
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  43316516 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtct 43316598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 15496385 - 15496541
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta-nnnnnnnnagttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| ||||| |||||||||||  ||||| ||||||||||||||||         ||||||||||||||    
T  15496385 cggtctaaaagctactttaaaacaaagttaaaataaagctc-tttaagaaaaaaactaaagctgtttggtttctttatttttttttagttctaaagttat 15496483  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttt 200  Q
    |||| || || ||| |||||| ||||||||||||||||||||||||||| || |||||    
T  15496484 ttttaagctataagttgtttggcaaaatattgtacaaaactttgaatttttttttttt 15496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 35690212 - 35690293
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35690212 agttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 35690293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 41990680 - 41990836
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| || ||| | |  ||||||| ||||  |||||||||||||||        |||||||||||||||    
T  41990680 cggtctaaaagctactttaaaacaaagttaaaataaagttctataagaaaaaagt-taaagttgtttggtttctttattttttctagttctaaagttatt 41990778  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||    
T  41990779 tttaagttaaaagttgtttggcaaaatattgtaccaaactttaaatttattatttttt 41990836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 45 - 201
Target Start/End: Original strand, 20996251 - 20996406
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    |||||||||| |||||||||| ||| |||||||| ||| |||| |||||||| | |||| ||||||| ||||||||        ||||||||||||||||    
T  20996251 ggtctaaaaattactttaaaataaagttaaaataaagcactttaaagaaaaaat-taaagctgtttgatttctttattttttttagttctaaagttattt 20996349  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || | ||||||| |||||| ||||||||||||||||| ||||||||| || ||||||    
T  20996350 ttaaattaaaagttgtttgtcaaaatattgtacaaaattttgaattttttttttttt 20996406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 37413724 - 37413561
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttttg 147  Q
    ||||| ||||||||||||||| |||||||| || || |||||||||||  ||||| ||||||||||||| ||         |||| |||||||||||||     
T  37413724 taaaagctactttaaaacaaagttaaaataaag-tcctttaagaaaaaagctaaagctgtttggtttctatattttcttttagttataaagttattttta 37413626  T
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttt-ttggtggtgtct 211  Q
    ||||| ||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37413625 agttacaagttgtttggcaaaatattgtacaaaattttgaatttattattttcttggtggtgtct 37413561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 44762666 - 44762795
Alignment:
Q  71 ttaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaaagctgtttgacaaaat 170  Q
    |||||||| || ||||| | |||||||| |||| ||||||||||||||||        | |||||||||||||||| ||||||||| |||||| ||||||    
T  44762666 ttaaaataaagttctttaaggaaaaagt-taaagctgtttggtttctttattttttttaattctaaagttatttttaagttaaaagttgtttggcaaaat 44762764  T
Q  171 attgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||||||||||| ||||    
T  44762765 attgtacaaaactttgaatttattatatttt 44762795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 33899986 - 33899842
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    ||||||||||  |||||||||||||| |||||||| || | ||||||||||||  ||||| ||||||||||||||||        |||| ||||||||||    
T  33899986 cggtctaaaagttactttaaaacaaagttaaaataaagtt-ttttaagaaaaaagctaaaactgtttggtttctttattttttttagttataaagttatt 33899888  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaat 189  Q
    ||| ||||||||| |||||| ||||||||| ||| |||||||||||    
T  33899887 tttaagttaaaagttgtttggcaaaatattttacgaaactttgaat 33899842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 46090118 - 46090190
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  46090118 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 46090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 54113487 - 54113415
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  54113487 agttataaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttattatttttt 54113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 13337173 - 13337092
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||| ||||||| | |||||| |||||||| |||||||||||||||||||||||||||| |||||||||    
T  13337173 agttctaaagttatttttaagttaaa-gttgtttggcaaaatatcgtacaaaactttgaatttattatttttttgtggtgtct 13337092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 50933279 - 50933197
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| || ||||||    
T  50933279 agttataaagttatttttaagttaaaagctgtttaacaaaatattgtacaaaaatttaaatttattatttttttgttgtgtct 50933197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 35906684 - 35906766
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    ||||||||| |||||||| | ||||||| || |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  35906684 agttctaaaattatttttaaattaaaagttggttgacaaaatattgtacaaaactttgaattgattatttttttggtggtgtc 35906766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 54203746 - 54203828
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    |||||||||||||||||| | ||||||| |||||| |||||||||||||||||| || ||||||||| |||||||||||||||    
T  54203746 agttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaaaacattaaatttattatttttttggtggtgtc 54203828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 46850711 - 46850783
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||| ||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  46850711 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtacaaacctttgaatttattatttttt 46850783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 12996818 - 12996893
Alignment:
Q  135 aaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    |||||||||||| ||||||||| ||||||  |||||||||||| ||||||||||||||||| |||||||||||||||    
T  12996818 aaagttatttttaagttaaaagttgtttggaaaaatattgtac-aaactttgaatttattacttttttggtggtgtc 12996893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 54195682 - 54195754
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| || |||||||| ||||||||  | |||||||||||||||||||||| |||||||||||||||||||    
T  54195682 agttctgaaattatttttaagttaaaaattatttgacaaaatattgtacaaaattttgaatttattatttttt 54195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 35529773 - 35529890
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| ||| | ||||| ||||||| |||| ||||||||||||||||        | |||||||||||||    
T  35529773 cggtctaaaagctactttaaaacaaagttaaaataaagc-cctttaaaaaaaagt-taaagctgtttggtttctttattttttttaattctaaagttatt 35529870  T
Q  144 tttgagttaaaagctgtttg 163  Q
    ||| ||||||||| ||||||    
T  35529871 tttaagttaaaagttgtttg 35529890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 875884 - 875826
Alignment:
Q  150 ttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||    
T  875884 ttaagagctgtttggcaaaatattgtacaaaactttgaatt---tattttttggtggtgtct 875826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 46088720 - 46088782
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    |||||||||||||||||| ||| ||||| ||||||  |||||||||||||||||||| |||||    
T  46088720 agttctaaagttatttttaagtgaaaagttgtttggaaaaatattgtacaaaacttttaattt 46088782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 34433763 - 34433803
Alignment:
Q  161 ttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  34433763 ttgacaaaatattgtacaaaacttttaatttattatttttt 34433803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 42617767 - 42617825
Alignment:
Q  153 aaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||| |||||||||||||||| ||| |||||||||||||||| ||| ||||    
T  42617767 aaagttgtttgataaaatattgtacaaaaatttaaatttattattttttgatggcgtct 42617825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 10617684 - 10617639
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaacttt 185  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||    
T  10617684 tatttttaagttaaaagttgtttggcaaaatattgtacaaaacttt 10617639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 54835790 - 54835729
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||| ||||||||| |||||| ||||||||||||||||| ||||| ||| || ||||||    
T  54835790 tatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgatttttttttttttt 54835729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 54113577 - 54113526
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaa 96  Q
    |||||||||||||||||||||||||| |||||||| || || |||||||||||    
T  54113577 cggtctaaaaactactttaaaacaaagttaaaataaag-tcctttaagaaaaa 54113526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 875926 - 875883
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttt 87  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||    
T  875926 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt 875883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 8238972 - 8238921
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaa 180  Q
    |||| ||||||||||||| ||||||| | |||||| ||||||||||||||||    
T  8238972 agttttaaagttatttttaagttaaatgttgtttggcaaaatattgtacaaa 8238921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 44075414 - 44075456
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  44075414 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 44075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 54203667 - 54203709
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttt 87  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||    
T  54203667 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt 54203709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 916313 - 916278
Alignment:
Q  165 caaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||| ||||||||||||||||||||    
T  916313 caaaatattgtacaaa-ctttgaatttattatttttt 916278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 32754222 - 32754151
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||| || |||| |||||||   |||||||||||||||||||| ||||||||||||| || ||||||    
T  32754222 agttttaaagctacttttaagttaaatattgtttgacaaaatattgtac-aaactttgaattttttttttttt 32754151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 18956216 - 18956380
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||        |||||||||||||||||    
T  18956216 gtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaagactaaagctgtttggtttctttattttttttagttctaaagttatttt 18956314  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  18956315 tgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 18956380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 38045815 - 38045648
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  38045815 cggtctaaaaactactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 38045717  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  38045716 ttttgagttaaaagctgtttggcaaaatattgtacaaagctttgaatttattattttttggtggtgtct 38045648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 37669184 - 37669349
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||| ||||||         | ||||||||||||    
T  37669184 cggtctaaaaactactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtatctttatttttttttaattctaaagttat 37669282  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37669283 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 37669349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 40239811 - 40239979
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  40239811 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaaactgtttggtttctttattttttttgtagttctaaagtta 40239909  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40239910 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 40239979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 207
Target Start/End: Complemental strand, 12908069 - 12907906
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||         ||||||||||||||    
T  12908069 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggccaaagctgtttggtttctttatttttttttagttctaaagttat 12907971  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggt 207  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12907970 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 12907906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 29448631 - 29448799
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  29448631 cggtctaaaagctactttaaaacaaagttaaaataaagttcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 29448729  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29448730 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 29448799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 27031153 - 27031311
Alignment:
Q  55 ctactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagttatttttgagtt 151  Q
    ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||           |||||||||||||||||||||||    
T  27031153 ctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttttagttctaaagttatttttgagtt 27031251  T
Q  152 aaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27031252 aaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 27031311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 32960712 - 32960878
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    ||||||||| ||||||||||||||| |||||||| | |||||| ||||||||| ||||| ||||||||||||||||         |||||||||||||||    
T  32960712 ggtctaaaagctactttaaaacaaagttaaaataaaactcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatt 32960810  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  32960811 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttgatagtgtct 32960878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 10999271 - 10999103
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| ||||||||| | ||| |||||||||||||||           |||||||||||||    
T  10999271 cggtctaaaagctactttaaaacaaagttaaaataaaactcttt-aagaaaaaggccaaagctgtttggtttcttttatttttttttagttctaaagtta 10999173  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10999172 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 10999103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 209
Target Start/End: Complemental strand, 43156349 - 43156185
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||         ||||||||||||||    
T  43156349 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttat 43156251  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  43156250 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaa-ttattattttttggtggtgt 43156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 40789337 - 40789170
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| | ||||||||||||| |||||||| || ||||| |||||||||  |||| ||||||||||||||||         |||| |||||||||    
T  40789337 cggtctaaaagcaactttaaaacaaagttaaaataaagttcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagttataaagttat 40789239  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40789238 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 40789170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 41427120 - 41426954
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |  |  |||||||||||   |||| ||||||||||||||||         ||||||||||||||    
T  41427120 cggtctaaaagctactttaaaacaaagttaaaataaa--ttctttaagaaaaaagttaaagctgtttggtttctttatttttttgtagttctaaagttat 41427023  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41427022 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 41426954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 23639341 - 23639497
Alignment:
Q  55 ctactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttttgagttaa 153  Q
    ||||||||||||||| |||||||| || ||||| ||||||||| |||||  ||||||||||||||          | |||||||||||||||||||||||    
T  23639341 ctactttaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagttgtttggtttctttttttttttttaattctaaagttatttttgagttaa 23639439  T
Q  154 aagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23639440 aagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 23639497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 1448258 - 1448091
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||| ||||| ||| ||||||||||| |||||||| | |||||| | ||||||| ||| | ||||||||||||||||         |||||||||| |||    
T  1448258 cggtttaaaagctattttaaaacaaagttaaaataaatctctttca-gaaaaaggctagagctgtttggtttctttatttttttttagttctaaagctat 1448160  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1448159 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 1448091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 4399981 - 4400148
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| ||| |||| |  ||||||| ||||  |||||||||||||||        |||||||||||||||    
T  4399981 cggtctaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaaagt-taaagttgtttggtttctttatttttttcagttctaaagttatt 4400079  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  4400080 tttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttaatatttttttggtggtgtct 4400148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 17278314 - 17278145
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| || ||||| |||||||| ||||||||| | ||| ||||||| ||| |||            ||||||||||||    
T  17278314 cggtctaaaagctactttaaaacaaagttgaaataaagctcttt-aagaaaaaggccaaagctgtttgatttttttttttttttttttagttctaaagtt 17278216  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17278215 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 17278145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 41343235 - 41343392
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||||||||||||||| |||||||| |||||||| | ||||||| |||||  ||||| |||||||||         ||||||||||||||    
T  41343235 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaaag-ctaaagttgttttgtttctttattttgttttagttctaaagttat 41343333  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  41343334 ttttaagttaaatgttgtttggcaaaatattgtacaaaactttgaatttattatttttt 41343392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 45620720 - 45620640
Alignment:
Q  131 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45620720 ttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 45620640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 4407957 - 4408118
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||  ||||| ||||||||||| |||         |||| |||||||||||    
T  4407957 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaagctaaagctgtttggtttattt----tttttagttttaaagttattt 4408051  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat-tttttggtggtgtct 211  Q
    || |||||||||||||||| ||||||||||||  |||||||||||||||||| |||||||||||||||    
T  4408052 ttaagttaaaagctgtttggcaaaatattgta-taaactttgaatttattatctttttggtggtgtct 4408118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 4406541 - 4406709
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | |||||||| ||||  |||||| ||||||||          ||||| |||||||    
T  4406541 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagttgtttgttttctttattttttttttagttccaaagtta 4406639  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
     |||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4406640 attttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 4406709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 202
Target Start/End: Original strand, 44651793 - 44651955
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctctttta---agaaaaagtctaaacctgtttggttt-ctttannnnnnnnagttctaaagt 139  Q
    ||||||||||  |||||||||||||| |||||||| ||| |||| |   | |||||  |||||| |||||||||| |||||        |||||||||||    
T  44651793 cggtctaaaagttactttaaaacaaagttaaaataaagccctttaagaaaaaaaaaaactaaacttgtttggttttctttattttttttagttctaaagt 44651892  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttg 202  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  44651893 tatttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttattattttttg 44651955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 47840881 - 47840722
Alignment:
Q  50 aaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgag 149  Q
    |||||||||||||| ||||| |||||||| |||| ||| | ||||||  |||||  |||||||||||||||        |||||||||||||||||| ||    
T  47840881 aaaaactactttaagacaaagttaaaataaagctatttaaggaaaaaa-ctaaagttgtttggtttctttattttttttagttctaaagttatttttaag 47840783  T
Q  150 ttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    || |||| |||||| |||||||||||||||||||||||||||| ||||||||  |||||||    
T  47840782 ttgaaagttgtttggcaaaatattgtacaaaactttgaatttagtatttttttatggtgtc 47840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 5526259 - 5526108
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| ||||||||||||||| |||||||| |  ||||||| |||||| | ||||  |||||||||||||||         |||||||||||||||||    
T  5526259 tctaaaagctactttaaaacaaagttaaaataaaattcttttaggaaaaa-tgtaaagttgtttggtttctttatttttttttagttctaaagttatttt 5526161  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    | |||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  5526160 taagttaaaag---tttgacaaaatattgtacaaaactttgaatttattatttttt 5526108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 201
Target Start/End: Complemental strand, 4404447 - 4404295
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| || | ||| | |||||||| |||| ||||||||||||||||        ||||||||| ||  |||    
T  4404447 gtctaaaagctactttaaaacaaagttaaaataaagttatttaaggaaaaagt-taaagctgtttggtttctttattttttttagttctaaaatt--ttt 4404351  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    | ||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  4404350 taagttaaaagttgtttggcaaaatattgtacaaaacattgaatttattatttttt 4404295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 4492356 - 4492506
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttga 148  Q
    ||||| ||||||||||||||| |||||||| |||||||| |  ||||||| |||| |||||||| |||||||        |||||||| ||||||||  |    
T  4492356 taaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaagctgtttggattctttattttttttagttctaaggttattttaaa 4492454  T
Q  149 gttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
     ||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  4492455 -ttaaaagttatttggcaaaatattgtacaaaactttgaatttattatttttt 4492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 23154789 - 23154632
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| || | ||| | |||||||| |||| | ||||||||||||||        |||||||||||||||||    
T  23154789 gtctaaaagctactttaaaacaaagttaaaataaagttatttaaggaaaaagt-taaagccgtttggtttctttattttttttagttctaaagttatttt 23154691  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtg 205  Q
      ||||||||| |||||| ||||||||||||||||||| ||| ||| || |||| |||||    
T  23154690 a-agttaaaagttgtttggcaaaatattgtacaaaactatgattttttttttttgtggtg 23154632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 4615454 - 4615384
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgt 209  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  4615454 tatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 4615384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 201
Target Start/End: Complemental strand, 5483562 - 5483406
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnna--gttctaaagttatt 143  Q
    |||||||| ||||||||||||||| |||||||| | |||||  | |||||||| |||| ||||||||||||||||           ||||||||||||||    
T  5483562 gtctaaaagctactttaaaacaaagttaaaataaaactcttaaaggaaaaagt-taaagctgtttggtttctttatatttttttttgttctaaagttatt 5483464  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| ||||||  |||||||||||||||||||||| ||| || ||||||    
T  5483463 tttaagttaaaagttgtttggaaaaatattgtacaaaactttgatttttttttttttt 5483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 6607169 - 6607088
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgt 209  Q
    ||||||||| |||||||| |||||||| ||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  6607169 agttctaaatttatttttaagttaaaatctgtttggcaaaatattatacaaaactttaaatttattatttttttggtggtgt 6607088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 21134356 - 21134436
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| |||| || |||||||| ||||||    
T  21134356 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaactttg-atttttttttttttggcggtgtc 21134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 20482352 - 20482280
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||| ||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  20482352 agttttaaagttttttttaatttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 20482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 36769298 - 36769226
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||| ||||||||| |||||| |||||||  |||||||||||| |||||||||||||||    
T  36769298 agttctaaagttatttttaagttaaaagttgtttggcaaaataaagtacaaaactttaaatttattatttttt 36769226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 210
Target Start/End: Original strand, 20135005 - 20135158
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattttt 146  Q
    ||||||| ||||||||||||||| |||||||| ||| |||| ||||||||  ||||| ||||||||||||||||        | |||||||||||         
T  20135005 tctaaaagctactttaaaacaaagttaaaataaagcccttt-aagaaaaaagctaaagctgtttggtttctttattttttttaattctaaagtta----- 20135098  T
Q  147 gagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
         ||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||||    
T  20135099 -----aaaagttgtttggcaaaatattgtacaaaactttgaatttaatatttttttggtggtgtc 20135158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 36765734 - 36765592
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||| ||||||||||| |||||||| || ||||| | ||||||  |||||  |||||||||||||||          |||||||||||||    
T  36765734 cggtctaaaagctattttaaaacaaagttaaaataaagttctttaaggaaaaaa-ctaaagttgtttggtttctttattatttttttagttctaaagtta 36765636  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaacttt 185  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||    
T  36765635 tttttaagttaaaagttgtttgacaaaataaagtacaaaacttt 36765592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 40035944 - 40036083
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| |||||||| | |||||| ||||||||   |||| ||||||| ||||||||        |||| ||||||||||    
T  40035944 cggtctaaaagctactttaaaataaagttaaaataaaactcttt-aagaaaaaaggtaaagctgtttgatttctttatttttat-agttttaaagttatt 40036041  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaacttt 185  Q
    ||| ||||||||| | |||| |||||||||||||||||||||    
T  40036042 tttaagttaaaagttttttggcaaaatattgtacaaaacttt 40036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 43111175 - 43111100
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||| |||||| ||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||| ||||    
T  43111175 cggtctaaaagctacttcaaaacaaaattaaaataaagctc-tttaagaaaaaggctaaagctgtttggttttttta 43111100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 3840079 - 3840021
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattt 198  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||    
T  3840079 tatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatctaatattt 3840021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 4616218 - 4616111
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| || |||||  | ||| ||||||| ||||||||        |||||||||||||||    
T  4616218 cggtctaaaaaatactttaaaacaaaattaaaataaagctctttaaaaaaaaaaac-aaagctgtttgatttctttattttttttagttctaaagttatt 4616120  T
Q  144 tttgagtta 152  Q
    ||| |||||    
T  4616119 tttaagtta 4616111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 16933500 - 16933550
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  16933500 tttgacaaaatattgtacaaaacattgaatttattatttttttggtggtgt 16933550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 16938883 - 16938933
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  16938883 tttgacaaaatattgtacaaaacattgaatttattatttttttggtggtgt 16938933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 37143584 - 37143512
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    ||||||| ||||||||||| ||| |||||||| | |||||| |||||||||| |||| ||||||||||||||||    
T  37143584 tctaaaagctactttaaaataaagttaaaataaaactctttaaagaaaaagt-taaagctgtttggtttcttta 37143512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 43111076 - 43111035
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  43111076 tttggcaaaatattgtacaaaactttgaatttattatttttt 43111035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 20762957 - 20762915
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20762957 tgtttgacaaaatattgtacaaa-ctttgaatttattatttttt 20762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 17816650 - 17816601
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatt 190  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  17816650 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 17816601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 19050351 - 19050400
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatt 190  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  19050351 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 19050400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 19036360 - 19036402
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  19036360 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 19036402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 20718276 - 20718234
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  20718276 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 20718234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 29488523 - 29488481
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  29488523 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 29488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 33232655 - 33232697
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  33232655 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 33232697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 34284797 - 34284839
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  34284797 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 34284839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 35910326 - 35910287
Alignment:
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttga 187  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  35910326 agttaaaagttgtttgacaaaatattatacaaaactttga 35910287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 19758160 - 19758190
Alignment:
Q  181 actttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||||||||||    
T  19758160 actttgaatttattattttttggtggtgtct 19758190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 16933401 - 16933478
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctctttta-agaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||| | | |||||  |||||  |||||||||||||||    
T  16933401 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaagaaaaaaaaactaaagttgtttggtttcttta 16933478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 16938784 - 16938861
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctctttta-agaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||| | | |||||  |||||  |||||||||||||||    
T  16938784 cggtctaaaagctattttaaaacaaagttaaaataaagctctttaagaaaaaaaaactaaagttgtttggtttcttta 16938861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 21134127 - 21134160
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaata 78  Q
    ||||||||||||||||||||| ||||||||||||    
T  21134127 ggtctaaaaactactttaaaataaaattaaaata 21134160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 42828881 - 42828956
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtg 205  Q
    |||| ||||| || |||| ||||||| | |||||||||||||||||||| ||||||||| ||| || |||| |||||    
T  42828881 agttttaaagctacttttaagttaaatgttgtttgacaaaatattgtac-aaactttgattttttttttttatggtg 42828956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 18593525 - 18593692
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  18593525 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 18593623  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18593624 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 18593692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 32244535 - 32244369
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||        ||||||| |||||||    
T  32244535 cggtctaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaggctaaaactgtttggtttctttattttttttagttctacagttatt 32244437  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32244436 tttgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 32244369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 3850384 - 3850217
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||| ||||| ||||||| ||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  3850384 cggtgtaaaagctactttcaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 3850286  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3850285 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 3850217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 20791705 - 20791538
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    ||||||||||| |||||||||||||| |||||||| |||||||| |||||||||  |||  ||||||||||||||||         ||||||||||||||    
T  20791705 cggtctaaaaaatactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaggctgtttggtttctttatttttttttagttctaaagttat 20791607  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  20791606 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtct 20791538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 559886 - 559719
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    ||||||||||  |||||||||||||| |||||||| |||||||| |||||||||  ||||  |||||||||||||||         ||||||||||||||    
T  559886 cggtctaaaagttactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagttgtttggtttctttatttttttgtagttctaaagttat 559788  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  559787 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttctggtggtgtct 559719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 34247671 - 34247827
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| | |||||||| |||| ||||||||||||||||        |||||||||||||||    
T  34247671 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaagt-taaagctgtttggtttctttattttttttagttctaaagttatt 34247769  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  34247770 tttaagttaaaagttgtttgaaaaaatattgtacaaaactttgaatttattatttttt 34247827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 28472380 - 28472213
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttat 142  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||   ||||  |||||||||||||||          ||||||||||||||    
T  28472380 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaagataaagttgtttggtttctttatttattttttagttctaaagttat 28472282  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28472281 ttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 28472213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 33945738 - 33945905
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnna----gttctaaagttat 142  Q
    |||||||  |||||||||||||| |||||||| |||| ||||||||||||| ||||| |||||| ||||||||              |||||||||||||    
T  33945738 tctaaaagatactttaaaacaaagttaaaataaagct-ttttaagaaaaagactaaagctgttttgtttcttttttttttttttttggttctaaagttat 33945836  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33945837 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 33945905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 7541263 - 7541098
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | ||||||| ||||| ||||||||||||||||        |||||||||||||||    
T  7541263 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaag-ctaaagctgtttggtttctttattttttttagttctaaagttatt 7541165  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    ||| ||||||||| |||||| |||||| ||||||||||| || |||||||||||||||  |||||||    
T  7541164 tttaagttaaaagttgtttggcaaaatgttgtacaaaacattcaatttattatttttttctggtgtc 7541098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 24046478 - 24046642
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| | || ||| ||||||||| ||||| ||||||  ||  ||||        |||||||||||||||    
T  24046478 cggtctaaaagctactttaaaacaaagttaaaataaaactattt-aagaaaaaggctaaagctgtttctttattttatttttt--agttctaaagttatt 24046574  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  24046575 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatcctttggtggtgtct 24046642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 6018490 - 6018656
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    |||||||||  |||||||||||||| |||||||| |||||||| | |||||||| |||| ||||||||||||||||         || ||||||||||||    
T  6018490 ggtctaaaagttactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttggtttctttatttttttttagatctaaagttatt 6018588  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    ||| ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  6018589 tttaagttaaaagttgtttggcaaaatattgtacaaaactttaaatttattatttttttggtggtgtc 6018656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 17505645 - 17505488
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||   |||| ||||||||||||||||         ||||||||||||||    
T  17505645 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaaattaaagctgtttggtttctttatttatttttagttctaaagttat 17505547  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||    
T  17505546 ttttaagttaaaagttgtttgataaaatattatacaaaactttgaatttataatttttt 17505488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 19989048 - 19988908
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||| ||||||| | |||| ||||||||||||||||        |||||||||||||||    
T  19989048 cggtctaaaatctactttaaaacaaagttaaaataaagctctttt-agaaaaaatgtaaagctgtttggtttctttattttttatagttctaaagttatt 19988950  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaacttt 185  Q
    ||| ||||||||| ||| || |||||||||||||||||||||    
T  19988949 tttaagttaaaagttgtgtggcaaaatattgtacaaaacttt 19988908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 29859569 - 29859401
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtta 141  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||   ||||  |||||||||||||||           ||||||||  |||    
T  29859569 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaagataaagttgtttggtttctttatttatttttttagttctaagctta 29859471  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  29859470 tttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttattatttttttggtggtgtc 29859401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 29043354 - 29043209
Alignment:
Q  55 ctactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaa 154  Q
    ||||||||||||||| ||||||||||||||||| | |||||||   |||  |||||||||||||||        |||||||||||||||||| |||||||    
T  29043354 ctactttaaaacaaagttaaaatagagctctttaaggaaaaagctaaaagttgtttggtttctttattttttt-agttctaaagttatttttaagttaaa 29043256  T
Q  155 agctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || |||||| |||||||||||||| |||||||||||| || ||||||    
T  29043255 agttgtttggcaaaatattgtacataactttgaattttttttttttt 29043209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 34206927 - 34207075
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||| ||||||||||||   | || ||||||| ||| |||         |||||||||||||||    
T  34206927 cggtctaaaagctactttaaaacaaagttaaaataaagct-ttttaagaaaaaagttgaagctgtttgattttttt--------tagttctaaagttatt 34207017  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||||||    
T  34207018 tttaagttaaaagttgtttggaaaaatattgtacaaaattttgaatttattatttttt 34207075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 6833703 - 6833553
Alignment:
Q  51 aaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttttgag 149  Q
    |||| ||||||||||||||  ||||||| || ||||| | |||||||| ||||  |||||||||||||||         || |||||| |||||||| ||    
T  6833703 aaaattactttaaaacaaagataaaataaagttctttgaggaaaaagt-taaagttgtttggtttctttatttttttttagatctaaaattatttttaag 6833605  T
Q  150 ttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  6833604 ttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 6833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 24162948 - 24162794
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||||||||||||||||||| |||||||| ||  | || | |||||||| |||| | ||||||||||||||         |||||||||||||||||    
T  24162948 tctaaaaactactttaaaacaaagttaaaataaagtccgttaaggaaaaagt-taaagccgtttggtttctttatttttttttagttctaaagttatttt 24162850  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    | ||| ||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  24162849 taagtaaaaagttgtttggcaaaatattatacaaaattttgaatttattatttttt 24162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 5414482 - 5414634
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttttg 147  Q
    ||||| ||| ||||||||||| |||||||| | |||||| | ||||||| |||||  |||||| ||||||||         ||||||||||||||||||     
T  5414482 taaaagctattttaaaacaaagttaaaataaaactctttaaggaaaaag-ctaaagttgtttgatttctttatttttttttagttctaaagttattttta 5414580  T
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||    
T  5414581 agttaaaagttgtttggcaaaatattgtacaaaacttttaatttattaattttt 5414634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 173062 - 173134
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  173062 agttctaaaattatttttaagttaaaagttgtttgacaaaatattatacaaaactttgtatttattatttttt 173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 10945781 - 10945711
Alignment:
Q  131 ttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||| | ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  10945781 ttctaaagttatttctaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 10945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 10943067 - 10943182
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| |||||||| | ||||||| ||||| ||||||||||||||||         ||||||||||||||||    
T  10943067 gtctaaaatctactttaaaacaaagttaaaataaagctctttaaggaaaaag-ctaaaactgtttggtttctttatttttttttgttctaaagttatttt 10943165  T
Q  146 tgagttaaaagctgttt 162  Q
    | ||||||||| |||||    
T  10943166 taagttaaaagttgttt 10943182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 172967 - 173042
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||||||||||||||||||| |||||||| | |||||| | |||||||| |||| ||||||||||| ||||    
T  172967 cggtctaaaaactactttaaaacaaagttaaaataaaactctttaaggaaaaagt-taaagctgtttggtttattta 173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 3053915 - 3053987
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttg 202  Q
    |||| ||||| ||||||| ||||||| | |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  3053915 agttttaaagctatttttaagttaaatgttgtttggcaaaatattgtac-aaactttaaatttattattttttg 3053987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 8867037 - 8866970
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat 196  Q
    |||| ||||| ||||||| ||||||||| |||||| ||||||||||||  || |||||||||||||||    
T  8867037 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtatgaagctttgaatttattat 8866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 18314074 - 18314008
Alignment:
Q  134 taaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||||||| | ||||| | ||| || |||||||||||||||| ||||||||||||||||||||    
T  18314074 taaagttatttttaatttaaatgttgtgtggcaaaatattgtacaaa-ctttgaatttattatttttt 18314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 33976056 - 33976004
Alignment:
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||| | |||||||||||||||| |||||| ||||||||||||||||||||    
T  33976056 agttaaatgttgtttgacaaaatattatacaaa-ctttgaatttattatttttt 33976004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 29977784 - 29977709
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||||||| ||||||||||| || ||||| |||||||| | |||||||| ||||  |||||| ||||||||    
T  29977784 cggtctaaaaactattttaaaacaaagtttaaataaagctctttaaggaaaaagt-taaagttgtttgatttcttta 29977709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 247462 - 247420
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  247462 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 12582487 - 12582529
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  12582487 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 12582529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Complemental strand, 29976351 - 29976317
Alignment:
Q  166 aaaatattgtacaaaactttgaatttattattttt 200  Q
    |||||||||||||||||||| ||||||||||||||    
T  29976351 aaaatattgtacaaaactttaaatttattattttt 29976317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 55991979 - 55991810
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||           ||||||||| ||    
T  55991979 cggtctaaaaactactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttttagttctaaaatt 55991881  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55991880 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 55991810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 1166796 - 1166630
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |  ||||||| |||| ||||||||||||||||        |||||||||||||||    
T  1166796 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaaactgtttggtttctttattttttttagttctaaagttatt 1166698  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1166697 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 1166630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 1169278 - 1169112
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |  ||||||| |||| ||||||||||||||||        |||||||||||||||    
T  1169278 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaaactgtttggtttctttattttttttagttctaaagttatt 1169180  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1169179 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 1169112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 7400123 - 7400291
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  7400123 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttattttttttttagttctaaagtta 7400221  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7400222 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 7400291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 53274787 - 53274619
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  53274787 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 53274689  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53274688 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 53274619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 7365954 - 7365787
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||         ||||||||||||||    
T  7365954 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttat 7365856  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7365855 ttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 7365787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 55188328 - 55188161
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    ||||||||||| || ||||||| ||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  55188328 cggtctaaaaattattttaaaataaagttaaaataaagctcttt-aagaaaaaggctaaaactgtttggtttctttatttttttttagttctaaagttat 55188230  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55188229 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 55188161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 13890909 - 13891078
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | ||||| || |||| ||||||||||||||||           ||||||||||||    
T  13890909 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaggt-taaagctgtttggtttctttatttttttttttagttctaaagtt 13891007  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13891008 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 13891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 27288389 - 27288556
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||| ||||||||||         ||||||||||||||    
T  27288389 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgttcggtttctttatttttttgtagttctaaagttat 27288487  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  27288488 ttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtct 27288556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 11200992 - 11200824
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  11200992 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 11200894  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  11200893 tttttaagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtct 11200824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 26111539 - 26111369
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaaga-aaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagt 139  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| |||| ||||| ||||| ||||||||||||||||           |||||||||||    
T  26111539 cggtctaaaagctactttaaaacaaagttaaaataaagttcttt-aagataaaaggctaaagctgtttggtttctttatttttttttttagttctaaagt 26111441  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26111440 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttgtggtgtct 26111369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 36189974 - 36190141
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaa-gtctaaacctgtttggtttctttannnnnnnn-agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||| ||| ||| ||||||||||||||||         |||||||||||||    
T  36189974 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaatgtc-aaatctgtttggtttctttatttttttttagttctaaagtta 36190071  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36190072 tttttgagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattattttttgatggtgtct 36190141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 11966923 - 11967086
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattttt 146  Q
    |||||||  |||||||||||||| |||||||| | |||||| |||||||||  |||| ||||||||||||||||        ||||||||| ||||||||    
T  11966923 tctaaaagttactttaaaacaaagttaaaataaaactcttt-aagaaaaaggttaaaactgtttggtttctttattttttttagttctaaaattattttt 11967021  T
Q  147 gagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11967022 gagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtagtgtct 11967086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 40951103 - 40950936
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||| ||| |||||||| | |||||| |||||||||  |||| ||||||| ||||||||         ||||||||||||||    
T  40951103 cggtctaaaagctactttaaaataaagttaaaataaaactcttt-aagaaaaaggttaaagctgtttgatttctttatttttttatagttctaaagttat 40951005  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40951004 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 40950936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 55208400 - 55208570
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    ||||||||||  |||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||            ||||||| |||    
T  55208400 cggtctaaaagttactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttttagttctacagt 55208498  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55208499 tatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 55208570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 34264550 - 34264714
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| ||||||||| ||||| |||||||| | |||||| |||||||||  |||| ||||||||||||||||         |||||||||||||||||    
T  34264550 tctaaaagctactttaatacaaagttaaaataaaactcttt-aagaaaaaggttaaagctgtttggtttctttatttttttgtagttctaaagttatttt 34264648  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34264649 tgagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 34264714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 17624821 - 17624651
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| |  |||||| ||||| ||||||||||||||||           ||||||||||||    
T  17624821 cggtctaaaagctactttaaaacaaagttaaaataaagttctttaagaaaaaaggctaaagctgtttggtttctttatttttttttttagttctaaagtt 17624722  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17624721 atttttaagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 17624651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 32206509 - 32206678
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| |||||||||  |||| | ||||| ||||||||           ||||||||||||    
T  32206509 cggtctaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaggttaaagccgtttgatttctttatttatttttttagttctaaagtt 32206607  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32206608 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 32206678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 17976604 - 17976438
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | ||||||| ||||| ||||||||||||||||        ||||||||| |||||    
T  17976604 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaag-ctaaaactgtttggtttctttattttttttagttctaaatttatt 17976506  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||| ||||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||||||||    
T  17976505 tttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttattatttttttggtggtgtc 17976438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 23628990 - 23628826
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| || ||||| | |||||| | |||| ||||||||||||||||        |||||||||||||||||    
T  23628990 gtctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaact-taaaactgtttggtttctttattttttttagttctaaagttatttt 23628892  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattt-tttggtggtgtc 210  Q
    | ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  23628891 taagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttctttggtggtgtc 23628826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 8848097 - 8847929
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||||| || ||||||||||||||| |||||||| |||||||| | |||||||| |||| ||||||||||||||||          |||||||||||||    
T  8848097 cggtctacaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttggtttctttattttttttttagttctaaagtta 8847999  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  8847998 tttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 8847929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 10137883 - 10137965
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10137883 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 10137965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 28116749 - 28116924
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnna----------gttc 133  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| |||||  |||||||||||||||        |          ||||    
T  28116749 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagttgtttggtttctttattttttttatttttttttagttc 28116847  T
Q  134 taaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  28116848 taaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtc 28116924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 6940178 - 6940260
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6940178 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggcgtct 6940260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 22557120 - 22556965
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaag--aaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    ||||||||||||||||||| ||| |||||||| | | ||||||||  |||||  ||||| ||||||||||||||||        ||||||||||||||||    
T  22557120 tctaaaaactactttaaaataaagttaaaataaaac-cttttaaggaaaaaaaactaaaactgtttggtttctttatttttattagttctaaagttattt 22557022  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  22557021 ttaagttaaaagttgtttgacaaaatattttacaaaactttgaatttattatttttt 22556965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 24303720 - 24303884
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    ||||||||| ||||||||||| ||| |||||||| |||  ||| | ||||||| ||||| || |||||||||||||        ||||||||||||||||    
T  24303720 ggtctaaaagctactttaaaataaagttaaaataaagccatttaaggaaaaag-ctaaagctatttggtttctttattttttttagttctaaagttattt 24303818  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    || ||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  24303819 ttaagttaaaagttatttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 24303884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 39651889 - 39651736
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||||||||||||||||||| |||||||| |||||||| | |||||||| |||| ||||||||||||||||        |||  ||||||||||    
T  39651889 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttggtttcttta-tttttagagt--taaagttatt 39651794  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| |||||| |||||||||||||||||||| || ||||||    
T  39651793 tttaagttaaaagttgtttggcaaaatgttgtacaaaactttgaattttttttttttt 39651736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 18138495 - 18138327
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttt----taag-aaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagtt 140  Q
    |||||||| ||||||||||| ||| |||||||| ||||||||    |||| ||||||| ||||  |||||| ||||||||        ||||||||||||    
T  18138495 gtctaaaagctactttaaaataaagttaaaataaagctctttaatttaaggaaaaagt-taaagttgtttgatttctttattttttttagttctaaagtt 18138397  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||| ||||||||| | |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  18138396 atttttaagttaaaagttctttggcataatattgtacaaaactttgaatttattattttttggtggtgtc 18138327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 201
Target Start/End: Original strand, 28361410 - 28361565
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| | ||||||| ||||| ||||||||||||||||        |||| | || ||||||    
T  28361410 ggtctaaaagctactttaaaacaaagttaaaataaagctctttcaggaaaaag-ctaaagctgtttggtttctttattttttttagttatgaatttattt 28361508  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || ||||||||| |||||| ||||||||||||||||||||||| ||| || ||||||    
T  28361509 ttaagttaaaagttgtttggcaaaatattgtacaaaactttgatttttttttttttt 28361565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 202
Target Start/End: Complemental strand, 8151359 - 8151202
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||  |||||  |||||||||||||||         ||||||||| ||||    
T  8151359 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaaactaaagttgtttggtttctttatttttttttagttctaaaattat 8151261  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttg 202  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| || |||||||    
T  8151260 ttttaagttaaaagttgtttgacaaaat-ttgtacaaaactttgaatttttttttttttg 8151202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 43117664 - 43117519
Alignment:
Q  55 ctactttaaaacaaaattaaaatagagctcttttaag-aaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaa 153  Q
    |||||| |||||||| |||||||| |||| ||||||| ||||||| ||||  |||||||||||||||        |||||||||||| ||||| ||||||    
T  43117664 ctacttaaaaacaaagttaaaataaagct-ttttaagtaaaaagt-taaagttgtttggtttctttattttttttagttctaaagttgtttttaagttaa 43117567  T
Q  154 aagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  43117566 aagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 43117519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 37873560 - 37873728
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaa-tagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||||||| ||||||||||||||| |||||| || |||||||| | ||||||| ||||| ||||||||||||||||          |||||||||||||    
T  37873560 ggtctaaaagctactttaaaacaaagttaaaaataaagctctttaaggaaaaag-ctaaaactgtttggtttctttattttttttttagttctaaagtta 37873658  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    ||||| | ||||||| |||||| |||||||||||||||||  |||||||||||| |||||||||||||||    
T  37873659 tttttaaattaaaagttgtttggcaaaatattgtacaaaaagttgaatttattatttttttggtggtgtc 37873728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 40665675 - 40665513
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttattt 144  Q
    ||||||||| || ||||||||||| |||||||| ||  |||  || |||||| ||||| ||||||| ||||||||         ||||||||||||||||    
T  40665675 gtctaaaaattattttaaaacaaagttaaaataaagtcctt--aaaaaaaaggctaaagctgtttgatttctttatttttttttagttctaaagttattt 40665578  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgt 209  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40665577 ttaagttaaa-gctgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 40665513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 11181018 - 11180909
Alignment:
Q  91 gaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatt 190  Q
    |||||||| |||| ||||||||||||||||        |||||||||||||||||| ||||||||| |||||| |||||||||||||||||| |||||||    
T  11181018 gaaaaagt-taaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaacattgaatt 11180920  T
Q  191 tattatttttt 201  Q
    |||||||||||    
T  11180919 tattatttttt 11180909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 29099625 - 29099707
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||||||||| ||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  29099625 agttgtaaagttatttttcagttaaaagttgtttggcaaaatattgtataaaactttaaatttattattttttggtggtgtct 29099707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 41144305 - 41144377
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  41144305 agttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttt 41144377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 46045716 - 46045867
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||| ||| | ||||||||       |||||||||||||||         ||||||||||||||    
T  46045716 cggtctaaaagctactttaaaacaaagttaaaataaagctttttaaggaaaaagt-------tgtttggtttctttatttttttttagttctaaagttat 46045808  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  46045809 ttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 46045867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 20681348 - 20681186
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| ||||| || |||||||| ||||||||  ||||| |||||||||||||||         |||| ||||||||||    
T  20681348 cggtctaaaagctactttaaaataaagttaaa-taaagctctttaaagaaaaaa-ctaaagctgtttggtttcttt---ttttttagttttaaagttatt 20681254  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||| ||||||||| ||||||  |||||||||||| |||| |||||||||||||| |||||||||||||    
T  20681253 tttaagttaaaagttgtttggtaaaatattgtacgaaacattgaatttattatttttttggtggtgtc 20681186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 40952175 - 40952041
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||||||||||||||| ||| |||||||| || | ||| | |||||||| |||   |||||||||||||||        |||||||||||||||||    
T  40952175 gtctaaaaactactttaaaataaagttaaaataaagttttttaaggaaaaagtttaagt-tgtttggtttctttattttttttagttctaaagttatttt 40952077  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaa 181  Q
    | ||||||||| ||||||||||||||||||||||||    
T  40952076 taagttaaaagttgtttgacaaaatattgtacaaaa 40952041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 49125618 - 49125536
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    |||||||||||||||||| ||||||||| | |||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  49125618 agttctaaagttatttttaagttaaaagttctttggcataatattgtacaaaactttgaatttattatttttttggtggtgtc 49125536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 26097651 - 26097723
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  26097651 agttttaaagttattttgaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 26097723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 40849801 - 40849729
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  40849801 agttataaagttatttttaagttaaaaattgtttgtcaaaatattgtacaaaactttgaatttattatttttt 40849729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 32200716 - 32200799
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    |||| ||||||||||||| | ||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||    
T  32200716 agttttaaagttatttttaaattaaaagttgtttggcagaatattgtacaaaactttgaatttattacttttttggtggtgtct 32200799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 346520 - 346679
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||| ||||| ||||||||||||||| | |||||| |||||||| | |||||| | |||| ||||||||||||||||           ||||||||||||    
T  346520 cggtttaaaagctactttaaaacaaagtaaaaataaagctctttaaggaaaaaat-taaagctgtttggtttctttattattttttttagttctaaagtt 346618  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| || ||||||||| | |||| |||| ||||||||||||| ||||||||||||||||||    
T  346619 attgttaagttaaaagttctttggcaaactattgtacaaaacattgaatttattatttttt 346679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 8654246 - 8654386
Alignment:
Q  59 tttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaaagct 158  Q
    ||||||||||| |||||||| ||| |||| || |||||| |||||  |||||| ||||||||        || ||||||||||||||| ||||||||  |    
T  8654246 tttaaaacaaagttaaaataaagccctttaaa-aaaaaggctaaagttgtttgatttctttattctttttagatctaaagttatttttaagttaaaaatt 8654344  T
Q  159 gtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  8654345 gtttggcaaa-tattgtacaaaactttgaatttattatttttt 8654386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 51153622 - 51153499
Alignment:
Q  65 acaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttatttttgagttaaaagctgttt 162  Q
    ||||| |||||||| |||||||| | |||||||| |||| ||||||||||||||||          | |||||||||||||||| ||||||||| |||||    
T  51153622 acaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttggtttctttattttttttttaattctaaagttatttttaagttaaaagttgttt 51153524  T
Q  163 gacaaaatattgtacaaaactttga 187  Q
    | |||||||||||||||||||||||    
T  51153523 ggcaaaatattgtacaaaactttga 51153499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 34663912 - 34663865
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttattattttttggtggt 207  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  34663912 tttggcaaaatattgtacaaaactttgaatttattattttttggtggt 34663865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 34664978 - 34664904
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    ||||||||| ||||||||||||||| |||||||| || ||||| ||||||||| ||||| ||||||||||||||||    
T  34664978 ggtctaaaagctactttaaaacaaagttaaaataaagttctttaaagaaaaag-ctaaagctgtttggtttcttta 34664904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 24631018 - 24631181
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaa-aagtctaaacctgtttggtttctttannnnnnnnagttctaaagttat 142  Q
    |||||||||| ||||||| || |||| |||||||| || | |||||||||| |||| ||||  ||||| |||||||||        |||| ||||  |||    
T  24631018 cggtctaaaagctactttgaatcaaagttaaaataaaggt-ttttaagaaagaagt-taaagttgtttagtttctttattttttttagttttaaaactat 24631115  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    |||| ||||||||| ||||||  ||||||||||| || |||||||||||||||||||||||||||||    
T  24631116 ttttaagttaaaagttgtttggaaaaatattgta-aatactttgaatttattattttttggtggtgt 24631181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 32139481 - 32139419
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    |||| |||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  32139481 agttttaaaattatttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaattt 32139419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 51187690 - 51187608
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    |||||| ||||||||||| ||||||||| |||||| || |||| ||||||||| |||||||||| || |||||||||||||||    
T  51187690 agttctgaagttatttttaagttaaaagttgtttggcagaataatgtacaaaattttgaatttaatatttttttggtggtgtc 51187608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 10581901 - 10581944
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttt 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  10581901 cggtctaaaaactactttaaaacaaaattaaaataaagctcttt 10581944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 45472468 - 45472518
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  45472468 tttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 45472518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 30071414 - 30071346
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt 197  Q
    |||| ||||||||||||| | || |||| |||||| |||||||| |||||||||||| |||||||||||    
T  30071414 agttataaagttatttttaactttaaagttgtttggcaaaatatcgtacaaaactttaaatttattatt 30071346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 34664012 - 34663936
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| |  |||||| |||||  |||||||||||||||    
T  34664012 cggtctaaaagctactttaaaataaagttaaaataaagctctttaagaaaaaaggctaaagttgtttggtttcttta 34663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 26926968 - 26927010
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  26926968 tgtttgacaaaatattgtac-aaactttgaatttattatttttt 26927010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 45019226 - 45019261
Alignment:
Q  176 acaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||||    
T  45019226 acaaaactttgaatttattattttttggtggtgtct 45019261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 52620680 - 52620629
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  52620680 tttggcaaaatattgtacaaaactctgaatttattatttttttggtggtgtc 52620629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 25881982 - 25881932
Alignment:
Q  139 ttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaat 189  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||||    
T  25881982 ttatttttaagttaaaagttgtttagcaaaatattgtacaaaactttgaat 25881932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 29346238 - 29346287
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatt 190  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  29346238 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 29346287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 35832002 - 35832051
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatt 190  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  35832002 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatt 35832051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 52620779 - 52620704
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    ||||||||||  |||||||||||||| |||||||| ||||| |||||||||||  |||||  | |||||||||||||    
T  52620779 cggtctaaaagttactttaaaacaaagttaaaataaagctc-tttaagaaaaaaactaaagttatttggtttcttta 52620704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 10262027 - 10262069
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  10262027 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 10262069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 21562428 - 21562386
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  21562428 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 21562386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 24080098 - 24080140
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  24080098 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 24080140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 43329949 - 43329907
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  43329949 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 43329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 45019181 - 45019224
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttt 87  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||    
T  45019181 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt 45019224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 41106098 - 41106027
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttc 116  Q
    ||||||||||||| ||||||||||||  ||||||| ||| | ||||||||| |  ||||| ||||||||||||    
T  41106098 cggtctaaaaactcctttaaaacaaagataaaataaagc-cctttaagaaagaagctaaagctgtttggtttc 41106027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 33373735 - 33373902
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||         ||||||||||||||    
T  33373735 cggtctaaaaactactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttat 33373833  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33373834 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 33373902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 11583314 - 11583149
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||        |||||||||||||||    
T  11583314 cggtctaaaagctactttaaaacaaa-ttaaaataaagctcttt-aagaaaaaggccaaagctgtttggtttctttattttttttagttctaaagttatt 11583217  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11583216 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 11583149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 39326959 - 39327125
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| ||||||||| |||||  |||||||||||||||        |||||||||||||||    
T  39326959 cggtctaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaggctaaagttgtttggtttctttattttttttagttctaaagttatt 39327057  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39327058 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 39327125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 7833705 - 7833538
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  7833705 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 7833607  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7833606 ttttgagttaaaaactgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 7833538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 17585675 - 17585508
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  17585675 cggtctaaaagctactttaaaacaaagttaaaataaaactcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 17585577  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17585576 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 17585508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 11754146 - 11754308
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| |||||||||| |||||         |||||||||||||||||    
T  11754146 tctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggttactttatttttttttagttctaaagttatttt 11754244  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11754245 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 11754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 33818010 - 33818176
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||| ||||||||| |||||  |||||| ||| ||||        |||||||||||||||    
T  33818010 cggtctaaaagctattttaaaacaaagttaaaataaagctcttt-aagaaaaagactaaagttgtttgatttttttattttttttagttctaaagttatt 33818108  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33818109 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 33818176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 33877478 - 33877644
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||| ||||||||| |||||  |||||| ||| ||||        |||||||||||||||    
T  33877478 cggtctaaaagctattttaaaacaaagttaaaataaagctcttt-aagaaaaagactaaagttgtttgatttttttattttttttagttctaaagttatt 33877576  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33877577 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 33877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 46588007 - 46588173
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||| ||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||        |||||||||||||||    
T  46588007 cggtctaaaagctactctaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttattttttttagttctaaagttatt 46588105  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  46588106 tttgagttaaaagctgtttggcaaaatattatataaaactttgaatttattattttttggtggtgtct 46588173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 33895131 - 33895299
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  33895131 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaagattaaagctgtttggtttctttattttttttttagttctaaagtta 33895229  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33895230 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 33895299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 41901614 - 41901782
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  41901614 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaagactaaagctgtttggtttctttattttttttttagttctaaagtta 41901712  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  41901713 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtagtgtct 41901782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 38802464 - 38802300
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         |||||||||||||||    
T  38802464 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatt 38802366  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  38802365 tttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgt 38802300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 9575021 - 9574854
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| |||||  |||||||||||||||         ||||||||||||||    
T  9575021 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagttgtttggtttctttatttttttttagttctaaagttat 9574923  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  9574922 ttttgagttaaaagctgttcggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 9574854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 25659724 - 25659892
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||| ||||          |||||||||||||    
T  25659724 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttatttattttatttttagttctaaagtta 25659822  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25659823 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 25659892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 43120693 - 43120861
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnna--gttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||           ||||||||||||    
T  43120693 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttttgttctaaagtta 43120791  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43120792 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 43120861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 3265276 - 3265109
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||| ||||||||| |||||||| || ||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  3265276 cggtctaaaagctactctaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 3265178  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  3265177 ttttgagttaaaagctgtttggcaaaatattgtataaaactttgaatttattattttttggtggtgtct 3265109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 33642770 - 33642603
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctt-tannnnnnnnagttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||| || |         ||||||||||||||    
T  33642770 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggttttttattttttttttagttctaaagttat 33642672  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33642671 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 33642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 45104337 - 45104173
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| ||||||| ||||||| |||||||| |||||||| |||||||||  ||||  |||||||||||||||         |||||||||||||||||    
T  45104337 tctaaaagctacttttaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagttgtttggtttctttatttttttttagttctaaagttatttt 45104239  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45104238 tgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 45104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 47037045 - 47037213
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| ||||  ||||||||||||  |||| ||||||| ||||||||           ||||||||||||    
T  47037045 cggtctaaaagctactttaaaacaaagttaaaataaagct--tttaagaaaaaggttaaagctgtttgatttctttatttttttttttagttctaaagtt 47037142  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  47037143 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggcgtct 47037213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 207
Target Start/End: Original strand, 14487239 - 14487402
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||| ||||| ||||||||||| ||| |||||||| |||||||| ||||||||| ||||| ||||||||||| ||||         ||||||||||||||    
T  14487239 cggtttaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttttttatttttttttagttctaaagttat 14487337  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggt 207  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  14487338 ttttgagttaaaagctgtttggaaaaatattgtacaaaactttgaatttattattttttggtggt 14487402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 36165435 - 36165603
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtta 141  Q
    ||||||||| ||| ||||||| ||| |||||||| |||| ||||||||||||| |||||  |||||||||||||||           |||||||||||||    
T  36165435 ggtctaaaagctattttaaaataaagttaaaataaagct-ttttaagaaaaaggctaaagttgtttggtttctttatttttttttttagttctaaagtta 36165533  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36165534 tttttgagttaaaagctttttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 36165603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 40432113 - 40432285
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaa---a 137  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||           | ||||||   |    
T  40432113 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttttaattctaataaa 40432211  T
Q  138 gttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40432212 gttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 40432285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 33894008 - 33894169
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||       ||||||||||||||||          |||||||||||||    
T  33894008 cggtctaaaatctactttaaaacaaagttaaaataaagctcttt-aagaaaaag-------ctgtttggtttctttaatttttttttagttctaaagtta 33894099  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  33894100 tttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttattattttttggtggtgtct 33894169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 39729120 - 39729262
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||||||||        | |||||||||||||    
T  39729120 cggtctaaaagctactttaaaacaaaattaaaataaagctctttaaagaaaaagt-taaagctgtttggtttctttattttttttaattctaaagttatt 39729218  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttga 187  Q
    ||| ||||||||| ||||| ||||||||||||||||||||||||    
T  39729219 tttaagttaaaagttgtttcacaaaatattgtacaaaactttga 39729262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 17249195 - 17249027
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||| ||||| ||||||||||||||| |||||||| ||| |||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  17249195 cggtgtaaaagctactttaaaacaaagttaaaataaagcccttt-aagaaaaaggctaaagctgtttggtttctttattttttttcagttctaaagttat 17249097  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtct 211  Q
    |||| || ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  17249096 ttttaagctaaaagctgtttggcaaaatattgtacaaaactttgattttattatttttttggtggtgtct 17249027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 43123193 - 43123042
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttga 148  Q
    ||||| ||||||||||||||| |||||||| ||| |||| || |||||| | ||| ||||||||||||||||        |||||||||||||||||| |    
T  43123193 taaaagctactttaaaacaaagttaaaataaagccctttaaaaaaaaaggcaaaagctgtttggtttctttattttttttagttctaaagttatttttaa 43123094  T
Q  149 gttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  43123093 gttaaaagctgtttggcaaaatattgtacaaaactttgaattt-ttatttttt 43123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 201
Target Start/End: Original strand, 43119032 - 43119186
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| |||||||||||||||||||||||| | |||||| |  ||||||| |||| ||||||||||||||||         |||||||||||||||||    
T  43119032 tctaaaagctactttaaaacaaaattaaaataaaactctttaagaaaaaagt-taaaactgtttggtttctttaattttttttagttctaaagttatttt 43119130  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    | ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  43119131 taagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 43119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 33831925 - 33832007
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  33831925 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaacactttgaatttattattttttggtggtgtct 33832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 24473465 - 24473623
Alignment:
Q  44 cggtctaaaaactactttaaaacaaa---attaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagtt 140  Q
    ||||||||||||||||||||||||||   |||| |||| || ||||| | |||||||| |||| ||||||||||||||||        ||||||||||||    
T  24473465 cggtctaaaaactactttaaaacaaagttattataataaagttctttaaggaaaaagt-taaagctgtttggtttctttattttttt-agttctaaagtt 24473562  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  24473563 atttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 24473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 36952630 - 36952796
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnna-gttctaaagttattt 144  Q
    |||||||| ||||||||||||||| |||||||| || ||||| |||||||||| ||||  |||||||||||||||          |||||||| ||||||    
T  36952630 gtctaaaagctactttaaaacaaagttaaaataaagttctttaaagaaaaagt-taaagttgtttggtttctttattttttttttgttctaaatttattt 36952728  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    || ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36952729 ttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtct 36952796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 39879056 - 39879223
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaa-aaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttat 142  Q
    ||||||||||| |||||||||||||| |||||||| | |||||| ||||| ||||| |||| ||||||| ||||||||        ||||||||||||||    
T  39879056 cggtctaaaaattactttaaaacaaagttaaaataaaactcttt-aagaacaaagt-taaagctgtttgatttctttattttatttagttctaaagttat 39879153  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    |||| ||||||||| |||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  39879154 ttttaagttaaaagttgtttggcaaaatattttacaaaacattgaatttattatttttttggtggtgtct 39879223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 31638331 - 31638496
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||| ||| |||||||||||||||  ||||||| |||||||| | ||||||| ||||| ||||||||||||||||        || |||||  |||||    
T  31638331 cggtcttaaagctactttaaaacaaagataaaataaagctctttaaggaaaaag-ctaaagctgtttggtttctttattttttttagctctaactttatt 31638429  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    ||| ||||||||| |||||| ||||||||| |||||||||||||||| |||||||||| ||||||||    
T  31638430 tttaagttaaaagttgtttggcaaaatattatacaaaactttgaattaattatttttttgtggtgtc 31638496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 201
Target Start/End: Complemental strand, 34652431 - 34652277
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttattt 144  Q
    |||||||||||||||||||||||| |||||||| || ||||| || ||| ||| |||||  ||||| ||||||||         |||| || ||||||||    
T  34652431 gtctaaaaactactttaaaacaaagttaaaataaagttctttaaaaaaatagt-taaacg-gtttgttttctttatttttttttagttatacagttattt 34652334  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || ||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34652333 ttaagttaaaagttgtttgacaaaatattgtacaaaattttgaatttattatttttt 34652277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 16097502 - 16097358
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagttat 142  Q
    |||||||| ||||||||||||||| |||||||| || || ||||||| |||| || || ||||||||||||||||           ||||||||| ||||    
T  16097502 gtctaaaagctactttaaaacaaagttaaaataaag-tcctttaagataaaggctgaagctgtttggtttctttatttttttttttagttctaaaattat 16097404  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaa 188  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  16097403 ttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaa 16097358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 31215782 - 31215907
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta-nnnnnnnnagttctaaagttatttt 145  Q
    ||||||| ||||||||||||||| |||||||| ||||| ||||||| |||| ||||| ||||||||||||||||         |||||||||||||||||    
T  31215782 tctaaaagctactttaaaacaaagttaaaataaagctc-tttaagacaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatttt 31215880  T
Q  146 tgagttaaaagctgtttgacaaaatat 172  Q
    ||||||||||| |||||| ||||||||    
T  31215881 tgagttaaaagttgtttggcaaaatat 31215907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 31221537 - 31221662
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta-nnnnnnnnagttctaaagttatttt 145  Q
    ||||||| ||||||||||||||| |||||||| ||||| ||||||| |||| ||||| ||||||||||||||||         |||||||||||||||||    
T  31221537 tctaaaagctactttaaaacaaagttaaaataaagctc-tttaagacaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatttt 31221635  T
Q  146 tgagttaaaagctgtttgacaaaatat 172  Q
    ||||||||||| |||||| ||||||||    
T  31221636 tgagttaaaagttgtttggcaaaatat 31221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 34078440 - 34078285
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| |||||||||||  || |||||||| ||||  |||||| ||||  |||||  |||||||||||||||        | |||||||||||||    
T  34078440 cggtctaaaagctactttaaaatgaagttaaaataaagct--tttaaggaaaaaactaaagttgtttggtttctttattttttttaattctaaagttatt 34078343  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| | ||||||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  34078342 tttaaattaaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 34078285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 46040486 - 46040568
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    |||| ||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  46040486 agttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaaaattttgaatttattatttttttggtggtgtc 46040568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 17366271 - 17366411
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| |||||||| | ||||||   ||||  |||||||||||||||        | |||||||||||||||    
T  17366271 gtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaaag-taaagttgtttggtttctttattttttttaattctaaagttatttt 17366369  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttga 187  Q
    | ||||||||| ||||||  ||||||||||||||||||||||    
T  17366370 taagttaaaagttgtttggtaaaatattgtacaaaactttga 17366411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 1322525 - 1322608
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  1322525 agttctaaagttatttttaaattaaaagttgtttggtaaaatattgtacaaaacattgaatttattatttttttggtggtgtct 1322608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 49571357 - 49571205
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| |||||||||||   | |||||||| |||||||| ||||||||  ||||| || |||||||||||||        |||||||||||||||    
T  49571357 cggtctaaaagctactttaaaa---agttaaaataaagctcttt-aagaaaaaaactaaagctatttggtttctttattttttttagttctaaagttatt 49571262  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttt 200  Q
    |||  |||| ||  ||||||||| |||||||||||||||||| ||||| || |||||    
T  49571261 tttatgttataatttgtttgacacaatattgtacaaaactttaaatttttttttttt 49571205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 18091348 - 18091268
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||| ||||| ||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||  |||||||    
T  18091348 agttttaaagctatttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaatttattatttttttatggtgtc 18091268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 33933072 - 33932911
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| ||||||||||||||| |||||||| || ||||| | |||||||| ||||  |||||||||||||||         | |||||||||||||||    
T  33933072 tctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaagt-taaagttgtttggtttctttattattttttaattctaaagttatttt 33932974  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    | | ||||||| |||||| ||||||||  ||||||||||| ||||| || |||||| |||||||    
T  33932973 taaattaaaagttgtttggcaaaatatcatacaaaacttt-aattttttttttttttgtggtgt 33932911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 23730210 - 23730376
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttct-aaagtta 141  Q
    |||||||||| |||||||||| |||| |||||||| |||||||| | ||| ||| |||||  |||||||||||||||         |||| | |||||||    
T  23730210 cggtctaaaagctactttaaa-caaagttaaaataaagctctttaaggaataag-ctaaagttgtttggtttctttattgttttttagttttgaaagtta 23730307  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatt-attttttggtggtgtc 210  Q
    ||||| ||||||||| |||||| ||||||||||||| |||||||||| |||||  |||||||||||||||    
T  23730308 tttttaagttaaaagttgtttggcaaaatattgtac-aaactttgaaattattgcttttttggtggtgtc 23730376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 7308288 - 7308404
Alignment:
Q  86 tttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaa-ctt 184  Q
    |||||||||||   |||| ||||||||||||||||        |||||||| ||||||||| ||||||||| |||||| |||||||||||||||||  ||    
T  7308288 tttaagaaaaaagataaagctgtttggtttctttattttttttagttctaatgttatttttaagttaaaagttgtttggcaaaatattgtacaaaatttt 7308387  T
Q  185 tgaatttattatttttt 201  Q
    ||||||| || ||||||    
T  7308388 tgaattttttttttttt 7308404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 45589773 - 45589664
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    ||||||||  |||||||||||||| |||||||| ||| | |||||| ||||  ||||| ||||||||||||||||        |||||||||||||||||    
T  45589773 gtctaaaagttactttaaaacaaagttaaaataaagc-cctttaaggaaaaaactaaagctgtttggtttctttattttttttagttctaaagttatttt 45589675  T
Q  146 tgagttaaaag 156  Q
    | |||||||||    
T  45589674 taagttaaaag 45589664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 11606467 - 11606534
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat 196  Q
    |||| ||||| ||||| | | ||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  11606467 agttttaaagctatttctaaattaaaagttgtttggcaaaatattgtacaaaactttaaatttattat 11606534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 33831845 - 33831897
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaag 97  Q
    |||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||    
T  33831845 cggtctaaaatctactttaaaacaaagttaaaataaagctc-tttaagaaaaag 33831897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 49223219 - 49223163
Alignment:
Q  134 taaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||| |||||||||||||    
T  49223219 taaagctatttttaagttaaatgttgtttgacaaaatattgtac-aaactttgaattt 49223163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 44819821 - 44819891
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctt 118  Q
    |||||||| ||||||||||||||| |||||||| || |  ||||||||||||| |||| ||||||||||||||    
T  44819821 gtctaaaagctactttaaaacaaagttaaaataaaggt-atttaagaaaaagt-taaaactgtttggtttctt 44819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 17313456 - 17313621
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  17313456 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 17313554  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17313555 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 17313621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 17045924 - 17046092
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||          |||||||||||||    
T  17045924 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggccaaagctgtttggtttctttattttttttttagttctaaagtta 17046022  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17046023 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 17046092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 39685581 - 39685414
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||| ||||||| ||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  39685581 cggtctaaaagctattttaaaataaagttaaaataaagctcttt-aagaaaaagactaaagctgtttggtttctttatttttttttagttctaaagttat 39685483  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39685482 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 39685414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 43817879 - 43818046
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  || | ||||||||||||||||         ||||||||||||||    
T  43817879 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttatagctgtttggtttctttatttttttgtagttctaaagttat 43817977  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43817978 ttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttattattttttggtggtgtct 43818046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 7219537 - 7219370
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||         ||||||||||||||    
T  7219537 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttat 7219439  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  7219438 ttttgagttaaaagttgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtct 7219370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 14719025 - 14718858
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||| ||| |||||||| |||||||| ||||||||| ||||| || |||||||||||||         ||||||||||||||    
T  14719025 cggtctaaaagctactttaaaataaagttaaaataaagctcttt-aagaaaaaggctaaagctatttggtttctttatttttttttagttctaaagttat 14718927  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  14718926 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattattttttggtggtgtct 14718858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 27467872 - 27467703
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||           ||||||||||||    
T  27467872 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttttagttctaaagtt 27467774  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  27467773 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatttttttttggtggtgtct 27467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 34805949 - 34805780
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||           ||||||||| ||    
T  34805949 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttttagttctaaaatt 34805851  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34805850 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 34805780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 41361148 - 41360981
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||         ||| ||||||||||    
T  41361148 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggccaaagctgtttggtttctttatttttttttagtactaaagttat 41361050  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  41361049 ttttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 41360981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 16239083 - 16239250
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||| ||||  |||| ||||||||||||||||         ||||||||||||||    
T  16239083 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagataaaggttaaagctgtttggtttctttatttttttgtagttctaaagttat 16239181  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||    
T  16239182 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttatagtggtgtct 16239250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 36216492 - 36216658
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| |||||||||||| || ||||| || |||| || ||||  |||||||||||||||        |||||||||||||||    
T  36216492 cggtctaaaagctactttaaaaaaaaattaaaataaagttctttaaaaaaaaggt-taaagttgtttggtttctttattttttttagttctaaagttatt 36216590  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  36216591 tttgagttaaaagttgtttggcaaaatattatacaaaactttgaatttattatttttttgtggtgtct 36216658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 44908649 - 44908488
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| |     ||||||||||         ||||||||||||||    
T  44908649 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagc-----ggtttctttatttttttttagttctaaagttat 44908556  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44908555 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttgtggtgtc 44908488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 169620 - 169786
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||| ||| |||||||| ||  |||| || |||||| ||||| ||||||||||||||||        |||||||||||||||    
T  169620 cggtctaaaagctactttaaaataaagttaaaataaagtcctttaaaaaaaaaggctaaagctgtttggtttctttatttcttttagttctaaagttatt 169719  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  169720 tttaagttaaaaactgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 169786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 11924926 - 11924758
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| | | |||| ||||||||  ||||| ||||||||||| ||||         ||||||||||||||    
T  11924926 cggtctaaaagctactttaaaacaaagttaaaataaaacccttt-aagaaaaaagctaaagctgtttggtttttttattttttttcagttctaaagttat 11924828  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttt-ttggtggtgtct 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11924827 ttttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttcttggtggtgtct 11924758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 16845186 - 16845019
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| ||||||||| ||||| ||||||| ||||||||         ||||||||||||||    
T  16845186 cggtctaaaagctactttaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagctgtttgatttctttatttttttttagttctaaagttat 16845088  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| || |||||    
T  16845087 ttttgaattaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttgctgatgtct 16845019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 36059192 - 36059358
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||| ||||| ||||||||||||||| || ||||| || ||||| |||||||||| ||||  |||||||||||||||        |||||||||||||||    
T  36059192 cggtataaaagctactttaaaacaaagttcaaataaagttctttaaagaaaaagt-taaagttgtttggtttctttattttatttagttctaaagttatt 36059290  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  36059291 tttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 36059358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 44602854 - 44603017
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||  |  ||||| |||||  |||||||||||||||         ||||||||||||||    
T  44602854 cggtctaaaaactattttaaaacaaagttaaaataaagctcttt--acgaaaaggctaaagttgtttggtttctttatttttttttagttctaaagttat 44602951  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  44602952 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttatta-tttttggtggtgt 44603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 6816189 - 6816024
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagttatt 143  Q
    ||||||| ||||||||||||||| |||||||| ||| |||| || |||||| ||||| ||||||| ||||||||           |||||||||||||||    
T  6816189 tctaaaagctactttaaaacaaagttaaaataaagccctttaaa-aaaaagactaaagctgtttgatttctttatttttttttttagttctaaagttatt 6816091  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgt 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6816090 tttaagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 6816024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 38139471 - 38139303
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | |||||||  ||||  |||||||||||||||          |||||||||||||    
T  38139471 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagg-taaagttgtttggtttctttattttatttttagttctaaagtta 38139373  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38139372 tttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 38139303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 11579350 - 11579194
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| | || ||| |||||||||| |||| ||||||||||||||||        |||||||||||||||    
T  11579350 cggtctaaaagctactttaaaacaaagttaaaataaacctttttaaagaaaaagt-taaagctgtttggtttctttattttttttagttctaaagttatt 11579252  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| ||||||  |||||||||||||||| ||||||||| |||||||||    
T  11579251 tttaagttaaaagttgtttggtaaaatattgtacaaaaatttgaatttgttatttttt 11579194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 37034984 - 37034816
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||||||||  |||||||||||||| |||||||| |||||||| | ||||||| |||||  | |||||||||||||          |||||||||||||    
T  37034984 cggtctaaaatttactttaaaacaaagttaaaatatagctctttaaggaaaaag-ctaaagttatttggtttctttattttaattttagttctaaagtta 37034886  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  37034885 tttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 37034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 208
Target Start/End: Original strand, 39485942 - 39486108
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||  ||||||||||||||| |||||||| |||||||| | |||||||| |||| ||||||| ||||||||          ||||||| |||||    
T  39485942 cggtctaaaggctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttgttttctttattttttttttagttctacagtta 39486040  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtg 208  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  39486041 tttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattattattttggtggtg 39486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 2184410 - 2184492
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2184410 agttctaaagttattttaaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattattttttggtggtgtct 2184492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 12261387 - 12261532
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||||||||||||||| ||| |||||||| || ||||| | |||||||| |||| ||||||||||||||||        |||| ||||||||||||    
T  12261387 gtctaaaaactactttaaaataaagttaaaataaagttctttaaggaaaaagt-taaagctgtttggtttctttattttttttagttttaaagttatttt 12261485  T
Q  146 tgagttaaaa-gctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    | |||||||| | ||||||||||||||||||||||||||||||||||    
T  12261486 taagttaaaaagttgtttgacaaaatattgtacaaaactttgaattt 12261532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 26518714 - 26518878
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||| ||||||||||| ||| |||| ||| |||||||| ||||||||| |||||  |||||||| ||||||         ||||||||| |||||||    
T  26518714 tctaaaagctactttaaaataaagttaagataaagctcttt-aagaaaaaggctaaagttgtttggtgtctttatttttttttagttctaaa-ttatttt 26518811  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26518812 taagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtct 26518878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 38137634 - 38137791
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| | |||||||  ||||  |||||||||||||||         | ||||||||||||    
T  38137634 cggtctaaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaagg-taaagttgtttggtttctttatttatttttaattctaaagttat 38137732  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  38137733 ttttaagttaaaagttgtttgataaaatattgtacaaaactttgaatttattatttttt 38137791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 197
Target Start/End: Complemental strand, 39525610 - 39525458
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||| | |  ||||||| ||||  |||||||||||||||        |||||||||||||||    
T  39525610 cggtctaaaagctactttaaaacaaagttaaaataaagctctataagaaaaaagt-taaagttgtttggtttctttattttttttagttctaaagttatt 39525512  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt 197  Q
    ||| | ||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  39525511 tttaatttaaaagttgtttggcaaaatattgtgcaaaactttgaatttattatt 39525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 41526467 - 41526324
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    ||||||| || ||||||||||||||| |||||||| |||||||| ||||||||  |||||  |||||||||||||||        |||||||||||||||    
T  41526467 cggtctagaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaaactaaagttgtttggtttctttattttttttagttctaaagttatt 41526369  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaa 188  Q
    ||| ||||||||| |||||  ||||||||||||||||||||||||    
T  41526368 tttaagttaaaagttgtttagcaaaatattgtacaaaactttgaa 41526324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 45138971 - 45139122
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttga 148  Q
    ||||| ||||||||||||||| |||||||| |||||||| | |||||||| |||| ||||||||||||||||        |||| ||||||||||||| |    
T  45138971 taaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttggtttctttattttttttagttttaaagttatttttaa 45139069  T
Q  149 gttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||| |||| | ||||||||||||||||| ||||| ||| || ||||||    
T  45139070 gttaaaagttgttcggcaaaatattgtacaaaattttgatttttttttttttt 45139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 210
Target Start/End: Complemental strand, 34997681 - 34997523
Alignment:
Q  51 aaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagt 150  Q
    ||||||||||||||||||| |||||||| | | |||| || |||||  |||||  |||||||||||||||        ||||||| |||||||||| |||    
T  34997681 aaaactactttaaaacaaagttaaaataaatccctttaaataaaaaa-ctaaagttgtttggtttctttattttttttagttctatagttatttttaagt 34997583  T
Q  151 taaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||| |||||| ||||||||||||||||| |  |||||||||||||||| ||||||||    
T  34997582 taaaagttgtttggcaaaatattgtacaaaattaggaatttattatttttttgtggtgtc 34997523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 39998134 - 39997991
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||||||||  |||||||||||||| |||||||| |||||| | ||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  39998134 cggtctaaaagatactttaaaacaaagttaaaataaagctctat-aagaaaaaggctaaagctgtttggtttctttattttttttttagttctaaagtta 39998036  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttg 186  Q
    ||||||||||||||| |||||  ||||| ||||||||||||||||    
T  39998035 tttttgagttaaaagttgtttagcaaaaaattgtacaaaactttg 39997991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 55 - 210
Target Start/End: Original strand, 1877506 - 1877659
Alignment:
Q  55 ctactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaa 154  Q
    ||||||||||| |||  ||||||| |||||||| || |||| ||  |||  |||||||||||||||        |||||||| ||||||||| |||||||    
T  1877506 ctactttaaaataaagataaaataaagctctttaaaaaaaaggt--aaagttgtttggtttctttattttttttagttctaacgttatttttaagttaaa 1877603  T
Q  155 agctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |  |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  1877604 aattgtttggcaaaatattgtacaaaactttgaatttattatttttttgtgctgtc 1877659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 38909360 - 38909288
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  38909360 agttctaaagttatttttaagttaaaagttgcttgacaaaatattgtacaaaattttgaatttattatttttt 38909288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 44655224 - 44655059
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||| ||| |||||||||||||||  ||||||| |||||||| | ||||||| ||||| ||||||| ||||||||        || |||||  |||||    
T  44655224 cggtcttaaagctactttaaaacaaagataaaataaagctctttaaggaaaaag-ctaaagctgtttgatttctttattttttttagctctaactttatt 44655126  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    ||| ||| ||||| |||||| |||||| || |||||||||||||||| |||||||||| ||||||||    
T  44655125 tttaagtcaaaagttgtttggcaaaattttatacaaaactttgaattaattatttttttgtggtgtc 44655059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 2190647 - 2190728
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2190647 agttctaaaattattttgaagttaaaagctgtttggcaaaatattgtacaaaactttaaatttattatttttttggtggtgt 2190728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 42984142 - 42984002
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||||||||||||||||||| || ||||| |||||||| | ||||||| ||||| ||||||||||| |||         |||||||||||||||||    
T  42984142 gtctaaaaactactttaaaacaaagttgaaataaagctctttaaggaaaaag-ctaaaactgtttggttttttt----tttttagttctaaagttatttt 42984048  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    | ||||||||| ||||||  ||||||||||||||||| || |||||    
T  42984047 taagttaaaagttgtttggaaaaatattgtacaaaacatttaattt 42984002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 42844352 - 42844281
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||    
T  42844352 agttctaaagttatttttaagttaaaagttgtttggcaaaatattgtac-aaactttaaatttattatttttt 42844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 14449524 - 14449667
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagt--ctaaacctgtttggtttctttannnnnnnnagttctaaagtta 141  Q
    ||||||||||  |||||||||||||| |||||||| |||| ||| | ||||||    |||||  | |||||||||||||        |||||||||||||    
T  14449524 cggtctaaaagttactttaaaacaaagttaaaataaagctatttaaggaaaaaaaaactaaagttatttggtttctttattttttttagttctaaagtta 14449623  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaacttt 185  Q
    |||||  |||||||| ||||| ||||||||||||||||||||||    
T  14449624 tttttatgttaaaagttgtttaacaaaatattgtacaaaacttt 14449667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 1922432 - 1922389
Alignment:
Q  159 gtttgacaaaatattgtacaaaactttgaatttattattttttg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1922432 gtttgacaaaatattgtacaaaactttgaatttattattttttg 1922389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 15310470 - 15310398
Alignment:
Q  129 agttctaaagttatttttgagttaaaagct-gtttgacaaaatattgtacaaaactttgaatttattattttt 200  Q
    ||||||||| |||||||| ||||||||| | ||||| |||||||||||| |||||||||||||| ||||||||    
T  15310470 agttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaatttcttattttt 15310398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 15490839 - 15490767
Alignment:
Q  129 agttctaaagttatttttgagttaaaagct-gtttgacaaaatattgtacaaaactttgaatttattattttt 200  Q
    ||||||||| |||||||| ||||||||| | ||||| |||||||||||| |||||||||||||| ||||||||    
T  15490839 agttctaaatttatttttaagttaaaagtttgtttggcaaaatattgtagaaaactttgaatttcttattttt 15490767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 9275901 - 9275854
Alignment:
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaat 189  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  9275901 tttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaat 9275854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 27878040 - 27877985
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  27878040 agttttaaagttagttttaagttaaaagttgtttgacaaaatattgtacaaaactt 27877985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 28018221 - 28018166
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  28018221 agttttaaagttagttttaagttaaaagttgtttgacaaaatattgtacaaaactt 28018166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 34325935 - 34325869
Alignment:
Q  130 gttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat 196  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  34325935 gttctaaggttattcttaagttaaaagttgtttgacaaaatattgtaaaaaattttaaatttattat 34325869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 27914984 - 27914929
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| |||||||| |||| ||||||||| |||||| ||||||||||||||||||||    
T  27914984 agttttaaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 27961403 - 27961348
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| |||||||| |||| ||||||||| |||||| ||||||||||||||||||||    
T  27961403 agttttaaagttacttttaagttaaaagttgtttggcaaaatattgtacaaaactt 27961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 30550984 - 30551026
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  30550984 tgtttgacaaaatattgtac-aaactttgaatttattatttttt 30551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 44215733 - 44215775
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  44215733 tgtttgacaaaatattgtac-aaactttgaatttattatttttt 44215775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 39140716 - 39140852
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    ||||||||  |||||||||||||| |||||||| || || |||||||||||   |||| |||||||||||||| |        |||| ||||  || |||    
T  39140716 gtctaaaagttactttaaaacaaagttaaaataaagttc-tttaagaaaaaagttaaagctgtttggtttcttaattttttttagttttaaaactaattt 39140814  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaact 183  Q
    | ||||||||| |||||  |||||||||||||||||||    
T  39140815 taagttaaaagttgtttagcaaaatattgtacaaaact 39140852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 20665621 - 20665663
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  20665621 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 20665663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 27748908 - 27748853
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| ||||||||||||| ||||||||| |||||| ||||||||| | ||||||||    
T  27748908 agttttaaagttatttttaagttaaaagttgtttggcaaaatattatgcaaaactt 27748853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 39201574 - 39201524
Alignment:
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttt 199  Q
    ||||||| | |||||| ||||||||||||||||| |||||||||||||||||    
T  39201574 agttaaatgttgtttggcaaaatattgtacaaaa-tttgaatttattatttt 39201524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 33848722 - 33848772
Alignment:
Q  160 tttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||| ||||||||||||||||||||||||||| || |||| | ||||||||    
T  33848722 tttggcaaaatattgtacaaaactttgaatttttttttttgttgtggtgtc 33848772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 33848634 - 33848698
Alignment:
Q  55 ctactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    ||||||||||||||| |||||||| ||||| || | | |||||| |||| ||||||||||||||||    
T  33848634 ctactttaaaacaaagttaaaataaagctccttaagggaaaagt-taaagctgtttggtttcttta 33848698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 35004412 - 35004340
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    ||||||||||||||||||||||| |||||||| || | ||| | |||||||  ||||  |||||||||||||||    
T  35004412 tctaaaaactactttaaaacaaagttaaaataaagttatttaaggaaaaag-gtaaagttgtttggtttcttta 35004340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 35916579 - 35916640
Alignment:
Q  150 ttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||| |||||| |||||||||||||||||  ||| |||| || |||||| |||||||||    
T  35916579 ttaaaagttgtttggcaaaatattgtacaaaatattggattttttttttttttgtggtgtct 35916640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 40048678 - 40048739
Alignment:
Q  131 ttctaaagttatttttgagttaaaagctg-tttgacaaaatattgtacaaaactttgaattt 191  Q
    |||||||||||||||| ||||||||| || |||  || |||||||| |||||||||||||||    
T  40048678 ttctaaagttatttttaagttaaaagttgtttttgcagaatattgtccaaaactttgaattt 40048739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 1921831 - 1921795
Alignment:
Q  165 caaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  1921831 caaaatattatacacaactttgaatttattatttttt 1921795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 2475189 - 2475356
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||||||||||||||| |||||||| || ||||| ||||||||| ||||| || |||||||||||||         ||||||||||||||    
T  2475189 cggtctaaaaactactttaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagctatttggtttctttatttttttttagttctaaagttat 2475287  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2475288 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 2475356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 24759138 - 24758972
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         |||||||||||||||    
T  24759138 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatt 24759040  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  24759039 tttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 24758972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 24027775 - 24027942
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||         || |||||||||||    
T  24027775 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttatttttttttagctctaaagttat 24027873  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24027874 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 24027942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 3297740 - 3297907
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         | ||||||||||||    
T  3297740 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttgtaattctaaagttat 3297838  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3297839 ttttgagttaaaagctgtttggcaaaataatgtataaaactttgaatttattattttttggtggtgtct 3297907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 16050689 - 16050856
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||| ||||||||||| |||||||| || ||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  16050689 cggtctaaaagctattttaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 16050787  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16050788 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaaattattattttttggtggtgtct 16050856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 32261632 - 32261797
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| | ||||||| |||||  |||||||||||||||         |||||||||||||||    
T  32261632 ggtctaaaagctactttaaaacaaagttaaaataaagctctttca-gaaaaaggctaaat-tgtttggtttctttatttttttttagttctaaagttatt 32261729  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32261730 tttgagttaaaagctgtttgataaaatattgtacaaaactttgaatttattattttttggtggtgtct 32261797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 5589382 - 5589549
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| ||||| || |||||||| ||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  5589382 cggtctaaaagctactttaaaacaaagttaaa-taaagctcttt-aagaaaaaggctaaagctgtttggtttctttattttttttttagttctaaagtta 5589479  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  5589480 tttttgagttaaaagctgtttgacaaaatattgtacaaaattttgaatttatcattttttggtggtgtct 5589549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 31884580 - 31884745
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||| ||| |||||||| | |||| | ||||||||| ||||| ||||||||||||||||         ||||||||||||||    
T  31884580 cggtctaaaagctactttaaaataaagttaaaataaaactctat-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttat 31884678  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31884679 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 31884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 31939749 - 31939917
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| ||||||||| |||||  |||||||||||||||          |||||||||||||    
T  31939749 cggtctaaaagctactttaaaacaaagttaaaataaagttcttt-aagaaaaaggctaaagttgtttggtttctttattttttttttagttctaaagtta 31939847  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31939848 tttttgagttaaaagcagtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 31939917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 665476 - 665642
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| |||||  |||||||||||||||          |||||||||||||    
T  665476 cggtctaaaagctactttaaaacaaatttaaaataaagctcttt-aagaaaaagactaaagttgtttggtttctttattttttttttagttctaaagtta 665574  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  665575 tttttgagttaaaagctgttcggcaaaatattatacaaaactttgaatttattattttttggtggtgt 665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 25821377 - 25821231
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttt 145  Q
    |||||||| ||||||||||||||| |||||||| |||||||| ||||||||| |||||  |||||||||||||||        |||||||||||||||||    
T  25821377 gtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagttgtttggtttctttattttttttagttctaaagttatttt 25821279  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttat 193  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  25821278 tgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttat 25821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 4374769 - 4374939
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||            |||||||||||    
T  4374769 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttttagttctaaagt 4374867  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  4374868 tatttttgagttaaaagttgtttggcaagatattgtacaaaactttgaatttattattttttggtggtgtct 4374939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 26379374 - 26379204
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    ||||||| || ||||||||||||||| |||||||| |||||| | ||||||||| ||||| ||||||||||||||||            |||||||||||    
T  26379374 cggtctacaagctactttaaaacaaagttaaaataaagctctct-aagaaaaaggctaaagctgtttggtttctttatttttttttttaagttctaaagt 26379276  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  26379275 tatttttgagttaaaagctgtttggcaaaatattgtacaaaattttgaatttattattttttggtggtgtct 26379204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 42110843 - 42110679
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttattt 144  Q
    ||||||| ||||||||||| ||| |||||||| || ||||| ||||||||| ||||| ||||||||||||||||          ||||||||||||||||    
T  42110843 tctaaaagctactttaaaataaagttaaaataaagttcttt-aagaaaaaggctaaagctgtttggtttctttattttttttttagttctaaagttattt 42110745  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42110744 ttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtc 42110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 27176393 - 27176559
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttattt 144  Q
    ||||||||  || ||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         ||||||||||||||||    
T  27176393 gtctaaaaggtattttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttattt 27176491  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27176492 ttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtct 27176559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 42323031 - 42322866
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttattt 144  Q
    |||||||| ||||||||||||||| |||||||| |||||||| | ||||||| |||||  |||||||||||||||         ||||||||||||||||    
T  42323031 gtctaaaagctactttaaaacaaagttaaaataaagctctttga-gaaaaaggctaaagttgtttggtttctttatttgtttttagttctaaagttattt 42322933  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||    
T  42322932 ttgagttaaaagctgtttcgtaaaatattgtacaaaactttgaatttattattttttgatggtgtct 42322866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 29383642 - 29383810
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| ||||||||| |||||  |||||||||||||||         ||||||| ||||||    
T  29383642 cggtctaaaagctactttaaaacaaagttaaaataaaggtcttt-aagaaaaaggctaaagttgtttggtttctttatttttttttagttctatagttat 29383740  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  29383741 ttttgagttaaaagctgtttgacaaaacattgtaaaaaactttgaatttattatttttttggtggtgtct 29383810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 29874584 - 29874750
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| | |||||| || ||||| ||||||||  ||||| ||||||||||||||||        ||||||| |||||||    
T  29874584 cggtctaaaagctactttaaaacaaagtaaaaataaagttcttt-aagaaaaaagctaaagctgtttggtttctttattttttttagttctatagttatt 29874682  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    ||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  29874683 tttaagttaaaagttgtttgacaaaatattatacaaaactttgaatttattatttttttggtggtgtc 29874750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 6928360 - 6928442
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6928360 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 6928442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 2530242 - 2530075
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttat 142  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| | |||||||| ||||  |||||||||||||||          ||||||||||||||    
T  2530242 ggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaaattgtttggtttctttatttttttttcagttctaaagttat 2530144  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2530143 ttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 2530075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 210
Target Start/End: Complemental strand, 19361799 - 19361641
Alignment:
Q  51 aaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagt 150  Q
    ||||||||||||||||||  |||||||| |||||||| | ||||||| ||||| ||||||||||||||||        |||||||||||||||||| |||    
T  19361799 aaaactactttaaaacaaggttaaaataaagctctttaaggaaaaag-ctaaagctgtttggtttctttattttttttagttctaaagttatttttaagt 19361701  T
Q  151 taaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||| |||||| ||||||||||||||||||||||| ||| || |||||||||| ||||    
T  19361700 taaaagttgtttggcaaaatattgtacaaaactttgattttttttttttttggtgatgtc 19361641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 789977 - 790142
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    ||||||||||  |||||||||||||| |||||||| |||||||| |  ||||||| |||| || |||||||||||||        |||||||||||||||    
T  789977 cggtctaaaaggtactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaaactatttggtttctttattttttttagttctaaagttatt 790075  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||| ||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  790076 tttaagttaaaagttgtttgaaaaaatattgtacaaaactatgaatttattatttttttggtggtgt 790142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 201
Target Start/End: Original strand, 28746235 - 28746390
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    |||||||||  |||||||||||||| |||||||| |||||||| | |||||||  |||| ||||||| ||||||||        ||||||||||||||||    
T  28746235 ggtctaaaagttactttaaaacaaagttaaaataaagctctttaaggaaaaagg-taaaactgtttgatttctttattttttttagttctaaagttattt 28746333  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  28746334 ttaagttaaaagttgtttggcaaaatattgtataaaactttgaatttattatttttt 28746390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 10042954 - 10042782
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnna------gttctaaa 137  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | |||||||| |||| ||||||||||||||||               ||||| ||    
T  10042954 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctgtttggtttctttattttattttatttttgttctgaa 10042856  T
Q  138 gttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10042855 gttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 10042782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 40506719 - 40506884
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    ||||||||| ||| ||||||||||| |||||||| | ||||||   |||||||| ||||  |||||||||||||||        | |||| |||||||||    
T  40506719 ggtctaaaagctattttaaaacaaagttaaaataaaactctttatggaaaaagt-taaagttgtttggtttctttattttttttaattcttaagttattt 40506817  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40506818 ttaagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 40506884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 197
Target Start/End: Original strand, 42111726 - 42111877
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattt 144  Q
    ||||||||| ||||||||||||||| |||||||| || ||||| | |||||||| |||| ||||||| ||||||||        |||| ||||||||||     
T  42111726 ggtctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaagt-taaaactgtttgatttctttattttttttagttataaagttattg 42111824  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt 197  Q
    || ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  42111825 ttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatt 42111877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 3246985 - 3246819
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    ||||||||| ||||||||||||||| |||||||| | |||||| | |||||||| |||| ||||||||||||||||         |||||||||||||||    
T  3246985 ggtctaaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaagt-taaagctgtttggtttctttatttttttttagttctaaagttatt 3246887  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||| ||||| ||| |||||| |||||||||||||||||| || ||||||||||| |||||||||||||    
T  3246886 tttaagttacaagttgtttggcaaaatattgtacaaaacattaaatttattatttttttggtggtgtc 3246819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 205
Target Start/End: Complemental strand, 36083948 - 36083790
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttt 145  Q
    ||||||||||||||||||| ||| |||||||| ||| |||| ||||||| | ||||| ||||||||||||||||         |||||||||||||||||    
T  36083948 tctaaaaactactttaaaataaagttaaaataaagcccttt-aagaaaatggctaaagctgtttggtttctttatatttttttagttctaaagttatttt 36083850  T
Q  146 tgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtg 205  Q
    | || ||||||||||||| ||||||||||||||||||||||||||| || |||| |||||    
T  36083849 taagctaaaagctgtttggcaaaatattgtacaaaactttgaatttttttttttgtggtg 36083790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 788943 - 789108
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttattt 144  Q
    ||||||||  |||||||||||||| |||||||| |||||||| | |||||| | ||||  |||||||||||||||         ||||||||| ||||||    
T  788943 gtctaaaagttactttaaaacaaacttaaaataaagctctttaaggaaaaaat-taaagttgtttggtttctttatttttttttagttctaaaattattt 789041  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    || ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  789042 ttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 789108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 207
Target Start/End: Complemental strand, 15976640 - 15976476
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||||||||   ||||||||||||| |||||||| |||||||| || |||||| ||||| ||||||||||||||||          ||||||||| |||    
T  15976640 cggtctaaaagtcactttaaaacaaagttaaaataaagctctttaaa-aaaaaggctaaagctgtttggtttctttattttttttttagttctaaaatta 15976542  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggt 207  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| | || ||||||||||||    
T  15976541 tttttgagttaaaagctgtttggcaaaatattgtacaaatctttgaatctttttttttttggtggt 15976476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 36088736 - 36088567
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaa-aagtctaaacctgtttggtttctttannnnnnnn-agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| ||| |||| |||||| ||| |||||   ||||||||||||||         | |||||||||||    
T  36088736 cggtctaaaagctactttaaaacaaagttaaaataaagcccttt-aagaaagaaggctaaagtcgtttggtttctttatttttttttatttctaaagtta 36088638  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtct 211  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  36088637 tttttaagtaaaaagctgtttgacaaaatattgttcaaaactttgaatttattatttttttggtggtgtct 36088567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 197
Target Start/End: Complemental strand, 43396680 - 43396524
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    |||||||||||||||||||||||||| |||||||| |||||||| | ||||||| ||||| ||||||||||| |||             |||||||||||    
T  43396680 cggtctaaaaactactttaaaacaaagttaaaataaagctctttaaggaaaaag-ctaaagctgtttggttttttttttttttttctttagttctaaagt 43396582  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt 197  Q
    ||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  43396581 tatttttaagttagaagttgtttggcaaaatattgtacaaaactttgaatttattatt 43396524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 42416955 - 42416790
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnag-ttctaaagttattt 144  Q
    |||||||| ||||||||||||||| |||||||| ||| |||| |  ||||||| ||||  |||||||||||||||           ||||||||||||||    
T  42416955 gtctaaaagctactttaaaacaaagttaaaataaagccctttaagaaaaaagt-taaagttgtttggtttctttattttttttttattctaaagttattt 42416857  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    || ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  42416856 ttaagttaaaagttgtttcacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 42416790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 39803853 - 39803934
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  39803853 agttctaaagttatttttaagttaaacgttgtttggcaaaatattgtacaaaactttgaatttattattttttggttgtgtc 39803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 40308412 - 40308340
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40308412 agttctaaagttatttttaagttaaaagctgtttggcaaaatagtgtacaaaactttgaatttattatttttt 40308340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 37147223 - 37147067
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||| |  ||||||| || | ||||||||||||   |||| ||||||| ||||||||        |||||||||||||||    
T  37147223 cggtctaaaagctactttaaaacagacataaaataaagtt-ttttaagaaaaaagttaaagctgtttgttttctttattttttttagttctaaagttatt 37147125  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| |||||||||||||||||||| |||||| || ||||||    
T  37147124 tttaagttaaaagttgtttggcaaaatattgtacaaaacttcgaattttttttttttt 37147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 8314987 - 8314829
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | ||||||  |||||  |||||||||| ||||          ||||||||| |||    
T  8314987 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaaa-ctaaagttgtttggtttttttaatttttttttagttctaaaatta 8314889  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||| ||||||||| |||||  ||||||||| |||||||||||||||||||||||||||    
T  8314888 tttttaagttaaaagttgttttgcaaaatattatacaaaactttgaatttattatttttt 8314829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 7536800 - 7536645
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttattt 144  Q
    ||||||| ||||||||||||||| |||||||| || ||||| | ||||||| |||||  |||||||||||||||          ||||||||||||||||    
T  7536800 tctaaaagctactttaaaacaaagttaaaataaagttctttaaggaaaaag-ctaaagttgtttggtttctttattttttttttagttctaaagttattt 7536702  T
Q  145 ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    || ||||||||| |||||  |||||||||||||||||| |||||||| || ||||||    
T  7536701 ttaagttaaaagttgtttagcaaaatattgtacaaaacattgaattttttttttttt 7536645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 31958390 - 31958465
Alignment:
Q  135 aaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  31958390 aaagttatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaatttattacttttttggtggtgtc 31958465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 30503448 - 30503613
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttatt 143  Q
    |||||||| ||||||||||||||| |||||||| | |||||| |  ||||||| ||||  |||||||||||||||          |||||||||||||||    
T  30503448 gtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaagt-taaagttgtttggtttctttaatttttttttagttctaaagttatt 30503546  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||| ||||||||  | |||  ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  30503547 tttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttattatttttttggtggtgt 30503613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 30543791 - 30543956
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagttatt 143  Q
    |||||||| ||||||||||||||| |||||||| | |||||| |  ||||||| ||||  |||||||||||||||          |||||||||||||||    
T  30543791 gtctaaaagctactttaaaacaaagttaaaataaaactctttaagaaaaaagt-taaagttgtttggtttctttaatttttttttagttctaaagttatt 30543889  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    ||| ||||||||  | |||  ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  30543890 tttaagttaaaaattatttagcaaaatattgtacaaaattttaaatttattatttttttggtggtgt 30543956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 14205570 - 14205433
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta-nnnnnnnnagttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| ||||| |||||||||||   ||||  |||||||||||||||         ||||||||||||||    
T  14205570 cggtctaaaagctactttaaaacaaagttaaaataaagctc-tttaagaaaaaagttaaagttgtttggtttctttatttttttttagttctaaagttat 14205472  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaa 181  Q
    |||| | ||||||| |||||| ||||||||| |||||||    
T  14205471 ttttaatttaaaagttgtttggcaaaatattatacaaaa 14205433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 16166292 - 16166354
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  16166292 agttctaaaattatttttaagttaaaagttatttgacaaaatattgtacaaaactttgaattt 16166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 28990943 - 28991021
Alignment:
Q  134 taaagttatttttgagttaaaa-gctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||| ||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  28990943 taaagctattttttagttaaaaagttgtttggcaaaatattgtacaaaactttgaatttattattttatgatggtgtct 28991021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 19270977 - 19270905
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||| ||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||||||||||    
T  19270977 agttttaaagctatttttaagttaaaggttgtttggcaaaatattatacaaaactttgaatttattatttttt 19270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 1060768 - 1060706
Alignment:
Q  137 agttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttt 200  Q
    |||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  1060768 agttatttttaagttaaaaattgtttgacaaaatattgtac-aaactttgaatttattattttt 1060706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 29382576 - 29382659
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaa-ctttgaatttatta-ttttttggtggtgtc 210  Q
    |||||||||||||||||| ||||||||| |||||| |||||||| ||||||||  ||| ||||||||| |||||||||||||||    
T  29382576 agttctaaagttatttttaagttaaaagttgtttggcaaaatatagtacaaaatttttaaatttattatttttttggtggtgtc 29382659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 2001631 - 2001506
Alignment:
Q  58 ctttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagttaaaagc 157  Q
    |||||||||||| |||||||| || ||||||||||||||   ||||  ||||||||||| |||        |||| ||||||||||||| |||||||||     
T  2001631 ctttaaaacaaagttaaaataaag-tcttttaagaaaaaaattaaagttgtttggtttcgttattttttttagttttaaagttatttttaagttaaaagt 2001533  T
Q  158 tgtttgacaaaatattgtacaaaactt 184  Q
    ||||||  |||||| ||||||||||||    
T  2001532 tgtttggtaaaatactgtacaaaactt 2001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 3213231 - 3213300
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttt 199  Q
    |||| ||||| ||||||  ||||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  3213231 agttttaaagctattttaaagttaaatgttgtttgacaaaatattgtac-aaactttgaatttattatttt 3213300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 207
Target Start/End: Complemental strand, 39783116 - 39782952
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttct-aaagtta 141  Q
    |||| ||||| ||||||||||||||| |||||||| || ||||| | ||| |||| |||| ||||||||||||||||         |||| | |||||||    
T  39783116 cggtttaaaagctactttaaaacaaagttaaaataaagttctttaaggaataagt-taaagctgtttggtttctttattattttttagttttgaaagtta 39783018  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggt 207  Q
    ||||| ||||||||| |||||| |||||||||||| | |||||| || |||||| ||||||||||||    
T  39783017 tttttcagttaaaagttgtttggcaaaatattgta-acaactttaaacttattacttttttggtggt 39782952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 30503673 - 30503800
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta--nnnnnnnnagttctaaagtta 141  Q
    |||||||||| | ||||||||||||| |||||||| ||||| |||||||||||   |||| ||| ||||||||||||          |||||||||||||    
T  30503673 cggtctaaaagcaactttaaaacaaagttaaaataaagctc-tttaagaaaaaagttaaagctgattggtttctttattttttttttagttctaaagtta 30503771  T
Q  142 tttttgagttaaaagctgtttgacaaaat 170  Q
    ||||| ||||||||| |||||| ||||||    
T  30503772 tttttaagttaaaagttgtttggcaaaat 30503800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 30544016 - 30544143
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta--nnnnnnnnagttctaaagtta 141  Q
    |||||||||| | ||||||||||||| |||||||| ||||| |||||||||||   |||| ||| ||||||||||||          |||||||||||||    
T  30544016 cggtctaaaagcaactttaaaacaaagttaaaataaagctc-tttaagaaaaaagttaaagctgattggtttctttattttttttttagttctaaagtta 30544114  T
Q  142 tttttgagttaaaagctgtttgacaaaat 170  Q
    ||||| ||||||||| |||||| ||||||    
T  30544115 tttttaagttaaaagttgtttggcaaaat 30544143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 35380505 - 35380566
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatt 190  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||||| |||||||| |||||||    
T  35380505 agttctaaagttaattttaagttaaaagttgtttggcaaaatattatacaaaacattgaatt 35380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 14720252 - 14720185
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat 196  Q
    |||| ||||| ||||||| || || ||| ||||||  |||||||||||||||||||||||||||||||    
T  14720252 agttttaaagctatttttaagatagaagttgtttgggaaaatattgtacaaaactttgaatttattat 14720185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 28869413 - 28869358
Alignment:
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat 196  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| ||||| ||||    
T  28869413 atttttaagttaaaagttgtttgacaaaatattgtacaaaaatttaaatttgttat 28869358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 43354573 - 43354523
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  43354573 tatttttaagttaaaagttgtttgacaaaatattgtac-aaactttgaattt 43354523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 2463683 - 2463637
Alignment:
Q  159 gtttgacaaaatattgtacaaaactttgaatttattattttttggtg 205  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||    
T  2463683 gtttgacaaaatattgtacaaaactttgaatttttttttttgtggtg 2463637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 15875756 - 15875806
Alignment:
Q  134 taaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    ||||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  15875756 taaagttatttttaagttaaaagttgtttagcaaaatattgtacaaaactt 15875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 37461914 - 37461872
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  37461914 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 37461872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 28887228 - 28887174
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaa-tttattattttttggtggtgtct 211  Q
    |||||| ||||||||||||||||||||| || ||||||||||| || ||||||||    
T  28887228 tgtttggcaaaatattgtacaaaactttaaattttattattttatgatggtgtct 28887174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 14720340 - 14720307
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaat 77  Q
    |||||||||||||||||||||||||| |||||||    
T  14720340 cggtctaaaaactactttaaaacaaagttaaaat 14720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 31958299 - 31958332
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaata 78  Q
    ||||||||||||||||||||||||| ||||||||    
T  31958299 ggtctaaaaactactttaaaacaaagttaaaata 31958332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 18041185 - 18041256
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||| ||||||| ||||||| | |||||  ||||||||| |||||| |||| |||||||||||||||    
T  18041185 agttttaaagctatttttaagttaaatgttgtttcgcaaaatattttacaaa-ctttaaatttattatttttt 18041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 20259112 - 20259072
Alignment:
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaa 180  Q
    ||||||| ||||||||  |||||||||||||||||||||||    
T  20259112 tatttttaagttaaaaattgtttgacaaaatattgtacaaa 20259072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 1632 - 1466
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatt 143  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         |||||||||||||||    
T  1632 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatt 1534  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  1533 tttgagttaaaagctgtttggcaaaatattatacaaaactttgaatttattattttttggtggtgtct 1466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 1835844 - 1835678
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| |||||  |||||||||| |||         |||||||||||||||    
T  1835844 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagttgtttggttttttttttttttttagttctaaagttatt 1835746  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1835745 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 1835678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 971114 - 970946
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  971114 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 971016  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  971015 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 970946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 8878280 - 8878112
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |||||||||  |||| ||||||||||||||||          |||||||||||||    
T  8878280 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagtta 8878182  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8878181 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 8878112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 7274831 - 7274664
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  7274831 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttattttttttttagttctaaagtta 7274733  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  7274732 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgtc 7274664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 36085861 - 36086029
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| ||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  36085861 cggtctaaaagctactttaaaacaaagttaaaataaagatcttt-aagaaaaaggctaaagctgtttggtttctttatttattttttagttctaaagtta 36085959  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  36085960 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattactttttggtggtgtct 36086029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 24926005 - 24926165
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttttg 147  Q
    ||||| ||||||| ||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||         |||||||||||||||||||    
T  24926005 taaaagctacttttaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttagttctaaagttatttttg 24926103  T
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24926104 agttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgt 24926165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 8683819 - 8683652
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| | ||| || |||||||||||||         ||||||||||||||    
T  8683819 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggccaaagctatttggtttctttatttttttttagttctaaagttat 8683721  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  8683720 ttttgagttaaaagctgtttggcaaaaaattgtacaaaactttgaatttattattttttggtggtgtct 8683652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 31972442 - 31972275
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||| ||||| ||||||||||||||| |||||||| |||||||| ||||||||   |||| ||||||||||||||||         ||||||||||||||    
T  31972442 cggtttaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaatgttaaagctgtttggtttctttatttttttttagttctaaagttat 31972344  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31972343 ttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 31972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 44 - 207
Target Start/End: Original strand, 18166749 - 18166911
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    ||||||||||  |||||||||||||| |||||||| || ||||| || |||||| ||||| |||||| |||||||||        |||||||||||||||    
T  18166749 cggtctaaaagttactttaaaacaaagttaaaataaagttctttaaa-aaaaaggctaaagctgtttcgtttctttattttttttagttctaaagttatt 18166847  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggt 207  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18166848 tttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggt 18166911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 5166427 - 5166259
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    ||||| |||| ||||||||||||||| |||||||| |||||||| |||||||||   ||| ||||||||||||||||          |||||||||||||    
T  5166427 cggtcaaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggtaaaagctgtttggtttctttattttttttttagttctaaagtta 5166329  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5166328 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 5166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 3324178 - 3324346
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| || |||| || |||| ||||||||||||||||          |||||||||||||    
T  3324178 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaaaaaaaggt-taaagctgtttggtttctttattttttttttagttctaaagtta 3324276  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3324277 tttttgagttaaaagctgtttcgcaaaatattatacaaaactttgaatttattattttttggtggtgtct 3324346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 4631369 - 4631203
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-----agttctaaagtta 141  Q
    ||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||             | |||||||||||    
T  4631369 tctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttattttattttttttaattctaaagtta 4631271  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  4631270 tttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttgtggtgt 4631203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 3079876 - 3079720
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | ||||||| ||||| ||||||||||||||||        ||||||||| |||||    
T  3079876 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaag-ctaaaactgtttggtttctttattttttttagttctaaatttatt 3079778  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  3079777 tttaagttaaaagttgtttggcaaaatattgcacaaaactttgaatttattatttttt 3079720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 34912810 - 34912654
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | |||||||| ||||  |||||||||||||||        | |||||||||||||    
T  34912810 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagttgtttggtttctttattttttttaattctaaagttatt 34912712  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  34912711 tttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 34912654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 3243209 - 3243377
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | |||||||  |||| ||||||||||||||||          |||||||||||||    
T  3243209 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagg-taaagctgtttggtttctttattttttttttagttctaaagtta 3243307  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3243308 tttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 3243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 7233098 - 7233016
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7233098 agttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 7233016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 40202374 - 40202218
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| | |||||||| ||||  |||||||||||||||        |||||||||||||||    
T  40202374 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagttgtttggtttctttattttttctagttctaaagttatt 40202276  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||| | ||||||||||||||||||||| |||||||||||||||    
T  40202275 tttaagttaaaagttgttaggcaaaatattgtacaaaactttaaatttattatttttt 40202218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 10120770 - 10120612
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn--agttctaaagtta 141  Q
    |||||||||| |||||||||||||||||||||||| | |||||| | |||||| | |||| ||||||||||||||||          |||||||||||||    
T  10120770 cggtctaaaagctactttaaaacaaaattaaaataaaactctttaaggaaaaaat-taaagctgtttggtttctttattaattttttagttctaaagtta 10120672  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  10120671 tttttaagttaaaagttgtttgacaaaatattgtacaaaactttaaatttattatttttt 10120612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 36078481 - 36078637
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttga 148  Q
    ||||| ||||||||||||||| |||||||| |||||||| || |||||| ||||| ||||||| |||||||         |||||||||||||||||| |    
T  36078481 taaaagctactttaaaacaaagttaaaataaagctctttaaa-aaaaag-ctaaagctgtttgatttcttt---ttttttagttctaaagttatttttaa 36078575  T
Q  149 gttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36078576 gttaaaaggtgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgt 36078637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 1118136 - 1117981
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattttt 146  Q
    ||||||| ||||||||||||||| |||||||| | |||||| | ||||||| ||||| |||||| |||||||||        ||||||||||||||||||    
T  1118136 tctaaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaag-ctaaagctgtttagtttctttattttttttagttctaaagttattttt 1118038  T
Q  147 gagttaaaagctgtttgacaaaatattgtaca--aaactttgaatttattatttttt 201  Q
     ||||||||| |||||||||||||||||||||   ||||||||||||||||||||||    
T  1118037 aagttaaaagttgtttgacaaaatattgtacatgtaactttgaatttattatttttt 1117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 35423939 - 35423789
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||||       |||||||||||||||        |||||| ||||||||    
T  35423939 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaaagaaaaagt-------tgtttggtttctttatttattttagttcttaagttatt 35423847  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| |||||| |||||||||||||| |||||||||||||||    
T  35423846 tttaagttaaaagttgtttggcaaaatgttgtacaaaactttaaatttattatttttt 35423789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 38879291 - 38879129
Alignment:
Q  48 ctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttg 147  Q
    |||||| ||||||||||| ||| |||||||| || ||||  | |||||||| ||||  |||||||||||||||        ||||||||||||||||||     
T  38879291 ctaaaagctactttaaaataaagttaaaataaagttcttaaaggaaaaagt-taaagttgtttggtttctttattttttttagttctaaagttattttta 38879193  T
Q  148 agttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatt-ttttggtggtgtc 210  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  38879192 agttaaaagttgtttggcaaaatattttacaaaactttgaatttattatttttttggtggtgtc 38879129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 668206 - 668375
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    |||||||||| ||||||||||||||| |||||||| || ||||| ||||||||  |||||  |||||||||||||||            |||||||||||    
T  668206 cggtctaaaagctactttaaaacaaagttaaaataaagttcttt-aagaaaaaagctaaagttgtttggtttctttattttttttttttagttctaaagt 668304  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtc 210  Q
    ||||||| | ||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||    
T  668305 tatttttaaattaaaagttgtttggcaaaatattgcacaaaattttgaatttattattttttggtggtgtc 668375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 41452974 - 41452818
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatt 143  Q
    |||||| ||| ||||||||||||||| |||||||| | |||||| | |||||||| ||||  |||||||||||||||        |||||||||||||||    
T  41452974 cggtcttaaagctactttaaaacaaagttaaaataaaactctttaaggaaaaagt-taaagttgtttggtttctttattttttctagttctaaagttatt 41452876  T
Q  144 tttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||| ||||||||| |||||| ||||||||||||||||||||| ||||| || ||||||    
T  41452875 tttaagttaaaagttgtttggcaaaatattgtacaaaactttaaattttttttttttt 41452818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 17032728 - 17032895
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| |  ||||||| ||||  |||||||||||||||         |||| |||||||||    
T  17032728 cggtctaaaagctactttaaaacaaagttaaaataaagctctttaagaaaaaagt-taaagttgtttggtttctttaattttttttagttttaaagttat 17032826  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||| ||||||||| |||||| |||||||||||||||||||| |||||| || |||||| |||||||||    
T  17032827 ttttaagttaaaagttgtttggcaaaatattgtacaaaacttggaattttttttttttttgtggtgtct 17032895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 20313162 - 20313294
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta--nnnnnnnnagttctaaagtta 141  Q
    ||||||||||  |||||||||||||| |||||||| ||||| |||||||||||| ||||| ||||||||||||||||          |||||||||||||    
T  20313162 cggtctaaaagttactttaaaacaaagttaaaataaagctc-tttaagaaaaaggctaaagctgtttggtttctttattttttttttagttctaaagtta 20313260  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgt 175  Q
    |||||||||||||||||||||| |||||||||||    
T  20313261 tttttgagttaaaagctgtttggcaaaatattgt 20313294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 201
Target Start/End: Complemental strand, 45474875 - 45474725
Alignment:
Q  51 aaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttatttttgagt 150  Q
    |||| |||||||||| ||| |||||||| |||||||| | ||||||   |||| ||||||||||| ||||        ||||||||| |||||||| |||    
T  45474875 aaaattactttaaaataaagttaaaataaagctctttaaggaaaaaagttaaagctgtttggtttatttattttttttagttctaaatttatttttaagt 45474776  T
Q  151 taaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  45474775 taaaagttgtttggcaaaatattgtacaaaactttgaattttttttttttt 45474725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 38959564 - 38959687
Alignment:
Q  49 taaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta-nnnnnnnnagttctaaagttatttttg 147  Q
    ||||| ||||||||||||||| |||||||| ||||| |||||||||||| |||||  |||||||||||||||         ||||||||| |||||||||    
T  38959564 taaaagctactttaaaacaaagttaaaataaagctc-tttaagaaaaaggctaaagttgtttggtttctttatttttttttagttctaaaattatttttg 38959662  T
Q  148 agttaaaagctgtttgacaaaatat 172  Q
    |||||||||||||||||||||||||    
T  38959663 agttaaaagctgtttgacaaaatat 38959687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 9799330 - 9799405
Alignment:
Q  134 taaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  9799330 taaagttgtttttaagttaaaagttgtttgacaaaatattgtataaaactttgaatttattattttttagtggtgt 9799405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 2180178 - 2180011
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||||||||| ||||| ||| |||||||| |||||||| | |||||||| ||||  |||||| ||||||||         ||||||||||||||    
T  2180178 cggtctaaaaactactataaaataaatttaaaataaagctctttaaggaaaaagt-taaagttgtttgatttctttatttttttttagttctaaagttat 2180080  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttga-atttattattttttggtggtgtc 210  Q
    |||| ||||||||| |||||  ||||||||| |||||||||||||  ||| || |||||||||||||||    
T  2180079 ttttaagttaaaagttgttttgcaaaatattatacaaaactttgatttttttttttttttggtggtgtc 2180011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 38709765 - 38709708
Alignment:
Q  134 taaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaattt 191  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  38709765 taaagttatttttaagttaaaagttgtttgacaaaatattgtacaaaactttgaattt 38709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 17051167 - 17051220
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    |||||| |||||||||||||||||| | |||||||||||||||| |||||||||    
T  17051167 tgtttggcaaaatattgtacaaaacatagaatttattatttttttgtggtgtct 17051220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 17051064 - 17051139
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||||| ||||||||||||||| |||||||| ||||| |||||||||||   ||||  |||||||||||||||    
T  17051064 cggtctaaaagctactttaaaacaaagttaaaataaagctc-tttaagaaaaaagttaaagttgtttggtttcttta 17051139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 13549490 - 13549565
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    ||||||||||| || ||||||||||| |||||||| | |||||| | |||||||| ||||  |||||||||||||||    
T  13549490 cggtctaaaaattattttaaaacaaagttaaaataaaactctttaaggaaaaagt-taaagttgtttggtttcttta 13549565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 3708496 - 3708454
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  3708496 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 3708454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 11868920 - 11868962
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  11868920 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 11868962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 35360313 - 35360355
Alignment:
Q  158 tgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  35360313 tgtttggcaaaatattgtacaaa-ctttgaatttattatttttt 35360355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 9799239 - 9799312
Alignment:
Q  46 gtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttcttta 120  Q
    |||||||| |||||||||||||||  ||||||| |||||||| |  || |||| |||| ||||||||||||||||    
T  9799239 gtctaaaagctactttaaaacaaagataaaataaagctctttgagaaagaagt-taaaactgtttggtttcttta 9799312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 4431 - 4592
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattttt 146  Q
    ||||||| ||||||||||||||| |||||||| |||||||| ||||||||  ||||| ||||||||||||||||        ||||||||||||||||||    
T  4431 tctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaatgctaaagctgtttggtttctttattttttttagttctaaagttattttt 4529  T
Q  147 gagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  4530 gagttaaaagctgtttggccaaatattgtacaaaactttgaatttattattttttggtggtgt 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 209
Target Start/End: Complemental strand, 7610 - 7442
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||            |||||||||||    
T  7610 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggtttctttattatttttttttagttctaaagt 7512  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgt 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  7511 tatttttgagttaaaagctgtttggcaaaatattgtacaaaacttagaatttattattttttggtggtgt 7442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 25869 - 25700
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| ||||||||| ||||| ||||||||||||||||           ||||||||||||    
T  25869 cggtctaaaagctactttaaaacaaagttaaaataaaactcttt-aagaaaaaggctaaagctgtttggtttctttatttttttttttagttctaaagtt 25771  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtggtgtct 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25770 atttttgagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattattttttggtggtgtct 25700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 7204 - 7364
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagt 139  Q
    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||||||||||| |||             |||||||||||    
T  7204 cggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaggctaaagctgtttggttttttttttttttttttttagttctaaagt 7302  T
Q  140 tatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7303 tatttttgagttaaaagctatttggcaaaatattgtacaaaactttgaatttattatttttt 7364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 210
Target Start/End: Original strand, 7493 - 7656
Alignment:
Q  47 tctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnnagttctaaagttattttt 146  Q
    ||||||| ||| ||||||||||| |||||||| || || | |||||||||  |||||  ||| |||||||||||        ||||||||||||||||||    
T  7493 tctaaaagctattttaaaacaaagttaaaataaag-tcctataagaaaaaaactaaagttgtgtggtttctttattttttttagttctaaagttattttt 7591  T
Q  147 gagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgtc 210  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7592 aagttaaaagttgtttgacaaaatattgtacaaaactttgaatttattatttttttggtggtgtc 7656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 90374 - 90542
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn---agttctaaagtt 140  Q
    |||||||||| ||||||||||||||| |||||||| |  || ||||| |||||| ||||| ||||||||||||||||           | ||||||||||    
T  90374 cggtctaaaagctactttaaaacaaagttaaaataaaa-tcctttaaaaaaaaggctaaagctgtttggtttctttatttatttttttaattctaaagtt 90472  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttatta-ttttttggtggtgt 209  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  90473 atttttaagttaaaagctgtttggcaaaatattgtacaaaactttgaatttattatttttttggtggtgt 90542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 202
Target Start/End: Original strand, 110442 - 110600
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||| ||||| ||||||||||||||| |||||||| || ||||| | ||||||| ||||| ||||||| ||||||||         | ||||||||||||    
T  110442 cggtttaaaagctactttaaaacaaagttaaaataaagttctttaacgaaaaag-ctaaagctgtttgttttctttatttttttttacttctaaagttat 110540  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttg 202  Q
    |||| ||||||||| |||||  ||||||||||||  ||||||||| ||| || |||||||    
T  110541 ttttaagttaaaagttgtttagcaaaatattgtaagaaactttgattttttttttttttg 110600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 15174 - 15333
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtct-aaacctgtttggtttctttannnnnnnn-agttctaaagtta 141  Q
    |||||||||| ||||||||||||||| |||||||| |||| ||| || |||||   | ||| ||||||||||||||||         |||||||||||||    
T  15174 cggtctaaaagctactttaaaacaaagttaaaataaagctttttaaaaaaaaaaaattaaagctgtttggtttctttatttttttttagttctaaagtta 15273  T
Q  142 tttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  15274 tttttaagttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 6225 - 6375
Alignment:
Q  51 aaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttatttttgag 149  Q
    |||| ||||||||||||||  ||||||| || ||||| | |||||||| ||||  |||||||||||||||         || |||||| |||||||| ||    
T  6225 aaaattactttaaaacaaagataaaataaagttctttgaggaaaaagt-taaagttgtttggtttctttatttttttttagatctaaaattatttttaag 6323  T
Q  150 ttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  6324 ttaaaagttgtttggcaaaatattgtacaaaactttgaatttattatttttt 6375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 137944 - 138101
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctt-tannnnnnnnagttctaaagttat 142  Q
    ||||||||||| |||||||||||||| |||||||| |||||||| | |||||||| |||| || |||||||| || |         | ||||||||||||    
T  137944 cggtctaaaaattactttaaaacaaagttaaaataaagctctttaaggaaaaagt-taaagctatttggtttattattatttttttaattctaaagttat 138042  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattatttttt 201  Q
    |||| ||||||||| |||||  |||||||||| |||| ||||||||||| || ||||||    
T  138043 ttttaagttaaaagttgtttagcaaaatattgcacaagactttgaattttttttttttt 138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 132817 - 132648
Alignment:
Q  45 ggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn----agttctaaagtt 140  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||||||||  ||||| ||||||||||| |||             ||||||||||||    
T  132817 ggtctaaaagctactttaaaacaaagttaaaataaagctcttt-aagaaaaaagctaaagctgtttggtttattttttatttttttttagttctaaagtt 132719  T
Q  141 atttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattat-tttttggtggtgtct 211  Q
    |||||| | ||||||| |||||| ||||||||||||  ||||||| |||||||||| |||||||| ||||||    
T  132718 atttttaatttaaaagttgtttggcaaaatattgta-taaactttcaatttattatctttttggttgtgtct 132648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 5732 - 5793
Alignment:
Q  129 agttctaaagttattt-ttgagttaaaagctgtttgacaaaatattgtacaaaactttgaat 189  Q
    |||| ||||||||||| || ||||||||| |||||||||| |||||||||||||||||||||    
T  5732 agttttaaagttatttattaagttaaaagttgtttgacaagatattgtacaaaactttgaat 5793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 229241 - 229101
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| || |||||||||||| |||||||| || || ||||||||| |  ||||| ||| |||||||| |||         |||| |||||||||    
T  229241 cggtctaaaagctcctttaaaacaaagttaaaataaag-tcctttaagaaagaagctaaatctgcttggtttcgttatttttttttagttttaaagttat 229143  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| ||||||||| ||||||  |||||||||||||||||||    
T  229142 ttttaagttaaaagttgtttggtaaaatattgtacaaaactt 229101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 1211 - 1072
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtttctttannnnnnnn-agttctaaagttat 142  Q
    |||||||||| ||  ||||||||||| |||||||| || || ||||| ||||||| |||| |||||||||||| |||         |||| |||||||||    
T  1211 cggtctaaaagctcttttaaaacaaagttaaaataaag-tcatttaaaaaaaagt-taaagctgtttggtttcgttatttttttttagttttaaagttat 1114  T
Q  143 ttttgagttaaaagctgtttgacaaaatattgtacaaaactt 184  Q
    |||| ||||||||| |||||| ||||||||| | ||||||||    
T  1113 ttttaagttaaaagttgtttggcaaaatatttttcaaaactt 1072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 182 - 251
Alignment:
Q  44 cggtctaaaaactactttaaaacaaaattaaaatagagctcttttaagaaaaagtctaaacctgtttggtt 114  Q
    ||||||||||  |||||||||||||| |||||||| ||||| ||||||||| |  ||||| ||||||||||    
T  182 cggtctaaaagttactttaaaacaaagttaaaataaagctc-tttaagaaagaagctaaagctgtttggtt 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 50319 - 50244
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtg 205  Q
    |||| ||||| ||||||| | ||||| | |||||||||||||||||||| ||||||||| ||| || |||| |||||    
T  50319 agttttaaagctatttttaaattaaatgttgtttgacaaaatattgtac-aaactttgattttttttttttatggtg 50244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 57852 - 57777
Alignment:
Q  129 agttctaaagttatttttgagttaaaagctgtttgacaaaatattgtacaaaactttgaatttattattttttggtg 205  Q
    |||| ||||| ||||||| | ||||| | |||||||||||||||||||| ||||||||| ||| || |||| |||||    
T  57852 agttttaaagctatttttaaattaaatgttgtttgacaaaatattgtac-aaactttgattttttttttttatggtg 57777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University