View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11639_low_1 (Length: 619)

Name: NF11639_low_1
Description: NF11639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11639_low_1
NF11639_low_1
[»] chr6 (57 HSPs)
chr6 (17-605)||(26800586-26801174)
chr6 (274-561)||(22424662-22424952)
chr6 (274-561)||(17758066-17758354)
chr6 (274-561)||(3808542-3808834)
chr6 (222-561)||(2972721-2973064)
chr6 (274-561)||(17763033-17763321)
chr6 (274-561)||(5043670-5043958)
chr6 (274-561)||(21588974-21589260)
chr6 (274-561)||(26829959-26830248)
chr6 (412-561)||(21593707-21593855)
chr6 (443-561)||(26954294-26954411)
chr6 (354-561)||(603003-603213)
chr6 (427-561)||(28137400-28137533)
chr6 (445-549)||(5413403-5413507)
chr6 (445-555)||(9183041-9183150)
chr6 (460-549)||(5406224-5406313)
chr6 (460-549)||(5410549-5410638)
chr6 (436-549)||(31404675-31404788)
chr6 (445-561)||(33211195-33211310)
chr6 (445-528)||(5409078-5409162)
chr6 (436-549)||(2171532-2171644)
chr6 (445-549)||(30834545-30834649)
chr6 (465-549)||(33160381-33160465)
chr6 (436-546)||(412158-412270)
chr6 (436-546)||(3072759-3072871)
chr6 (460-561)||(3038927-3039028)
chr6 (436-549)||(16452329-16452442)
chr6 (328-526)||(9572667-9572868)
chr6 (436-517)||(6097451-6097533)
chr6 (445-518)||(16569107-16569180)
chr6 (61-221)||(27692588-27692746)
chr6 (462-560)||(4045467-4045566)
chr6 (436-549)||(16578518-16578632)
chr6 (436-549)||(16616748-16616862)
chr6 (436-549)||(16653166-16653280)
chr6 (54-178)||(27707397-27707517)
chr6 (436-549)||(16554923-16555037)
chr6 (436-549)||(16631479-16631593)
chr6 (425-561)||(25073611-25073748)
chr6 (436-549)||(27647915-27648028)
chr6 (436-512)||(25421396-25421474)
chr6 (150-221)||(27533398-27533471)
chr6 (557-602)||(17757903-17757948)
chr6 (557-602)||(17762808-17762853)
chr6 (436-512)||(6027337-6027415)
chr6 (445-512)||(13154005-13154074)
chr6 (150-221)||(27594798-27594871)
chr6 (59-137)||(27726274-27726352)
chr6 (150-221)||(27726350-27726423)
chr6 (445-512)||(33342114-33342183)
chr6 (445-512)||(34164948-34165017)
chr6 (557-602)||(3809012-3809057)
chr6 (557-602)||(5043446-5043491)
chr6 (54-216)||(27614247-27614411)
chr6 (436-501)||(34167183-34167248)
chr6 (557-602)||(603384-603429)
chr6 (436-480)||(4641090-4641134)
[»] chr7 (83 HSPs)
chr7 (221-561)||(8359103-8359442)
chr7 (222-561)||(2390325-2390667)
chr7 (222-561)||(3259038-3259372)
chr7 (222-561)||(29608780-29609113)
chr7 (274-555)||(34310552-34310835)
chr7 (278-561)||(4508548-4508831)
chr7 (274-561)||(4510386-4510673)
chr7 (274-561)||(4512228-4512515)
chr7 (222-561)||(22328183-22328516)
chr7 (274-561)||(32357897-32358179)
chr7 (220-561)||(48599121-48599459)
chr7 (274-562)||(6359792-6360078)
chr7 (425-561)||(22270016-22270151)
chr7 (274-561)||(2360819-2361097)
chr7 (436-561)||(23555083-23555208)
chr7 (445-561)||(6432014-6432129)
chr7 (460-561)||(19502221-19502322)
chr7 (436-561)||(30024733-30024857)
chr7 (460-561)||(23565085-23565186)
chr7 (425-561)||(31518946-31519081)
chr7 (436-549)||(35853969-35854082)
chr7 (445-561)||(27347860-27347975)
chr7 (427-561)||(31105385-31105518)
chr7 (436-549)||(29991108-29991221)
chr7 (460-561)||(48491622-48491723)
chr7 (445-561)||(2759207-2759322)
chr7 (445-557)||(25615900-25616012)
chr7 (445-561)||(31732979-31733094)
chr7 (436-546)||(39731426-39731537)
chr7 (474-561)||(47673981-47674068)
chr7 (445-556)||(48489479-48489589)
chr7 (443-561)||(36146416-36146532)
chr7 (460-561)||(496007-496108)
chr7 (460-561)||(1113700-1113801)
chr7 (425-561)||(4253518-4253654)
chr7 (460-549)||(8153397-8153486)
chr7 (460-549)||(25766984-25767074)
chr7 (445-549)||(14069843-14069946)
chr7 (445-549)||(14379871-14379974)
chr7 (445-561)||(41317444-41317559)
chr7 (474-561)||(4586204-4586291)
chr7 (474-561)||(26417359-26417446)
chr7 (436-555)||(47676137-47676255)
chr7 (460-561)||(18126687-18126788)
chr7 (445-561)||(41649021-41649135)
chr7 (445-561)||(43864287-43864402)
chr7 (460-546)||(43504178-43504266)
chr7 (436-549)||(20343951-20344064)
chr7 (425-561)||(23344018-23344151)
chr7 (445-555)||(18396367-18396477)
chr7 (460-527)||(24525526-24525594)
chr7 (425-549)||(48408857-48408984)
chr7 (445-545)||(3904626-3904726)
chr7 (445-561)||(38671232-38671347)
chr7 (436-549)||(24789896-24790009)
chr7 (445-517)||(1560675-1560749)
chr7 (460-549)||(4178829-4178917)
chr7 (429-561)||(36574510-36574641)
chr7 (443-561)||(12097875-12097984)
chr7 (557-601)||(22269793-22269837)
chr7 (436-512)||(18388760-18388838)
chr7 (436-512)||(18392196-18392274)
chr7 (502-561)||(31518838-31518896)
chr7 (436-512)||(32060322-32060400)
chr7 (557-602)||(2361275-2361320)
chr7 (557-602)||(29608555-29608600)
chr7 (445-497)||(26639432-26639484)
chr7 (557-605)||(34311020-34311068)
chr7 (451-528)||(5116679-5116758)
chr7 (436-512)||(6592340-6592418)
chr7 (436-512)||(6594558-6594636)
chr7 (557-602)||(8359622-8359667)
chr7 (445-509)||(30814530-30814594)
chr7 (557-600)||(4512694-4512737)
chr7 (557-598)||(2390105-2390146)
chr7 (557-602)||(4509010-4509055)
chr7 (557-602)||(4510852-4510897)
chr7 (429-528)||(5513661-5513760)
chr7 (557-598)||(6360216-6360257)
chr7 (557-598)||(6431794-6431835)
chr7 (274-307)||(22270241-22270274)
chr7 (274-307)||(30814690-30814723)
chr7 (557-605)||(3258812-3258860)
[»] chr4 (100 HSPs)
chr4 (224-561)||(41964458-41964794)
chr4 (222-561)||(379423-379763)
chr4 (222-561)||(12073435-12073773)
chr4 (274-561)||(2209756-2210048)
chr4 (274-561)||(50673686-50673972)
chr4 (222-560)||(35662485-35662816)
chr4 (277-561)||(40632488-40632772)
chr4 (222-559)||(8665453-8665787)
chr4 (240-561)||(26699251-26699568)
chr4 (368-561)||(46703543-46703737)
chr4 (222-561)||(8648182-8648526)
chr4 (274-561)||(41639469-41639754)
chr4 (354-561)||(6655999-6656205)
chr4 (245-555)||(33989893-33990199)
chr4 (258-561)||(12119582-12119893)
chr4 (220-561)||(26364279-26364618)
chr4 (274-561)||(50262534-50262826)
chr4 (220-433)||(55085233-55085439)
chr4 (354-561)||(27416884-27417090)
chr4 (414-561)||(54883063-54883210)
chr4 (436-561)||(56178637-56178762)
chr4 (224-400)||(46703752-46703929)
chr4 (368-559)||(33089923-33090116)
chr4 (445-561)||(48893648-48893763)
chr4 (445-561)||(9927468-9927583)
chr4 (445-561)||(26175646-26175761)
chr4 (425-560)||(31474195-31474329)
chr4 (428-561)||(37229714-37229847)
chr4 (460-561)||(48143086-48143187)
chr4 (445-561)||(5429722-5429837)
chr4 (425-561)||(6542169-6542304)
chr4 (434-549)||(29999804-29999920)
chr4 (445-561)||(36463399-36463514)
chr4 (445-561)||(37740668-37740783)
chr4 (445-561)||(46147401-46147516)
chr4 (436-546)||(13992293-13992402)
chr4 (445-561)||(47038421-47038535)
chr4 (445-549)||(5370092-5370196)
chr4 (445-561)||(36994567-36994682)
chr4 (436-546)||(31495316-31495428)
chr4 (462-561)||(34570440-34570539)
chr4 (425-558)||(4588005-4588137)
chr4 (424-555)||(22882740-22882870)
chr4 (424-555)||(22934404-22934534)
chr4 (445-549)||(12743935-12744038)
chr4 (445-549)||(12745324-12745427)
chr4 (425-549)||(52095352-52095475)
chr4 (478-561)||(24969155-24969238)
chr4 (222-346)||(54881561-54881679)
chr4 (460-561)||(54199930-54200031)
chr4 (445-549)||(12739560-12739663)
chr4 (445-561)||(45687192-45687307)
chr4 (474-561)||(3913491-3913578)
chr4 (436-549)||(8393448-8393562)
chr4 (436-549)||(8395657-8395771)
chr4 (476-549)||(12744087-12744160)
chr4 (445-561)||(52467364-52467479)
chr4 (445-560)||(29254538-29254652)
chr4 (476-546)||(12745476-12745546)
chr4 (252-399)||(41961603-41961746)
chr4 (460-561)||(5871863-5871964)
chr4 (474-549)||(12747794-12747869)
chr4 (460-527)||(13009468-13009536)
chr4 (416-561)||(21688292-21688437)
chr4 (429-558)||(21703829-21703958)
chr4 (447-559)||(34112862-34112973)
chr4 (460-561)||(5207866-5207967)
chr4 (425-528)||(51337139-51337242)
chr4 (408-480)||(38811162-38811235)
chr4 (557-602)||(40630803-40630848)
chr4 (425-559)||(44967818-44967952)
chr4 (557-602)||(50674150-50674195)
chr4 (460-512)||(7124992-7125046)
chr4 (274-379)||(21688470-21688572)
chr4 (557-603)||(379197-379243)
chr4 (445-512)||(5136155-5136224)
chr4 (445-512)||(5138380-5138449)
chr4 (502-559)||(44570432-44570489)
chr4 (557-602)||(8647957-8648002)
chr4 (557-602)||(8665226-8665271)
chr4 (557-602)||(26364084-26364129)
chr4 (557-602)||(33989681-33989726)
chr4 (557-602)||(41964234-41964279)
chr4 (477-559)||(6677514-6677597)
chr4 (511-559)||(34788851-34788898)
chr4 (318-388)||(6719771-6719842)
chr4 (460-512)||(7122773-7122827)
chr4 (325-400)||(32091645-32091719)
chr4 (245-304)||(33090164-33090223)
chr4 (220-277)||(27416789-27416844)
chr4 (557-602)||(6655775-6655820)
chr4 (557-598)||(12073215-12073256)
chr4 (429-523)||(35369440-35369534)
chr4 (243-296)||(38811016-38811069)
chr4 (557-602)||(54882839-54882884)
chr4 (512-561)||(55085442-55085490)
chr4 (557-602)||(55085669-55085714)
chr4 (511-555)||(32091527-32091570)
chr4 (425-551)||(37754949-37755076)
chr4 (566-602)||(50263011-50263047)
[»] chr1 (91 HSPs)
chr1 (222-526)||(28242382-28242688)
chr1 (243-561)||(47115214-47115533)
chr1 (222-561)||(37168340-37168678)
chr1 (222-561)||(31925498-31925832)
chr1 (274-561)||(37032907-37033198)
chr1 (220-561)||(7482009-7482356)
chr1 (274-561)||(47255179-47255465)
chr1 (274-561)||(29136290-29136577)
chr1 (274-561)||(11348741-11349030)
chr1 (274-561)||(13548842-13549125)
chr1 (274-527)||(37876604-37876858)
chr1 (274-561)||(13546935-13547214)
chr1 (274-561)||(42297815-42298100)
chr1 (253-561)||(34603619-34603914)
chr1 (250-559)||(6808497-6808799)
chr1 (360-561)||(19754538-19754737)
chr1 (416-558)||(193657-193799)
chr1 (220-375)||(194750-194901)
chr1 (436-561)||(8550787-8550912)
chr1 (354-559)||(19752731-19752932)
chr1 (421-561)||(22079359-22079501)
chr1 (436-561)||(3189373-3189498)
chr1 (436-561)||(3198190-3198315)
chr1 (436-561)||(3207029-3207154)
chr1 (460-561)||(46064961-46065062)
chr1 (445-561)||(28220236-28220351)
chr1 (445-561)||(28265564-28265679)
chr1 (443-561)||(49918393-49918510)
chr1 (245-559)||(12318336-12318646)
chr1 (445-561)||(834177-834292)
chr1 (445-561)||(3156908-3157023)
chr1 (425-561)||(15820350-15820485)
chr1 (445-561)||(31659281-31659396)
chr1 (445-556)||(28223431-28223541)
chr1 (443-549)||(20762727-20762833)
chr1 (436-549)||(13316352-13316465)
chr1 (445-558)||(13659346-13659458)
chr1 (460-561)||(44455203-44455304)
chr1 (460-552)||(1833574-1833666)
chr1 (445-561)||(4552647-4552762)
chr1 (445-561)||(45644364-45644479)
chr1 (429-554)||(5459956-5460081)
chr1 (475-561)||(16455664-16455750)
chr1 (443-561)||(50167183-50167300)
chr1 (436-549)||(51765450-51765565)
chr1 (222-308)||(31929345-31929431)
chr1 (443-561)||(37503565-37503679)
chr1 (436-561)||(50169211-50169335)
chr1 (445-561)||(13137986-13138101)
chr1 (426-561)||(23555257-23555390)
chr1 (443-561)||(41360957-41361074)
chr1 (426-561)||(37282682-37282817)
chr1 (436-561)||(196908-197033)
chr1 (443-561)||(40122204-40122323)
chr1 (408-500)||(2926613-2926706)
chr1 (474-561)||(10925266-10925356)
chr1 (255-556)||(9109239-9109540)
chr1 (445-561)||(37559877-37559994)
chr1 (425-561)||(927966-928101)
chr1 (427-562)||(2262965-2263101)
chr1 (445-561)||(3847131-3847246)
chr1 (436-546)||(40282435-40282545)
chr1 (453-545)||(13938195-13938288)
chr1 (436-517)||(9987287-9987369)
chr1 (436-517)||(20622237-20622319)
chr1 (476-556)||(30476486-30476566)
chr1 (436-549)||(9036471-9036584)
chr1 (436-512)||(44203722-44203800)
chr1 (460-517)||(36683766-36683824)
chr1 (245-307)||(41136107-41136169)
chr1 (557-602)||(7482534-7482579)
chr1 (557-602)||(19754310-19754355)
chr1 (445-517)||(21054044-21054117)
chr1 (557-602)||(37168116-37168161)
chr1 (557-602)||(37879215-37879260)
chr1 (275-308)||(6398927-6398960)
chr1 (557-602)||(28242207-28242252)
chr1 (557-602)||(37033377-37033422)
chr1 (557-602)||(42298279-42298324)
chr1 (557-602)||(47114990-47115035)
chr1 (558-598)||(13547394-13547434)
chr1 (558-598)||(13549305-13549345)
chr1 (480-561)||(3460739-3460821)
chr1 (463-501)||(8871089-8871127)
chr1 (557-598)||(11348521-11348562)
chr1 (557-602)||(31926010-31926055)
chr1 (532-561)||(37879007-37879036)
chr1 (426-561)||(44650153-44650288)
chr1 (511-559)||(1050520-1050567)
chr1 (245-305)||(22079598-22079658)
chr1 (511-555)||(25652135-25652178)
[»] chr8 (70 HSPs)
chr8 (222-561)||(40328822-40329158)
chr8 (222-561)||(3772235-3772571)
chr8 (274-561)||(11384028-11384314)
chr8 (274-561)||(18655443-18655732)
chr8 (316-561)||(4283567-4283811)
chr8 (276-561)||(42434831-42435116)
chr8 (354-561)||(40221788-40221994)
chr8 (354-561)||(10930116-10930324)
chr8 (436-561)||(42498237-42498362)
chr8 (425-561)||(1292454-1292588)
chr8 (468-561)||(30143383-30143476)
chr8 (445-561)||(3303680-3303795)
chr8 (445-561)||(15212829-15212944)
chr8 (445-561)||(27811321-27811436)
chr8 (445-561)||(33352193-33352308)
chr8 (445-561)||(43036466-43036581)
chr8 (460-549)||(19945383-19945473)
chr8 (436-545)||(34256507-34256616)
chr8 (436-549)||(44303910-44304023)
chr8 (445-561)||(5689314-5689429)
chr8 (445-559)||(7597659-7597774)
chr8 (445-546)||(2627792-2627895)
chr8 (447-561)||(4731701-4731814)
chr8 (447-556)||(4162545-4162652)
chr8 (436-545)||(17982712-17982821)
chr8 (460-561)||(18141863-18141964)
chr8 (436-549)||(31218312-31218425)
chr8 (436-545)||(34254331-34254440)
chr8 (425-557)||(10015128-10015257)
chr8 (445-561)||(12702644-12702759)
chr8 (445-561)||(40321123-40321238)
chr8 (474-561)||(30291650-30291737)
chr8 (443-561)||(19491707-19491824)
chr8 (436-549)||(1746219-1746331)
chr8 (436-549)||(3439558-3439671)
chr8 (474-561)||(44353836-44353923)
chr8 (443-561)||(1345379-1345496)
chr8 (425-555)||(8153807-8153936)
chr8 (445-559)||(18106091-18106201)
chr8 (445-556)||(29796329-29796442)
chr8 (454-554)||(32902191-32902292)
chr8 (445-558)||(41366625-41366736)
chr8 (429-559)||(11711993-11712124)
chr8 (222-307)||(40222019-40222102)
chr8 (445-559)||(6599017-6599130)
chr8 (445-559)||(6674470-6674583)
chr8 (431-544)||(3073870-3073981)
chr8 (445-525)||(4733784-4733864)
chr8 (445-517)||(4743224-4743296)
chr8 (436-549)||(25690009-25690122)
chr8 (317-464)||(10240263-10240411)
chr8 (356-439)||(2999723-2999806)
chr8 (445-549)||(9765800-9765902)
chr8 (245-286)||(15691105-15691146)
chr8 (445-560)||(8965701-8965815)
chr8 (474-561)||(1822335-1822423)
chr8 (474-561)||(1856780-1856868)
chr8 (311-556)||(11137073-11137320)
chr8 (445-501)||(38863961-38864017)
chr8 (557-605)||(40328595-40328643)
chr8 (445-512)||(15290614-15290683)
chr8 (445-512)||(15470983-15471052)
chr8 (445-512)||(42575333-42575402)
chr8 (557-602)||(40221564-40221609)
chr8 (511-561)||(3231872-3231921)
chr8 (531-561)||(10929842-10929872)
chr8 (485-526)||(10929865-10929907)
chr8 (484-559)||(30909413-30909487)
chr8 (561-605)||(2999828-2999872)
chr8 (502-561)||(10240197-10240256)
[»] chr3 (91 HSPs)
chr3 (222-561)||(46860517-46860857)
chr3 (222-561)||(41819310-41819648)
chr3 (221-561)||(36018895-36019233)
chr3 (274-561)||(49199303-49199595)
chr3 (274-561)||(43401635-43401927)
chr3 (274-561)||(43403578-43403870)
chr3 (274-552)||(6095438-6095715)
chr3 (274-527)||(55301808-55302064)
chr3 (274-561)||(30236168-30236456)
chr3 (277-561)||(54593747-54594033)
chr3 (222-561)||(46173400-46173738)
chr3 (412-561)||(4569995-4570144)
chr3 (436-561)||(34491255-34491379)
chr3 (436-561)||(7762308-7762433)
chr3 (425-561)||(32891147-32891282)
chr3 (354-545)||(40913352-40913546)
chr3 (274-561)||(47304294-47304583)
chr3 (460-561)||(7764507-7764608)
chr3 (436-561)||(9581325-9581450)
chr3 (445-561)||(40735426-40735541)
chr3 (436-549)||(19683889-19684002)
chr3 (460-561)||(29810911-29811012)
chr3 (436-549)||(45095218-45095331)
chr3 (445-561)||(29813106-29813221)
chr3 (445-561)||(44331588-44331703)
chr3 (445-561)||(51398857-51398972)
chr3 (425-561)||(53921493-53921628)
chr3 (460-561)||(760890-760991)
chr3 (445-558)||(16499075-16499187)
chr3 (460-549)||(37408513-37408602)
chr3 (445-561)||(22835012-22835127)
chr3 (445-561)||(40734541-40734656)
chr3 (436-546)||(801148-801260)
chr3 (443-561)||(44700487-44700603)
chr3 (436-549)||(5258144-5258257)
chr3 (222-559)||(20937701-20938032)
chr3 (436-549)||(23197939-23198052)
chr3 (436-549)||(23200138-23200251)
chr3 (460-561)||(39153385-39153486)
chr3 (445-561)||(29196396-29196511)
chr3 (436-549)||(5260323-5260436)
chr3 (460-546)||(7780028-7780114)
chr3 (445-561)||(29682402-29682517)
chr3 (445-561)||(31314488-31314603)
chr3 (445-561)||(32744446-32744561)
chr3 (262-397)||(5433774-5433905)
chr3 (274-400)||(31340064-31340186)
chr3 (460-546)||(9636150-9636236)
chr3 (460-561)||(5236481-5236581)
chr3 (425-559)||(33191877-33192009)
chr3 (445-561)||(9666476-9666591)
chr3 (424-562)||(35138694-35138832)
chr3 (445-545)||(4055773-4055874)
chr3 (436-549)||(6716554-6716667)
chr3 (436-549)||(54635179-54635292)
chr3 (502-561)||(31340268-31340326)
chr3 (445-517)||(45283071-45283145)
chr3 (250-396)||(5270580-5270723)
chr3 (445-561)||(23391919-23392034)
chr3 (408-562)||(39127589-39127745)
chr3 (445-545)||(4075480-4075581)
chr3 (455-561)||(5433901-5434001)
chr3 (445-501)||(27305720-27305775)
chr3 (557-605)||(28074432-28074480)
chr3 (436-512)||(3617540-3617618)
chr3 (445-512)||(25637517-25637586)
chr3 (557-602)||(4569770-4569815)
chr3 (557-605)||(46860287-46860335)
chr3 (475-561)||(51352150-51352235)
chr3 (445-512)||(4598532-4598601)
chr3 (445-512)||(10056309-10056378)
chr3 (445-512)||(10058531-10058600)
chr3 (445-512)||(10060753-10060822)
chr3 (445-512)||(10062975-10063044)
chr3 (445-512)||(10065197-10065266)
chr3 (445-512)||(10211485-10211554)
chr3 (460-561)||(23410353-23410454)
chr3 (557-602)||(6095903-6095948)
chr3 (425-501)||(2075065-2075140)
chr3 (557-605)||(36018667-36018715)
chr3 (557-605)||(54593521-54593569)
chr3 (557-600)||(5434181-5434224)
chr3 (460-512)||(10209265-10209319)
chr3 (445-512)||(4600753-4600822)
chr3 (560-602)||(49199778-49199820)
chr3 (557-598)||(34491036-34491077)
chr3 (557-602)||(40913158-40913203)
chr3 (557-598)||(43404037-43404078)
chr3 (250-306)||(1683768-1683824)
chr3 (515-555)||(24635306-24635345)
chr3 (470-559)||(25491003-25491091)
[»] chr5 (69 HSPs)
chr5 (224-560)||(27637403-27637737)
chr5 (277-561)||(213508-213795)
chr5 (354-561)||(40147304-40147510)
chr5 (245-559)||(316807-317121)
chr5 (274-561)||(5058088-5058375)
chr5 (222-561)||(16640737-16641062)
chr5 (425-561)||(13239794-13239930)
chr5 (425-561)||(28278359-28278494)
chr5 (425-560)||(16452124-16452258)
chr5 (274-527)||(27015599-27015848)
chr5 (436-545)||(37439200-37439309)
chr5 (425-561)||(9049332-9049467)
chr5 (436-561)||(538068-538192)
chr5 (460-549)||(25412815-25412904)
chr5 (445-561)||(13488246-13488361)
chr5 (445-561)||(42428440-42428555)
chr5 (412-502)||(4160701-4160791)
chr5 (436-549)||(13343116-13343228)
chr5 (436-549)||(36074043-36074155)
chr5 (269-385)||(40751195-40751308)
chr5 (445-561)||(533812-533927)
chr5 (436-546)||(9789224-9789335)
chr5 (436-546)||(16409532-16409643)
chr5 (436-546)||(26177939-26178050)
chr5 (443-561)||(8565954-8566071)
chr5 (425-561)||(13695680-13695816)
chr5 (436-549)||(30182643-30182756)
chr5 (460-561)||(33831723-33831824)
chr5 (464-561)||(42309963-42310060)
chr5 (445-549)||(32636879-32636982)
chr5 (443-555)||(42426243-42426354)
chr5 (436-546)||(18441648-18441759)
chr5 (445-561)||(30682932-30683049)
chr5 (474-561)||(39468587-39468674)
chr5 (250-555)||(10054633-10054935)
chr5 (447-555)||(28750667-28750774)
chr5 (274-385)||(40763200-40763308)
chr5 (474-561)||(38747048-38747135)
chr5 (436-549)||(10593312-10593426)
chr5 (436-517)||(26170848-26170930)
chr5 (425-561)||(3075648-3075783)
chr5 (448-559)||(33906042-33906154)
chr5 (445-561)||(31183015-31183129)
chr5 (436-546)||(29722582-29722692)
chr5 (436-546)||(29751160-29751270)
chr5 (436-549)||(22536290-22536403)
chr5 (425-529)||(30793210-30793314)
chr5 (455-559)||(3325958-3326063)
chr5 (502-560)||(42926911-42926968)
chr5 (436-546)||(29720422-29720532)
chr5 (436-512)||(25078211-25078289)
chr5 (436-512)||(25136180-25136258)
chr5 (436-512)||(40380181-40380259)
chr5 (436-512)||(40382392-40382470)
chr5 (425-527)||(42926967-42927069)
chr5 (557-602)||(213288-213333)
chr5 (557-602)||(27015351-27015396)
chr5 (557-602)||(28278135-28278180)
chr5 (557-602)||(40147080-40147125)
chr5 (445-501)||(19806466-19806521)
chr5 (368-559)||(10700581-10700771)
chr5 (445-512)||(16544499-16544568)
chr5 (445-512)||(16546721-16546790)
chr5 (245-305)||(4160885-4160945)
chr5 (252-296)||(8445995-8446039)
chr5 (253-304)||(30793418-30793469)
chr5 (511-557)||(14689503-14689548)
chr5 (245-303)||(33905837-33905895)
chr5 (557-602)||(38746824-38746869)
[»] chr2 (55 HSPs)
chr2 (222-598)||(7451123-7451500)
chr2 (265-561)||(42287940-42288235)
chr2 (221-510)||(17450671-17450957)
chr2 (274-561)||(45726972-45727257)
chr2 (222-561)||(33648214-33648548)
chr2 (274-561)||(35446726-35447009)
chr2 (274-561)||(1631571-1631857)
chr2 (333-561)||(24398100-24398332)
chr2 (445-561)||(2334427-2334543)
chr2 (436-561)||(36988076-36988201)
chr2 (430-561)||(17490143-17490273)
chr2 (445-558)||(17057379-17057491)
chr2 (445-558)||(17085362-17085474)
chr2 (445-561)||(6595015-6595131)
chr2 (445-561)||(36773605-36773720)
chr2 (243-559)||(30217858-30218168)
chr2 (445-561)||(723754-723869)
chr2 (443-561)||(33162458-33162575)
chr2 (436-549)||(4503133-4503245)
chr2 (436-549)||(5723256-5723369)
chr2 (436-549)||(45099810-45099922)
chr2 (474-558)||(7815311-7815395)
chr2 (445-561)||(36318019-36318134)
chr2 (460-561)||(42362395-42362496)
chr2 (445-561)||(11067348-11067463)
chr2 (445-561)||(38312283-38312398)
chr2 (446-561)||(26353227-26353341)
chr2 (460-549)||(4484354-4484444)
chr2 (445-561)||(14633835-14633951)
chr2 (445-561)||(34139780-34139896)
chr2 (445-561)||(11151601-11151716)
chr2 (445-549)||(29867924-29868027)
chr2 (447-499)||(28672036-28672088)
chr2 (436-546)||(32289621-32289732)
chr2 (460-545)||(30833404-30833490)
chr2 (425-558)||(42019859-42019995)
chr2 (460-561)||(11049596-11049698)
chr2 (436-549)||(36205665-36205777)
chr2 (436-561)||(11690544-11690668)
chr2 (470-561)||(13121812-13121901)
chr2 (436-546)||(6266749-6266859)
chr2 (445-549)||(13656041-13656146)
chr2 (250-559)||(42261310-42261609)
chr2 (245-303)||(24398377-24398435)
chr2 (436-512)||(12647386-12647464)
chr2 (557-602)||(1632036-1632081)
chr2 (557-602)||(35447188-35447233)
chr2 (445-509)||(39284930-39284994)
chr2 (557-602)||(42288414-42288459)
chr2 (444-556)||(7597020-7597131)
chr2 (474-561)||(14202450-14202530)
chr2 (460-501)||(42412121-42412161)
chr2 (511-555)||(4561137-4561180)
chr2 (508-559)||(34811295-34811345)
chr2 (557-600)||(45726750-45726793)
[»] scaffold0176 (1 HSPs)
scaffold0176 (278-561)||(17845-18128)
[»] scaffold0236 (1 HSPs)
scaffold0236 (222-547)||(10546-10869)
[»] scaffold0466 (2 HSPs)
scaffold0466 (274-561)||(7370-7654)
scaffold0466 (557-598)||(7151-7192)
[»] scaffold0927 (1 HSPs)
scaffold0927 (222-326)||(3377-3482)
[»] scaffold0219 (1 HSPs)
scaffold0219 (433-559)||(27439-27566)
[»] scaffold0286 (2 HSPs)
scaffold0286 (436-549)||(11612-11725)
scaffold0286 (557-602)||(11377-11422)
[»] scaffold0016 (1 HSPs)
scaffold0016 (436-549)||(114657-114770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (436-549)||(434588-434701)
scaffold0002 (250-559)||(490145-490444)
[»] scaffold0006 (1 HSPs)
scaffold0006 (445-558)||(149107-149219)
[»] scaffold0066 (1 HSPs)
scaffold0066 (445-561)||(20425-20540)
[»] scaffold1519 (1 HSPs)
scaffold1519 (436-549)||(971-1083)
[»] scaffold0491 (2 HSPs)
scaffold0491 (436-546)||(8735-8846)
scaffold0491 (436-546)||(11161-11272)
[»] scaffold0674 (1 HSPs)
scaffold0674 (445-512)||(3735-3804)
[»] scaffold0565 (1 HSPs)
scaffold0565 (436-512)||(2604-2682)
[»] scaffold0349 (2 HSPs)
scaffold0349 (59-137)||(4853-4931)
scaffold0349 (150-221)||(4929-5002)
[»] scaffold0014 (2 HSPs)
scaffold0014 (503-561)||(80351-80408)
scaffold0014 (557-602)||(80587-80632)
[»] scaffold0197 (1 HSPs)
scaffold0197 (331-400)||(1291-1360)
[»] scaffold0137 (1 HSPs)
scaffold0137 (445-512)||(6363-6432)
[»] scaffold0477 (1 HSPs)
scaffold0477 (436-480)||(6981-7025)


Alignment Details
Target: chr6 (Bit Score: 556; Significance: 0; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 556; E-Value: 0
Query Start/End: Original strand, 17 - 605
Target Start/End: Complemental strand, 26801174 - 26800586
Alignment:
Q  17 catttaaagtccacagttttacgcagttgttaatctctgataggatggttcagattacagattcactaatttagtttccatccatctcagctatggattt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26801174 catttaaagtccacagttttacgcagttgttaatctctgataggatggttcagattacagattcactaatttagtttccatccatctcagctatggattt 26801075  T
Q  117 aaatcggatggactagattggtgctgttatttctgggaatccatttccatatcaactccatgcaaacaactaaaatatggactaagaattatcccacatc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26801074 aaatcggatggactagattggtgctgttatttctgggaatccatttccatatcaactccatgcaaacaactaaaatatggactaagaattatcccacatc 26800975  T
Q  217 atgtatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaatta 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800974 atgtatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaatta 26800875  T
Q  317 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaa 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||       |||||||||    
T  26800874 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagcaaaaccacaatctaaccaaaagataaacaagataaaaagagtagagaaa 26800775  T
Q  417 agataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaa 516  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800774 agataacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaa 26800675  T
Q  517 agagatacaaaattagttacaagaaattagcttcaacaagctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800674 agagatacaaaattagttacaagaaattagcttcaacaagctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 26800586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 22424662 - 22424952
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaa-- 371  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||| | |||||| ||||||||| ||||||      
T  22424662 gtggagcaagtatcaatggtaaccaataaccaaatgtaaataaccacaaacaacaacaacaatctagatctaatatagaaaccaagtgcattgaaaaaaa 22424761  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    ||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  22424762 ccacaatctaacctaaggataaacaagataaagagagtagagaaaagataacaacaccaagaaatgttcacccagtacggtccaacaatgacctactctg 22424861  T
Q  472 gaggagagattgatctctccaatccactataatgagttcttacaaagagatac-aaaattagttacaagaaattagcttcaacaagctcac 561  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||||    
T  22424862 aaggagagattgatctctccaatccactataatgagttcttacaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcac 22424952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 17758354 - 17758066
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  17758354 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccgcaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 17758255  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngt-agagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    |||||||||||||||||||||||||||       || | || ||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||| |    
T  17758254 acaatctaaccaaaggataaacaagataaagagcgtaaaaggaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgaactactctag 17758155  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  17758154 aggggagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 17758066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 3808542 - 3808834
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||| ||||||| ||||||    
T  3808542 gtggagcaagtatcaatggcaaccaataatcaaatgtaaataaccaaaagcaatagcaacaatctagatctaatctagaaaacaaatgcatagcaaaacc 3808641  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 469  Q
    | |||||||||||||||||||||||||       |||||||||   ||| |||||| |||||| | |||||| ||||||||||||||  |||||||||||    
T  3808642 ataatctaaccaaaggataaacaagataaagagagtagagaaaaatagacaacaaccccaagagattgttcacctagttcggtccaatcatgacctactc 3808741  T
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  3808742 tggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagtttcaacaagctcac 3808834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 222 - 561
Target Start/End: Original strand, 2972721 - 2973064
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    ||||||||||| || ||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  2972721 tgttgtgaatttggtctcaaattccaaacatcacatcaatgaaatttaaattcgttgagcaagtatcaatggcaaccaataatcaaatgtaaataaccac 2972820  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatag-aaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagag----aa 415  Q
    || ||| ||||||||| |||| |||||||| |||  |||||||||| ||||||||||||||||||||| ||||||||||||       | ||||    ||    
T  2972821 aaacaacaacaacaatatagacctagtctataaactaagtgcatagaaaaaaccacaatctaaccaaatgataaacaagatatagagag-agagtaaaaa 2972919  T
Q  416 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 514  Q
    || ||||||||||||||||||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  2972920 aaaataacaacaccaagaaatgttcacctagttcggtcgaac-ttgacctactcttgaggagagattgatctctccaatccactatcaatgagttcttac 2973018  T
Q  515 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  2973019 aaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 2973064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 17763321 - 17763033
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||     
T  17763321 gtggagcaagtatcaatgacaaccaataaccaaatgtaaataatcacaaacaataacaacaatctagatctaatctagataacaagtgcatagcaaaact 17763222  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    |||||||||||||||||| ||||||||       ||| | ||||||||||||||||||||||||||||| ||||||||||||||   ||| |||||||||    
T  17763221 acaatctaaccaaaggatgaacaagataaagagagtaaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgatctactctgg 17763122  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||    
T  17763121 aggagagattgatcactccaatccactatcaatgagttcttccaaaaagatac-aaatgagttacaagaaattagcttcaacaagctcac 17763033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 5043958 - 5043670
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaa 371  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||| ||  || ||| |||| ||  ||||||||||| ||||    
T  5043958 gtggagcacgtatcaatgacaaccaataaccaaatgtaaataacctcaagcaacaacaacaatatatagacctattctataat-caagtgcatagcaaaa 5043860  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    |||||||| ||||||   |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  5043859 ccacaatccaaccaagaaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactatg 5043760  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  5043759 gaggagagattgatctctccaatctactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 5043670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 21589260 - 21588974
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||| |||||| |||||||      | ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||    
T  21589260 gtggagcaagtatcaatggaaaccaacaaccaaaaaatgttaaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaacc 21589161  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 473  Q
    |||||| ||| || | |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||    
T  21589160 acaatccaactaaggaataaacaagataaggaaagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctgga 21589062  T
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  21589061 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 21588974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 26829959 - 26830248
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||| ||||||||||| ||||||    
T  26829959 gtggagcaagtatcaatggaaaccaataaccaaatgtaaataaccacaagcaataacaacaatataaacctagtctataaaccaagtgcatagcaaaacc 26830058  T
Q  374 acaatctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    |||||| ||   ||||| ||||||||||       |  || |||||||||||||||||||||||||||||| | ||||| ||| |||  ||||||||| |    
T  26830059 acaatccaaagcaaggaataaacaagataaagagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcagtcaaact-tgacctacttt 26830157  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||    
T  26830158 ggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatggattacaagaaattagcttcaacaagctcac 26830248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 412 - 561
Target Start/End: Complemental strand, 21593855 - 21593707
Alignment:
Q  412 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 510  Q
    |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21593855 agaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttc 21593757  T
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  21593756 ttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 21593707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 26954294 - 26954411
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||    
T  26954294 ctagttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-agatgagttacaagaa 26954391  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||||||||||||    
T  26954392 attagcttcaacaagctcac 26954411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 354 - 561
Target Start/End: Original strand, 603003 - 603213
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttc 449  Q
    ||||||||||||| |||||||||||| |||||| | |||||||||||       ||||||||||   || ||||||| ||||| || ||| | | |||||    
T  603003 aacaagtgcatagtaaaaccacaatccaaccaaggcataaacaagataaagagagtagagaaaaatagacaacaacatcaagagattgttgacccagttc 603102  T
Q  450 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagct 548  Q
    ||||||||  ||||||| ||| | |||||||||||| ||||||||||||||| || ||||||||||||||||||||||| |  |||||||||||||||||    
T  603103 ggtccaact-tgacctaatcttggggagagattgatttctccaatccactatcaacgagttcttacaaagagatacaaa-tgggttacaagaaattagct 603200  T
Q  549 tcaacaagctcac 561  Q
    |||||||||||||    
T  603201 tcaacaagctcac 603213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 427 - 561
Target Start/End: Original strand, 28137400 - 28137533
Alignment:
Q  427 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 525  Q
    |||||||||||||||   | |||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||     
T  28137400 accaagaaatgttcacacaattcggtccaact-tgacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagaaatac- 28137497  T
Q  526 aaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||  |||||||||||||||||| |||||||||||    
T  28137498 aaatgggttacaagaaattagcttaaacaagctcac 28137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 5413403 - 5413507
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  5413403 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaat 5413501  T
Q  544 tagctt 549  Q
    ||||||    
T  5413502 tagctt 5413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 445 - 555
Target Start/End: Original strand, 9183041 - 9183150
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9183041 agttcggtccaact-tgacataatctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9183138  T
Q  544 tagcttcaacaa 555  Q
    ||||||||||||    
T  9183139 tagcttcaacaa 9183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 549
Target Start/End: Original strand, 5406224 - 5406313
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5406224 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 5406313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 549
Target Start/End: Original strand, 5410549 - 5410638
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  5410549 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 5410638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 31404675 - 31404788
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  31404675 tgttcacccagttcggtccaaacttggcctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 31404773  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  31404774 acaagaaattagctt 31404788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 33211195 - 33211310
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||| || ||||||||||    
T  33211195 agttcggtccaact-tgacctactctgggggagagattgatctctccaatccattataaatgagttcttacaaagagatac-aaatgagctacaagaaat 33211292  T
Q  544 tagcttcaacaagctcac 561  Q
    || ||||| |||||||||    
T  33211293 taacttcatcaagctcac 33211310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 445 - 528
Target Start/End: Original strand, 5409078 - 5409162
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaa 528  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5409078 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa 5409162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 2171532 - 2171644
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    |||    
T  2171532 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaa--gggtt 2171629  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  2171630 acaagaaattagctt 2171644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 30834545 - 30834649
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   ||||||||||||    
T  30834545 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggttacaagaaat 30834643  T
Q  544 tagctt 549  Q
    ||||||    
T  30834644 tagctt 30834649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 465 - 549
Target Start/End: Original strand, 33160381 - 33160465
Alignment:
Q  465 tactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  33160381 tactctggaggagagattgatctctccaatccaccatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctt 33160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 412270 - 412158
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||||  |||    
T  412270 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatgagttcttacaaaagagatacaaaaagagt 412171  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  412170 tacaagaaattag 412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 3072759 - 3072871
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||  |||    
T  3072759 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaaagagt 3072858  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  3072859 tacaagaaattag 3072871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 3038927 - 3039028
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccacta-taatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||||||||||||||||||||| |||||    
T  3038927 tgacctaatctgggggagagattaatctctccaatccactattaaagagttcttacaaagagatac-aaatgggttacaagaaattagcttcaaaaagct 3039025  T
Q  559 cac 561  Q
    |||    
T  3039026 cac 3039028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 16452329 - 16452442
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||  |||   |||    
T  16452329 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatatgaaa-gggtt 16452427  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  16452428 acaagaaattagctt 16452442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 328 - 526
Target Start/End: Complemental strand, 9572868 - 9572667
Alignment:
Q  328 aacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaaca 427  Q
    ||||| |||||||||||| |||||||| |||||||||||||| ||||||||| || ||||| ||| | |||||         ||||||||||||||||||    
T  9572868 aacaataatctagatctaatctagaaaccaagtgcatagaaataccacaatcgaatcaaagaatagataagataaagacacgagagaaaagataacaaca 9572769  T
Q  428 ccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatac 524  Q
     ||||||||  || | | |||||| | |||  ||||||||||||  || |||||||||||||| ||||||||||| |||| |||||| |||||||| |||    
T  9572768 tcaagaaatattttacccagttcgtttcaatgatgacctactctaaagtagagattgatctctgcaatccactatcaatgggttcttaacaaagagttac 9572669  T
Q  525 aa 526  Q
    ||    
T  9572668 aa 9572667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 6097451 - 6097533
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6097451 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaa 6097533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 518
Target Start/End: Complemental strand, 16569180 - 16569107
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 518  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16569180 agttcggtccaact-tgacctaatctggaggagagattgatctctccaatccactatcaatgagttcttacaaag 16569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 27692588 - 27692746
Alignment:
Q  61 atggttcagattacagattcactaatttagtttccatccatctcagctatggatttaaatcggatggactagattggtgctgttatttctgggaatccat 160  Q
    |||||||||||||||||| ||| ||||  |||| || |||||||| |  | ||||||||||     ||||| |||||||| |||| | ||||||||||||    
T  27692588 atggttcagattacagatacacgaattcggttttcaaccatctcaaccgtagatttaaatc----agactaaattggtgcagttactactgggaatccat 27692683  T
Q  161 ttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 221  Q
    |||||||||||||||||| |||  ||||| | || ||||  ||||||||||||||||||||||    
T  27692684 ttccatatcaactccatgaaaaacactaataaatagactaaaagaattatcccacatcatgta 27692746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 4045566 - 4045467
Alignment:
Q  462 acctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    ||||||| ||| | ||| |||||||||||||||||||||| |||||||| || ||||||||||| ||||| | |||||||||||||||||||||||||||    
T  4045566 acctactttggggtagaaattgatctctccaatccactatcaatgagttatttacaaagagatataaaatga-ttacaagaaattagcttcaacaagctc 4045468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 16578518 - 16578632
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16578518 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16578615  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  16578616 ttacaagaaattagctt 16578632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 16616862 - 16616748
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16616862 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16616765  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  16616764 ttacaagaaattagctt 16616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 16653280 - 16653166
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16653280 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16653183  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  16653182 ttacaagaaattagctt 16653166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 27707397 - 27707517
Alignment:
Q  54 tgataggatggttcagattacagattcactaatttagtttccatccatctcagctatggatttaaatcggatggactagattggtgctgttatttctggg 153  Q
    |||| |||||||||||||||||||| ||||||||  |||| || |||||||| |  |  ||||||||| ||    ||| |||||||| |||| | |||||    
T  27707397 tgatcggatggttcagattacagatacactaattcggttttcaaccatctcaaccgtatatttaaatcaga----ctaaattggtgcagttactactggg 27707492  T
Q  154 aatccatttccatatcaactccatg 178  Q
    |||||||||||||||||||||||||    
T  27707493 aatccatttccatatcaactccatg 27707517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 16555037 - 16554923
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   ||||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16555037 tgttcacccagttcggtccaaacttgacctactttggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16554940  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  16554939 ttacaagaaattagctt 16554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 16631593 - 16631479
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   ||||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  16631593 tgttcacccagttcggtccaaacttgacctactttggaggagagtttgcactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 16631496  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  16631495 ttacaagaaattagctt 16631479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 25073748 - 25073611
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 522  Q
    ||||||||||||||| | ||||||  ||| |||||| ||||| | || | ||||||||||| |||| |||||||||| ||||||||| ||||| ||||||    
T  25073748 acaccaagaaatgtttacctagtttagtctaacaataacctaatttgaatgagagattgatttctctaatccactatcaatgagttctttacatagagat 25073649  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||   ||||||| ||| |||||| |||||||||||    
T  25073648 acaaaa-gggttacaataaaatagctttaacaagctcac 25073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 27648028 - 27647915
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||| |||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  27648028 tgttcacccagttcggtccaaacttgatctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 27647931  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  27647930 tacaagaaattagctt 27647915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 25421474 - 25421396
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25421474 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25421396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 27533398 - 27533471
Alignment:
Q  150 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 221  Q
    ||||||||||||||||||||||||||||| |||  ||||| | || ||||  ||||||||||||||||||||||    
T  27533398 tgggaatccatttccatatcaactccatgaaaaacactaataaatagactaaaagaattatcccacatcatgta 27533471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 17757948 - 17757903
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  17757948 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 17757903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 17762853 - 17762808
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  17762853 ctcacccaagttgctcccaaaagactctccactcatgtgtttccca 17762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 6027415 - 6027337
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   |||| |||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  6027415 tgttcacccagttcggtccaaacttgacatactctggaggagagattgtactctccaatccactatcaaatgagttctt 6027337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 13154074 - 13154005
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  13154074 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 13154005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 27594798 - 27594871
Alignment:
Q  150 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 221  Q
    |||||||||||||||||||||||| |||| |||  ||||| | || ||||  ||||||||||||||||||||||    
T  27594798 tgggaatccatttccatatcaactacatgaaaaacactaataaatagactaaaagaattatcccacatcatgta 27594871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 27726274 - 27726352
Alignment:
Q  59 ggatggttcagattacagattcactaatttagtttccatccatctcagctatggatttaaatcggatggactagattgg 137  Q
    |||||||||||||||||||| ||||||||  |||| || |||||||| | || |||||||||| ||  |||||||||||    
T  27726274 ggatggttcagattacagatacactaattcggttttcaaccatctcaaccatagatttaaatcagacagactagattgg 27726352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 27726350 - 27726423
Alignment:
Q  150 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 221  Q
    ||||||||||||||||||||||||||||| |||  ||||| | || | ||  ||||||||||||||||||||||    
T  27726350 tgggaatccatttccatatcaactccatgaaaaacactaataaatagtctaaaagaattatcccacatcatgta 27726423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 33342114 - 33342183
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  33342114 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 33342183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 34165017 - 34164948
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  34165017 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 34164948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 3809012 - 3809057
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  3809012 ctcacccaagttgctcacaaatgactctccactcatgtgtttccca 3809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 5043491 - 5043446
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  5043491 ctcacccaaattgctcacaaaagactctccactcatgtgtttccca 5043446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 27614247 - 27614411
Alignment:
Q  54 tgataggatggttcagattacagattcactaatttagtttccatccatctcagctatggatttaaatcggatggactagattggtgctgttatttctggg 153  Q
    |||| ||| |||||| |||||| || ||||||||| |||| || ||||||||| | | |||||||||   |  ||||||| ||||||  ||| |  ||||    
T  27614247 tgatcggaaggttcaaattacatatacactaatttggtttacaaccatctcagttgtagatttaaataaaacagactagactggtgcaattactagtggg 27614346  T
Q  154 aatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatc 216  Q
    ||||||||||||||||||||  ||| |||  ||||| | || ||||  |||||||||||||||||    
T  27614347 aatccatttccatatcaactaaatgaaaaacactaataaatagactaaaagaattatcccacatc 27614411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 436 - 501
Target Start/End: Complemental strand, 34167248 - 34167183
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 501  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||    
T  34167248 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactat 34167183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 603384 - 603429
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||| ||||||||||||||||||||    
T  603384 ctcacccaagttgctcacaaaggacactccactcatgtgtttccca 603429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 480
Target Start/End: Complemental strand, 4641134 - 4641090
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagaga 480  Q
    |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  4641134 tgtttatccagttcggtccaataatgacctactctagaggagaga 4641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 221 - 561
Target Start/End: Original strand, 8359103 - 8359442
Alignment:
Q  221 atgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 319  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||   ||    
T  8359103 atgttgtgaattcggtctcaaattccaaacctcacaccaatgaaatttagattcgtggagcaagtatcaatggcaaccaacaatcaaaagtaaat---ca 8359199  T
Q  320 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 419  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||    
T  8359200 caagcaacaacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataatgagagtagagaaaaga 8359299  T
Q  420 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 518  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8359300 taacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaag 8359399  T
Q  519 agatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||  ||||||||||||||| || |||||||||||    
T  8359400 agatacaaaatgggttacaagaaattagtttaaacaagctcac 8359442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 2390667 - 2390325
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  2390667 tgttgtgaattcggattcaaatccaaacctcacatcaatgaaatttagattagtggagcaagtatcaatgacaaccaataaccaaatgtaaataaccaca 2390568  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---ag 418  Q
    | |||||||||||||||||||||| |||||||||||| || |||| |||||||||||| ||| ||||||||||||||||       |||||||||   |     
T  2390567 atcaataacaacaatctagatctaatctagaaaacaaatgtatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtagagaaaaataa 2390468  T
Q  419 ataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactata-atgagttcttacaa 516  Q
    | ||||||||||||| | | |||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  2390467 acaacaacaccaagagattattcacctagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatatatgagttattacaa 2390369  T
Q  517 agagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||    
T  2390368 agagatac-aaatgggttacaagaaattagcttcaacaagctcac 2390325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 3259372 - 3259038
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    |||||||||||||| ||||||||| ||    || |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||    
T  3259372 tgttgtgaattcggtctcaaattccaa----acctcaatgaactttagattcggggagcaagtatcaatgacaaccaataaccaaatgtaaataaccaca 3259277  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 421  Q
    |||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||    
T  3259276 agcaataacaacaatctagatctaatctagaaaacacgggcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagata 3259177  T
Q  422 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagag 520  Q
    ||||||||| |||||||||| | |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  3259176 acaacaccaggaaatgttcacccagttcggttcaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgggtttttacaaagag 3259078  T
Q  521 atacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||| |||| |||||||| |||||||||| |||||||||||    
T  3259077 atac-aaatgagttacaataaattagcttaaacaagctcac 3259038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 29609113 - 29608780
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||| |||||||| | |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||       |||||||| |||||    
T  29609113 tgttatgaattcgaattcaaattccaaacctcacattaatgaaatttagattcgtggagcaagtatcaatgacaaccaa-------atgtaaataaccac 29609021  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcata-gaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 419  Q
    |||||| |||||||||||||||||| | |||||| ||||||||||  |||||||||||||||| |||||||||||||||||       ||||||||||||    
T  29609020 aagcaacaacaacaatctagatctaatatagaaaccaagtgcatatcaaaaaccacaatctaagcaaaggataaacaagataaagagagtagagaaaaga 29608921  T
Q  420 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaag 518  Q
    ||||||||||||||||| ||||   |||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  29608920 taacaacaccaagaaatattcactcagttcggtccaac-ttgacctactctggaggagtgattgatatctccaatccactatcaatgagttcttacaaag 29608822  T
Q  519 agatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  29608821 agatac-aaatgagttacaagaaattagcttcaacaagctcac 29608780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 274 - 555
Target Start/End: Original strand, 34310552 - 34310835
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatt-accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 372  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||    
T  34310552 gtggagcaagtatcaatgacaaccaataaccaaatgtaaatagaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaac 34310651  T
Q  373 cacaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    ||||||  |||||||||| ||||||||||       ||| ||||||||||||||||||||  | |||||| | ||||||||||||   ||||||||||||    
T  34310652 cacaattcaaccaaaggaataaacaagataaagagagtaaagaaaagataacaacaccaaagattgttcacccagttcggtccaaacttgacctactctg 34310751  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaa 555  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||||||||||||||    
T  34310752 gaggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgtgttacaagaaattagcttcaacaa 34310835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 278 - 561
Target Start/End: Original strand, 4508548 - 4508831
Alignment:
Q  278 agcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccaca 376  Q
    |||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||    
T  4508548 agcaagtatcaatgccaaccaataaccaaatataaataaaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccaca 4508647  T
Q  377 atctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggagga 476  Q
    ||  ||||||||||||||||||||       ||| |||||| ||||||||||||||||||||||| | |||||||||||||  | |||||||||| || |    
T  4508648 attcaaccaaaggataaacaagataaagagagtaaagaaaatataacaacaccaagaaatgttcacccagttcggtccaac-ttaacctactctgaagaa 4508746  T
Q  477 gagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||    
T  4508747 gagattgatctctccaatccactctcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaataagctcac 4508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 4510386 - 4510673
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 372  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||     
T  4510386 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctataaatcaagtgcatagcaaaaa 4510485  T
Q  373 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    ||||||  ||| || |||||||||||||       ||| |||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||      
T  4510486 cacaattcaactaatggataaacaagatcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaac-ttgacctactctac 4510584  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| |||||||||| ||||  ||||||||||||||||||||| || |||||    
T  4510585 aggagagattgatttcttcaatccactatcaatgagttcttataaagagatac-aaatgggttacaagaaattagcttcaataaactcac 4510673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 4512228 - 4512515
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 372  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||     
T  4512228 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctataaatcaagtgcatagcaaaaa 4512327  T
Q  373 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    ||||||  ||| || |||||||||||||       ||| |||||||||||||||||||||||||||||| | ||| |||||||||  |||||||||||      
T  4512328 cacaattcaactaatggataaacaagatcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaac-ttgacctactctac 4512426  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| |||||||||| ||||  ||||||||||||||||||||| || |||||    
T  4512427 aggagagattgatttcttcaatccactatcaatgagttcttataaagagatac-aaatgggttacaagaaattagcttcaataaactcac 4512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 222 - 561
Target Start/End: Original strand, 22328183 - 22328516
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    ||||||||||||||  |||| | |||| |||||||||||||||||||||||||||||| |||||| |||| |||| |||||  |||     || |||| |    
T  22328183 tgttgtgaattcgg--tcaattccaaatctcacatcaatgaaatttagattcgtggagtaagtattaatgacaacaaataattaaa-----ataaccaga 22328275  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 421  Q
    |  || || ||||||||||||||| || ||||| ||||||||||  |||||||||||| ||| |||| |||||||||||       ||||||||||||||    
T  22328276 aataacaaaaacaatctagatctaatcgagaaaccaagtgcataacaaaaccacaatcgaacaaaagaataaacaagataaagagagtagagaaaagata 22328375  T
Q  422 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaaga 519  Q
    |||||||||| |||| || | | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| || ||| ||||||    
T  22328376 acaacaccaaaaaatatttacccagttcggtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaaga 22328475  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  22328476 gatacaaaa-gagttacaagaaattagcttcaacaagctcac 22328516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 32357897 - 32358179
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||| ||||||||||| ||||||| ||||||| |||||   |||||||||| ||||| ||| |||| ||||| || ||  ||| ||||||  ||||||    
T  32357897 gtggagtaagtatcaatgacaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctagtttataatccaattgcataacaaaacc 32357992  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 473  Q
    |||||  || ||| | ||||||||| |       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||||    
T  32357993 acaattcaagcaaggaataaacaagttaaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctgga 32358091  T
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  32358092 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 32358179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 220 - 561
Target Start/End: Original strand, 48599121 - 48599459
Alignment:
Q  220 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 319  Q
    |||||| |||||| || ||||| | | ||| | |||||||| |||||||||||||||||||||||||||||| |||||||  |  |||||| ||   |||    
T  48599121 tatgttttgaatttggtctcaattccgaactttacatcaataaaatttagattcgtggagcaagtatcaatgacaaccaaacaaaaaatgttaa---cca 48599217  T
Q  320 caagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa 417  Q
    ||| ||| ||||| ||| ||  || |||||||| ||  |||||||| || ||||| |||||| |||||| | |||||||||||       ||| ||||||    
T  48599218 caaacaacaacaataatatatagacctagtctataat-caagtgcacagcaaaactacaatccaaccaaggaataaacaagataaagagagtaaagaaaa 48599316  T
Q  418 gataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaa 516  Q
    |||||||||| ||||||||||||| | |||||||||||||  ||| || ||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  48599317 gataacaacatcaagaaatgttcacccagttcggtccaact-tgatctgctctggaggagagattgatctctccaatccactatcaatgagctcttccaa 48599415  T
Q  517 agagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  48599416 agagatac-aaatgagttacaagaaattagcttcaacaagctcac 48599459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 274 - 562
Target Start/End: Original strand, 6359792 - 6360078
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||| |||||| ||||||| |||||   |||||||||| ||||| ||| || | |||||||| ||| ||||||||||| ||||||    
T  6359792 gtggagcaagtatcaatgggaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatatacctagtctataaaccaagtgcatagcaaaacc 6359887  T
Q  374 acaatctaaccaaagga-taaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactct 470  Q
    |||||| |||  ||||| ||||||||||       | | | |||||||||||||||||||||||| ||| | | |||||| ||||||  ||||||| | |    
T  6359888 acaatccaacttaaggaataaacaagataaagaaagcaaatgaaaagataacaacaccaagaaattgttgacccagttcgatccaact-tgacctaatat 6359986  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcacc 562  Q
    || | |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  6359987 ggggaagagattgatctctccaatcaactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcacc 6360078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 22270151 - 22270016
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||| ||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22270151 acaccaagagatgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatcagttcttacaaagagata 22270053  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | ||||  ||||||||||||||||||||||||||||||    
T  22270052 c-aaatgggttacaagaaattagcttcaacaagctcac 22270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 2360819 - 2361097
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||||||||||| ||||||| ||||||   ||||||||| |||| |||| |||| |||||||||||| ||||||||||  ||||||    
T  2360819 gtggagcaagtatcaatggcaaccaacaaccaaa-gtaaat---cacaagcaacaacatcaatatagacctagtctagaaaccaagtgcatatcaaaacc 2360914  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 473  Q
    |||||  |||||| | |||||||||||        || |||||||| |    ||||||    | || | | |||||||| ||||  ||||||| |||||     
T  2360915 acaattcaaccaaggaataaacaagataaagagaataaagaaaagaca----caccaaaggttattgacccagttcggttcaact-tgacctaatctggg 2361009  T
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  2361010 ggagagattgatatctcaaatccactatcaatgagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaagctcac 2361097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 23555208 - 23555083
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | |||    
T  23555208 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagaggtacaaaagt-gtt 23555110  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||| ||||    
T  23555109 acaagaaattagcttcaacaagttcac 23555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 6432129 - 6432014
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  6432129 agttcggtccaact-tgacctactctgaaggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaat 6432032  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  6432031 tagcttcaacaagctcac 6432014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 19502322 - 19502221
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||  |||||||    
T  19502322 tgacttactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctttgacaagct 19502224  T
Q  559 cac 561  Q
    |||    
T  19502223 cac 19502221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 30024733 - 30024857
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||| ||| |||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||    
T  30024733 tgttgatccagttcggtccaact-tgacctactctgggggagtgattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggtt 30024830  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||    
T  30024831 acaagaaattagcttcaacaagctcac 30024857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 23565085 - 23565186
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  23565085 tgacctactctaggagagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagtttcaacaagct 23565183  T
Q  559 cac 561  Q
    |||    
T  23565184 cac 23565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 31519081 - 31518946
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggag-gagagattgatctctccaatccactat-aatgagttcttacaaagagat 522  Q
    ||||||||||||||| ||| |||||||||||||  ||||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  31519081 acaccaagaaatgtttatccagttcggtccaact-tgacctactctggggagagagattgatctctccaatccactgtcaatgagttcttacaaagagat 31518983  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    || |||| ||||||||| || ||||||||| ||||||||    
T  31518982 ac-aaatgagttacaag-aactagcttcaataagctcac 31518946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 35854082 - 35853969
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||    
T  35854082 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 35853984  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  35853983 acaagaaattagctt 35853969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 27347975 - 27347860
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  27347975 agttcggtccaact-tgacctaatctgggggagagattgatctctgcaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 27347878  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  27347877 tagcttcaacaagttcac 27347860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 427 - 561
Target Start/End: Original strand, 31105385 - 31105518
Alignment:
Q  427 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 525  Q
    ||||||||||||| | | |||||||||||||  ||| ||||||| | ||||||||| ||||||||||||||| || |||||||||||||||| |||||||    
T  31105385 accaagaaatgtttacccagttcggtccaact-tgatctactcttggggagagatttatctctccaatccaccatcaatgagttcttacaaaaagataca 31105483  T
Q  526 aaattagttacaagaaattagcttcaacaagctcac 561  Q
    || |  ||||||||||||||||||||||||||||||    
T  31105484 aa-tgggttacaagaaattagcttcaacaagctcac 31105518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 29991221 - 29991108
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||   |||    
T  29991221 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttattagaaagagatacaaaa-gggtt 29991123  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  29991122 acaagaaattagctt 29991108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 48491723 - 48491622
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||| |    
T  48491723 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttctttcaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 48491625  T
Q  559 cac 561  Q
    |||    
T  48491624 cac 48491622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 2759207 - 2759322
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||    
T  2759207 agttcggtccaact-tgacctaatctggggaagagattgatatctccaatccactatcaatgagttcttacaaagagatataaa-tgagttacaagaaat 2759304  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  2759305 tagcttcaacaagttcac 2759322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 557
Target Start/End: Complemental strand, 25616012 - 25615900
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||| ||||  ||||||||||||    
T  25616012 agttcggtccaaacttgacctactctggaggagagattgatctctctaatccactatcaatgagttcttacaaaatgatac-aaatgggttacaagaaat 25615914  T
Q  544 tagcttcaacaagc 557  Q
    |||||| |||||||    
T  25615913 tagcttaaacaagc 25615900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 31732979 - 31733094
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  31732979 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccagtatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 31733076  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||||| |||||||||    
T  31733077 tagcttcaccaagctcac 31733094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 39731537 - 39731426
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  39731537 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 39731439  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  39731438 tacaagaaattag 39731426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 474 - 561
Target Start/End: Original strand, 47673981 - 47674068
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||    
T  47673981 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagttcac 47674068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 445 - 556
Target Start/End: Complemental strand, 48489589 - 48489479
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||  ||||||||||||    
T  48489589 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatgaatgagttattgcaaagagatac-aaatgggttacaagaaat 48489492  T
Q  544 tagcttcaacaag 556  Q
    |||||||||||||    
T  48489491 tagcttcaacaag 48489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 36146416 - 36146532
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||| ||||    
T  36146416 ctagttcggtccaact-tgacctaatatgggggagagattgatctctcaaatccactatcaatgagttcttacaaagagatac-aaatgggttac-agaa 36146512  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||||||||||||    
T  36146513 attagcttcaacaagctcac 36146532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 496007 - 496108
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||| | | |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||||    
T  496007 tgacctactataggggagagattgatctctccaatccactatcaatgagttcttataaagagatac-aaatgggttgcaagaaattagcttcaacaagct 496105  T
Q  559 cac 561  Q
    |||    
T  496106 cac 496108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 1113801 - 1113700
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| | ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||| ||||||||||||||||||||||    
T  1113801 tgacctaatatgggggagagattgatctctccaatctactatcaatgagttcttacaaagagatacaaa-tgggttataagaaattagcttcaacaagct 1113703  T
Q  559 cac 561  Q
    |||    
T  1113702 cac 1113700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 4253518 - 4253654
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 522  Q
    ||||||||||||||| | |||||||||||||| | ||||||||||||  ||||||||||||||||| |||||| ||| ||||||||| || |||||||||    
T  4253518 acaccaagaaatgtttacctagttcggtccaa-attgacctactctgtgggagagattgatctctctaatccattatcaatgagttctttccaaagagat 4253616  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | ||||   |||||| |||||||||||||||||||||||    
T  4253617 ataaaa-gggttacatgaaattagcttcaacaagctcac 4253654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 549
Target Start/End: Complemental strand, 8153486 - 8153397
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||    
T  8153486 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttattacaaagagatac-aaatgagttacaagaaattagctt 8153397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 549
Target Start/End: Original strand, 25766984 - 25767074
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||   ||||||||||||||||||    
T  25766984 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttcaaaagagatacaaaaggggttacaagaaattagctt 25767074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 14069843 - 14069946
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  14069843 agttcggtccaact-tgacctaatcttggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 14069940  T
Q  544 tagctt 549  Q
    ||||||    
T  14069941 tagctt 14069946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 14379871 - 14379974
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  14379871 agttcggtccaact-tgacctaatctaggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 14379968  T
Q  544 tagctt 549  Q
    ||||||    
T  14379969 tagctt 14379974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 41317444 - 41317559
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||   |||||||||||    
T  41317444 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatggattacaagaaat 41317541  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||  ||||||||||    
T  41317542 tagctttgacaagctcac 41317559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 4586291 - 4586204
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||||||| ||||    
T  4586291 ggagagattgatctctccaatccactatcaatgagttcttacaaagagata-aaaatgggttacaaaaaattagcttcaacaagttcac 4586204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 26417446 - 26417359
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||    
T  26417446 ggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattatcttcaacaagctcac 26417359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 555
Target Start/End: Original strand, 47676137 - 47676255
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||| ||| |||||||||||||  ||||||| | ||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||  |||    
T  47676137 tgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccattccactatcattgagttcttacaaagagatac-aaatgggtt 47676234  T
Q  535 acaagaaattagcttcaacaa 555  Q
    |||||||||||||||||||||    
T  47676235 acaagaaattagcttcaacaa 47676255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 18126788 - 18126687
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| ||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||| |    
T  18126788 tgacctagtctgggggagagattgattcctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttgaacaagtt 18126690  T
Q  559 cac 561  Q
    |||    
T  18126689 cac 18126687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 41649021 - 41649135
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  41649021 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 41649118  T
Q  544 tagcttcaacaagctcac 561  Q
    |||| | |||||||||||    
T  41649119 tagc-taaacaagctcac 41649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 43864402 - 43864287
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| |||||  ||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||  |||||| |||||    
T  43864402 agttcggtccaact-tgacctaatctgggagagagattgatctctccaatccactatcaattagtttttacaaagagatac-aaatgggttacaggaaat 43864305  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  43864304 tagcttcaacaagttcac 43864287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 43504178 - 43504266
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattag 546  Q
    ||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||    
T  43504178 tgacctactatggaggagagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattag 43504266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 20344064 - 20343951
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | |||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  20344064 tgttcacccagttcggtccaact-tgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 20343968  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  20343967 ttacaagaaattagctt 20343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 23344151 - 23344018
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||||| | || ||||||||||||  |||||||||||||  |||||||| || ||||||||| | ||| |||||||||| ||||||| |||    
T  23344151 acaccaagaaatgtttaccttgttcggtccaact-tgacctactctgg--gagagattaatttctccaatctattatcaatgagttctcacaaagatata 23344055  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | |||   ||||||||||||||||||||||||||||||    
T  23344054 ctaaagg-gttacaagaaattagcttcaacaagctcac 23344018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 445 - 555
Target Start/End: Complemental strand, 18396477 - 18396367
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 542  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||| ||||| ||| ||| |||||||||||||||  ||||||| |||    
T  18396477 agttcggtccaccattgacctactcttgaggagagattgatctctccaatcctctatcaatgaattctttataaagagatacaaaat--gttacaaaaaa 18396380  T
Q  543 ttagcttcaacaa 555  Q
     ||| ||||||||    
T  18396379 ataggttcaacaa 18396367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 527
Target Start/End: Original strand, 24525526 - 24525594
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 527  Q
    ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24525526 tgacctaatcttggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa 24525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 549
Target Start/End: Complemental strand, 48408984 - 48408857
Alignment:
Q  425 acaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagaga 521  Q
    |||||||||||| ||||| | ||||||||| ||   |||| |||||||||||||||||| | |||||||||||||||| |||||||| || | |||||||    
T  48408984 acaccaagaaattgttcacccagttcggtctaaacttgacatactctggaggagagattaaactctccaatccactatcaatgagttatttcaaaagaga 48408885  T
Q  522 tacaaaattagttacaagaaattagctt 549  Q
    |||||||   ||||||||||||||||||    
T  48408884 tacaaaaggggttacaagaaattagctt 48408857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 445 - 545
Target Start/End: Original strand, 3904626 - 3904726
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 542  Q
    |||||||||||||||||||||||||||  |||||||||||||||||  || |||||| ||||||||| |||||||||||| ||||| | |||||||||||    
T  3904626 agttcggtccaacaatgacctactctgagggagagattgatctctctgat-cactatcaatgagttctttacaaagagatgcaaaagt-gttacaagaaa 3904723  T
Q  543 tta 545  Q
    |||    
T  3904724 tta 3904726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 38671232 - 38671347
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| ||| ||||| |||||| ||||||||||| ||||||||||||||||| ||||| ||||  ||||||| ||||    
T  38671232 agttcggtccaact-tgacctattttgggggatagatttatctcttcaatccactatcaatgagttcttacaaagtgatac-aaatgtgttacaataaat 38671329  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  38671330 tagcttaaacaagctcac 38671347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 24790009 - 24789896
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   |||||||||||||||||||||| |  |||||||||||||||| || ||||| |||| |||| ||||||||||  ||    
T  24790009 tgttcacccagttcggtccaaacttgacctactctggaggagagatagtactctccaatccactatcaaagagtttttacaaaagggatacaaaat--gt 24789912  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  24789911 tacaagaaattagctt 24789896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 445 - 517
Target Start/End: Original strand, 1560675 - 1560749
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 517  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  1560675 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 1560749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 549
Target Start/End: Complemental strand, 4178917 - 4178829
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||| |||||||||||||||||| || | ||||||||||| ||||||||||| |||||||||||||||   ||||||||||||||||||    
T  4178917 tgacctgctctggaggagagattgaactgttcaatccactatcaatgagttctt-caaagagatacaaaa-gggttacaagaaattagctt 4178829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 429 - 561
Target Start/End: Original strand, 36574510 - 36574641
Alignment:
Q  429 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaa 526  Q
    ||||||||||| | | |||| ||||||| | ||||||||||| | |||  ||||||||||||||| ||||||| ||||||||||| ||||||||||| ||    
T  36574510 caagaaatgtttacccagtttggtccaa-attgacctactctag-ggatggattgatctctccaaaccactatcaatgagttctttacaaagagatataa 36574607  T
Q  527 aattagttacaagaaattagcttcaacaagctcac 561  Q
    ||   |||||||||||||||||||||||| |||||    
T  36574608 aagg-gttacaagaaattagcttcaacaaactcac 36574641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 12097875 - 12097984
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaagagatacaaaattagttacaagaaa 542  Q
    |||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||||||| || |||||       |||||||| ||||  |||||||||||    
T  12097875 ctagttcggtccaact-tgacctaatctgggggagagattcatctctccaatccactacaaagagtt-------agagatac-aaatgggttacaagaaa 12097965  T
Q  543 ttagcttcaacaagctcac 561  Q
    ||| |||||||||||||||    
T  12097966 ttaacttcaacaagctcac 12097984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 601
Target Start/End: Complemental strand, 22269837 - 22269793
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccc 601  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  22269837 ctcacccaagtttctctcaatagactctccactcatgtgtttccc 22269793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 18388760 - 18388838
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  18388760 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 18388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 18392196 - 18392274
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  18392196 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 18392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 561
Target Start/End: Complemental strand, 31518896 - 31518838
Alignment:
Q  502 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||    
T  31518896 aatgagttcttacaaagagatac-aaatgagttacaagaaactagcttcaataagctcac 31518838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 32060322 - 32060400
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  32060322 tgttcaccaagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 32060400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 2361275 - 2361320
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  2361275 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 2361320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 29608600 - 29608555
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  29608600 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 29608555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 26639484 - 26639432
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatcca 497  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||| ||||||    
T  26639484 agttcggtacaacaatgacatactatggaggagagattgatctctctaatcca 26639432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 34311020 - 34311068
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  34311020 ctcacccaagttgctcacaaaagactctccactcatgtgttttccatcc 34311068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 5116758 - 5116679
Alignment:
Q  451 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaa 528  Q
    ||||||||||||  | || ||| ||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  5116758 gtccaacaatgatttgctatgggggagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 5116679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 6592340 - 6592418
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6592340 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6592418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 6594558 - 6594636
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6594558 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6594636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 8359622 - 8359667
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||    
T  8359622 ctcatccaagttgctcacaaaagactctccactcatgtgtttccca 8359667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 30814594 - 30814530
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 509  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||    
T  30814594 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagtt 30814530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 600
Target Start/End: Original strand, 4512694 - 4512737
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcc 600  Q
    |||||||||||||||| |||  ||||||||||||||||||||||    
T  4512694 ctcacccaagttgctcacaaatgactctccactcatgtgtttcc 4512737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 2390146 - 2390105
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| ||| ||||| |||||||||||||||    
T  2390146 ctcacccaagttgctcacaaaagactatccactcatgtgttt 2390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 4509010 - 4509055
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||    
T  4509010 ctcaccaaagttgctcacaaatgactctccactcatgtgtttccca 4509055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 4510852 - 4510897
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||    
T  4510852 ctcaccaaagttgctcacaaatgactctccactcatgtgtttccca 4510897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 528
Target Start/End: Original strand, 5513661 - 5513760
Alignment:
Q  429 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 526  Q
    ||||||||||| | | ||||| |||||| | |||||||||||||||| ||||||||| |||||||| || | | ||||||||| ||||||||||||| ||    
T  5513661 caagaaatgtttacccagttcagtccaa-attgacctactctggaggtgagattgat-tctccaattcagtgtcaatgagttctttacaaagagatataa 5513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Original strand, 6360216 - 6360257
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  6360216 ctcacccaagttgctcacaaatgactctccactcatgtgttt 6360257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 6431835 - 6431794
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| ||| ||||||| |||||||||||||    
T  6431835 ctcacccaagttgctcacaaaagactctacactcatgtgttt 6431794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 22270274 - 22270241
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaa 307  Q
    |||||||||||||||||||||||||| |||||||    
T  22270274 gtggagcaagtatcaatggcaaccaacaaccaaa 22270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 30814723 - 30814690
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaa 307  Q
    |||||||||||||||||||||||||| |||||||    
T  30814723 gtggagcaagtatcaatggcaaccaacaaccaaa 30814690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 3258860 - 3258812
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||||||   || ||||||||||||||| ||||||||||||    
T  3258860 ctcacccaagttgctaataaaagactctccactcatatgtttcccatcc 3258812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 100)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 224 - 561
Target Start/End: Complemental strand, 41964794 - 41964458
Alignment:
Q  224 ttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaa 322  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  41964794 ttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaacaatcaaatgtaaataaccacaa 41964695  T
Q  323 gcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataa 422  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||| |||||||||||    
T  41964694 gcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagat--agagagtaaagaaaagataa 41964597  T
Q  423 caacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagaga 521  Q
    ||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  41964596 caacaccaagaaatgctcacccagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaggga 41964498  T
Q  522 tacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||  ||||||| |||||||||| |||||||||||    
T  41964497 tacaaaatgggttacaataaattagcttaaacaagctcac 41964458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 379763 - 379423
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  379763 tgttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcgtggagcaagtatcagtggcaaccaataatcaaatgtaaataaccac 379664  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 420  Q
    || ||| ||||||||| |||| |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||       ||| |||||||||    
T  379663 aaacaacaacaacaatatagacctagtctataaaccaagtgcataacaaaaccacaatctaaccaaaggataaacaagataaagagagtaaagaaaagat 379564  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||     
T  379563 aacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaattagttcttacaaagc 379464  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| ||||  ||||||||||||||||||||||||||||||    
T  379463 gatac-aaatgggttacaagaaattagcttcaacaagctcac 379423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 12073773 - 12073435
Alignment:
Q  222 tgttgtgaattcggactcaaatt-caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||||||  || ||||||  | ||   |||||    
T  12073773 tgttgtgaattcggtctcaaatttcaaacctcacaccaatgaaatttaaatttgtggagcaagtatcaatggcaataaacaaccaa--ggaataaaccac 12073676  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 420  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||| |||||||||||       ||| |||||||||    
T  12073675 aagcaacaacaacaatctagatctaatctagaaaccaagtgcataacaaaaccacaatctaaccaaagaataaacaagataaagagagtaaagaaaagat 12073576  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  12073575 aacaacaccaagaaatgttcacctagttcggtccaacaatgacctactctggaagagagattgatctctccaatccactatcaatgagttcttacaaaga 12073476  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| |||| |||||||| ||||||||||||||||||||||    
T  12073475 gatac-aaatgagttacaataaattagcttcaacaagctcac 12073435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 2210048 - 2209756
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  2210048 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaaacaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 2209949  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 469  Q
    |||||||||||||| ||||||||||||       |||||||||   ||| ||||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  2209948 acaatctaaccaaatgataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactc 2209849  T
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  2209848 tggaggagagattaatctctccaatccactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcac 2209756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 50673686 - 50673972
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||    
T  50673686 gtggagcaagtatcaatgtcaaccaataaccaaatgtaaatcaccataagcaataacaacaatatagatctagtctataat-caagtgcatagcaaaacc 50673784  T
Q  374 acaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    |||||| ||   ||||| ||||||||||       ||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  50673785 acaatccaaagcaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaac-ttgacctactctgg 50673883  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  50673884 aggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 50673972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 222 - 560
Target Start/End: Complemental strand, 35662816 - 35662485
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    ||||||||||||||  |||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||    ||| |    
T  35662816 tgttgtgaattcgg--tcaattccaaacttcacatcaatgaaatttagatttgtggagcaagtatcaatggcaaccaacaaccaaaattaa----ccata 35662723  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 421  Q
    ||||| ||||||||| ||||  ||||||| ||| ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||    
T  35662722 agcaacaacaacaatatagacatagtctataaaccaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagata 35662623  T
Q  422 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagag 520  Q
    |||||||||| ||||||||||  |||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  35662622 acaacaccaaaaaatgttcattcagttcggtccaac-ttgacctactcttgaggagatattgatctctccaatccactatcaatgagttcttacaaagag 35662524  T
Q  521 atacaaaattagttacaagaaattagcttcaacaagctca 560  Q
    |||| |||| ||||||||||||||||||||||||| ||||    
T  35662523 atac-aaatgagttacaagaaattagcttcaacaaactca 35662485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 277 - 561
Target Start/End: Complemental strand, 40632772 - 40632488
Alignment:
Q  277 gagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccac 375  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| | | ||||||||| | ||||||||    
T  40632772 gagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaataacaacaatatagacctagtctatataccaagtgcatggcaaaaccac 40632673  T
Q  376 aatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggagg 475  Q
    |||  ||||||||||||||||||||       ||| | |||||||||||||||||||||||||| | | |||||||||||||  |||| |||| | ||||    
T  40632672 aattcaaccaaaggataaacaagataaagagagtaaaaaaaagataacaacaccaagaaatgtttacccagttcggtccaac-ttgacttactttagagg 40632574  T
Q  476 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  40632573 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaagctcac 40632488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 222 - 559
Target Start/End: Complemental strand, 8665787 - 8665453
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaatt-----a 316  Q
    ||||||||||||||  |||| ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||   |||||     |    
T  8665787 tgttgtgaattcgg--tcaatttcaaacttcacttcaatgaaatttagattcgtcgagcaagtatcaatggcaaccaacaaccaaaa--aaattgattaa 8665692  T
Q  317 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaa 416  Q
    |||||||||| ||||||||| ||| |||| |||| ||  ||| ||||||| |||||||||||| |||||| | |||||||||||       ||| |||||    
T  8665691 ccacaagcaacaacaacaatatag-tcta-tctataat-caaatgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaa 8665595  T
Q  417 agataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca 515  Q
    |||||||||||||||||||||| || |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8665594 agataacaacaccaagaaatgtacacctagtttggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttaca 8665496  T
Q  516 aagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||    
T  8665495 aagagatac-aaatgggttacaagaaattagcttcaacaagctc 8665453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 240 - 561
Target Start/End: Original strand, 26699251 - 26699568
Alignment:
Q  240 aaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta 339  Q
    |||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||     | ||||||||  |  |||||||||||    
T  26699251 aaatccaaacctcacatcaatgaaatttagattcgtgggacaggtatcaatggcaaccaataaccaaat-----taaccacaagacacgacaacaatcta 26699345  T
Q  340 gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgtt 439  Q
    |||||| |||||||  ||||||||||| ||||||| |||  |||||||| |||||||||||       ||| ||||||||||||  ||| ||||||| ||    
T  26699346 gatctaatctagaatccaagtgcatagcaaaaccataattgaaccaaagaataaacaagataaagagagtaaagaaaagataacggcactaagaaatttt 26699445  T
Q  440 catctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttaca 537  Q
     | | ||||||||||||||||||||||||||||   |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||    
T  26699446 tacccagttcggtccaacaatgacctactctgggatagagattgatctctccaatccattataaatgagttctttacaaagagatacaaaa-gagttaca 26699544  T
Q  538 agaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||    
T  26699545 agaaattagcttcaacaagctcac 26699568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 368 - 561
Target Start/End: Complemental strand, 46703737 - 46703543
Alignment:
Q  368 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctac 467  Q
    |||||||||||||||||||| ||||||||||||       ||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||    
T  46703737 aaaaccacaatctaaccaaatgataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtccaacaatgacctac 46703638  T
Q  468 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  46703637 tctggaggagagattgatctctccaatccactataaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcac 46703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 8648526 - 8648182
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaatt-----a 316  Q
    ||||||||||||||  |||| | ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||   |||||     |    
T  8648526 tgttgtgaattcgg--tcaattacaaacttcacttcaatgaaatttagattcgtcgagcaagtatcaatggcaaccaacaaccaaaa--aaattgattaa 8648431  T
Q  317 ccacaagcaataacaacaatcta--gatctagtctaga---aaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtag 411  Q
    |||||||||| ||||||||| ||  || ||||||||     || ||| ||||||| |||||||||||| |||||| | |||||||||||       |||     
T  8648430 ccacaagcaacaacaacaatatatagacctagtctatctataatcaaatgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaa 8648331  T
Q  412 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 510  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  8648330 agaaaagataacaacaccaagaaatgttcacccagtttggtccaact-tgacctactctggaggagagattgatctctccaatccaatatcaatgagttc 8648232  T
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||| ||||  |||| ||||||||||||||||||| |||||    
T  8648231 ttacaaagagatac-aaatgggttataagaaattagcttcaacaaactcac 8648182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 41639754 - 41639469
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca---atctagatctagtctagaaaacaagtgcatagaaaa 370  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||     || |||| |||||||| ||  ||||||||||| |||    
T  41639754 gtggagcaagtatcaatggcaaccaataaccaaatgtaaa---ccacaagcaacaacaaatgatatatagacctagtctataat-caagtgcatagcaaa 41639659  T
Q  371 accacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    ||||||||  ||||||||||||||||||||       ||| ||||| ||||||||||||||||||||||||   |||||||||||||  |||||||||||    
T  41639658 accacaattcaaccaaaggataaacaagataaagagagtaaagaaacgataacaacaccaagaaatgttcactcagttcggtccaact-tgacctactct 41639560  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||  ||||||||||||||||||||| ||| ||||    
T  41639559 ggaggagagattgatctctccaatccactatcgatgagttcttacaaatagatac-aaatgggttacaagaaattagcttcaaaaagttcac 41639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 354 - 561
Target Start/End: Complemental strand, 6656205 - 6655999
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 453  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||       ||| |||||||||||||||||||||||||||||| | | |||||||    
T  6656205 aacaagtgcatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtc 6656106  T
Q  454 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    ||||  |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  6656105 caact-tgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaa 6656008  T
Q  553 caagctcac 561  Q
    |||| ||||    
T  6656007 caagttcac 6655999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 245 - 555
Target Start/End: Complemental strand, 33990199 - 33989893
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatct 344  Q
    |||| |||||| ||||||||| |||||| ||||  |||||||||||||||| |||||||||||     || | ||||||||| |||||||||||||||||    
T  33990199 caaatctcacaccaatgaaatctagatttgtgggacaagtatcaatggcaatcaataaccaaa-----ataaacacaagcaacaacaacaatctagatct 33990105  T
Q  345 agtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatct 444  Q
    | |||||||| ||||||||||| ||| ||| |||  |||||||| |||||||||||       ||||| |||| |||| |||||||||||||||| | |     
T  33990104 aatctagaaaccaagtgcatagcaaatccagaattgaaccaaagaataaacaagataaagagagtagaaaaaatataataacaccaagaaatgtttaccc 33990005  T
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaagagatacaaaattagttacaagaaa 542  Q
    |||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||  | ||||||||||    
T  33990004 agttcaatccaagaatgacctactctggtggagagattgatctctccaatccactattaacgagttatttacaaagagatacaaaagga-ttacaagaaa 33989906  T
Q  543 ttagcttcaacaa 555  Q
    |||||||||||||    
T  33989905 ttagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 258 - 561
Target Start/End: Complemental strand, 12119893 - 12119582
Alignment:
Q  258 aatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaa-------tctagatctagtcta 350  Q
    |||||||||||||||| ||||||||||||||||| |||||  |||| |||    ||| ||||||||||| ||||||||       |||||||||| ||||    
T  12119893 aatgaaatttagattcatggagcaagtatcaatgacaaccggtaacaaaa----aataaccacaagcaacaacaacaacaatcaatctagatctaatcta 12119798  T
Q  351 gaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata----acaacaccaagaaat-gttcatcta 445  Q
    ||||  |||||||||| ||||||||||||  |||||||  ||||||||||       |||||||||| |||    ||||||||||||||| ||||| |||    
T  12119797 gaaactaagtgcatagcaaaaccacaatcggaccaaagactaaacaagataaagagagtagagaaaaaatagatgacaacaccaagaaattgttcaccta 12119698  T
Q  446 gttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||   ||||||||||||    
T  12119697 gttcggtccaacaatgacctactcttg-ggagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaa-gggttacaagaaat 12119600  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||| ||| ||||    
T  12119599 tagcttcaaaaagttcac 12119582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 220 - 561
Target Start/End: Complemental strand, 26364618 - 26364279
Alignment:
Q  220 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaa--tgtaaattac 317  Q
    ||||||||||| ||||  |||| | ||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| ||  |||  ||| || |||    
T  26364618 tatgttgtgaactcgg--tcaattccaaactttacatcaatgaaatttagattcgtggagcaagtatcaatgacaatcaacaataaaaaatgttaactac 26364521  T
Q  318 cacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 415  Q
       |||||| ||||||||| ||  || |||||||| ||   ||||| |||| |||||||||||| || ||| | |||||||||||       ||| ||||    
T  26364520 ---aagcaacaacaacaatatatagacctagtctataatt-aagtgtatagcaaaaccacaatccaagcaaggaataaacaagataaagagagtaaagaa 26364425  T
Q  416 aagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttctta 513  Q
    ||||||||||||||||||||| ||| | | ||||| ||| |||  ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26364424 aagataacaacaccaagaaattgttgacccagttcagtcaaact-tgacctaatctgggggagagattgatctctccaatccactattaatgagttctta 26364326  T
Q  514 caaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  26364325 caaagagatac-aaatgagttacaagaaattagcttcaacaagttcac 26364279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 50262534 - 50262826
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaa 371  Q
    |||||||||||||||||| ||||||| || ||||   || | ||||||||||| ||||||||| ||  || ||||| | | || ||||||||| | ||||    
T  50262534 gtggagcaagtatcaatgacaaccaacaagcaaaaaaaattaaccacaagcaacaacaacaatatatagacctagtat-gtaatcaagtgcatggcaaaa 50262632  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctac 467  Q
    |||||||| ||  || | |||||||||||       ||||||||||   || ||||||||||||| || ||||| | |||||||||||||||||||||||    
T  50262633 ccacaatccaagtaaggaataaacaagataaaaagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaacaatgacctac 50262732  T
Q  468 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  50262733 tctggaggaaagattgatatctccaatcaactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 50262826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 220 - 433
Target Start/End: Original strand, 55085233 - 55085439
Alignment:
Q  220 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 319  Q
    ||||||||||||| ||  |||| | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| || |||||     | || |    
T  55085233 tatgttgtgaatttgg--tcaattccaaacttcacatcaatgaaatttagattcatggagcaagtatcaatgacaaccaacaatcaaat-----taacta 55085325  T
Q  320 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 419  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||    
T  55085326 caagcaataacaacaatctagatctaatttagaaaccaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaaga 55085425  T
Q  420 taacaacaccaaga 433  Q
    ||||||||||||||    
T  55085426 taacaacaccaaga 55085439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 354 - 561
Target Start/End: Original strand, 27416884 - 27417090
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 453  Q
    ||||||||||| | |||||||||||| |||||||| |||||||||||       ||| ||| ||||||||||||||||  | |||| |   |||||||||    
T  27416884 aacaagtgcatggcaaaaccacaatccaaccaaagaataaacaagataaagagagtaaagacaagataacaacaccaaagattgttgactcagttcggtc 27416983  T
Q  454 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    ||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  27416984 caact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtttttacaaagagatac-aaatgggttacaagaaattagcttcaa 27417081  T
Q  553 caagctcac 561  Q
    |||||||||    
T  27417082 caagctcac 27417090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 561
Target Start/End: Complemental strand, 54883210 - 54883063
Alignment:
Q  414 aaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 511  Q
    ||||||||||||||||||||||| ||| | | |||||||||||||  |||| || ||||||||||||||||||| |||||||||||||| ||||||||||    
T  54883210 aaaagataacaacaccaagaaattgttgacccagttcggtccaact-tgacttaatctggaggagagattgatccctccaatccactatcaatgagttct 54883112  T
Q  512 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  54883111 tacaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 54883063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 56178637 - 56178762
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  56178637 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 56178735  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||| ||||    
T  56178736 acaagaaattagcttcaacaagttcac 56178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 224 - 400
Target Start/End: Complemental strand, 46703929 - 46703752
Alignment:
Q  224 ttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaa 322  Q
    ||||||||| || || |||||| |||| ||||||||| ||| ||||||||||||||| ||||||||||  |||||||||||||||||||||| ||| |||    
T  46703929 ttgtgaatttggtcttaaattccaaacttcacatcaaagaa-tttagattcgtggagtaagtatcaataacaaccaataaccaaatgtaaataacctcaa 46703831  T
Q  323 gcaataacaaca--atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 400  Q
    |||| |||||||  || |||| ||| ||||  || ||||||||||| |||||||||||||||||||||||||||||||||    
T  46703830 gcaacaacaacaatatatagacctattcta-taatcaagtgcatagcaaaaccacaatctaaccaaaggataaacaagat 46703752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 368 - 559
Target Start/End: Complemental strand, 33090116 - 33089923
Alignment:
Q  368 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgaccta 466  Q
    |||||||||||| |||||||  |||||||||||       | |||||||||| ||||||  ||| ||| |||| ||||||| |||||||||||| |||||    
T  33090116 aaaaccacaatcgaaccaaaaaataaacaagataaagagagcagagaaaagagaacaacttcaaagaattgtttatctagtccggtccaacaataaccta 33090017  T
Q  467 ctctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||| | |||| || ||||||||||||||||||||    
T  33090016 ctctagaggagagattgatctctctaatccactatcaatgagttctttacagagagatacaaaa-tggttataataaattagcttcaacaagctc 33089923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 48893648 - 48893763
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||    
T  48893648 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgagttacaagaaat 48893745  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  48893746 tagcttcaacaagctcac 48893763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 9927468 - 9927583
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9927468 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9927565  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  9927566 tagcttcaacaagttcac 9927583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 26175646 - 26175761
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  26175646 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 26175743  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| ||||||||||||||    
T  26175744 tagtttcaacaagctcac 26175761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 560
Target Start/End: Complemental strand, 31474329 - 31474195
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||| ||||| | | |||||||||||||  ||| ||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  31474329 acaccaagatatgtttacccagttcggtccaact-tgatctactctggtggagagatttatctctccaatcaactatcaatgagttcttacaaagagata 31474231  T
Q  524 caaaattagttacaagaaattagcttcaacaagctca 560  Q
    |||| | ||||||||||||||||||||||||| ||||    
T  31474230 caaa-tgagttacaagaaattagcttcaacaaactca 31474195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 428 - 561
Target Start/End: Original strand, 37229714 - 37229847
Alignment:
Q  428 ccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaa 526  Q
    |||||||||||| | |||||||||||||||  ||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  37229714 ccaagaaatgtttacctagttcggtccaact-tgacctactatgagggagagattgatctctccaatccactataaatgagttcttacaaagagatataa 37229812  T
Q  527 aattagttacaagaaattagcttcaacaagctcac 561  Q
    ||   ||||||| ||||| |||| |||||||||||    
T  37229813 aaagggttacaacaaatttgctttaacaagctcac 37229847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 48143187 - 48143086
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||   ||||||||||||||||||||||||| |    
T  48143187 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttatgaagagatacaaaa-gggttacaagaaattagcttcaacaagtt 48143089  T
Q  559 cac 561  Q
    |||    
T  48143088 cac 48143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 5429837 - 5429722
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  | ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||    
T  5429837 agttcggtccaact-taacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaatagatac-aaatgggttacaagaaat 5429740  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  5429739 tagcttcaacaagctcac 5429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 6542169 - 6542304
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||||| | | |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  6542169 acaccaagaaatgtttacccagttcggtccaact-tgacctaccctgggggagagattgatctctccaatccactatcaacgagttcttacaaagagata 6542267  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||    | |||||||||||| ||||||||||||||    
T  6542268 caaaa-ggctaacaagaaattagtttcaacaagctcac 6542304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 434 - 549
Target Start/End: Original strand, 29999804 - 29999920
Alignment:
Q  434 aatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaatta 531  Q
    |||||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||  |    
T  29999804 aatgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaa-ga 29999902  T
Q  532 gttacaagaaattagctt 549  Q
    ||||||||||||||||||    
T  29999903 gttacaagaaattagctt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 36463399 - 36463514
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||| | || |||||||||||||||||||| ||||  ||||||||||||    
T  36463399 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactgtcaaagagttcttacaaagagatac-aaatgggttacaagaaat 36463496  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  36463497 tagcttcaacaagctcac 36463514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 37740783 - 37740668
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  37740783 agttcggtccaact-tgaccaaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 37740686  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  37740685 tagcttcaacaagttcac 37740668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 46147401 - 46147516
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||| ||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||    
T  46147401 agttcggtccaact-tgacctaatttgggggagagattgatgtctccaatccactatcaaagagttcttacaaagagatacaaa-tgagttacaagaaat 46147498  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  46147499 tagcttcaacaagctcac 46147516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 13992293 - 13992402
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| ||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||  ||||    
T  13992293 tgttcacctagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttac-aagagatacaaaa-gagtt 13992390  T
Q  535 acaagaaattag 546  Q
    ||||||||||||    
T  13992391 acaagaaattag 13992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 47038421 - 47038535
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||  |  |||||||||||    
T  47038421 agttcggtccaact-tgacttactctgggggagagattgatctctccaatccactatcaatgagtccttacaaacagatacaaa--tgattacaagaaat 47038517  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  47038518 tagcttcaacaagctcac 47038535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 5370092 - 5370196
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||   ||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  5370092 agttcggtccaaacttgacctactctggaggagagattgatctctctagtccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaat 5370190  T
Q  544 tagctt 549  Q
    ||||||    
T  5370191 tagctt 5370196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 36994682 - 36994567
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||| ||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |  ||||||||||||    
T  36994682 agttcggtccaact-tgatctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatacaaa-tgggttacaagaaat 36994585  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  36994584 tagcttcaacaagctcac 36994567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 31495316 - 31495428
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||  |||    
T  31495316 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatcaactatcaatgagttcttacaaaagagatacaaaaagagt 31495415  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  31495416 tacaagaaattag 31495428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 462 - 561
Target Start/End: Original strand, 34570440 - 34570539
Alignment:
Q  462 acctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctca 560  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |  ||||||||||||||||||||||||| |||    
T  34570440 acctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aattgggttacaagaaattagcttcaacaagttca 34570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 558
Target Start/End: Complemental strand, 4588137 - 4588005
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    |||||| |||||||| | | |||| ||||||||  | ||||| | ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4588137 acaccatgaaatgtttacccagtttggtccaact-tcacctattatgggggagagattgttctctccaatccactatcaatgagttcttacaaagagata 4588039  T
Q  524 caaaattagttacaagaaattagcttcaacaagct 558  Q
    |||||   |||||||||||||||||||||||||||    
T  4588038 caaaagg-gttacaagaaattagcttcaacaagct 4588005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 555
Target Start/End: Original strand, 22882740 - 22882870
Alignment:
Q  424 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagaga 521  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |  || ||||||||| |||| |||||||||  ||||||||| |||| ||||||    
T  22882740 aacaccaagaaatgtttatccagttcggtccaacaatgacctactccg--ggggagattgatttctctaatccactaccaatgagttctttacgaagaga 22882837  T
Q  522 tacaaaattagttacaagaaattagcttcaacaa 555  Q
    |||||||   ||||||||||||||||||||||||    
T  22882838 tacaaaa-gggttacaagaaattagcttcaacaa 22882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 555
Target Start/End: Original strand, 22934404 - 22934534
Alignment:
Q  424 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagaga 521  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |  || ||||||||| |||| |||||||||  ||||||||| |||| ||||||    
T  22934404 aacaccaagaaatgtttatccagttcggtccaacaatgacctactccg--ggggagattgatttctctaatccactaccaatgagttctttacgaagaga 22934501  T
Q  522 tacaaaattagttacaagaaattagcttcaacaa 555  Q
    |||||||   ||||||||||||||||||||||||    
T  22934502 tacaaaa-gggttacaagaaattagcttcaacaa 22934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 12743935 - 12744038
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  12743935 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 12744032  T
Q  544 tagctt 549  Q
    ||||||    
T  12744033 tagctt 12744038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 12745324 - 12745427
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  12745324 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 12745421  T
Q  544 tagctt 549  Q
    ||||||    
T  12745422 tagctt 12745427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 549
Target Start/End: Original strand, 52095352 - 52095475
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||| || |||||| | ||||||||||||   || ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||    
T  52095352 acaccaaaaattgttcacccagttcggtccaaacttg-cctactctggaggagagattgatctctccaatccactatcaaagatttcttacaaagagata 52095450  T
Q  524 caaaattagttacaagaaattagctt 549  Q
    | ||||  ||||||||||||||||||    
T  52095451 c-aaatgggttacaagaaattagctt 52095475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 561
Target Start/End: Complemental strand, 24969238 - 24969155
Alignment:
Q  478 agattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24969238 agatttatctctccaatccactatcaattagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaagctcac 24969155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 222 - 346
Target Start/End: Complemental strand, 54881679 - 54881561
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    ||||||||||||||  |||| | ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||  |||   ||||||    
T  54881679 tgttgtgaattcgg--tcaattccaaacttcacatcaatgaaatttatattcgtggagcaagtatcaatgacaaccaacaaccaaa-ataa---accaca 54881586  T
Q  322 agcaataacaacaatctagatctag 346  Q
    ||||||||||||||| |||| ||||    
T  54881585 agcaataacaacaatatagacctag 54881561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 54199930 - 54200031
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| ||||||| ||||||||| ||| |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  54199930 tgacctaatctgggggagagaatgatctctctaattcactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 54200028  T
Q  559 cac 561  Q
    |||    
T  54200029 cac 54200031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 12739560 - 12739663
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||||    
T  12739560 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcatacaaatagatac-aaatgggttacaagaaat 12739657  T
Q  544 tagctt 549  Q
    ||||||    
T  12739658 tagctt 12739663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 45687192 - 45687307
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||| || | |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||| ||||| |||||||    
T  45687192 agttcggtccaact-tgacataatatggaggagagatagatctctccaatccactatcaatgagttcttacaaatagatac-aaatgagttataagaaat 45687289  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||  ||||||||||    
T  45687290 tagctttgacaagctcac 45687307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 3913578 - 3913491
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||| ||||||||||||||||||| |||||    
T  3913578 ggagagattgatctctccaatccactatcaatgagttcttacaaagatatac-aaatgggttaaaagaaattagcttcaacaaactcac 3913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 8393562 - 8393448
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  8393562 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 8393465  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  8393464 ttacaagaaattagctt 8393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 8395771 - 8395657
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  8395771 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 8395674  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  8395673 ttacaagaaattagctt 8395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 12744087 - 12744160
Alignment:
Q  476 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  12744087 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagctt 12744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 52467364 - 52467479
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||  |||| |||||||| ||||| ||||  ||||||||| ||    
T  52467364 agttcggtccaact-tgacctaatctcggggagagattgatctctccaatccactatcaaaaagttattacaaagtgatac-aaatgggttacaagatat 52467461  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  52467462 tagcttcaacaagctcac 52467479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 445 - 560
Target Start/End: Complemental strand, 29254652 - 29254538
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | |||  ||||||||||||||||||||||||||| || ||||||||||||||||| || ||||  ||| ||||||||    
T  29254652 agttcggtccaact-tgacctaatttgggagagagattgatctctccaatccactatcaacgagttcttacaaagagacac-aaatgggttgcaagaaat 29254555  T
Q  544 tagcttcaacaagctca 560  Q
    || ||||||||||||||    
T  29254554 taacttcaacaagctca 29254538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 476 - 546
Target Start/End: Original strand, 12745476 - 12745546
Alignment:
Q  476 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattag 546  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||    
T  12745476 agagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattag 12745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 41961746 - 41961603
Alignment:
Q  252 cacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtcta 350  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||   |||  || |||||||| ||||| | ||||||||||| ||||    
T  41961746 cacatcaatgaaatttagatctgtggggcaagtatcaatgacaaccaataaccaaa---aaa--actacaagcaacaacaatagatctagatctaatcta 41961652  T
Q  351 gaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaaga 399  Q
    | || || ||  | || |||||||||||| |||||||| ||||||||||    
T  41961651 gtaaccaggtttaaagcaaaaccacaatcaaaccaaagaataaacaaga 41961603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 5871964 - 5871863
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| ||||||||||||||||| |||||||||| || |||||||| ||||| |||| |||||  ||||||||||||| |||| ||||||||    
T  5871964 tgacctaatctgggggagagattgatctctctaatccactatcaaagagttcttgcaaagtgata-aaaatgggttacaagaaatttgcttaaacaagct 5871866  T
Q  559 cac 561  Q
    |||    
T  5871865 cac 5871863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 549
Target Start/End: Original strand, 12747794 - 12747869
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||  ||||||||||||||||||    
T  12747794 ggagagattgatctctccaatccactatcaatgagttcatacaaatagatac-aaatgggttacaagaaattagctt 12747869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 460 - 527
Target Start/End: Original strand, 13009468 - 13009536
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 527  Q
    ||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  13009468 tgacctaatttggaggagagatcgatctctccaatccactatcaatgagttcttacaaagggatacaaa 13009536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 416 - 561
Target Start/End: Complemental strand, 21688437 - 21688292
Alignment:
Q  416 aagataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 513  Q
    ||||||||||||||||||||| ||| |   | ||||||| |||  ||||||| ||| | |||| |||||||||||||||| || ||| |||||||||||     
T  21688437 aagataacaacaccaagaaattgttgactcaattcggtctaact-tgacctaatctaggggagggattgatctctccaattcattatcaatgagttcttc 21688339  T
Q  514 caaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | |||||||||||| | |||||||| ||||||| ||||||||||||||    
T  21688338 cgaagagatacaaa-tgagttacaaaaaattagtttcaacaagctcac 21688292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 558
Target Start/End: Original strand, 21703829 - 21703958
Alignment:
Q  429 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 526  Q
    ||||||||||| | | ||||||||| |||||||||||||| ||| ||| |||||||| ||||||||||||| | ||||||||| ||||||| ||||||||    
T  21703829 caagaaatgtttacccagttcggtcaaacaatgacctactatgg-ggatagattgatatctccaatccactgtcaatgagttctttacaaaaagatacaa 21703927  T
Q  527 aattagttacaagaaattagcttcaacaagct 558  Q
    ||   | |||||||||| | ||||||||||||    
T  21703928 aa-agggtacaagaaatcatcttcaacaagct 21703958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 447 - 559
Target Start/End: Complemental strand, 34112973 - 34112862
Alignment:
Q  447 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaatt 544  Q
    |||||||||||||||||||||| | | |||||||  |||||||||| | |||||| ||||||||||| |||||||||| |||||   |||||| ||||||    
T  34112973 ttcggtccaacaatgacctactataggggagaga--gatctctccacttcactatcaatgagttctttacaaagagatgcaaaagg-gttacatgaaatt 34112877  T
Q  545 agcttcaacaagctc 559  Q
    |||||||||||||||    
T  34112876 agcttcaacaagctc 34112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 5207866 - 5207967
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    |||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||| ||||| | ||   ||| ||| ||||||||||||||||| |    
T  5207866 tgacctactctgggagagagattgatctttccaatccactatcaatgagttcttacaaatagatatacaa-gggttgcaataaattagcttcaacaagtt 5207964  T
Q  559 cac 561  Q
    |||    
T  5207965 cac 5207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 528
Target Start/End: Complemental strand, 51337242 - 51337139
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    |||||| |||||||| | | |||||||||||||  ||||||| | ||  ||||||||||||||||| ||| |||||| |||||||||||| |||||||||    
T  51337242 acaccacgaaatgtttacccagttcggtccaact-tgacctaatgtgtgggagagattgatctctctaatacactatcaatgagttcttaaaaagagata 51337144  T
Q  524 caaaa 528  Q
    |||||    
T  51337143 caaaa 51337139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 480
Target Start/End: Original strand, 38811162 - 38811235
Alignment:
Q  408 gtagagaaaagataacaacacc-aagaaatgttcatctagttcggtccaacaatgacctactctggaggagaga 480  Q
    |||||||||||| ||||||||| ||||| |||| | | |||||||||||||||||||||||||| | |||||||    
T  38811162 gtagagaaaagagaacaacaccgaagaattgtttacccagttcggtccaacaatgacctactcttggggagaga 38811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 40630848 - 40630803
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  40630848 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 40630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 559
Target Start/End: Original strand, 44967818 - 44967952
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag-ttcttacaaagagat 522  Q
    |||| |||||||||| | | || ||||||||||| |||| || ||||| ||||||||||||| ||| |||| ||| | || ||| || ||||||||||||    
T  44967818 acacaaagaaatgtttacccaggtcggtccaacagtgacttattctgggggagagattgatccctctaatctactctcaacgagttttttacaaagagat 44967917  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctc 559  Q
    |||||  | ||||||||||||| |||||| |||||||    
T  44967918 acaaa--tggttacaagaaattggcttcagcaagctc 44967952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 50674150 - 50674195
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  50674150 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 50674195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 7125046 - 7124992
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  7125046 tgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 7124992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 21688572 - 21688470
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||| ||| ||| ||| |||| | ||   |||||||||| ||||| ||| ||||||||||||| ||| ||| ||||||  ||||||    
T  21688572 gtggagcaagtatcaatgacaatcaacaactaaatattaa---ccacaagcaacaacaataatatagatctagtctataaatcaaatgcataacaaaacc 21688476  T
Q  374 acaatc 379  Q
    ||||||    
T  21688475 acaatc 21688470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 379243 - 379197
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccat 603  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||    
T  379243 ctcacccaagttgctcacaaatgactctccactcatgtgtttcccat 379197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 5136224 - 5136155
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  5136224 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 5136155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 5138449 - 5138380
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  5138449 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 5138380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 44570432 - 44570489
Alignment:
Q  502 aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||||    
T  44570432 aatgagttctttacaaagagatacaaaaat-gttacaagaaattagtttcaacaagctc 44570489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 8648002 - 8647957
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||    
T  8648002 ctcacccaagttgctcacaaaagactctccactcctgtgtttccca 8647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 8665271 - 8665226
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||    
T  8665271 ctcacccaagttgctcacaaaagactctccactcctgtgtttccca 8665226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 26364129 - 26364084
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  26364129 ctcacccaagttgctcacaaatgactctccactcatgtgtttccca 26364084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 33989726 - 33989681
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  33989726 ctcacccaagttgctcacaaatgactctccactcatgtgtttccca 33989681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 41964279 - 41964234
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||    
T  41964279 ctcacccaagttgctcacaaaagactctctactcatgtgtttccca 41964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 559
Target Start/End: Complemental strand, 6677597 - 6677514
Alignment:
Q  477 gagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    |||||||||||||| |||||| ||| || || ||||| ||||||| ||||||||   ||||||||||||||||||||||||||||    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagg-gttacaagaaattagcttcaacaagctc 6677514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 559
Target Start/End: Original strand, 34788851 - 34788898
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  34788851 ttacaaagagatacaaaag-agttacaagaaattaacttcaacaagctc 34788898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 388
Target Start/End: Complemental strand, 6719842 - 6719771
Alignment:
Q  318 cacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaag 388  Q
    |||| |||| ||||||| ||||||||||| |||||||| |||||||| || |||||||||||  ||||||||    
T  6719842 cacaggcaaaaacaacagatctagatctaatctagaaaccaagtgcaaagcaaaaccacaataaaaccaaag 6719771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 7122827 - 7122773
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||| ||||||||||||||  ||||||||||||||||  |||||||||||    
T  7122827 tgacctactatggaggagagattgtactctccaatccactatcaaatgagttctt 7122773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 32091719 - 32091645
Alignment:
Q  325 aataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 400  Q
    |||||||||||| |||||||| ||||| ||||||||| | || |||||||||||  ||| |||| |||||||||||    
T  32091719 aataacaacaatttagatctaatctagcaaacaagtgtaaag-aaaaccacaattgaactaaagaataaacaagat 32091645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 33090223 - 33090164
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacc 304  Q
    |||| |||||||||||||||||| |||| |||| | ||||||||||| ||| ||||||||    
T  33090223 caaatctcacatcaatgaaattttgatttgtgggggaagtatcaatgacaatcaataacc 33090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 27416789 - 27416844
Alignment:
Q  220 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtgg 277  Q
    ||||||||||||||||  |||| | ||||| |||||||||| ||||||||||||||||    
T  27416789 tatgttgtgaattcgg--tcaattccaaacttcacatcaataaaatttagattcgtgg 27416844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 6655820 - 6655775
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  6655820 ctcacccaagttgctcagaaatgactctccactcatgtgtttccca 6655775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 12073256 - 12073215
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| ||| ||||||| |||||||||||||    
T  12073256 ctcacccaagttgctcacaaaagactcttcactcatgtgttt 12073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 523
Target Start/End: Original strand, 35369440 - 35369534
Alignment:
Q  429 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagata 523  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||  |||||||| || |||| |||| ||| || ||||||||| |||||||||||||    
T  35369440 caagaaatgtttaccttgtttggtccaacaatgacctactatg--ggagagatcgacctcttcaattcaccatcaatgagttctttacaaagagata 35369534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 38811016 - 38811069
Alignment:
Q  243 ttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaac 296  Q
    |||||| |||| | |||||||||||||||||| || ||||||||||||| ||||    
T  38811016 ttcaaatctcaaaccaatgaaatttagattcgcggggcaagtatcaatgacaac 38811069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 54882884 - 54882839
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||| ||| ||| ||||||| |||||||||||||||||    
T  54882884 ctcacccaagtttctcacaaaagactctacactcatgtgtttccca 54882839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 561
Target Start/End: Original strand, 55085442 - 55085490
Alignment:
Q  512 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||| |   |||||||||||||||||||||||||||||    
T  55085442 tacaaagagatacaaa-tggtttacaagaaattagcttcaacaagctcac 55085490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 55085669 - 55085714
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||| |||||||||| |||  ||||||||||||||||||||||||    
T  55085669 ctcacacaagttgctcacaaatgactctccactcatgtgtttccca 55085714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 32091570 - 32091527
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 555  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||    
T  32091570 ttacaaagagatacaaaag-agttacaagaaattagtttcaacaa 32091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 551
Target Start/End: Original strand, 37754949 - 37755076
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag-ttcttacaaagagat 522  Q
    |||| ||||||| || ||| ||||  ||| |||||| ||||||| ||| |||||||||||||||| ||| ||| ||| |||||| || ||| ||||||||    
T  37754949 acactaagaaatatttatccagtttagtctaacaattacctactatgggggagagattgatctcttcaaaccattatcaatgagttttttagaaagagat 37755048  T
Q  523 acaaaattagttacaagaaattagcttca 551  Q
    | ||||   |||||||||||||| |||||    
T  37755049 a-aaaaaaggttacaagaaattatcttca 37755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 602
Target Start/End: Original strand, 50263011 - 50263047
Alignment:
Q  566 gttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  50263011 gttgctcacaaaagactctccactcatgtgtttccca 50263047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-119; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 222 - 526
Target Start/End: Complemental strand, 28242688 - 28242382
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |    
T  28242688 tgttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatgacaaccaataaccaaatgtaaataacctc 28242589  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatag-aaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 419  Q
    |||||| |||||||||||||||||| | |||||| |||||| |||| ||||||||||||||||| ||| ||||||||||||       ||||||||||||    
T  28242588 aagcaacaacaacaatctagatctaatttagaaaccaagtgaatagcaaaaaccacaatctaacaaaatgataaacaagataaagagagtagagaaaaga 28242489  T
Q  420 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaaga 519  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28242488 taacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaaga 28242389  T
Q  520 gatacaa 526  Q
    |||||||    
T  28242388 gatacaa 28242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 243 - 561
Target Start/End: Complemental strand, 47115533 - 47115214
Alignment:
Q  243 ttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagat 342  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||| || ||||||||||| | |||||||||||||||||||||||||    
T  47115533 ttcaaaactcacatcaataaaatttagattcgtggagcaagtatcaatgacaatcaacaatcaaatgtaaataatcacaagcaataacaacaatctagat 47115434  T
Q  343 ctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcat 442  Q
    ||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||       | |||||||||||||||||| |||||||||||||     
T  47115433 ctaatctagaaaacaagtgcataacaaaaccacaatctaacaaaaggataaacaagataaaaagagcagagaaaagataacaacatcaagaaatgttcac 47115334  T
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||  ||||||||||    
T  47115333 ccagttcggtccaacaatgacctactctggagcagagattgatctctccaatccactatcaatgggtttttacaaagagatacaaaatgggttacaagaa 47115234  T
Q  542 attagcttcaacaagctcac 561  Q
    |||||||| |||||||||||    
T  47115233 attagcttaaacaagctcac 47115214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 37168678 - 37168340
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |    
T  37168678 tgttgtgaattcgatctcaaattccaaatctcgcatcaatgaaatttagattcgtagagcaagtatcaatgacaaccaataaccaaatgtaaataacctc 37168579  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 420  Q
    |||||| |||||  || |||| ||||||||  || ||||||||||| |||||||||||| |||||| | |||||||||||       ||| |||||||||    
T  37168578 aagcaacaacaa-tatatagacctagtcta-taatcaagtgcatagcaaaaccacaatcaaaccaaggaataaacaagataaagagagtaaagaaaagat 37168481  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    ||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37168480 aacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaga 37168382  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  37168381 gatacaaaatgggttacaagaaattagcttaaacaagctcac 37168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 222 - 561
Target Start/End: Original strand, 31925498 - 31925832
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    |||||||||||||| || || | ||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||     | ||||||    
T  31925498 tgttgtgaattcggtctgaattccaaacttcacattaatgaaatttagattcgtagagcaagtatcaatgacaaccaacaaccaaat-----taaccaca 31925592  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataa-acaagatnnnnnnngtagagaaaagat 420  Q
    ||||||||||| ||| |||| |||||||| ||| ||||||||||| |||||||||||| |||||||| |||| |||||||       ||| |||||| ||    
T  31925593 agcaataacaataatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaaccaaagaataatacaagataacgagagtaaagaaaaaat 31925692  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31925693 aacaacaccaagaaatgttcacctagttcggtccaac-ttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaaga 31925791  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| ||||  ||||||||||||||||||||||||||||||    
T  31925792 gatac-aaatgggttacaagaaattagcttcaacaagctcac 31925832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 37032907 - 37033198
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |    
T  37032907 gtggagcaaatatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaatc 37033006  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa--agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactct 470  Q
    ||| |||||||||||||||||||||||       |||||||||  ||| |||||||| || | | |||||| | ||||||||||||| |||||||||| |    
T  37033007 acactctaaccaaaggataaacaagataaagagagtagagaaaatagacaacaacacgaatagattgttcacccagttcggtccaaccatgacctactat 37033106  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  37033107 ggagaagagattaatctctccaatccactatcaatgagttcttacaaagagatgcaaaatggattacaagaaattagcttcaacaagctcac 37033198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 220 - 561
Target Start/End: Original strand, 7482009 - 7482356
Alignment:
Q  220 tatgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacca----aatgtaaat 314  Q
    |||| |||||||||||  |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    |||||||||    
T  7482009 tatggtgtgaattcggtatcaaattccaaacctcacatcaataaaatttaaattcgtggagcaagtatcaatgacaaccaataaccaaattaatgtaaat 7482108  T
Q  315 taccacaagcaataacaaca--atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga 412  Q
     ||| ||||||| |||||||  || |||| ||||||||  || ||||||||||| |||||||||||| |||||| | |||||||||||       ||| |    
T  7482109 aacctcaagcaacaacaacaatatatagacctagtcta-taatcaagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaa 7482207  T
Q  413 gaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttct 511  Q
    |||||||| |||| |||| |||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  7482208 gaaaagatgacaataccatgaaatgttcacctagttcggtccaac-ttgacctactctgaaggagagattgatctctccaattcactatcaatgagttct 7482306  T
Q  512 tacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  7482307 tacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcac 7482356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 47255179 - 47255465
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||| ||||||||||||||||| ||||||| |||||   ||| |||||| ||||| ||| |||| |||||||| ||| ||||||||||| ||||||    
T  47255179 gtggagcaggtatcaatggcaaccaacaaccaaa-gtaaa---ccataagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaacc 47255274  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngta---gagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    |||||||||||||||||||||||||||       |||   || |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  47255275 acaatctaaccaaaggataaacaagataaagagagtaaaagaaaaaaaataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactct 47255374  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  47255375 ggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 47255465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 29136577 - 29136290
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||| ||||| |||||||||||||||| ||| | ||||||||||||||||||||  |||| |||||||| ||| ||||||||||| ||||||    
T  29136577 gtggagcaagtaccaatgacaaccaataaccaaatataactaaccacaagcaataacaacaaaatagacctagtctataaaccaagtgcatagcaaaacc 29136478  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    |||||||||||||||||||||||||||       |||||||||| ||| ||| |||||||||||||||| ||||||||||||||   |||||||||||||    
T  29136477 acaatctaaccaaaggataaacaagataaagagagtagagaaaa-atagacagcaccaagaaatgttcacctagttcggtccaaacttgacctactctgg 29136379  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||  ||| ||||||||||||||||||||||||||    
T  29136378 aggagagattgatctctccaatccacgatcaatgagttcttacaaagaaatac-aaatgggttccaagaaattagcttcaacaagctcac 29136290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 11349030 - 11348741
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||| |||  ||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||    
T  11349030 gtggagcaagtatcaatgacaattaataatcaaatgtaaataaccacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaacc 11348931  T
Q  374 acaatctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    |||||| ||   ||||| ||||||||||       |  || |||||||||||||||| |||||||||||||   |||||||||||||  |||||||||||    
T  11348930 acaatccaaagcaaggaataaacaagataaagagagagtaaagaaaagataacaacatcaagaaatgttcactcagttcggtccaact-tgacctactct 11348832  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  11348831 ggaggagagattgatctctccaatccactatcaatgagttcttagaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 11348741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 13548842 - 13549125
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaa-gtgcatagaaaaac 372  Q
    |||||||||||||||||| ||||||| ||||||| |||||   |||||||||| ||||| ||| |||| |||||||| ||| ||| |||||||| |||||    
T  13548842 gtggagcaagtatcaatgacaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctagtctataaaccaaagtgcatagcaaaac 13548937  T
Q  373 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    ||||||| |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||    
T  13548938 cacaatccaaccaaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctgg 13549036  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||| |||||||| || |||||||||||    
T  13549037 aggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacatgaaattaggtttaacaagctcac 13549125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 274 - 527
Target Start/End: Original strand, 37876604 - 37876858
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 372  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| | |||| |||||||| ||| |||||||||||||||||    
T  37876604 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaaccacaagcaaaaacaacactatagacctagtctataaaccaagtgcatagaaaaac 37876703  T
Q  373 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    ||||||  ||||||| ||||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||| ||||  |||  ||||||||    
T  37876704 cacaattcaaccaaatgataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggttcaac-ttgatgtactctgg 37876802  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 527  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  37876803 aggagagattgatctctgcaatccactatcaatgagttattacaaagagatacaaa 37876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 13546935 - 13547214
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatcta--gtctagaaaacaagtgcatagaaaaa 371  Q
    |||||||||||||||||||||||||| ||||||| |||||   |||||||||| ||||| ||| |||| |||  || || ||| ||||||||     |||    
T  13546935 gtggagcaagtatcaatggcaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctatagtttataaaccaagtgca-----aaa 13547025  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    |||||||| |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||    
T  13547026 ccacaatccaaccaaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctg 13547124  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  13547125 gaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaaatagcttcaacaagctcac 13547214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 42297815 - 42298100
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||| ||||||||||||||||||| ||||||||     | |||| |||||||||||| ||| || | | |||||| ||| ||||||||||| |||| |    
T  42297815 gtggagaaagtatcaatggcaaccaacaaccaaat-----taaccataagcaataacaataatatataccaagtctataaaccaagtgcatagcaaaatc 42297909  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactc 469  Q
    |||||| |||||||  |||||||||||       ||| ||||||   || ||||||||||||| || ||||| | ||||||||||||| |||||||||||    
T  42297910 acaatccaaccaaataataaacaagataaaaga-gtaaagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactc 42298008  T
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  42298009 tggaggagagattgatctcttcaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 42298100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 253 - 561
Target Start/End: Complemental strand, 34603914 - 34603619
Alignment:
Q  253 acatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtcta 350  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||| ||| ||||||  |||| |||| ||  || ||||||||    
T  34603914 acatcaatgaaatctagatttgtggagcaagtatcaatgacaaccaataatcaaatgtaaataacctcaagcaccaacagcaatatatagacctagtcta 34603815  T
Q  351 gaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcg 450  Q
     ||  ||||||||||| |||||||||||| |||||| | |||||||||||       ||| ||||||||||||||||||              |||||||    
T  34603814 taat-caagtgcatagcaaaaccacaatccaaccaaggaataaacaagataaagagagtaaagaaaagataacaacacc--------------tagttcg 34603730  T
Q  451 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| |||||  ||||||||||||||||||    
T  34603729 gtccaact-tgacctactctggaggagagattgatctcttcaatccaccatcaatgagttcttacaaagagataaaaaatgggttacaagaaattagctt 34603631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 250 - 559
Target Start/End: Complemental strand, 6808799 - 6808497
Alignment:
Q  250 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtct 349  Q
    ||||||||||||||||||| |||  |||   |||||||||||||| ||||||||||||     || || |||||   ||||||||||||||||||  |||    
T  6808799 ctcacatcaatgaaatttaaatttatgggataagtatcaatggcagccaataaccaaa-----ataactacaag---taacaacaatctagatctgatct 6808708  T
Q  350 agaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttc 449  Q
    ||||| |||||| | || |||| ||| ||| ||| |||| |||||||||||       ||||| || | | |||||| ||||||||| || |||||||||    
T  6808707 agaaaccaagtgtaaagcaaaatcactatcaaactaaagcataaacaagataaagagagtagaaaacaaagaacaactccaagaaatatttatctagttc 6808608  T
Q  450 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagc 547  Q
    || |||||||| ||||||||||  | |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||| |||||    
T  6808607 ggaccaacaataacctactctgaggaagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaa-gagttacaagaagttagc 6808509  T
Q  548 ttcaacaagctc 559  Q
    ||||||||||||    
T  6808508 ttcaacaagctc 6808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 360 - 561
Target Start/End: Complemental strand, 19754737 - 19754538
Alignment:
Q  360 tgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaa 459  Q
    ||||||| |||||||||||| ||| ||||||||||||||||       ||| ||||||||||||| |||||| || |||| | | | |||||||||||      
T  19754737 tgcatagcaaaaccacaatccaacaaaaggataaacaagataaagagagtaaagaaaagataaca-caccaaaaattgttgacccacttcggtccaact- 19754640  T
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  19754639 tgacctaatctgagggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa-tcggttacaagaaattagcttcaacaagct 19754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 416 - 558
Target Start/End: Complemental strand, 193799 - 193657
Alignment:
Q  416 aagataac-aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctta 513  Q
    |||||||| |||||||||||||||||| | |||||||||||||  |||| |||||||||| |||||||||||||||||||||||||| |||||||| |||    
T  193799 aagataacgaacaccaagaaatgttcacccagttcggtccaact-tgacatactctggagaagagattgatctctccaatccactatcaatgagttatta 193701  T
Q  514 caaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||    
T  193700 caaagagatac-aaatgagttacaagaaattagcttcaacaagct 193657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 220 - 375
Target Start/End: Complemental strand, 194901 - 194750
Alignment:
Q  220 tatgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 319  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||   ||||    
T  194901 tatgttgtgaattcggactcaaatcgaaacctcacatcaatgaaatttagattcacggagcaagtatcaatggcaaccaacaaccaaa-gtaa---acca 194806  T
Q  320 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccac 375  Q
    ||||||| ||||| ||| |||| |||||||| ||| ||||||||||  ||||||||    
T  194805 caagcaacaacaataatatagacctagtctataaaccaagtgcatatcaaaaccac 194750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 8550787 - 8550912
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||    
T  8550787 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgagtt 8550885  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||| |||||||||||    
T  8550886 acaagaaattagcttaaacaagctcac 8550912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 354 - 559
Target Start/End: Complemental strand, 19752932 - 19752731
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 453  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||       ||| | |||||||||||   | ||  | |||| | |||||||||||    
T  19752932 aacaagtgcatagtaaaaccacaatccaacaaaaggataaacaagataaagagagtaaataaaagataaca---caaaagattgttgacctagttcggtc 19752836  T
Q  454 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    ||||  ||||||| | |||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  19752835 caact-tgacctaatatgggagagagattgatctctccaatcctctatcaatgagttcttacaaagagatacaaa-tcggttacaagaaattagcttcaa 19752738  T
Q  553 caagctc 559  Q
    |||||||    
T  19752737 caagctc 19752731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 421 - 561
Target Start/End: Complemental strand, 22079501 - 22079359
Alignment:
Q  421 aacaacaccaa-gaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaa 517  Q
    ||||||||||| |||||||| | | |||| |||||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||| |||||||    
T  22079501 aacaacaccaaagaaatgtttaccaagtttggtccagcaatgacctactttggaggagaaattgatctctccaatccaatatcaatgagttctttacaaa 22079402  T
Q  518 gagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||| | |||||||||||||||||| |||||||||||    
T  22079401 gagatacaaaa-tggttacaagaaattagctttaacaagctcac 22079359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 3189498 - 3189373
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3189498 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3189400  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    ||| |||||||||||||||||| ||||    
T  3189399 acaggaaattagcttcaacaagttcac 3189373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 3198315 - 3198190
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3198315 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3198217  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    ||| |||||||||||||||||| ||||    
T  3198216 acaggaaattagcttcaacaagttcac 3198190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 3207154 - 3207029
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||    
T  3207154 tgttcacccagttcggtccaaacttgacctactctggatgagagattgatctctccaatccactatcaatgagttcttacaaaaagatacaaaa-gagtt 3207056  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    ||| |||||||||||||||||| ||||    
T  3207055 acaggaaattagcttcaacaagttcac 3207029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 46065062 - 46064961
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||    
T  46065062 tgacctactctgggggagagattgatctctccaatccactatgaatgagttcttacaaagagatac-acatgagttacaagaaattagcttcaacgagct 46064964  T
Q  559 cac 561  Q
    |||    
T  46064963 cac 46064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 28220236 - 28220351
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  28220236 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 28220333  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  28220334 tagcttcaacaagttcac 28220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 28265564 - 28265679
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  28265564 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 28265661  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  28265662 tagcttcaacaagctcac 28265679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 443 - 561
Target Start/End: Complemental strand, 49918510 - 49918393
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||    
T  49918510 ctagttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaa 49918413  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||||||| ||||    
T  49918412 attagcttcaacaagttcac 49918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 245 - 559
Target Start/End: Original strand, 12318336 - 12318646
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatc 343  Q
    |||| |||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||     |||| | |||| |||| ||||||| ||||||||     
T  12318336 caaatctcacatcaatgaaatttggatgcatggggcaagtatcaatggcaaccaataacca-----aaataagcacacgcaacaacaacagatctagatt 12318430  T
Q  344 tagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcat 442  Q
    ||  |||| || ||| || | || |||| || |||  |||||||| |||||||||||       ||| |||||||| ||||||||||| ||| |||| |     
T  12318431 taacctagcaaccaattgtaaagcaaaatcataattgaaccaaagaataaacaagataaagggagtaaagaaaagagaacaacaccaaaaaattgtttac 12318530  T
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca-aagagatacaaaattagttacaaga 540  Q
    |||||||||||||| ||||| ||||| ||| |||||||  ||||||||   | || ||| |||||||||||| | |||| |||||||| | |||||||||    
T  12318531 ctagttcggtccaataatgaactactatgggggagaga--gatctctctgcttcagtatcaatgagttcttaaagaagacatacaaaa-tggttacaaga 12318627  T
Q  541 aattagcttcaacaagctc 559  Q
    |||||||||||||||||||    
T  12318628 aattagcttcaacaagctc 12318646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 834177 - 834292
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  834177 agttcggtccaact-tgacctactctgggggagagatagatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 834274  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  834275 tagcttaaacaagctcac 834292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 3157023 - 3156908
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  3157023 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 3156926  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  3156925 tagcttcaacaagttcac 3156908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 15820485 - 15820350
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||| ||||||| | |||||||| ||||||  |||||||||||||| |||||||| |||||| |||| |||||| |||||||||||| |||||||||    
T  15820485 acaccaataaatgtttacctagttcgatccaact-tgacctactctggatgagagatttatctcttcaatgcactatcaatgagttcttaaaaagagata 15820387  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||  | ||||||||||||||||||||||||||||||    
T  15820386 caaatgt-gttacaagaaattagcttcaacaagctcac 15820350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 31659396 - 31659281
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |  ||||||||||||    
T  31659396 agttcggtccaact-tgacctaatctgagggagagattgatctctccaatccactatcaataagttcttacaaagagatacaaa-tgggttacaagaaat 31659299  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  31659298 tagcttcaacaagctcac 31659281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 445 - 556
Target Start/End: Original strand, 28223431 - 28223541
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  28223431 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 28223528  T
Q  544 tagcttcaacaag 556  Q
    |||||||||||||    
T  28223529 tagcttcaacaag 28223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 443 - 549
Target Start/End: Complemental strand, 20762833 - 20762727
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    ||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||    
T  20762833 ctagttcggtccaaacttgacctactctgtaggagagattgatctctccaatccactatcaatgagttcttacgaagagatacaaaa-gggttacaagaa 20762735  T
Q  542 attagctt 549  Q
    ||||||||    
T  20762734 attagctt 20762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 13316352 - 13316465
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  13316352 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 13316450  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  13316451 acaagaaattagctt 13316465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 13659346 - 13659458
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  13659346 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 13659443  T
Q  544 tagcttcaacaagct 558  Q
    |||||||||||||||    
T  13659444 tagcttcaacaagct 13659458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 44455304 - 44455203
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||||| ||||||||| |    
T  44455304 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgagttacaagaaattagtttcaacaagtt 44455206  T
Q  559 cac 561  Q
    |||    
T  44455205 cac 44455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 460 - 552
Target Start/End: Complemental strand, 1833666 - 1833574
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  1833666 tgacctaatctggtggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaatttagcttcaa 1833574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 4552647 - 4552762
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    ||||||||||||    
T  4552647 agttcggtccaact-tgacctactctgagggagagattgatctctccaatccattatcaatgagttcttacaaagggatacaaaggg-gttacaagaaat 4552744  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  4552745 tagcttcaacaagctcac 4552762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 45644364 - 45644479
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||    
T  45644364 agttcggtccaact-tgacctaatctgggggagatattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttgcaagaaat 45644461  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||  ||||||||||    
T  45644462 tagctttgacaagctcac 45644479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 429 - 554
Target Start/End: Complemental strand, 5460081 - 5459956
Alignment:
Q  429 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 526  Q
    ||||||||||| | ||||||| | |||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||||| ||||||||| ||| ||    
T  5460081 caagaaatgtttacctagttcagcccaacaatgatctactctagatgagagattgatctctccaatctactatcaatgagttctttacaaagaaatataa 5459982  T
Q  527 aattagttacaagaaattagcttcaaca 554  Q
    |||  |||||||||||||||||||||||    
T  5459981 aat--gttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 475 - 561
Target Start/End: Complemental strand, 16455750 - 16455664
Alignment:
Q  475 gagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||    
T  16455750 gagagattgatctctccaatccactatcaatgagttcttacacagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 16455664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 50167183 - 50167300
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||| ||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||  ||||||||||    
T  50167183 ctagttcggtccaact-tgagctaatctgggggagagattgatctctccaatccactatcaatgagtttttacaaagagatac-aaatgggttacaagaa 50167280  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||  ||||||||||    
T  50167281 attagctttgacaagctcac 50167300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 51765565 - 51765450
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   || |||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||    
T  51765565 tgttcacccagttcggtccaaacttgtcctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaaggggt 51765466  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  51765465 tacaagaaattagctt 51765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 31929345 - 31929431
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaat 308  Q
    |||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  31929345 tgttgtgaattcggtctcaatttcaaacttcacgtcaatgaaatttagattcgtggagcaagtatcaatgacaaccatcaaccaaat 31929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 37503565 - 37503679
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||| ||||||  |||| || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||     ||||||||||    
T  37503565 ctagttcgatccaact-tgacataatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaa----ggttacaagaa 37503659  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||||||| ||||    
T  37503660 attagcttcaacaagttcac 37503679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 50169211 - 50169335
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||| ||| |||||||||||||  ||||||| ||| | |||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  50169211 tgttgatccagttcggtccaact-tgacctaatctaggggagagattgatctcttcaatccactatcaatgagtacttacaaagagatac-aaatgagtt 50169308  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||  ||||||||||    
T  50169309 acaagaaattagctttgacaagctcac 50169335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 13137986 - 13138101
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||| | ||||||||||| | |||||||||| ||||| ||||||||||| |||| |||||||||||||||| |||| |  ||||||||||||    
T  13137986 agttcggtccaata-tgacctactctaggggagagattgctctcttcaatccactatcaatgtgttcttacaaagagatgcaaa-tgggttacaagaaat 13138083  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  13138084 tagcttcaacaagctcac 13138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 23555257 - 23555390
Alignment:
Q  426 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatac 524  Q
    |||||||||||||| |   |||||| ||||||  ||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23555257 caccaagaaatgtttactcagttcgatccaact-tgacctactatgg-ggagagattgaactctccaatccactatcaatgagttcttacaaagagatac 23555354  T
Q  525 aaaattagttacaagaaattagcttcaacaagctcac 561  Q
     |||| ||||| |||||||||| ||||||||| ||||    
T  23555355 -aaatgagttataagaaattagtttcaacaagttcac 23555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 443 - 561
Target Start/End: Complemental strand, 41361074 - 41360957
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||| | ||||||||| ||| ||||| ||||||||||  |||||||||| || ||||||||||||||||||||||| |  ||||||||||    
T  41361074 ctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttcttacaaagagatacaaa-tgggttacaagaa 41360977  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||| ||||||||||||||    
T  41360976 attagtttcaacaagctcac 41360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 37282682 - 37282817
Alignment:
Q  426 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagagata 523  Q
    |||||| ||||||| ||||||||| |||||| | ||||||||||   |||||||||| ||||||||||||||||| |||||||||| ||||||||||||     
T  37282682 caccaaaaaatgtttatctagttcagtccaa-attgacctactccaaaggagagatttatctctccaatccactactaatgagttctttacaaagagatg 37282780  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||   ||||| | ||||||||||||||||||||||    
T  37282781 caaaa-gggttaccataaattagcttcaacaagctcac 37282817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 196908 - 197033
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggagg-agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagt 533  Q
    |||| ||| |||||||||||||  ||||||| ||||| || ||||||  |||||||||||||||||| ||||||||||||||||| |||||||| | |||    
T  196908 tgttgatccagttcggtccaact-tgacctaatctggggggagagataaatctctccaatccactatcaatgagttcttacaaagggatacaaa-tgagt 197005  T
Q  534 tacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||| ||| |||||||||||    
T  197006 tacaagaaattaacttaaacaagctcac 197033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 40122204 - 40122323
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat---aatgagttcttacaaagagatacaaaattagttacaag 539  Q
    |||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||   || |||||||||||||| ||||| |||| ||||| |||    
T  40122204 ctagttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatatcaaagagttcttacaaagtgatac-aaatgagttataag 40122301  T
Q  540 aaattagcttcaacaagctcac 561  Q
    |||||||||| |||||||||||    
T  40122302 aaattagcttaaacaagctcac 40122323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 408 - 500
Target Start/End: Complemental strand, 2926706 - 2926613
Alignment:
Q  408 gtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta 500  Q
    |||||| ||| | ||||||||||| ||| |||| | |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  2926706 gtagagtaaaaagaacaacaccaaagaattgtttacctagttcggtgcaacaatgacctactctgcagaagagattgatctctccaatccacta 2926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 10925356 - 10925266
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatga---gttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||| ||||||||||||||| |||||    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  10925356 ggagagattgatttctccaatccactatcaatgaattcttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 10925266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 556
Target Start/End: Original strand, 9109239 - 9109540
Alignment:
Q  255 atcaatgaaatttagattcgtggagcaagtatcaat--ggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtctag 351  Q
    |||||| |||||||||||  | ||||||||||||||  | ||||||||||| |||     || |||||||| |||||||||| |||||||||||  ||||    
T  9109239 atcaataaaatttagatttcttgagcaagtatcaatatgacaaccaataactaaa-----ataaccacaagtaataacaacagatctagatctaagctag 9109333  T
Q  352 aaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaa-gatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcg 450  Q
     || ||| ||   || | |||||||||| |||||||| |||||||| |||       |||||||  | |||||| | |||| ||||||| | |||||| |    
T  9109334 caaccaactgtgaagcataaccacaatcaaaccaaagaataaacaaagataaagagagtagagactaaataacagccccaaaaaatgtttacctagtttg 9109433  T
Q  451 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagct 548  Q
    || |||| ||||| ||||||   | ||||||||||||||||||| |||||| || | |||| ||||||||||||||||||   |||||||||||||| ||    
T  9109434 gttcaacgatgacttactctatggaagagattgatctctccaatacactatcaacgtgttctttacaaagagatacaaaa-gggttacaagaaattaact 9109532  T
Q  549 tcaacaag 556  Q
    ||||||||    
T  9109533 tcaacaag 9109540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 37559877 - 37559994
Alignment:
Q  445 agttcggtccaacaatgacctactct-ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaa 542  Q
    |||||||||||||  ||||||| ||| || ||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||  |||||||||||    
T  37559877 agttcggtccaact-tgacctaatctagggggagagattgatctctccaattcactatcaacgagttcttacaaagagatac-aaatgggttacaagaaa 37559974  T
Q  543 ttagc-ttcaacaagctcac 561  Q
    ||||| ||||||||| ||||    
T  37559975 ttagctttcaacaagttcac 37559994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 927966 - 928101
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    |||| |||||||||| | | ||||||||| |||  ||||||||  ||| | |||| ||| |||||| |||||||||| |||||||| ||||||||||||     
T  927966 acacaaagaaatgtttacccagttcggtctaact-tgacctaccttggggaagaggttggtctctctaatccactattaatgagtttttacaaagagatc 928064  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||   ||||||||||||||||||||||||||||||    
T  928065 caaaagg-gttacaagaaattagcttcaacaagctcac 928101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 427 - 562
Target Start/End: Original strand, 2262965 - 2263101
Alignment:
Q  427 accaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatac 524  Q
    ||||||||||||| |   ||||||| ||||||||||||||| ||   ||| |||||||||||| ||||||||||| ||| ||||| ||||||| |||||     
T  2262965 accaagaaatgtttactcagttcggaccaacaatgacctaccctaagggaaagattgatctcttcaatccactatcaataagttctttacaaaaagatat 2263064  T
Q  525 aaaattagttacaagaaattagcttcaacaagctcacc 562  Q
    ||||   |||||||||||||| ||||||||||||||||    
T  2263065 aaaa-gggttacaagaaattatcttcaacaagctcacc 2263101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 3847131 - 3847246
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| | |||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||| || |    
T  3847131 agttcggtccaact-tgacctaatctggggaagagatggatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaaaaatt 3847228  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| ||||| |||||    
T  3847229 tagcttaaacaaactcac 3847246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 40282545 - 40282435
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  40282545 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 40282448  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  40282447 tacaagaaattag 40282435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 453 - 545
Target Start/End: Complemental strand, 13938288 - 13938195
Alignment:
Q  453 ccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaaatta 545  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||||||    
T  13938288 ccaacaatgacctacatctgggggagaga--gatctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaatta 13938195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 9987369 - 9987287
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  9987369 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaatgagttcttgcaaa 9987287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 20622237 - 20622319
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||    
T  20622237 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaa 20622319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 556
Target Start/End: Original strand, 30476486 - 30476566
Alignment:
Q  476 agagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaag 556  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||||    
T  30476486 agagattgatctgtccaatccagtatcaatgagttcttacaaagagatac-aaatgggttacaataaattatcttcaacaag 30476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 9036584 - 9036471
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||  |||| ||||||||||| || |||||||||| |||| |||||||||   ||    
T  9036584 tgttcacccagttcggtccaaacttgacctactctcgaggagagattgtactcttcaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 9036487  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  9036486 tacaagaaattagctt 9036471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 44203800 - 44203722
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  44203800 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 44203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 36683824 - 36683766
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    ||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||    
T  36683824 tgacctactctgggggagagattgatttctacaatccactatcaatgagttcttacaaa 36683766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 41136169 - 41136107
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaa 307  Q
    |||| |||||||||||||||||||||||||||| | |||||| | || |||||||||||||||    
T  41136169 caaatctcacatcaatgaaatttagattcgtggggaaagtattattgacaaccaataaccaaa 41136107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 7482534 - 7482579
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  7482534 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 7482579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 19754355 - 19754310
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  19754355 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 19754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 21054117 - 21054044
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||||||    
T  21054117 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaa 21054044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 37168161 - 37168116
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  37168161 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 37168116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 37879215 - 37879260
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  37879215 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 37879260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 275 - 308
Target Start/End: Complemental strand, 6398960 - 6398927
Alignment:
Q  275 tggagcaagtatcaatggcaaccaataaccaaat 308  Q
    ||||||||||||||||||||||||||||||||||    
T  6398960 tggagcaagtatcaatggcaaccaataaccaaat 6398927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 28242252 - 28242207
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  28242252 ctcacccaagttgctcacaaatgactctccactcatgtgtttccca 28242207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 37033377 - 37033422
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  37033377 ctcacccaagttgctcacaaatgactctccactcatgtgtttccca 37033422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 42298279 - 42298324
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  42298279 ctcacccaagttgctcgcaaatgactctccactcatgtgtttccca 42298324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 47115035 - 47114990
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||    
T  47115035 ctcacccaagttgctcacaaaagactctccattcatgtgtttccca 47114990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 598
Target Start/End: Original strand, 13547394 - 13547434
Alignment:
Q  558 tcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  13547394 tcacccaagttgctcacaaaagactctccactcatgtgttt 13547434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 598
Target Start/End: Original strand, 13549305 - 13549345
Alignment:
Q  558 tcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  13549305 tcacccaagttgctcacaaaagactctccactcatgtgttt 13549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 561
Target Start/End: Complemental strand, 3460821 - 3460739
Alignment:
Q  480 attgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||| ||||| |||  |||||| ||||||| ||||||||   ||||||| ||||||||||||||||||||||    
T  3460821 attgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagg-gttacaataaattagcttcaacaagctcac 3460739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 8871089 - 8871127
Alignment:
Q  463 cctactctggaggagagattgatctctccaatccactat 501  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  8871089 cctactatgggggagagattgatctctccaatccactat 8871127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 11348562 - 11348521
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  11348562 ctcacccaagttgctcacaaatgactctccactcatgtgttt 11348521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 31926010 - 31926055
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| ||| |||||||||| ||||||||||    
T  31926010 ctcacccaagttgctcacaaaagattctccactcacgtgtttccca 31926055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 561
Target Start/End: Original strand, 37879007 - 37879036
Alignment:
Q  532 gttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||||    
T  37879007 gttacaagaaattagcttcaacaagctcac 37879036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 44650153 - 44650288
Alignment:
Q  426 caccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagtt-cttacaaagagata 523  Q
    |||||| |||| || | |||||||||||||| | ||||||||| | | | |||||||||||||| |||||||||| |||||| ||  |||||||||||||    
T  44650153 caccaaaaaatatttacctagttcggtccaa-attgacctacttttgggaagagattgatctcttcaatccactattaatgaattatttacaaagagata 44650251  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
     ||||  | |||||| |||||||| | ||||| |||||    
T  44650252 taaaa-gatttacaataaattagcgttaacaaactcac 44650288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 559
Target Start/End: Original strand, 1050520 - 1050567
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    ||||||||||| |||||| | ||||||||||||||||||||| ||||||    
T  1050520 ttacaaagagacacaaaaat-gttacaagaaattagcttcaataagctc 1050567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 22079658 - 22079598
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacca 305  Q
    |||| |||| |||||||||||||||||| ||||  || ||||||||| ||| |||||||||    
T  22079658 caaatctcatatcaatgaaatttagatttgtgggacatgtatcaatgacaaacaataacca 22079598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 25652178 - 25652135
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 555  Q
    |||||||||||||||| |  |||||||||||||||||||||||||    
T  25652178 ttacaaagagatacaagag-agttacaagaaattagcttcaacaa 25652135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 40329158 - 40328822
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||||    
T  40329158 tgttgtgaattcggtctcaaattttaaacctcacatcaatgaaatttagattcgtagagcaagtatcaatgacaaccaacaaccaaatgtaaataaccac 40329059  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 420  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||    
T  40329058 aagcaataacaacagtctagatctaatctagaaaacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagaaaaggagagtagagaaaagat 40328959  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    |||||||||||||||||||||   ||||| ||||||     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40328958 aacaacaccaagaaatgttcactcagttccgtccaa-----acctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaaga 40328864  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||| |||||||||||||||| || |||||||||||    
T  40328863 gatacaaaatgagttacaagaaattagtttaaacaagctcac 40328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 3772571 - 3772235
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    ||||||||||||||  |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| | |||| ||||||    
T  3772571 tgttgtgaattcgg--tcaattccaaacctcacatcaatgaaatttagattcgtggagcaggtatcaatggcaaccaatcaccaaaagaaaataaccaca 3772474  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 421  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||       ||||||||||||||    
T  3772473 agcaacaacaacaatctagatttaatctagaaatcaagtgcatagcaaaaccacaatctaaccaaagaataaacaagataaagagagtagagaaaagata 3772374  T
Q  422 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagag 520  Q
    ||| ||||||||||| || ||| |||| ||||||||  ||||||||||||   || |||||||||||||||||||||||| ||| | ||||||||||||     
T  3772373 acaccaccaagaaatatttatccagtttggtccaac-ttgacctactctgagagatagattgatctctccaatccactatcaataaattcttacaaagat 3772275  T
Q  521 atacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||| |||| ||||||||||||||||||| || ||||||||    
T  3772274 atac-aaatgagttacaagaaattagcttaaataagctcac 3772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 11384314 - 11384028
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||| |||||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  11384314 gtggagtaagtatcattgacaagcaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 11384215  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    |||||||||||||||||||||||||||       ||| |||||| ||| |||||||||| ||||||||| | |||||||||||||  | |||||||||||    
T  11384214 acaatctaaccaaaggataaacaagataaagagagtaaagaaaa-atagacaacaccaaaaaatgttcacccagttcggtccaac-ttaacctactctgg 11384117  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||| ||| ||||||||||| ||| |||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  11384116 aggagagatcgatgtctccaatccagtatcaatgggttcttacaaagagatac-aaatgagttacaagaaattagcttcaacaaactcac 11384028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 18655732 - 18655443
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  18655732 gtggagcaaatatcaatgacaaccaataaccaaatgtaaataaacacaagcaataacaacaatatagatctagtctataaaccaagtgcatagcaaaacc 18655633  T
Q  374 acaatctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    |||||| ||   ||||| ||||||||||       |  || |||||||||||||||||||| ||||||||| | |||||||||||||  ||||||||| |    
T  18655632 acaatccaaagcaaggaataaacaagataaagagagagtaaagaaaagataacaacaccaaaaaatgttcacccagttcggtccaact-tgacctacttt 18655534  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  18655533 ggaggagagattgatctctctaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 18655443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 316 - 561
Target Start/End: Complemental strand, 4283811 - 4283567
Alignment:
Q  316 accacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaa 415  Q
    ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||  ||||||||||||||||||||       ||| ||||    
T  4283811 accacaagcaataacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaattcaaccaaaggataaacaagataaagagagtaaagaa 4283712  T
Q  416 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 514  Q
    |||||||||||||||||||||||||| | |||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  4283711 aagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctagaggggagattgatctctccaatccactatcaatgagttcttac 4283613  T
Q  515 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  4283612 aaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 4283567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 276 - 561
Target Start/End: Original strand, 42434831 - 42435116
Alignment:
Q  276 ggagcaagtatcaatggcaaccaataaccaaa--tgtaaattaccacaagcaataacaacaatc--tagatctagtctagaaaacaagtgcatagaaaaa 371  Q
    |||||||||||||||||||||||| |||||||  ||| ||   |||||||||| |||||||||   |||| |||||||| ||  ||||||||||| ||||    
T  42434831 ggagcaagtatcaatggcaaccaacaaccaaaaatgttaa---ccacaagcaacaacaacaatagatagacctagtctataat-caagtgcatagcaaaa 42434926  T
Q  372 ccacaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    |||||||| ||   ||||| ||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||    
T  42434927 ccacaatccaaagcaaggaataaacaagataaagaaagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactct 42435025  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  42435026 ggaggagagattgatttctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 42435116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 354 - 561
Target Start/End: Complemental strand, 40221994 - 40221788
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 453  Q
    ||||||||||||| |||||||||||| |||||||| || ||||||||       ||| ||| ||||||||||||||||  | | || | | |||||||||    
T  40221994 aacaagtgcatagcaaaaccacaatccaaccaaagaatgaacaagataaagagagtaaagacaagataacaacaccaaagattattgacccagttcggtc 40221895  T
Q  454 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    ||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  40221894 caact-tgacctaatctgggggagagattgatctctccaatccactatcaacgagttcttacaaagagatac-aaatgggttacaagaaattagtttcaa 40221797  T
Q  553 caagctcac 561  Q
    |||||||||    
T  40221796 caagctcac 40221788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 354 - 561
Target Start/End: Original strand, 10930116 - 10930324
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaaagataacaacaccaagaaat-gttcatctagttcgg 451  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||       | | | |||||||||||||||||||||||| ||| | | |||||||    
T  10930116 aacaagtgcatagcaaaaccacaatccaacaaaagaataaacaagataaagggagcaaaagaaaagataacaacaccaagaaattgttgacccagttcgg 10930215  T
Q  452 tccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttc 550  Q
    ||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||  |||||||||||||||||||    
T  10930216 tccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgtgttcttacaaagagata-taaatgggttacaagaaattagcttc 10930313  T
Q  551 aacaagctcac 561  Q
    ||| |||||||    
T  10930314 aacgagctcac 10930324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 42498362 - 42498237
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||   |||    
T  42498362 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagaaatacaaaa-gggtt 42498264  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||| ||||    
T  42498263 acaagaaattagcttcaacaagttcac 42498237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 1292454 - 1292588
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    |||||||||||||||   | |||||||||||||  ||||||||||||| ||||||||| || |||| |||||||||| ||||||||||||||||||||||    
T  1292454 acaccaagaaatgtttgcccagttcggtccaact-tgacctactctgg-ggagagatttatttctcaaatccactatcaatgagttcttacaaagagata 1292551  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||| | |||||||||||||||||||||||||||||||    
T  1292552 caaa-tgagttacaagaaattagcttcaacaagctcac 1292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 30143476 - 30143383
Alignment:
Q  468 tctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  30143476 tctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 30143383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 3303680 - 3303795
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  3303680 agttcggtccaact-tgacctactgtgggggagagattgatctcttcaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaat 3303777  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| || |||||||||||    
T  3303778 taggttaaacaagctcac 3303795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 15212944 - 15212829
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  15212944 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccattatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 15212847  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  15212846 tagcttcaacaagttcac 15212829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 27811436 - 27811321
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| |  ||||||||||||    
T  27811436 agttcggtccaact-tgacctaatctgggggagagattgatctcttcaatccactatcaatgggttcttacaaagagatacaaa-tgggttacaagaaat 27811339  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  27811338 tagcttcaacaagctcac 27811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 33352308 - 33352193
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  33352308 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 33352211  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| ||||||||| ||||    
T  33352210 taggttcaacaagttcac 33352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 43036581 - 43036466
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| | |||||||||||    
T  43036581 agttcggtccaact-tgacctaatctggaggagagattgatctctcaaatccactatcaatgagttcttacaaagagatac-aaatgaattacaagaaat 43036484  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| ||||||||| ||||    
T  43036483 tagtttcaacaagttcac 43036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 460 - 549
Target Start/End: Original strand, 19945383 - 19945473
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  19945383 tgacctactctcgaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaagtggttacaagaaattagctt 19945473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 34256507 - 34256616
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  34256507 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 34256605  T
Q  535 acaagaaatta 545  Q
    |||||||||||    
T  34256606 acaagaaatta 34256616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 44304023 - 44303910
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| |||||||| |||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||  | ||    
T  44304023 tgttcacctagttcgatccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttaaaaagagatacaaaagga-tt 44303925  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  44303924 acaagaaattagctt 44303910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 5689429 - 5689314
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  5689429 agttcggtccaact-tgaccaaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 5689332  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||  ||||||||||    
T  5689331 tagctttgacaagctcac 5689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 445 - 559
Target Start/End: Complemental strand, 7597774 - 7597659
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaa 542  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||  | ||| ||||||    
T  7597774 agttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaaaagga-ttataagaaa 7597676  T
Q  543 ttagcttcaacaagctc 559  Q
    |||||||||||||||||    
T  7597675 ttagcttcaacaagctc 7597659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 445 - 546
Target Start/End: Complemental strand, 2627895 - 2627792
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttaca-aagagatacaaaattagttacaagaaa 542  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||  |||| |||||||    
T  2627895 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacacaagagatacaaaaagagttgcaagaaa 2627796  T
Q  543 ttag 546  Q
    ||||    
T  2627795 ttag 2627792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 447 - 561
Target Start/End: Complemental strand, 4731814 - 4731701
Alignment:
Q  447 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 545  Q
    |||||||||||  ||||| | ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||    
T  4731814 ttcggtccaact-tgaccgaatctgggggagagatcgatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaatta 4731717  T
Q  546 gcttcaacaagctcac 561  Q
    | ||||||||||||||    
T  4731716 ggttcaacaagctcac 4731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 556
Target Start/End: Complemental strand, 4162652 - 4162545
Alignment:
Q  447 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 545  Q
    |||||||||||  ||||||||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  4162652 ttcggtccaact-tgacctactcttggggagagattgatatctccaatcc-ctatcaatgagttcttacaaagagatacaaa-tgagttacaagaaatta 4162556  T
Q  546 gcttcaacaag 556  Q
    |||||||||||    
T  4162555 gcttcaacaag 4162545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 17982821 - 17982712
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  17982821 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 17982723  T
Q  535 acaagaaatta 545  Q
    |||||||||||    
T  17982722 acaagaaatta 17982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 18141964 - 18141863
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||| | |||||||||||||||||||||||||||| || |||||||||||||| |||||||| |  |||||||||||||||||||||||||||    
T  18141964 tgacctaatctaggggagagattgatctctccaatccactatcaaagagttcttacaaagtgatacaaa-tgggttacaagaaattagcttcaacaagct 18141866  T
Q  559 cac 561  Q
    |||    
T  18141865 cac 18141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 31218425 - 31218312
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||   |||    
T  31218425 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctctaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 31218327  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  31218326 acaagaaattagctt 31218312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 34254331 - 34254440
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||   |||    
T  34254331 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaataagttcttacaaagagatacaaaa-gggtt 34254429  T
Q  535 acaagaaatta 545  Q
    |||||||||||    
T  34254430 acaagaaatta 34254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 557
Target Start/End: Complemental strand, 10015257 - 10015128
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||| | | | |||||||||||||  ||||||||| ||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||    
T  10015257 acaccaagaaatgattacccagttcggtccaact-tgacctactatggag-agagatttatctctccaatccactatcaatgagttccta-aaagagata 10015161  T
Q  524 caaaattagttacaagaaattagcttcaacaagc 557  Q
    |||| | |||||||||||||||||||||||||||    
T  10015160 caaa-tgagttacaagaaattagcttcaacaagc 10015128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 12702644 - 12702759
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||   ||||||||||||    
T  12702644 agttcggtccaact-tgacctaatctaggggagagattgatctctccaatccaatatcaatgagttcttacaaagagacacaaaa-gggttacaagaaat 12702741  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  12702742 tagcttcaacaagttcac 12702759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 40321238 - 40321123
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||  |||  ||||||||||||    
T  40321238 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagtttttacaaagagatac-taatgggttacaagaaat 40321141  T
Q  544 tagcttcaacaagctcac 561  Q
    || |||||||||||||||    
T  40321140 taacttcaacaagctcac 40321123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 30291737 - 30291650
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| || || ||||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  30291737 ggagagattgatctctccaatccactatcaaagaattcttacaaagtgatacaaa-tgagttacaagaaattagcttcaacaagctcac 30291650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 19491707 - 19491824
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||| | ||||||||| ||| ||||| ||||||||||  |||||||||| || ||||||||||||||||||||||| |  ||||||||||    
T  19491707 ctagttcggtccaata-tgacctactatgggggagatattgatctctttaatccactatcaacgagttcttacaaagagatacaaa-tgggttacaagaa 19491804  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||| ||||||||||||||    
T  19491805 attagtttcaacaagctcac 19491824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 1746219 - 1746331
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  1746219 tgttcacccagttcggtccaaacttgacctactatggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gggtt 1746316  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  1746317 acaagaaattagctt 1746331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 3439671 - 3439558
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||||| ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  3439671 tgttcatccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 3439574  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  3439573 tacaagaaattagctt 3439558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 44353923 - 44353836
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||    
T  44353923 ggagagattgatcttttcaatccactatcaatgagttcttacaaagagatacaaatgt-gttacaagaaattagcttcaacaagttcac 44353836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 1345379 - 1345496
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    ||||||||||| |||  ||||||||||||| ||||||||||| |||| ||||||||||| ||||||||||| ||||||||||| | ||  ||||||||||    
T  1345379 ctagttcggtctaact-tgacctactctgggggagagattgaactcttcaatccactatcaatgagttctttcaaagagatac-atatgggttacaagaa 1345476  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||| || |||||    
T  1345477 attagcttcaataaactcac 1345496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 555
Target Start/End: Complemental strand, 8153936 - 8153807
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||| |||| || ||| | |||||||||||  ||||||||||||  | |||||||||||||||||||| ||||| |||||||||||||||||| |||    
T  8153936 acaccaaaaaatatttatccatttcggtccaact-tgacctactctgaggaagagattgatctctccaatcaactatcaatgagttcttacaaagatata 8153838  T
Q  524 caaaattagttacaagaaattagcttcaacaa 555  Q
    |||||  ||||||| ||| |||||||||||||    
T  8153837 caaaa-gagttacacgaatttagcttcaacaa 8153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 445 - 559
Target Start/End: Original strand, 18106091 - 18106201
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| | |||||||||||||    
T  18106091 agttcggtccaact-tgacctattctgg-ggagagattgatctctccaaac-actatcaatgagttcttacaaa-agatacaaa-tgagttacaagaaat 18106185  T
Q  544 tagcttcaacaagctc 559  Q
    ||||||||||||||||    
T  18106186 tagcttcaacaagctc 18106201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 445 - 556
Target Start/End: Original strand, 29796329 - 29796442
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag--ttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||| ||||||  || ||||||| || ||||||| | ||||||||||    
T  29796329 agttcggtccaacaatgacctacattgggggagagattgatctctccaatccattataaatgagtttttttacaaataggtacaaaaat-gttacaagaa 29796427  T
Q  542 attagcttcaacaag 556  Q
    || ||||||||||||    
T  29796428 atcagcttcaacaag 29796442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 454 - 554
Target Start/End: Original strand, 32902191 - 32902292
Alignment:
Q  454 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttca 551  Q
    |||||||||||||||| || ||||||||||||||||| ||| |||||| ||||| ||| ||| ||||||||||||||  |||||||||||||||||||||    
T  32902191 caacaatgacctactcagggggagagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaa-aagttacaagaaattagcttca 32902289  T
Q  552 aca 554  Q
    |||    
T  32902290 aca 32902292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 41366625 - 41366736
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||| |||||||    
T  41366625 agttcggtccaact-tgacctaatctag-ggagagattgatctctccaatccactataaatgagttcttacaaagggatac-aaataggttaaaagaaat 41366721  T
Q  544 tagcttcaacaagct 558  Q
    |||||| ||||||||    
T  41366722 tagcttaaacaagct 41366736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 559
Target Start/End: Original strand, 11711993 - 11712124
Alignment:
Q  429 caagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaa 526  Q
    ||||||||||| | | | || || |||||||||||||||| ||  |||||||||||||||| ||||||||||| ||||||||  ||||||||||||| ||    
T  11711993 caagaaatgtttacccaattaggaccaacaatgacctactttgagggagagattgatctcttcaatccactatcaatgagttatttacaaagagatataa 11712092  T
Q  527 aattagttacaagaaattagcttcaacaagctc 559  Q
    ||   ||| ||||||||||||||||||||||||    
T  11712093 aa-gggtttcaagaaattagcttcaacaagctc 11712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 40222102 - 40222019
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaa 307  Q
    ||||||||||||||   ||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  40222102 tgttgtgaattcgg---caaattccaaacttcacatcaatgaaatttagatttgtggagaaagtatcaatggcaaccaacaaccaaa 40222019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 559
Target Start/End: Complemental strand, 6599130 - 6599017
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||||  ||||||||||||    
T  6599130 agttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatcaatgagttcttacaaaagtatac-aaatgggttacaagaaat 6599033  T
Q  544 tagcttcaacaagctc 559  Q
    |||||| |||||||||    
T  6599032 tagcttaaacaagctc 6599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 445 - 559
Target Start/End: Complemental strand, 6674583 - 6674470
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||||  ||||||||||||    
T  6674583 agttcggtccaact-tgacctaatatgggggagagattgatctctctaatccactatcaatgagttcttacaaaagtatac-aaatgggttacaagaaat 6674486  T
Q  544 tagcttcaacaagctc 559  Q
    |||||| |||||||||    
T  6674485 tagcttaaacaagctc 6674470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 431 - 544
Target Start/End: Original strand, 3073870 - 3073981
Alignment:
Q  431 agaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaat 529  Q
    ||||||||| | | ||||||| |||||  ||||||||| ||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||     
T  3073870 agaaatgtttacccagttcggcccaact-tgacctactatgg-ggagagattgatctctccaagccattatcaatgagttcttacaaagagatacaaaaa 3073967  T
Q  530 tagttacaagaaatt 544  Q
    | |||||||||||||    
T  3073968 t-gttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 525
Target Start/End: Complemental strand, 4733864 - 4733784
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagataca 525  Q
    |||||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  4733864 agttcggtccaact-tgacctaatctgggggagagatcgatctctccaatccactatcaatgaattcttacaaagagataca 4733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 517
Target Start/End: Original strand, 4743224 - 4743296
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  4743224 agttcggtccaact-tgacctactttgggggagagattgatctctccaatccactatcaatgagttcttacaaa 4743296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 25690122 - 25690009
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  25690122 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 25690025  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  25690024 tacaagaaattagctt 25690009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 464
Target Start/End: Complemental strand, 10240411 - 10240263
Alignment:
Q  317 ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaacc-aaaggataaacaagatnnnnnnngtagagaa 415  Q
    |||||| |||||||||||||||||||||| ||||||||  || || | || |||||||||||| |||| |||  |||||||||||       ||  ||||    
T  10240411 ccacaaacaataacaacaatctagatctaatctagaaacgaaatgtaaagcaaaaccacaatcgaaccaaaaaaataaacaagataaagagagtgaagaa 10240312  T
Q  416 aagataacaacaccaagaaatgttcatctagttcggtccaacaatgacc 464  Q
    |||| ||||| ||||||||||||| | |||||| | |||||||||||||    
T  10240311 aagagaacaaaaccaagaaatgtttacctagtttgatccaacaatgacc 10240263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 2999723 - 2999806
Alignment:
Q  356 caagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgtt 439  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||       |||||||||||||| ||||| |||||||||||    
T  2999723 caagtgcatagcaaaatcacaatctaaccaaagaataaacaagataaagagagtagagaaaagatatcaacatcaagaaatgtt 2999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 549
Target Start/End: Complemental strand, 9765902 - 9765800
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||| | ||||||| ||||| |||||||   | |||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  9765902 agttcggtccaata-tgacctaatctgggggagagagc-agctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 9765806  T
Q  544 tagctt 549  Q
    ||||||    
T  9765805 tagctt 9765800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 15691146 - 15691105
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtat 286  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15691146 caaacctcacatcaatgaaatttagattcgtggagcaagtat 15691105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 445 - 560
Target Start/End: Original strand, 8965701 - 8965815
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| ||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||   |||| |||||||    
T  8965701 agttcggtccaact-tgacctaatatgggggagagatttatctctccgatgcactatcaatgagttcttacaaagagatataaaa-gggttataagaaat 8965798  T
Q  544 tagcttcaacaagctca 560  Q
    || ||||||||| ||||    
T  8965799 taacttcaacaaactca 8965815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 1822423 - 1822335
Alignment:
Q  474 ggagagattgatctctccaatccactataa-tgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||| |||||| | |||||| || ||||| ||||| ||||   ||||||||||||||||||||||||||||||    
T  1822423 ggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagg-gttacaagaaattagcttcaacaagctcac 1822335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 1856868 - 1856780
Alignment:
Q  474 ggagagattgatctctccaatccactataa-tgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||| |||||| | |||||| || ||||| ||||| ||||   ||||||||||||||||||||||||||||||    
T  1856868 ggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagg-gttacaagaaattagcttcaacaagctcac 1856780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 556
Target Start/End: Complemental strand, 11137320 - 11137073
Alignment:
Q  311 aaattaccacaagcaataacaaca-atctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngt 409  Q
    |||| ||||||||||| || |||| ||||| ||||| ||||| || |||||  | ||||||||||||||| |||||| | |||||||||||       ||    
T  11137320 aaataaccacaagcaacaataacatatctaaatctaatctagcaatcaagtataaagaaaaaccacaatcgaaccaatgaataaacaagataaagagagt 11137221  T
Q  410 agagaaaagataacaaca-ccaagaaatgttcatc-tagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatga 506  Q
    |||||||| | ||||||| | ||||| | || | | ||||||||||||||||||||||||| | |||||| ||   || |||||||| |||||| |||||    
T  11137220 agagaaaacaaaacaacatcaaagaattctttaccttagttcggtccaacaatgacctactat-gaggag-ga---atatctccaattcactatcaatga 11137126  T
Q  507 g----ttcttacaaagagatacaaaattagttacaagaaattagcttcaacaag 556  Q
    |    || ||||||||||||||||||   |||| ||||||||||||||||||||    
T  11137125 gtttttttttacaaagagatacaaaa-cggttataagaaattagcttcaacaag 11137073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 38864017 - 38863961
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 501  Q
    ||||||||| |||||| ||||||| || ||| |||||||||||||||||||||||||    
T  38864017 agttcggtctaacaataacctactatgcaggggagattgatctctccaatccactat 38863961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 40328643 - 40328595
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  40328643 ctcacccaagttgctcacaaaagactctacactcatgtgtttcccatcc 40328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 15290683 - 15290614
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  15290683 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 15290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 15471052 - 15470983
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  15471052 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 15470983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 42575333 - 42575402
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  42575333 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 42575402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 40221609 - 40221564
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||    
T  40221609 ctcacctaagttgctcacaaaagactctccactcatgtgtttccca 40221564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 561
Target Start/End: Original strand, 3231872 - 3231921
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||  |||| || ||||||||||||||||||||||    
T  3231872 ttacaaagagatacaaaatg-gttaaaaaaaattagcttcaacaagctcac 3231921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 561
Target Start/End: Complemental strand, 10929872 - 10929842
Alignment:
Q  531 agttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||||||    
T  10929872 agttacaagaaattagcttcaacaagctcac 10929842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 526
Target Start/End: Complemental strand, 10929907 - 10929865
Alignment:
Q  485 tctctccaatccactat-aatgagttcttacaaagagatacaa 526  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  10929907 tctctccaatccactatcaatgagttcttacaaagagttacaa 10929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 559
Target Start/End: Complemental strand, 30909487 - 30909413
Alignment:
Q  484 atctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    ||||||||||| |||||| || ||||  |||||||||||||||||   |||||||||||||||| || |||||||||    
T  30909487 atctctccaattcactatcaacgagtcattacaaagagatacaaag--agttacaagaaattagtttaaacaagctc 30909413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 605
Target Start/End: Original strand, 2999828 - 2999872
Alignment:
Q  561 cccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||| |||| ||||||| ||||||||||||| |||||    
T  2999828 cccaagttgctcacaattgactctctactcatgtgtttctcatcc 2999872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 561
Target Start/End: Complemental strand, 10240256 - 10240197
Alignment:
Q  502 aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||| |||||||||| ||| ||  ||||||||||||||| ||||||||||||||    
T  10240256 aatgagttctttacaaagagatccaacatg-gttacaagaaattagattcaacaagctcac 10240197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 46860857 - 46860517
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  46860857 tgttgtgaattcgatctcaaattccaaacatcacatcaatgaaatttagattcgtggagcaaatatcaatggcaaccaataaccaaatgtaaataaccac 46860758  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 420  Q
    || ||| ||||||||| |||| ||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||       ||| |||||||||    
T  46860757 aaacaacaacaacaatatagacctaatctataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagagtaaagaaaagat 46860658  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  46860657 aacaacaccaaaaaatgttcatccaattcggtccaacaatgacctactctggaggaaagattgatctctccaatccactatcaatgagttattacaaaga 46860558  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| ||||  ||||||||||||||||||||||||||||||    
T  46860557 gatac-aaatgggttacaagaaattagcttcaacaagctcac 46860517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 222 - 561
Target Start/End: Original strand, 41819310 - 41819648
Alignment:
Q  222 tgttgtgaattcggactcaaatt-caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||   |||    
T  41819310 tgttgtgaattgggtctcaaatttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaacaaccaaaagtaaat---cac 41819406  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga- 419  Q
    |||||| ||||||||| |||| |||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||||       |||||||||| |     
T  41819407 aagcaacaacaacaatatagacctagtccataaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagaaagtagagaaaaaaa 41819506  T
Q  420 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaaga 519  Q
    |||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41819507 taacaacaccaataaatgttcacccagtttggtccaacaatgacctactctggaggagagattgatgtctccaatccactataatgagttcttacaaaga 41819606  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||  ||||||||||||||||||  ||||||||||    
T  41819607 gatacaaaatgggttacaagaaattagcttagacaagctcac 41819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 221 - 561
Target Start/End: Complemental strand, 36019233 - 36018895
Alignment:
Q  221 atgttgtgaattc-ggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacc 318  Q
    ||||||||||||| |||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  36019233 atgttgtgaattccggactcaaatcccaaacttcatatcaatgaaatttagattcgtggagcaagtatcaatcacaaccaataatcaaatgtaaattacc 36019134  T
Q  319 acaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaag 418  Q
    |||||||| || ||||||||||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||       ||||| |||||    
T  36019133 acaagcaacaataacaatctagatctaatctagaaaacaagtgtttaacaaaaccacaatctaaccaaaggataaacaagataaagagagtagaaaaaag 36019034  T
Q  419 ataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaag 518  Q
    ||||||||||||| ||||||||||| |||||||||||||||  || ||  |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  36019033 ataacaacaccaaaaaatgttcatccagttcggtccaacaa--acata--ctgggggagagattgacctctccaatccactataatgagttcttacaaag 36018938  T
Q  519 agatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  36018937 agatacaaaatgagttacaagaaattaacttcaacaagctcac 36018895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 49199303 - 49199595
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  49199303 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaacc 49199402  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 469  Q
    |||||||||||||||||||||||||||       |||||||||   ||| ||||||||||||| | |||||| | ||||||||||||| |||||||| ||    
T  49199403 acaatctaaccaaaggataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctagtc 49199502  T
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  49199503 tggaggagagattaatctctccaatccactatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcac 49199595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 43401635 - 43401927
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |    
T  43401635 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcatagcaaaatc 43401734  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 469  Q
    |||||||||||||||||||||||||||       |||||||||   ||| ||||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  43401735 acaatctaaccaaaggataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactc 43401834  T
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  43401835 tggaggagagattaatttctccaatccactatcaatgagttcttacaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcac 43401927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 43403578 - 43403870
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  43403578 gtggagcaagtatcaatggcaaccaataaccaaatgtaaataaccacaagcaataataacaatctagatctaatctagaaaacaagtgcatagcaaaacc 43403677  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaa---agataacaacaccaaga-aatgttcatctagttcggtccaacaatgacctactc 469  Q
    |||||||||||||||||||||||||||       || ||||||   | | ||||||| ||||| | |||||| | ||||||||||||| |||||||||||    
T  43403678 acaatctaaccaaaggataaacaagataaagagagtggagaaaaataaacaacaacatcaagagattgttcacccagttcggtccaaccatgacctactc 43403777  T
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||    
T  43403778 tggaggagagattaatctctccaatccactatcaatgagttcttacaaagagataaaacatgagttacaagaaatgagcttcaacaagctcac 43403870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 274 - 552
Target Start/End: Original strand, 6095438 - 6095715
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||  ||||| |||| ||||||    
T  6095438 gtggagcaagtatcaatggcaaccaataatcaaatgtaaataaccacaagcaataacaacaatatagacctagtctataaacgaagtgtatagcaaaacc 6095537  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 473  Q
    |||||| |||||| | |||||||||||       ||| ||||||||||||||||||||||||||||||   |||||||||||||  ||||||||||||||    
T  6095538 acaatccaaccaaggcataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacacagttcggtccaac-ttgacctactctgga 6095636  T
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||| ||||||    
T  6095637 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattaacttcaa 6095715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 274 - 527
Target Start/End: Original strand, 55301808 - 55302064
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaac-aagtgcatagaaaaa 371  Q
    |||||||||||||||||| |||||||||||||||||| ||| | ||||||||||||| ||||||||||||||| |||||||||| |||||||||| |||     
T  55301808 gtggagcaagtatcaatgacaaccaataaccaaatgtgaataaaccacaagcaataaaaacaatctagatctaatctagaaaaccaagtgcatagcaaag 55301907  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    |||||||  ||||||||||||||||||||       ||| ||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| ||    
T  55301908 ccacaattcaaccaaaggataaacaagataaagagagtaaagaaaagataacaacactaagaaatgttcaccaagttcggtccaacaatgacctactatg 55302007  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 527  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  55302008 gaggagagattgatctctccaatccactatcaatgaattcttacaaagagatacaaa 55302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 30236456 - 30236168
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 372  Q
    |||||||||||||||||| ||||||| |||||||  |  |||| |||||||||| ||||||||| |||| |||||||| ||| ||||||||||  ||||     
T  30236456 gtggagcaagtatcaatgtcaaccaacaaccaaaaattgattaaccacaagcaacaacaacaatatagacctagtctataaaccaagtgcataacaaaaa 30236357  T
Q  373 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcatctagttcggtccaacaatgacctactctg 471  Q
    ||||||| |||||| | |||||||||||       ||| |||||||||||||||||||||||| |||| | |||||||||||||||  ||||||| ||||    
T  30236356 cacaatccaaccaaggtataaacaagataaagagagtaaagaaaagataacaacaccaagaaattgttgacctagttcggtccaac-ttgacctaatctg 30236258  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  30236257 ggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaagctcac 30236168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 277 - 561
Target Start/End: Complemental strand, 54594033 - 54593747
Alignment:
Q  277 gagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccaca 376  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||| ||||  ||||||| ||| || |||||||| |||||||||    
T  54594033 gagcaagtatcaatgacaaccaataaccaaatataaataaccacaagcaataacaagaatatagacatagtctataaaccatgtgcatagcaaaaccaca 54593934  T
Q  377 atctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 473  Q
    ||| ||   ||||| ||||||||||       |  || |||||||||||||||||||||||||||||| | |||| ||||||||  |||| |||||||||    
T  54593933 atccaaagcaaggaataaacaagataaagagagactaaagaaaagataacaacaccaagaaatgttcacccagtttggtccaact-tgacatactctgga 54593835  T
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||    
T  54593834 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaataaattagcttcaacaagctcac 54593747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 46173738 - 46173400
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtg--gagcaagtatcaatggcaaccaataaccaaatgtaaattacca 319  Q
    ||||||||||||||  |||| | ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||   |||    
T  46173738 tgttgtgaattcgg--tcaattccaaacttcacatcaatgaaatttagattcgtgtggagcaagtatcaatggcaaccaacaaccaaa-gtaaa---cca 46173645  T
Q  320 caagcaataacaacaatctagat--ctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtaga-gaaa 416  Q
    ||||||| | ||| ||| || |   ||| |||| ||| ||||||||||| |||||||||||| ||| ||   |||||||||||       | | | ||||    
T  46173644 caagcaacagcaataatatataaacctattctataaaccaagtgcatagcaaaaccacaatccaactaagaaataaacaagataaagaaagcaaaagaaa 46173545  T
Q  417 agataacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac 514  Q
    |||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  46173544 agataacaacaccaagaaattgttgatctagttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgaattcttac 46173446  T
Q  515 aaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  46173445 aaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 46173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 412 - 561
Target Start/End: Complemental strand, 4570144 - 4569995
Alignment:
Q  412 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 510  Q
    |||||| ||||||||||||||||||||| | | ||||||||||||   | ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4570144 agaaaatataacaacaccaagaaatgttgacccagttcggtccaaacttcacctactctggagtagagattgatctctccaatccactatcaatgagttc 4570045  T
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  4570044 ttacaaagagatac-aaatgagttacaagaaattagcttcaataagctcac 4569995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 34491379 - 34491255
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  34491379 tgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagtt 34491282  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||    
T  34491281 acaagaaattagcttcaacaagctcac 34491255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 7762433 - 7762308
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  7762433 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 7762335  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||| ||||    
T  7762334 acaagaaattagcttcaacaagttcac 7762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 32891282 - 32891147
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||| || ||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  32891282 acaccaagaaatgattatccagttcggtccaaca-tgacctactccgggggagagatttatctctccaatccactatcaacgagttcttacaaagagata 32891184  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||| | |||||||||||||||||||||||||||||||    
T  32891183 caaa-tgagttacaagaaattagcttcaacaagctcac 32891147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 354 - 545
Target Start/End: Complemental strand, 40913546 - 40913352
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacaccaagaaat-gttcatctagttc 449  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||   || || |||||||||| || ||| | | |||||    
T  40913546 aacaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagattagagaaaaatagacaataacaccaagagattgttgacccagttc 40913447  T
Q  450 ggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 545  Q
    ||||||||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||    
T  40913446 ggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcgatgagttcttacaaagagatac-aaatgagttacaagaaatta 40913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 47304583 - 47304294
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||| ||||||| ||||||| ||||||   ||||||||| ||||| ||| |||| |||||||| ||| ||||||||||| ||||||    
T  47304583 gtggagcaagtatcaatgacaaccaacaaccaaa-gtaaat---cacaagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaacc 47304488  T
Q  374 acaatctaaccaaaggataaacaagatnnnnnnngtaga------gaaaagataacaacaccaagaaat-gttcatctagttcggtccaacaatgaccta 466  Q
    |||||| ||| || | |||||||||||       | | |      ||||||||||||||||||| |||| ||| | | ||||||||| |||  |||||||    
T  47304487 acaatccaactaaggaataaacaagataaagaaagcaaaagaaaagaaaagataacaacaccaataaattgttgacccagttcggtcaaact-tgaccta 47304389  T
Q  467 ctctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
     ||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||  ||||||||| |||| |||||||||||||||    
T  47304388 atcttggggagagattgatctctccaatccactatcaatgagttcttacgaagagatac-agatgggttacaagatattaacttcaacaagctcac 47304294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 7764608 - 7764507
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||| |    
T  7764608 tgacctactctggaggagagattcatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttacaagaaattagctttaacaagtt 7764510  T
Q  559 cac 561  Q
    |||    
T  7764509 cac 7764507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 9581450 - 9581325
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||    
T  9581450 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggtt 9581352  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    | ||||||||||||| |||||||||||    
T  9581351 aaaagaaattagcttaaacaagctcac 9581325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 40735541 - 40735426
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  40735541 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaactggttacaataaat 40735444  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  40735443 tagcttcaacaagctcac 40735426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 19683889 - 19684002
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  19683889 tgttcacccagttcggtccaaacttgacctactatggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 19683987  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  19683988 acaagaaattagctt 19684002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 29811012 - 29810911
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  29811012 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 29810914  T
Q  559 cac 561  Q
    |||    
T  29810913 cac 29810911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 45095331 - 45095218
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  45095331 tgttcacccagttcggtccaaacttgacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 45095233  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  45095232 acaagaaattagctt 45095218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 29813221 - 29813106
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||| ||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||  ||||||||||||    
T  29813221 agttcggtccaaca-tgaccaaatctgggggagagattgatctctccaatccactataaatgagttcttacaaagagatgc-aaatgggttacaagaaat 29813124  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  29813123 tagcttcaacaagttcac 29813106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 44331703 - 44331588
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||   |||||||||||    
T  44331703 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaataagttcttacaaagagatac-aaatggcttacaagaaat 44331606  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  44331605 tagcttcaacaagctcac 44331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 51398972 - 51398857
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  51398972 agttcggtccaact-tgacctaatctgggggagagataaatctctccaatccactatcaatgagttcttacaaagagatacaaa-tgagttacaagaaat 51398875  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  51398874 tagcttcaacaagttcac 51398857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 53921493 - 53921628
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    |||| |||||||||| ||| ||||||||| |||  ||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||  ||||    
T  53921493 acactaagaaatgtttatccagttcggtcaaact-tgatctactccgggggagagattgatctctccaatccactatcaatgagttcttacaaaatgata 53921591  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | |||| ||||||||||||||||||| |||||||||||    
T  53921592 c-aaatgagttacaagaaattagctttaacaagctcac 53921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 760991 - 760890
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||||    
T  760991 tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaattagcttaaacaagct 760893  T
Q  559 cac 561  Q
    |||    
T  760892 cac 760890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 558
Target Start/End: Complemental strand, 16499187 - 16499075
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  16499187 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 16499090  T
Q  544 tagcttcaacaagct 558  Q
    |||||||||||||||    
T  16499089 tagcttcaacaagct 16499075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 460 - 549
Target Start/End: Complemental strand, 37408602 - 37408513
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  37408602 tgacctactctggaggagagattgatctcttcaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 37408513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 22835012 - 22835127
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  22835012 agttcggtccaact-tgacctaatatggcggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 22835109  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  22835110 tagcttaaacaagctcac 22835127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 40734656 - 40734541
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  40734656 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgtgttacaagaaat 40734559  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| ||||||||||||||    
T  40734558 taggttcaacaagctcac 40734541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 801260 - 801148
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  801260 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaatgagttcttacaaaagagatacaaaaagagt 801161  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  801160 tacaagaaattag 801148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 44700487 - 44700603
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||    
T  44700487 ctagttcggtccaact-tgacctaatgtgg-ggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaataggttacaagaa 44700583  T
Q  542 attagcttcaacaagctcac 561  Q
    |||||||||||||| |||||    
T  44700584 attagcttcaacaaactcac 44700603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 5258144 - 5258257
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  5258144 tgttcaccaagttcggtccaaacttgacctactctggagaagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 5258242  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  5258243 acaagaaattagctt 5258257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 559
Target Start/End: Complemental strand, 20938032 - 20937701
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    |||||||||||||||| |   | |||| ||||||||| | ||||||||||| ||||  |||||||||||| |||| ||||| ||||     || || |||    
T  20938032 tgttgtgaattcggacac---tccaaatctcacatcagtaaaatttagatttgtgggacaagtatcaatgacaactaataagcaaa-----ataactaca 20937941  T
Q  322 agcaataacaacaa-tctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagat 420  Q
    ||||  |||||||| |||||||||| ||||  || |||||| | || |||| ||||||| |||||||  |||||||||||       ||||||||||||     
T  20937940 agcagcaacaacaaatctagatctaatctattaatcaagtgtaaagtaaaatcacaatcgaaccaaataataaacaagataaagagagtagagaaaagag 20937841  T
Q  421 aacaacaccaagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaa 517  Q
    ||| |||| ||  ||| ||| | ||||||| ||||||| ||||| |||| ||| |||  ||||||||||||||||| | ||| ||||||||| || ||||    
T  20937840 aaccacacaaaataattgtttacctagttctgtccaactatgacatactttgggggaacgattgatctctccaatcta-tatcaatgagttcttttcaaa 20937742  T
Q  518 gagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    |||||||||||   |||||||||||||| |||||||||||||    
T  20937741 gagatacaaaa-gggttacaagaaattaacttcaacaagctc 20937701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 23197939 - 23198052
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||   |||    
T  23197939 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaaagatacaaaa-gggtt 23198037  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  23198038 acaagaaattagctt 23198052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 23200138 - 23200251
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||   |||    
T  23200138 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaattcactatcaatgagttcttacaaaaagatacaaaa-gggtt 23200236  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  23200237 acaagaaattagctt 23200251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 39153385 - 39153486
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||    
T  39153385 tgacctaatctgggggagagattgttctctccaatccactatcaatgagttcttataaagggatac-aaatgagttacaagaaattagcttaaacaagct 39153483  T
Q  559 cac 561  Q
    |||    
T  39153484 cac 39153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 29196396 - 29196511
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||||||    
T  29196396 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttccaagaaat 29196493  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||  ||||||||||    
T  29196494 tagctttgacaagctcac 29196511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 5260323 - 5260436
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||   |||    
T  5260323 tgttcaccaagttcggtccaaacttgacctactttggagaagagattgaactctccaatccactatcaatgagttcttccaaagagatacaaaa-gggtt 5260421  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  5260422 acaagaaattagctt 5260436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 7780028 - 7780114
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattag 546  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   |||||||||||||||    
T  7780028 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa--ggttacaagaaattag 7780114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 29682517 - 29682402
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||| ||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  || |||||||||    
T  29682517 agttcggtccaact-tgatctaatctaggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggtgacaagaaat 29682420  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  29682419 tagcttaaacaagctcac 29682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 31314603 - 31314488
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| ||||| |||||||||||||||||||||| || ||||||||||||| ||||||||| |  ||||||||||||    
T  31314603 agttcggtccaact-tgacctaatatgggggagatattgatctctccaatccactatcaaagagttcttacaaaaagatacaaa-tgggttacaagaaat 31314506  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  31314505 tagcttcaacaagatcac 31314488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 32744446 - 32744561
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| ||| ||||| |||||| ||||||||||| || |||||||||||||| |||||||| | |||||||||||||    
T  32744446 agttcggtccaact-tgacctaatctgggggatagatttatctcttcaatccactatcaaagagttcttacaaagtgatacaaa-tgagttacaagaaat 32744543  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  32744544 tagcttaaacaagctcac 32744561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 262 - 397
Target Start/End: Original strand, 5433774 - 5433905
Alignment:
Q  262 aaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtc-tagaaaacaagt 360  Q
    |||||||||||||||||||||||||||||| |||||||||||||||     || ||||||||||| |||||||||||||  ||| || || ||  ||| |    
T  5433774 aaatttagattcgtggagcaagtatcaatgacaaccaataaccaaa-----ataaccacaagcaacaacaacaatctagtcctaatcatataagtcaaat 5433868  T
Q  361 gcatagaaaaaccacaatctaaccaaaggataaacaa 397  Q
    | |||| |||||||||||| |||||||| ||||||||    
T  5433869 gtatagcaaaaccacaatcgaaccaaagaataaacaa 5433905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 274 - 400
Target Start/End: Original strand, 31340064 - 31340186
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||| ||||||||||||||||| ||||||| |||||   |||||||||| ||||| ||| |||| |||||||| ||| ||||||||||| ||||||    
T  31340064 gtggagcatgtatcaatggcaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatagacctagtctataaaccaagtgcatagcaaaacc 31340159  T
Q  374 acaatctaaccaaaggataaacaagat 400  Q
    |||||| ||| || | |||||||||||    
T  31340160 acaatccaactaaggaataaacaagat 31340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 546
Target Start/End: Original strand, 9636150 - 9636236
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattag 546  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||   |||||||||||||||    
T  9636150 tgacctactttggaggagagattgaactctccaatccactatcaatgagttcttacaaaaagatacaaaa-gggttacaagaaattag 9636236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 5236481 - 5236581
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| ||| ||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |    
T  5236481 tgacctaatctgg-ggaaagattgatctctcgaatccattatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagtt 5236578  T
Q  559 cac 561  Q
    |||    
T  5236579 cac 5236581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 425 - 559
Target Start/End: Complemental strand, 33192009 - 33191877
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagat 522  Q
    ||||||| ||||||| | | ||||  ||||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||| ||    
T  33192009 acaccaaaaaatgtttaccaagttttgtccaacaatgacctcctctggag-agagattgatctctctaatccactatcaatgagttctttacaaagacat 33191911  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctc 559  Q
    | ||   | |||||||||| |||||||||||||||||    
T  33191910 aaaa---tggttacaagaacttagcttcaacaagctc 33191877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 9666476 - 9666591
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  | ||||| ||||| ||||||||  |||||||||||||||||| || || ||||||||||||| || ||| | |||||||||||||    
T  9666476 agttcggtccaacttt-acctaatctgggggagagatcaatctctccaatccactatcaaagaattcttacaaagaggtataaa-tgagttacaagaaat 9666573  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  9666574 tagcttcaacaagctcac 9666591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 562
Target Start/End: Original strand, 35138694 - 35138832
Alignment:
Q  424 aacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagaga 521  Q
    |||||||||||||||| |||   |||||| ||||||||||||||| | | || ||||||| ||||| | ||||||||| ||||||||| |||||||||||    
T  35138694 aacaccaagaaatgtttatccgattcggttcaacaatgacctacttttg-ggggagattgttctcttccatccactatcaatgagttctttacaaagaga 35138792  T
Q  522 tacaaaattagttacaagaaattagcttcaacaagctcacc 562  Q
    |||||||  |||| |||||||||| ||||||||| ||||||    
T  35138793 tacaaaa-gagttgcaagaaattaacttcaacaaactcacc 35138832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 445 - 545
Target Start/End: Original strand, 4055773 - 4055874
Alignment:
Q  445 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaa 541  Q
    ||||||| ||||||||||||||| ||||| |||||||  ||||||| ||||||||||| |||||||| |||||||||||||||||||   ||||||||||    
T  4055773 agttcggcccaacaatgacctacatctgggggagaga--gatctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaa 4055870  T
Q  542 atta 545  Q
    ||||    
T  4055871 atta 4055874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 6716667 - 6716554
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  6716667 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 6716570  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  6716569 tacaagaaattagctt 6716554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 54635292 - 54635179
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  54635292 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 54635195  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  54635194 tacaagaaattagctt 54635179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 561
Target Start/End: Original strand, 31340268 - 31340326
Alignment:
Q  502 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  31340268 aatgagttcttacaaagagatacaaa-tgagttacatgaaattagcttcaacaagctcac 31340326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 445 - 517
Target Start/End: Complemental strand, 45283145 - 45283071
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa 517  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  45283145 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaa 45283071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 396
Target Start/End: Complemental strand, 5270723 - 5270580
Alignment:
Q  250 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtc 348  Q
    ||||||||||||||||||| |||| ||| | || |||||||| ||||||||||| |||    ||  ||||||||||| ||||| | ||||||||||| ||    
T  5270723 ctcacatcaatgaaatttatattcatggtgaaaatatcaatgacaaccaataacaaaa----aaaaaccacaagcaacaacaatagatctagatctaatc 5270628  T
Q  349 tagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaaca 396  Q
    ||| || |||||| |  | |||||||||||| |||||||| |||||||    
T  5270627 tagcaaccaagtgtaatgcaaaaccacaatcgaaccaaagaataaaca 5270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 23391919 - 23392034
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| ||||||||| |||||| ||||||||||| || |||||||| ||||| ||||| ||||  ||||||||||||    
T  23391919 agttcggtccaact-tgacctaatttgggggagagatttatctctacaatccactatcaaagagttcttgcaaagtgatac-aaatgggttacaagaaat 23392016  T
Q  544 tagcttcaacaagctcac 561  Q
    || ||| |||||||||||    
T  23392017 tatcttaaacaagctcac 23392034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 408 - 562
Target Start/End: Complemental strand, 39127745 - 39127589
Alignment:
Q  408 gtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatcca-ctat-aatg 505  Q
    |||||||||| | || || | ||||||| ||| ||  ||||| ||||||||||||||| ||||||||||||||||||||| || ||||||  ||| ||||    
T  39127745 gtagagaaaaaagaataatatcaagaaaagtttattaagttcagtccaacaatgacctgctctggaggagagattgatctttcaaatccatttatcaatg 39127646  T
Q  506 agtt-cttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcacc 562  Q
    ||||  |||| || ||||||||||  |  || ||||||||||||||||||||||||||    
T  39127645 agttatttacgaaaagatacaaaa-aaactataagaaattagcttcaacaagctcacc 39127589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 445 - 545
Target Start/End: Original strand, 4075480 - 4075581
Alignment:
Q  445 agttcggtccaacaatgacctac-tctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaagaa 541  Q
    ||||||| ||||||||||||||| ||||| ||||||  |||||||||||||||||||| || ||||| ||||||||| |||||||||   ||||||||||    
T  4075480 agttcggcccaacaatgacctacatctgggggagag--tgatctctccaatccactatcaaagagtttcttacaaagtgatacaaaagaggttacaagaa 4075577  T
Q  542 atta 545  Q
    ||||    
T  4075578 atta 4075581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 455 - 561
Target Start/End: Original strand, 5433901 - 5434001
Alignment:
Q  455 aacaatgacctactctggaggagagattgatctctccaatccactataatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaac 553  Q
    |||||||||||||| |||||||||||||||||||||||||||||        |||| ||||||||||||| ||||   |||||||||||||||||| |||    
T  5433901 aacaatgacctactatggaggagagattgatctctccaatccac------cggttctttacaaagagatataaaa-gggttacaagaaattagctttaac 5433993  T
Q  554 aagctcac 561  Q
    ||||||||    
T  5433994 aagctcac 5434001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 27305720 - 27305775
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 501  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  27305720 agttcggtccaa-attgacctactttggaggagagattgatctctccaatccactat 27305775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 28074480 - 28074432
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  28074480 ctcacctaagtttctctcaatagactctccactcatgtgtttcccatcc 28074432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 3617618 - 3617540
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  3617618 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 3617540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 25637586 - 25637517
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25637586 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25637517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 4569815 - 4569770
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  4569815 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 4569770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 46860335 - 46860287
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||    
T  46860335 ctcacccaagttgctcacaaatgactctccactcatgtgtttcccatcc 46860287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 561
Target Start/End: Original strand, 51352150 - 51352235
Alignment:
Q  475 gagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||| |||||||| | |||||||| ||||||||| |||||||  | |||||||||||||| ||| || ||||||||    
T  51352150 gagagattgatctctcaaatccactctcaatgagttattacaaagaaatacaaa--tggttacaagaaattaactttaaaaagctcac 51352235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 4598532 - 4598601
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  4598532 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 4598601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 10056378 - 10056309
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10056378 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10056309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 10058600 - 10058531
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10058600 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10058531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 10060822 - 10060753
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10060822 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 10063044 - 10062975
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10063044 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10062975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 10065266 - 10065197
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10065266 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10065197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 10211554 - 10211485
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10211554 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10211485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 23410353 - 23410454
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| | ||| ||||||||| |||||||||||||| |||  | |||||||||||||| ||||| ||||  |||| | ||||||||||| ||||||||    
T  23410353 tgacctaatttgggggagagatttatctctccaatccattatctaagagttcttacaaagtgatac-aaatgggttatacgaaattagcttaaacaagct 23410451  T
Q  559 cac 561  Q
    |||    
T  23410452 cac 23410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 6095903 - 6095948
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||    
T  6095903 ctcacccaagttgctcacaaatgactctccactcatgtgtttccca 6095948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 2075065 - 2075140
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 501  Q
    ||||| ||||||||| | | |||||| ||||||  ||||||||||| | ||||||||||||||||| ||||||||||    
T  2075065 acacccagaaatgtttacccagttcgatccaact-tgacctactctcggggagagattgatctctcaaatccactat 2075140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 36018715 - 36018667
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    |||||||||||||||| |||  ||||||||| |||||||||||||||||    
T  36018715 ctcacccaagttgctcacaaatgactctccattcatgtgtttcccatcc 36018667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 54593569 - 54593521
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcccatcc 605  Q
    ||||| |||||||||| ||| ||||||||||||||||||||| ||||||    
T  54593569 ctcactcaagttgctcacaaaagactctccactcatgtgttttccatcc 54593521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 600
Target Start/End: Original strand, 5434181 - 5434224
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcc 600  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||    
T  5434181 ctcacccaacttgctcacaaaagactctccactcatgtgtttcc 5434224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 10209319 - 10209265
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  10209319 tgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 10209265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 4600753 - 4600822
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   ||||||||||| |||||||| |||  ||||||||||||||||  |||||||||||    
T  4600753 agttcggtccaaacttgacctactctagaggagagtttgtactctccaatccactatcaaatgagttctt 4600822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 602
Target Start/End: Original strand, 49199778 - 49199820
Alignment:
Q  560 acccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||    
T  49199778 acccaagttgctcacaaaagactctccactcatatgtttccca 49199820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 34491077 - 34491036
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  34491077 ctcacccaagttgctcacaaatgactctccactcatgtgttt 34491036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 40913203 - 40913158
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||    
T  40913203 ctcacccaatttgctcacaaatgactctccactcatgtgtttccca 40913158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 598
Target Start/End: Original strand, 43404037 - 43404078
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  43404037 ctcacccaagttgctcccaaatgactctccactcatgtgttt 43404078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 1683824 - 1683768
Alignment:
Q  250 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaa 306  Q
    ||||||||||||||||||||||  ||||  |||  ||||||| ||||||||||||||    
T  1683824 ctcacatcaatgaaatttagatgtgtgggacaaacatcaatgacaaccaataaccaa 1683768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 555
Target Start/End: Complemental strand, 24635345 - 24635306
Alignment:
Q  515 aaagagatacaaaattagttacaagaaattagcttcaacaa 555  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  24635345 aaagagatacaaaat-agttacaaaaaattagcttcaacaa 24635306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 559
Target Start/End: Original strand, 25491003 - 25491091
Alignment:
Q  470 tggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    |||||||||||  |||||||||| | |||||| ||||| ||||| ||||||||||||||||  ||| | ||||||| |||||||||||||||    
T  25491003 tggaggagaga--gatctctccacttcactatcaatgatttctttacaaagagatacaaaaggagt-ataagaaatcagcttcaacaagctc 25491091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 191; Significance: 1e-103; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 224 - 560
Target Start/End: Original strand, 27637403 - 27637737
Alignment:
Q  224 ttgtgaattcggactcaaatt-caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaa 322  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| || ||| ||||||| ||||||   |||||    
T  27637403 ttgtgaattcggtctcaaatttcaaacctcacatcaatgaaatttaaattcgtggagcaagtattaatggtaatcaacaaccaaaagtaaat---cacaa 27637499  T
Q  323 gcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataa 422  Q
    |||| ||||||||| |||| |||||||| ||| ||||||||||| |||||||||||| ||| || | |||||||||||       ||| |||||||||||    
T  27637500 gcaacaacaacaatatagacctagtctataaaccaagtgcatagcaaaaccacaatccaactaaggaataaacaagataaagagagtaaagaaaagataa 27637599  T
Q  423 caacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaagagat 522  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27637600 caacaccaagaaatattcacccagttcggtccaacaatgacctactctgcaggagagattgatctctccaatccactataatgagttcttacaaagagat 27637699  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctca 560  Q
    |||||||  ||||||||||||||| || ||||||||||    
T  27637700 acaaaatgggttacaagaaattagtttaaacaagctca 27637737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 277 - 561
Target Start/End: Complemental strand, 213795 - 213508
Alignment:
Q  277 gagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccaca 376  Q
    |||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||| |||| ||||||||  ||  |||||||||| |||||||||    
T  213795 gagcaagtatcaatagcaatcaataaccaaatgtaaaaaaccacaagcaataacaacaatatagacctagtctattaactaagtgcatagcaaaaccaca 213696  T
Q  377 atctaaccaaagga-taaacaagatnnnnnnng--tagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgga 473  Q
    ||| ||   ||||| ||||||||||       |  || || ||||||||||||||||||||||||||| | ||||||||||||   ||||||||| ||||    
T  213695 atcaaaagcaaggaataaacaagataaagagagagtaaaggaaagataacaacaccaagaaatgttcacccagttcggtccaaacttgacctactatgga 213596  T
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  213595 ggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagctttaacaagctcac 213508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 354 - 561
Target Start/End: Complemental strand, 40147510 - 40147304
Alignment:
Q  354 aacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtc 453  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||       ||| ||||||||||| ||||| || ||||||||| | |||||||||    
T  40147510 aacaagtgcataacaaaaccacaattcaaccaaaggataaacaagataaatagagtaaagaaaagataaaaacacaaaaaaatgttcacccagttcggtc 40147411  T
Q  454 caacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40147410 caact-tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaagaaattagcttcaa 40147313  T
Q  553 caagctcac 561  Q
    |||||||||    
T  40147312 caagctcac 40147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 245 - 559
Target Start/End: Complemental strand, 317121 - 316807
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaa----tctag 340  Q
    |||| ||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||     || ||||||||||| |||||| |    |||||    
T  317121 caaatctcacatcaatgaaatttagattcgtgggacaagtatcagtgacaaccaataaccaaa-----ataaccacaagcaacaacaacgacagatctag 317027  T
Q  341 atctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttc 440  Q
    ||||  ||||| || |||||| | || |||||||||||  |||||||| |||||||| ||       |||| ||||||| |||||||| ||||| ||||     
T  317026 atcttatctagcaaccaagtgtaaagcaaaaccacaattgaaccaaagaataaacaaaataaagagagtagggaaaagagaacaacacaaagaattgttt 316927  T
Q  441 atctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaa 538  Q
    | | |||||||||||||||||||||||||| | ||||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||||  | ||||||    
T  316926 accaagttcggtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaagga-ttacaa 316828  T
Q  539 gaaattagcttcaacaagctc 559  Q
    |||||||||||||||||||||    
T  316827 gaaattagcttcaacaagctc 316807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 5058375 - 5058088
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaa--tgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaa 369  Q
    ||||| |||||||||||||||||||| |||||||  ||| ||   |||||||||| ||||||||| ||  || |||||||| ||  ||||||||||| ||    
T  5058375 gtggaacaagtatcaatggcaaccaacaaccaaaaatgttaa---ccacaagcaacaacaacaatatatagacctagtctataat-caagtgcatagtaa 5058280  T
Q  370 aaccacaatctaaccaaagga-taaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctact 468  Q
    ||||| |||| ||   ||||| ||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  |||||||||    
T  5058279 aaccataatccaaagcaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctact 5058181  T
Q  469 ctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  | ||||||||| ||||||||||||||||||    
T  5058180 ctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggatacaagaaaatagcttcaacaagctcac 5058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 222 - 561
Target Start/End: Original strand, 16640737 - 16641062
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    ||||||||||||||||   ||||| |||| |||| ||||| || ||||||||||||||||||||||||||  ||||||          | |||| |||||    
T  16640737 tgttgtgaattcggac---aattctaaacttcacgtcaataaattttagattcgtggagcaagtatcaataacaacca----------gaaaataaccac 16640823  T
Q  321 aagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngt--agagaaaag 418  Q
    |||||| ||||| ||||||||| || |||||||| ||| ||||||  ||||||||||| |||| |||| |||| ||||||       |   | |||||||    
T  16640824 aagcaacaacaaaaatctagatttaatctagaaatcaaatgcataacaaaaccacaatttaactaaagaataagcaagataaatagagagcaaagaaaag 16640923  T
Q  419 ataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactataatgagttcttacaaag 518  Q
    ||||||||||||||||||||| | | ||||||| || ||  |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  16640924 ataacaacaccaagaaatgtttacccagttcggccctact-tgacctactctggaggagagattgatctctccaatccactatca--agttcttacaaag 16641020  T
Q  519 agatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||  |||||  |||||| |||||||||||||||||    
T  16641021 agatacaaaa-gagttatcagaaatcagcttcaacaagctcac 16641062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 13239930 - 13239794
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||| || |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13239930 acaccaaaaattgttcacccagttcggtccaaatttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagata 13239831  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||  |||||||||||||||||||||||||| ||||    
T  13239830 caaaa-gagttacaagaaattagcttcaacaagttcac 13239794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 28278494 - 28278359
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    |||||||||| |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28278494 acaccaagaattgttcacccagttcggtccaact-tgacctactctggaggagagattgatctctccaatccactatcaatgagtttttacaaagagata 28278396  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | ||||  ||||||||||||||||||||||||||||||    
T  28278395 c-aaatgggttacaagaaattagcttcaacaagctcac 28278359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 425 - 560
Target Start/End: Complemental strand, 16452258 - 16452124
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||||| | | |||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  16452258 acaccaagaaatgtttacccagttcggtccaact-tgacctactctgggggagagatttatctctccaatccactatgaatgagttcttacaaagagata 16452160  T
Q  524 caaaattagttacaagaaattagcttcaacaagctca 560  Q
    | ||||  |||||||||||||||||||||||||||||    
T  16452159 c-aaatgggttacaagaaattagcttcaacaagctca 16452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 274 - 527
Target Start/End: Complemental strand, 27015848 - 27015599
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagat--ctagtctagaaaacaagtgcatagaaaaa 371  Q
    ||||||||||||| |||||||| ||| ||||||| ||||||   ||||||||| ||||||||| || ||  |||||||| ||  ||||||||||  ||||    
T  27015848 gtggagcaagtattaatggcaatcaacaaccaaa-gtaaat---cacaagcaacaacaacaatatatatacctagtctataat-caagtgcatatcaaaa 27015754  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    |||||||  |||||||| |||||||||||       ||| |||||| |||||| |||||| ||||||||| | |||||||||||||  ||||||| | ||    
T  27015753 ccacaattcaaccaaagcataaacaagataaagagagtaaagaaaaaataaca-caccaaaaaatgttcacccagttcggtccaact-tgacctattttg 27015656  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaa 527  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  27015655 gaggagagattgatctgtacaatccactatcaatgagttcttacaaagagatacaaa 27015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 37439309 - 37439200
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  37439309 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 37439211  T
Q  535 acaagaaatta 545  Q
    |||||||||||    
T  37439210 acaagaaatta 37439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 9049332 - 9049467
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||| ||||||| ||| | |||||||||||  | ||||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  9049332 acaccaaaaaatgtttatccatttcggtccaact-tcacctactttgggggagatattgatctctccaatccactgtcaatgagttcttacaaagagata 9049430  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||  ||||||||||||||||||||||||||||||    
T  9049431 caaaatg-gttacaagaaattagcttcaacaagctcac 9049467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 538192 - 538068
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||| ||| |||||||||||||  ||||||| | ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||    
T  538192 tgttgatccagttcggtccaact-tgacctaatatgggggagagattgatctctccaatctactatcaatgagttcttacaaagagatacaaa-tgggtt 538095  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||||||||    
T  538094 acaagaaattagcttcaacaagctcac 538068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 460 - 549
Target Start/End: Complemental strand, 25412904 - 25412815
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagctt 549  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||    
T  25412904 tgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gggttacaagaaattagctt 25412815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 13488361 - 13488246
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  13488361 agttcggtccaact-tgacctaatctcggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 13488264  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  13488263 tagcttcaacaagttcac 13488246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 42428440 - 42428555
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  42428440 agttcggtccaact-tgacctaatatgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaat 42428537  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  42428538 tagcttcaacaagttcac 42428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 4160791 - 4160701
Alignment:
Q  412 agaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactata 502  Q
    ||||||||||||||||| || |||| || | | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4160791 agaaaagataacaacactaataaatatttacccagtttggtccaacaatgacctactctggaggagagattgatctctccaatccactata 4160701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 13343228 - 13343116
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  | ||    
T  13343228 tgttcacccagttcggtccaaacatgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaagga-tt 13343131  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  13343130 acaagaaattagctt 13343116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 36074043 - 36074155
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||||| ||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  36074043 tgttcatccagttcggtccaaacttgacctactttggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 36074140  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  36074141 acaagaaattagctt 36074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 40751308 - 40751195
Alignment:
Q  269 gattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaa 368  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||||| |||| ||| |||| ||| ||||||||||| |    
T  40751308 gatttgtggagtaagtatcaatgacaaccaataaccaaatgtaaa---ccacaagcaataacaacaatatagacctaatctataaaccaagtgcatagca 40751212  T
Q  369 aaaccacaatctaacca 385  Q
    |||||||||| ||||||    
T  40751211 aaaccacaatttaacca 40751195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 533927 - 533812
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |  ||||||| ||||    
T  533927 agttcggtccaact-tgacctaatatgggggagagattgatctttccaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaaaaaat 533830  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  533829 tagcttcaacaagctcac 533812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 9789224 - 9789335
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  9789224 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 9789322  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  9789323 tacaagaaattag 9789335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 16409643 - 16409532
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  16409643 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 16409545  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  16409544 tacaagaaattag 16409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 26178050 - 26177939
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  26178050 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 26177952  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  26177951 tacaagaaattag 26177939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 8565954 - 8566071
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||  ||||||||||    
T  8565954 ctagttcggtccaact-tgacctaatctgggtgagagattgatctctccaatccactatcaatgagttcttacagagggatac-aaatgggttacaagaa 8566051  T
Q  542 attagcttcaacaagctcac 561  Q
    |||||||| |||||||||||    
T  8566052 attagcttaaacaagctcac 8566071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 13695680 - 13695816
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccacta-taatgagttc-ttacaaagagat 522  Q
    ||||||||||||||| | |||||| |||||||   ||||||||| ||||||||||| | ||||||| ||||||||| |||||||||| ||||||||||||    
T  13695680 acaccaagaaatgtttacctagtttggtccaagt-tgacctactatggaggagagaataatctctctaatccactattaatgagttctttacaaagagat 13695778  T
Q  523 acaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||   |||||||||||||||||| |||||||||||    
T  13695779 acaaaa-gggttacaagaaattagctttaacaagctcac 13695816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 30182756 - 30182643
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||||| ||||||||||||   |||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||   |||    
T  30182756 tgttcatccagttcggtccaaacttgacatactctggaggagagattgaactctccaatccactatcaatgagttcttccaaagagatagaaaa-gggtt 30182658  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  30182657 acaagaaattagctt 30182643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 33831824 - 33831723
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| | ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  33831824 tgacctaatatgggggagagattgatctcttcaatccactatcaatgagttcttacaaagagatacaaa-tgggttacaagaaattagcttaaacaagct 33831726  T
Q  559 cac 561  Q
    |||    
T  33831725 cac 33831723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 464 - 561
Target Start/End: Original strand, 42309963 - 42310060
Alignment:
Q  464 ctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||| ||| ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  42309963 ctactatgggggagagattgatctcgctaatccactatcaataagttcttacaaagagatacaaaag-agttacaagaaattagcttcaacaagctcac 42310060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 549
Target Start/End: Complemental strand, 32636982 - 32636879
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  32636982 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 32636885  T
Q  544 tagctt 549  Q
    ||||||    
T  32636884 tagctt 32636879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 443 - 555
Target Start/End: Original strand, 42426243 - 42426354
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    ||||||| |||||||  ||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||||    
T  42426243 ctagttcagtccaact-tgacctaatcagggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttgcaagaa 42426340  T
Q  542 attagcttcaacaa 555  Q
    ||||||||||||||    
T  42426341 attagcttcaacaa 42426354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 18441648 - 18441759
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  |||    
T  18441648 tgttcacccagttcggtccaaacttgacctactctagaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gagt 18441746  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  18441747 tacaagaaattag 18441759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 30682932 - 30683049
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag--ttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||   ||||||||||    
T  30682932 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaa-gggttacaagaa 30683029  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||||||| ||||    
T  30683030 attagcttcaacaagttcac 30683049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 474 - 561
Target Start/End: Original strand, 39468587 - 39468674
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||    
T  39468587 ggagagattgatctctctaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagttcac 39468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 250 - 555
Target Start/End: Original strand, 10054633 - 10054935
Alignment:
Q  250 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaa-tctagatctagtc 348  Q
    |||| |||||||||||||||||| || |  |||||||||||| |||| ||||| ||||     || |||||| |||| | |||||| |||||||||| ||    
T  10054633 ctcatatcaatgaaatttagatttgtaggacaagtatcaatgacaactaataatcaaa-----ataaccacatgcaacatcaacaaatctagatctaatc 10054727  T
Q  349 tagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaat-gttcatctagt 447  Q
    ||| || |||||| | || ||||  |||||| || ||||  |||||||||||       ||| ||||||   |||||||||||  | | ||| | |||||    
T  10054728 tagcaaccaagtgtaaagcaaaattacaatcgaagcaaaaaataaacaagataaaaagagtacagaaaatggaacaacaccaaagagtcgtttacctagt 10054827  T
Q  448 tcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaatta 545  Q
    | ||||||||||| ||| ||| ||| ||||| |||||| |||||||| |||||| ||||||||| ||||||||||||||||||   |||| |||||||||    
T  10054828 ttggtccaacaattacccactttgggggagatattgatatctccaatacactatcaatgagttcattacaaagagatacaaaa--ggttataagaaatta 10054925  T
Q  546 gcttcaacaa 555  Q
    ||||||||||    
T  10054926 gcttcaacaa 10054935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 555
Target Start/End: Original strand, 28750667 - 28750774
Alignment:
Q  447 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatta 545  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  |||||| |||||||    
T  28750667 ttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaaagatac-aaatgggttacaggaaatta 28750764  T
Q  546 gcttcaacaa 555  Q
     |||||||||    
T  28750765 acttcaacaa 28750774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 385
Target Start/End: Complemental strand, 40763308 - 40763200
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaacc 373  Q
    |||||||||||||||||| |||||||||| ||||||||||   ||| |||||||||||||||| |||| ||| |||| ||| ||||||||||| ||||||    
T  40763308 gtggagcaagtatcaatgacaaccaataatcaaatgtaaa---ccataagcaataacaacaatatagacctaatctataaaccaagtgcatagcaaaacc 40763212  T
Q  374 acaatctaacca 385  Q
    | ||| ||||||    
T  40763211 ataatttaacca 40763200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 474 - 561
Target Start/End: Complemental strand, 38747135 - 38747048
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||| |||| |||||||| || |||||||||||||| |  ||||||||||||||||||||||||||||||    
T  38747135 ggagagattgatctctccaatcctctatcaatgagtttttccaaagagatacaaa-tgggttacaagaaattagcttcaacaagctcac 38747048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 10593426 - 10593312
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttac-aaagagatacaaaattag 532  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||| |||| |||||||||   |    
T  10593426 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaaaa--gg 10593329  T
Q  533 ttacaagaaattagctt 549  Q
    |||||||||||||||||    
T  10593328 ttacaagaaattagctt 10593312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 26170930 - 26170848
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  26170930 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaa 26170848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 3075648 - 3075783
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||||||| | | || ||||||||  ||||||||| ||  ||||||||||||||||||||| |||||| || || |||||||||| |||||    
T  3075648 acaccaagaaatgttcacccaatttggtccaact-tgacctactatgagggagagattgatctctccaattcactatcaacgaattcttacaaaaagata 3075746  T
Q  524 caaaattagttacaagaaattagcttcaacaagctcac 561  Q
    | ||||  ||||||||||||||| |||| |||||||||    
T  3075747 c-aaatgggttacaagaaattagattcagcaagctcac 3075783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 448 - 559
Target Start/End: Original strand, 33906042 - 33906154
Alignment:
Q  448 tcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaatta 545  Q
    ||||||||||| ||||||||||| | | |||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||  | ||||||||| |||    
T  33906042 tcggtccaacattgacctactctagggaagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaagga-ttacaagaagtta 33906140  T
Q  546 gcttcaacaagctc 559  Q
    ||||| ||||||||    
T  33906141 gcttcgacaagctc 33906154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 31183129 - 31183015
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||  | ||||||||||||    
T  31183129 agttcggtccaact-tgacctaatatgggggagagatagatctctccaatccagtatcaatgagttcttacaaagggatacaaa--tggttacaagaaat 31183033  T
Q  544 tagcttcaacaagctcac 561  Q
    || ||| ||||| |||||    
T  31183032 taacttaaacaaactcac 31183015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 29722692 - 29722582
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29722692 tgttcacccagttcggtccaaatttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29722595  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  29722594 tacaagaaattag 29722582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 29751160 - 29751270
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29751160 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29751257  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  29751258 tacaagaaattag 29751270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 22536290 - 22536403
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||| |||||||||||| || |||||||||| |||| |||||||||   ||    
T  22536290 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactccccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 22536387  T
Q  534 tacaagaaattagctt 549  Q
    ||||||||||||||||    
T  22536388 tacaagaaattagctt 22536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 529
Target Start/End: Complemental strand, 30793314 - 30793210
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagat 522  Q
    ||||||||||||||| | || |||||||||||||||||| |||||| | |||||||  |||||||||| | |||||| ||| ||||| ||||||||||||    
T  30793314 acaccaagaaatgtttaccttgttcggtccaacaatgacttactctaggggagaga--gatctctccacttcactatcaattagttctttacaaagagat 30793217  T
Q  523 acaaaat 529  Q
    |||||||    
T  30793216 acaaaat 30793210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 455 - 559
Target Start/End: Complemental strand, 3326063 - 3325958
Alignment:
Q  455 aacaatgacctactctggaggagagattgatctctccaatccactataat-gagttctt-acaaagagatacaaaattagttacaagaaattagcttcaa 552  Q
    |||||||||||||| ||   |||| ||||||||||| ||||||| || || |||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  3326063 aacaatgacctactatgtgagagatattgatctctctaatccaccatcattgagttctttacaaagagatacacaatg-gttacaagaaattagcttcaa 3325965  T
Q  553 caagctc 559  Q
    |||||||    
T  3325964 caagctc 3325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 560
Target Start/End: Complemental strand, 42926968 - 42926911
Alignment:
Q  502 aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctca 560  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  42926968 aatgagttcttacaaagagatacaaa-tgagttacaagaaattagcttcaacaatctca 42926911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 29720532 - 29720422
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||| ||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  29720532 tgttcacccagttcggtccaaacttgacctactctagaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 29720435  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  29720434 tacaagaaattag 29720422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 25078289 - 25078211
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25078289 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 25136258 - 25136180
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  25136258 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 25136180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 40380259 - 40380181
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  40380259 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgaactctccaatccactatcaaatgagttctt 40380181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 40382470 - 40382392
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  40382470 tgttcacccagttcggtccaaacttgacctactctggaggagagtttgaactctccaatccactatcaaatgagttctt 40382392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 527
Target Start/End: Complemental strand, 42927069 - 42926967
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagata 523  Q
    ||||||||||||||| | | |||||||||||||  ||||||||| ||   |||||||| || ||| ||||||||| | ||||||||||||||||||||||    
T  42927069 acaccaagaaatgtttacccagttcggtccaact-tgacctactatgagagagagatttatttcttcaatccactgtcaatgagttcttacaaagagata 42926971  T
Q  524 caaa 527  Q
    ||||    
T  42926970 caaa 42926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 213333 - 213288
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  213333 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 213288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 27015396 - 27015351
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  27015396 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 27015351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 28278180 - 28278135
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  28278180 ctcacccaagttgctcacaatagtctctccactcatgtgtttccca 28278135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 40147125 - 40147080
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  40147125 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 40147080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 19806521 - 19806466
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat 501  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||    
T  19806521 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactat 19806466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 559
Target Start/End: Original strand, 10700581 - 10700771
Alignment:
Q  368 aaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaa-gaaatgttcatctagttcggtccaacaatgaccta 466  Q
    |||||||||||| || ||||| |||| ||||||       |||||||||||| |||||||| || ||| | || |   ||||||||  ||||||||||||    
T  10700581 aaaaccacaatcaaatcaaagaataagcaagataaagagcgtagagaaaagagaacaacacgaaagaattatttactcagttcggtgaaacaatgaccta 10700680  T
Q  467 ctctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    || ||| |||||||  |||||||||| | |||||| ||||||||| ||  |||||||||||||| | |||| ||| |||||||||||||||||||    
T  10700681 ctatgggggagaga--gatctctccacttcactatcaatgagttctttttaaagagatacaaaaat-gttataag-aattagcttcaacaagctc 10700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 16544568 - 16544499
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  16544568 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 16544499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 16546790 - 16546721
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  16546790 agttcggtccaaacttgacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 16546721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 4160945 - 4160885
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacca 305  Q
    |||| |||||||||||  ||||||||||  ||| ||||||||||||| |||||||||||||    
T  4160945 caaatctcacatcaatataatttagatttatggggcaagtatcaatgacaaccaataacca 4160885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 8446039 - 8445995
Alignment:
Q  252 cacatcaatgaaatttagattcgtggagcaagtatcaatggcaac 296  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||    
T  8446039 cacatcaatgaaatttagatttgtgggacaagtatcaatggcaac 8445995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 30793469 - 30793418
Alignment:
Q  253 acatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataacc 304  Q
    |||||||| | |||||||||||||| ||||| |||||||||| |||||||||    
T  30793469 acatcaataatatttagattcgtggggcaagcatcaatggcacccaataacc 30793418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 557
Target Start/End: Original strand, 14689503 - 14689548
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagc 557  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||    
T  14689503 ttacaaagagatacaaaaata-ttacaaaaaattagcttcaacaagc 14689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 33905837 - 33905895
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataac 303  Q
    |||| |||||| |||| ||||||||||| ||| | |||||||||||| |||||||||||    
T  33905837 caaatctcacaccaattaaatttagatttgtgaaacaagtatcaatgacaaccaataac 33905895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 38746869 - 38746824
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| |||  ||||||||||||| ||||||||||    
T  38746869 ctcacccaagttgctcgcaaatgactctccactcacgtgtttccca 38746824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 1e-95; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 222 - 598
Target Start/End: Complemental strand, 7451500 - 7451123
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||   ||| ||| ||||||    
T  7451500 tgttgtgaattcggactcaaatccaaatctcacatcaatgaaatttagattcgtggagcaagtttcaatgacaaccaataacctcttgtcaataaccaca 7451401  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat--nnnnnnngtagagaaaaga 419  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||||||||||         |||||||||| |    
T  7451400 agcaataacaacaatctagatctaatctagaaaacaagtgcataacaaaaccacaatcgaaccaaagaataaacaagataaagagagagtagagaaaa-a 7451302  T
Q  420 ta-acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa 517  Q
    || |||||||||| ||||||||| | ||||| |||||||  ||||||||| | |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  7451301 tagacaacaccaataaatgttcacccagttc-gtccaac-ttgacctactgtagaggagagattgatctctgcaatccactatcaatgagttattacaaa 7451204  T
Q  518 gagatacaaaattagttacaagaaattagcttcaacaag-ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    ||||||| |||| | |||||||||||||||||||||||| || || |||||||||| |||  ||||||||||||||||||||    
T  7451203 gagatac-aaatgaattacaagaaattagcttcaacaagtcttactcaagttgctcacaaatgactctccactcatgtgttt 7451123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 265 - 561
Target Start/End: Original strand, 42287940 - 42288235
Alignment:
Q  265 tttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcat 364  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42287940 tttagattcgtgaagcaaatatcaatggcaaccaataaccaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaagtgcat 42288039  T
Q  365 agaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaa-tgttcatctagttcggtccaacaatgac 463  Q
    ||||||||||||||| |||||| | ||||||||| |       ||| ||||||||||||| |||||||||| | || | | |||||||||||||  ||||    
T  42288040 agaaaaaccacaatccaaccaaggaataaacaagttaaagagggtaaagaaaagataacagcaccaagaaattattgacccagttcggtccaac-ttgac 42288138  T
Q  464 ctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||| ||||| |||||||||||||||||||||||| ||| |||||| ||||||||||| |||| ||||  ||||||| ||||||||||||||||||||||    
T  42288139 ctaatctgg-ggagagattgatctctccaatccattatcaatgagctcttacaaagaaatac-aaatgggttacaataaattagcttcaacaagctcac 42288235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 221 - 510
Target Start/End: Complemental strand, 17450957 - 17450671
Alignment:
Q  221 atgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattacca 319  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||   ||    
T  17450957 atgttgtgaattcggtctcaaattctaaacctcacaccaatgaaatttagattcgtgacgcaagtatcaatgacaaccgataaccaaatgtaaat---ca 17450861  T
Q  320 caagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaaga 419  Q
    ||||||| |||||||||||| | ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||       ||| ||||||||    
T  17450860 caagcaacaacaacaatctaaacctaatctagaaaccaagtgcatagcaaaaccacaatctaaccaaaggataaacaagataaagagagtacagaaaaga 17450761  T
Q  420 taacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc 510  Q
    ||||||||||||  | |||||| |||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  17450760 taacaacaccaaagattgttcacctagttcggtccaac-ttgacctactct-gtggagagattgatctctccaatccactatcaatgagttc 17450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 45727257 - 45726972
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaac 372  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||| ||| |||| |||||||| |||  |||||||||| |||||    
T  45727257 gtggagcaagtatcaatggcaactaataaccaaatgtaaataaaccacaagcaacaacaataatatagacctagtctataaactaagtgcatagcaaaac 45727158  T
Q  373 cacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctgg 472  Q
    ||||||| |||||||| |||||  ||||       ||| ||||||||||||||||| || ||||||||| | |||||||||||||  |||||||||||||    
T  45727157 cacaatccaaccaaagaataaa--agataaagagagtaaagaaaagataacaacactaaaaaatgttcacccagttcggtccaact-tgacctactctgg 45727061  T
Q  473 aggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  45727060 aggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaataggttacaagaaattagcttcaacaagctcac 45726972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 222 - 561
Target Start/End: Complemental strand, 33648548 - 33648214
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    |||||||||||||| |  |||| |||| |||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||     || || ||     
T  33648548 tgttgtgaattcggtca-aaatccaaatctcatatcaatgaaatttagattcgtggagtaagaatcaatgacaaccaataacaaaa-----ataactacg 33648455  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagata 421  Q
    ||||| |||||||||||||  ||| |||| ||  ||||||||||| |||| ||||||  ||| |||| |||||||||||       |||||||||||| |    
T  33648454 agcaacaacaacaatctaggcctaatctataagccaagtgcatagcaaaatcacaattaaactaaagaataaacaagataaagagagtagagaaaagaca 33648355  T
Q  422 acaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaaga 519  Q
    |||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  33648354 acaacaccaataaatgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaaga 33648255  T
Q  520 gatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
     ||||||||   |||||| |||||||||||||||||||||||    
T  33648254 aatacaaaa-gggttacaggaaattagcttcaacaagctcac 33648214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 35446726 - 35447009
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca--atctagatctagtctagaaaacaagtgcatagaaaaa 371  Q
    |||||||||||||||||  ||||||| ||||||| ||||   ||||||  ||| |||||||  || |||||||||||||  || ||||||||||| ||||    
T  35446726 gtggagcaagtatcaatcccaaccaacaaccaaa-gtaa---accacactcaacaacaacaatatatagatctagtcta-taatcaagtgcatagcaaaa 35446820  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    |||||||  |||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||||    
T  35446821 ccacaattcaaccaaagcataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttgacctactctg 35446919  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||| ||||    
T  35446920 gaggagagagtgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagattcaacaagatcac 35447009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 274 - 561
Target Start/End: Original strand, 1631571 - 1631857
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaatta-ccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaa 370  Q
    |||||| ||||||||||| ||||||| |||||||| ||||| | |||||||||||||||||||| ||  ||  |||||| | || |||||| |||| |||    
T  1631571 gtggagtaagtatcaatgacaaccaacaaccaaatataaataaaccacaagcaataacaacaatatatagacttagtct-gtaatcaagtgtatagcaaa 1631669  T
Q  371 accacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactct 470  Q
    ||||||||| ||  || | |||||||||||       | |  |||||||||||||||| ||||||| ||||   |||||||||||||  |||||||||||    
T  1631670 accacaatccaa--aaggaataaacaagataaagagagcaaggaaaagataacaacactaagaaatattcactcagttcggtccaact-tgacctactct 1631766  T
Q  471 ggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  1631767 ggaggagagattgatttctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagatattagcttcaacaagctcac 1631857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 333 - 561
Target Start/End: Complemental strand, 24398332 - 24398100
Alignment:
Q  333 caatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaa---gataacaacacc 429  Q
    ||||||| ||||| ||||||||  |||||||||| |||||| |||||  ||||| |  ||||||||||       ||||||||||   ||||||||||||    
T  24398332 caatctaaatctaatctagaaactaagtgcatagcaaaaccgcaatcggaccaa-gactaaacaagataaagagagtagagaaaaatagataacaacacc 24398234  T
Q  430 aagaaat-gttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 526  Q
    ||| ||| ||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  24398233 aagtaattgttcagccagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaa 24398134  T
Q  527 aattagttacaagaaattagcttcaacaagctcac 561  Q
    ||   ||||||||||||||||||||||||||||||    
T  24398133 aa-gggttacaagaaattagcttcaacaagctcac 24398100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 2334427 - 2334543
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||    
T  2334427 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagttactagaaat 2334525  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  2334526 tagcttcaacaagttcac 2334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 36988076 - 36988201
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  36988076 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gagtt 36988174  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    |||||||||||| ||  ||||||||||    
T  36988175 acaagaaattagttttgacaagctcac 36988201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 430 - 561
Target Start/End: Original strand, 17490143 - 17490273
Alignment:
Q  430 aagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaa 528  Q
    |||||||||| | | |||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  17490143 aagaaatgtttacccagttcggtccaa-attgacctactctaggggagagattgatctctacaatccactatcaatgagttcttacaaagagttacaaaa 17490241  T
Q  529 ttagttacaagaaattagcttcaacaagctcac 561  Q
      |||||||||||||||||||||||||||||||    
T  17490242 g-agttacaagaaattagcttcaacaagctcac 17490273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 17057379 - 17057491
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  17057379 agttcggtccaact-tgacctagtctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaaaaaat 17057476  T
Q  544 tagcttcaacaagct 558  Q
    |||||||||||||||    
T  17057477 tagcttcaacaagct 17057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 17085362 - 17085474
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  17085362 agttcggtccaact-tgacctagtctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgagttacaaaaaat 17085459  T
Q  544 tagcttcaacaagct 558  Q
    |||||||||||||||    
T  17085460 tagcttcaacaagct 17085474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 6595015 - 6595131
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||   ||||||||||||    
T  6595015 agttcggtccaaacttgacctactctggaggagagattgatctctccaatccactatcaacgagttcttacaaagagattcaaaa-gggttacaagaaat 6595113  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  6595114 tagcttcaacaagttcac 6595131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 36773720 - 36773605
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||| || ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||    
T  36773720 agttcggtccaact-tgacataatctgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatacaaa-tgagttacaagaaat 36773623  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||||||||    
T  36773622 tagcttcaacaagctcac 36773605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 243 - 559
Target Start/End: Original strand, 30217858 - 30218168
Alignment:
Q  243 ttcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaat-ctaga 341  Q
    |||||| |||||||||||| |||||||||| |||||  || |||||| | |||||||||||||||     |  ||||||||||| || | || | |||||    
T  30217858 ttcaaatctcacatcaatggaatttagatttgtgga--aaatatcaacgacaaccaataaccaaa-----acaaccacaagcaacaaaatcatttctaga 30217950  T
Q  342 tctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttca 441  Q
    || | |||||||| |||||| | |  | |||||||||| |||||||| |||||||||||       |||||||||| | | | ||||||| ||||||| |    
T  30217951 tccaatctagaaaccaagtgtaaaacacaaccacaatcaaaccaaagaataaacaagataaagagagtagagaaaa-agagctacaccaaaaaatgttta 30218049  T
Q  442 tctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaattagttacaag 539  Q
     | ||||| ||||||||||||| |||||||| |||| ||||||||| | ||| ||||||| ||||| ||  |||||||||||||||||| | ||||||||    
T  30218050 ccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaa-tggttacaag 30218148  T
Q  540 aaattagcttcaacaagctc 559  Q
    ||||||||||||| ||||||    
T  30218149 aaattagcttcaataagctc 30218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 723754 - 723869
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||    
T  723754 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaat 723851  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  723852 tagcttaaacaagctcac 723869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 443 - 561
Target Start/End: Original strand, 33162458 - 33162575
Alignment:
Q  443 ctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||||||||  ||||||| ||| | ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |  ||||||||||    
T  33162458 ctagttcggtccaact-tgacctaatctaggggagagattgatctctctaatccactatcaatgagttcttacagagagatacaaa-tgggttacaagaa 33162555  T
Q  542 attagcttcaacaagctcac 561  Q
    ||||||||||||||||||||    
T  33162556 attagcttcaacaagctcac 33162575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 4503133 - 4503245
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  4503133 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 4503230  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  4503231 acaagaaattagctt 4503245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 5723256 - 5723369
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   | ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  5723256 tgttcacccagttcggtccaaacttaacctactctagaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-aggtt 5723354  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  5723355 acaagaaattagctt 5723369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 45099922 - 45099810
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||  ||||    
T  45099922 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttctt-caaagagatacaaaa-gagtt 45099825  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  45099824 acaagaaattagctt 45099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 558
Target Start/End: Original strand, 7815311 - 7815395
Alignment:
Q  474 ggagagattgatctctccaatccactataa-tgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  7815311 ggagagattaatctctccaatccactataaatgagttcttacaaagagatacaaaag-agttacaagaaattagcttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 36318019 - 36318134
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||    
T  36318019 agttcggtccaact-tgacctactctaagggagagattgatctctccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaataaat 36318116  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| ||||||||||||||    
T  36318117 tagtttcaacaagctcac 36318134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 42362496 - 42362395
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||  |||||||||||||||||| ||||||||    
T  42362496 tgacctaatctgggggagagatagatctctccaatccactatcaatgagttcttacaaagggatac-aaatgggttacaagaaattagcttaaacaagct 42362398  T
Q  559 cac 561  Q
    |||    
T  42362397 cac 42362395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 11067463 - 11067348
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  11067463 agttcggtccaact-tgacctaatctgggggagagattgatctcttcaatccattataaatgagttcttacaaagagatac-aaatgggttacaagaaat 11067366  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||  ||||||||||    
T  11067365 tagctttgacaagctcac 11067348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 445 - 561
Target Start/End: Complemental strand, 38312398 - 38312283
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  |||| || ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||  ||||||||||||    
T  38312398 agttcggtccaact-tgacataatctgggggagagattgatctctccaatccactatcaatgagatcttacaaagagatac-aaatgggttacaagaaat 38312301  T
Q  544 tagcttcaacaagctcac 561  Q
    ||| ||||||||| ||||    
T  38312300 tagtttcaacaagttcac 38312283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 561
Target Start/End: Complemental strand, 26353341 - 26353227
Alignment:
Q  446 gttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaatt 544  Q
    ||||||||||||  |||||||||||   ||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||| | |||||||||||||    
T  26353341 gttcggtccaact-tgacctactctaagggagagagtgatctctccaatccactatcaatgagtacttacaaaaagatacaaaagt-gttacaagaaatt 26353244  T
Q  545 agcttcaacaagctcac 561  Q
    ||||||||||| |||||    
T  26353243 agcttcaacaaactcac 26353227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 460 - 549
Target Start/End: Original strand, 4484354 - 4484444
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaattagctt 549  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||||||    
T  4484354 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gggttacaagaaattagctt 4484444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 14633835 - 14633951
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaa 542  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||| |||| ||||| ||||  |||||||||||    
T  14633835 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatctatgagttcttacaaaagggatac-aaatgggttacaagaaa 14633932  T
Q  543 ttagcttcaacaagctcac 561  Q
    ||||||| |||||||||||    
T  14633933 ttagcttaaacaagctcac 14633951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 34139780 - 34139896
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaa-gagatacaaaattagttacaagaaa 542  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||| | |  |||||||||||    
T  34139780 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagttcttacaaaagggatacata-tgggttacaagaaa 34139877  T
Q  543 ttagcttcaacaagctcac 561  Q
    ||||||| |||||||||||    
T  34139878 ttagcttaaacaagctcac 34139896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 11151601 - 11151716
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||  | |||||||||||||| ||||| ||||  ||||||||||||    
T  11151601 agttcggtccaact-tgacctaatctgggggagaggttgatctctccaatccactatctaagagttcttacaaagtgatac-aaatgggttacaagaaat 11151698  T
Q  544 tagcttcaacaagctcac 561  Q
    |||||| |||||||||||    
T  11151699 tagcttaaacaagctcac 11151716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 549
Target Start/End: Complemental strand, 29868027 - 29867924
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| | ||| |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||  ||||||||||||    
T  29868027 agttcggtccaact-tgacctaatttgggggagagattgatctctccaatccactatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 29867930  T
Q  544 tagctt 549  Q
    ||||||    
T  29867929 tagctt 29867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 28672088 - 28672036
Alignment:
Q  447 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28672088 ttcggtccaacaatgacctactctggaggagagattgatctctccaatccact 28672036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 32289732 - 32289621
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||||||||| |||  ||||| ||||||||||||| ||||||||||||||  |||    
T  32289732 tgttcacccagttcggtccaaacttgacctactctggaggagagattgatctctctaatttactatcaatgagttcttacaaaagagatacaaaa-gagt 32289634  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  32289633 tacaagaaattag 32289621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 30833490 - 30833404
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagttacaagaaatta 545  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||    
T  30833490 tgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-gggttacaagaaatta 30833404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 558
Target Start/End: Original strand, 42019859 - 42019995
Alignment:
Q  425 acaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgag---ttcttacaaagag 520  Q
    |||||||||| |||| ||| | || ||||||||||| ||||||| ||| | ||||||||||||||| ||| |||||| ||||||   || ||||||||||    
T  42019859 acaccaagaagtgtttatccaatttggtccaacaataacctactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagag 42019958  T
Q  521 atacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||||  |||||||||||||||||||| |||||||    
T  42019959 atacaaaa-gagttacaagaaattagcttctacaagct 42019995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 11049698 - 11049596
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagct 558  Q
    ||||||| | || ||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| |||   |||| ||||||||||||||||||||||    
T  11049698 tgacctattatgaaggagagattgatcttttcaatctactatcaatgagttcttacaaagagatactaaaagggttataagaaattagcttcaacaagct 11049599  T
Q  559 cac 561  Q
    |||    
T  11049598 cac 11049596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 436 - 549
Target Start/End: Original strand, 36205665 - 36205777
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||| ||||||| ||||||||||| || | ||||||||||| |||||||||||||||  ||||    
T  36205665 tgttcacccagttcggtccaaacttgacctactctggaggatagattgaactctccaatccgctgtcaatgagttctt-caaagagatacaaaa-gagtt 36205762  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  36205763 acaagaaattagctt 36205777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 561
Target Start/End: Complemental strand, 11690668 - 11690544
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||| ||| |||||||||||||  |||| || | ||| |||||| ||||||||||||||||||||| || || ||||||||||| |||||||| |  |||    
T  11690668 tgttgatccagttcggtccaact-tgacgtaatatgggggagaggttgatctctccaatccactatcaacgatttcttacaaagggatacaaa-tgggtt 11690571  T
Q  535 acaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||| |||||||||||    
T  11690570 acaagaaattagcttaaacaagctcac 11690544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 561
Target Start/End: Complemental strand, 13121901 - 13121812
Alignment:
Q  470 tggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||    |||||||||||||| |||||||||||||||    
T  13121901 tggaggagagattgatttcttcaatccactatcaatgagtttctacaaagagatacaaag---gttacaagaaattatcttcaacaagctcac 13121812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 6266859 - 6266749
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||| || |||||||||| |||| |||||||||   ||    
T  6266859 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaagagttcttacaaaagggatacaaaa--ggt 6266762  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  6266761 tacaagaaattag 6266749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 13656041 - 13656146
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttcttacaaa-gagatacaaaattagttacaagaa 541  Q
    ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||| | ||||||| |   ||||||||||    
T  13656041 agttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttcttacaaaagggatacaagag--gttacaagaa 13656138  T
Q  542 attagctt 549  Q
    ||||||||    
T  13656139 attagctt 13656146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 559
Target Start/End: Original strand, 42261310 - 42261609
Alignment:
Q  250 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtc 348  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||            |||| ||| ||||||| ||||| | ||||||||||| ||    
T  42261310 ctcacgtcaatgaaatttagatttgtggagcaagtatcaatggcaacca------------aaataaccgcaagcaacaacaatatatctagatctaatc 42261397  T
Q  349 tagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaaca-ccaagaaatgttcatctagt 447  Q
    ||| || |||||| |||| |||||||||| | |||||||  |||| ||||||       ||| |||||| | ||||||| | || || |||| | | |||    
T  42261398 tagcaaccaagtgtatagcaaaaccacaaacaaaccaaa--ataatcaagataaagagagtaaagaaaa-agaacaacatcaaataattgtttacccagt 42261494  T
Q  448 tcggtccaacaatgacctactctggag--gagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaat 543  Q
    || || ||||| | ||||||| ||| |  |||||| ||||||||||  | |||||| ||||||| | ||||||||| ||||||||  |||||||||||||    
T  42261495 tcagttcaacactaacctactatgggggagagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaa-gagttacaagaaat 42261593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 24398435 - 24398377
Alignment:
Q  245 caaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataac 303  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  24398435 caaaccgcacattaatgaaatttagattcgtagagcaagtatcaatgacaaccaataac 24398377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 12647386 - 12647464
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  12647386 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 12647464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 1632036 - 1632081
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  1632036 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 1632081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 35447188 - 35447233
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  35447188 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 35447233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 39284994 - 39284930
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt 509  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  39284994 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccactatcaatgagtt 39284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 42288414 - 42288459
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  42288414 ctcacccaagttgctcacaaaagactctccactcatgtgtttccca 42288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 444 - 556
Target Start/End: Original strand, 7597020 - 7597131
Alignment:
Q  444 tagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaa 541  Q
    |||||||||| ||||||||||||||||| ||||||||  |||||||||  || || || ||||||||| ||||||| ||||||||||  | |||||||||    
T  7597020 tagttcggtctaacaatgacctactctgaaggagaga--gatctctccgttctacaatcaatgagttctttacaaaaagatacaaaa-gacttacaagaa 7597116  T
Q  542 attagcttcaacaag 556  Q
    ||||| ||| |||||    
T  7597117 attagtttcgacaag 7597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 561
Target Start/End: Original strand, 14202450 - 14202530
Alignment:
Q  474 ggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||         || ||||||||||||||||||| |||||||||||    
T  14202450 ggagagattgatctctccaatctactatcaatgagttcttacaaag--------gatgagttacaagaaattagcttaaacaagctcac 14202530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 42412161 - 42412121
Alignment:
Q  460 tgacctactctggaggagagattgatctctccaatccactat 501  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  42412161 tgacctactctgg-ggagagattgatctctccaatccactat 42412121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 4561180 - 4561137
Alignment:
Q  511 ttacaaagagatacaaaattagttacaagaaattagcttcaacaa 555  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  4561180 ttacaaagagatacaaaaat-gttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 34811295 - 34811345
Alignment:
Q  508 ttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 559  Q
    |||||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  34811295 ttcttacaaagagatataaaag-agttacaataaattagcttcaacaagctc 34811345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 600
Target Start/End: Complemental strand, 45726793 - 45726750
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttcc 600  Q
    |||||||||||||||| |||  ||||||||||||||||||||||    
T  45726793 ctcacccaagttgctcacaaatgactctccactcatgtgtttcc 45726750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 278 - 561
Target Start/End: Original strand, 17845 - 18128
Alignment:
Q  278 agcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaa 377  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  17845 agcaagtatcaatagcaaccaataatcaaatgtaaataaccacaagcaataacaacaatctagatctaatctagaaaacaaatgcatagcaaaaccacaa 17944  T
Q  378 tctaaccaaagg-ataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggagga 476  Q
    |||||||||||| |||||||||||       ||| |||||||||||||||||||||||||||||| | |||||| |||||   |||||||| ||||||||    
T  17945 tctaaccaaaggaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcgatccaaacttgacctaccctggagga 18044  T
Q  477 gagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  18045 gagattgatctctccaatccactatcaatgagtt-ttacaaagagatac-aaatgagttacaagaaattagcttcaacaagctcac 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 160; Significance: 6e-85; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 222 - 547
Target Start/End: Complemental strand, 10869 - 10546
Alignment:
Q  222 tgttgtgaattcggactcaaattcaaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccaca 321  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||| | |||| ||||||    
T  10869 tgttgtgaattcgg--tcaatttcaaacctcacatcaatgaaatttagatttgtggagaaagtatcaatgacaaccgataaccaaaagaaaataaccaca 10772  T
Q  322 agcaataacaacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat-nnnnnnngtagagaaaagat 420  Q
    ||||| ||||||||||||||| || |||||||| |||||| |||| ||||| ||||||||| ||||| |||||||||||        |||||| ||||||    
T  10771 agcaacaacaacaatctagatttaatctagaaatcaagtgtatagtaaaactacaatctaatcaaagaataaacaagataaaagagagtagaggaaagat 10672  T
Q  421 aacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaaga 519  Q
    ||||||||||||||||||| | | |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  10671 aacaacaccaagaaatgtttacccagttcggtccaac-ttgacctactctggaggagagattgatctcttcaatccactatcaacgagttcttacaaaga 10573  T
Q  520 gatacaaaattagttacaagaaattagc 547  Q
    ||||||||| | ||||||| ||||||||    
T  10572 gatacaaaa-tggttacaataaattagc 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 137; Significance: 3e-71; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 274 - 561
Target Start/End: Complemental strand, 7654 - 7370
Alignment:
Q  274 gtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaacaatcta--gatctagtctagaaaacaagtgcatagaaaaa 371  Q
    |||||||||||||||||||||||||| ||||||| |||||   |||||||||| ||||| ||| ||  || |||||||| ||| ||||||||||| ||||    
T  7654 gtggagcaagtatcaatggcaaccaacaaccaaa-gtaaa---ccacaagcaacaacaataatatatagacctagtctataaaccaagtgcatagcaaaa 7559  T
Q  372 ccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaacaccaagaaatgttcatctagttcggtccaacaatgacctactctg 471  Q
    |||||||  ||||||||||||||||||||       ||| |||||||||||||||||||||||||||||| | |||||||||||||  | |||||||||     
T  7558 ccacaattcaaccaaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaac-ttaacctactcta 7460  T
Q  472 gaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  7459 gaggagagattgatctttccaatccactatcaatgagttcttacaaagagatac-aaatgggttacaagaaattagcttcaacaagctcac 7370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 7192 - 7151
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgttt 598  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  7192 ctcacccaagttgctcacaaaagactctccactcatgtgttt 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 3377 - 3482
Alignment:
Q  222 tgttgtgaattcggactcaaattc-aaacctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccac 320  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  3377 tgttgtgaattcggtctcaaattccaaacctcacatcaatgaaatttagattcatggagcaagtatcaatggcaaccaataactaaatgtaaataaccac 3476  T
Q  321 aagcaa 326  Q
    ||||||    
T  3477 aagcaa 3482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 433 - 559
Target Start/End: Original strand, 27439 - 27566
Alignment:
Q  433 aaatgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagtt-cttacaaagagatacaaaatt 530  Q
    ||||||| | ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||  |||||||||||||| ||||     
T  27439 aaatgtttacctaattcggtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatac-aaatg 27537  T
Q  531 agttacaagaaattagcttcaacaagctc 559  Q
    |||||||||||||||||||||||||||||    
T  27538 agttacaagaaattagcttcaacaagctc 27566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 11725 - 11612
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  11725 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatac-aaatgagtt 11627  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  11626 acaagaaattagctt 11612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 11422 - 11377
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  11422 ctcacccaagttgctcagaaatgactctccactcatgtgtttccca 11377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 114770 - 114657
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||||| ||||||||| ||   | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  114770 tgttcatccagttcggtctaaacttaacctactctggaggagagattgatctctccaatccactatcaatgagttcttacaaagagatacaaaa-gcgtt 114672  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  114671 acaagaaattagctt 114657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 434701 - 434588
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||   |||    
T  434701 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttcttacaaagagatacaaaa-gggtt 434603  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  434602 acaagaaattagctt 434588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 559
Target Start/End: Original strand, 490145 - 490444
Alignment:
Q  250 ctcacatcaatgaaatttagattcgtggagcaagtatcaatggcaaccaataaccaaatgtaaattaccacaagcaataacaaca-atctagatctagtc 348  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||            |||| ||| ||||||| ||||| | ||||||||||| ||    
T  490145 ctcacgtcaatgaaatttagatttgtggagcaagtatcaatggcaacca------------aaataaccgcaagcaacaacaatatatctagatctaatc 490232  T
Q  349 tagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagatnnnnnnngtagagaaaagataacaaca-ccaagaaatgttcatctagt 447  Q
    ||| || |||||| |||| |||||||||| | |||||||  |||| ||||||       ||| |||||| | ||||||| | || || |||| | | |||    
T  490233 tagcaaccaagtgtatagcaaaaccacaaacaaaccaaa--ataatcaagataaagagagtaaagaaaa-agaacaacatcaaataattgtttacccagt 490329  T
Q  448 tcggtccaacaatgacctactctggag--gagagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaattagttacaagaaat 543  Q
    || || ||||| | ||||||| ||| |  |||||| ||||||||||  | |||||| ||||||| | ||||||||| ||||||||  |||||||||||||    
T  490330 tcagttcaacactaacctactatgggggagagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaa-gagttacaagaaat 490428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 445 - 558
Target Start/End: Original strand, 149107 - 149219
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  || |||||||||    
T  149107 agttcggtccaact-taacctactctgggggagagattgatctctccaatccactatcaatgagttcttacaaagagata-taaatgggtaacaagaaat 149204  T
Q  544 tagcttcaacaagct 558  Q
    |||||||||||||||    
T  149205 tagcttcaacaagct 149219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 20425 - 20540
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagttacaagaaat 543  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||  ||||||||||||    
T  20425 agttcggtccaact-tgacctaatctgggggagagattgatctctccaatccaatatcaaagagttcttacaaagagatac-aaatgggttacaagaaat 20522  T
Q  544 tagcttcaacaagctcac 561  Q
    ||||||||||||| ||||    
T  20523 tagcttcaacaagttcac 20540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 436 - 549
Target Start/End: Complemental strand, 1083 - 971
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttacaaagagatacaaaattagtt 534  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| |||||||| || |||||||||||||||   |||    
T  1083 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaatgagttgtt-caaagagatacaaaa-gggtt 986  T
Q  535 acaagaaattagctt 549  Q
    |||||||||||||||    
T  985 acaagaaattagctt 971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 8735 - 8846
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||   ||    
T  8735 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaa-gggt 8833  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  8834 tacaagaaattag 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 11161 - 11272
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttcttac-aaagagatacaaaattagt 533  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||   ||    
T  11161 tgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaa-gggt 11259  T
Q  534 tacaagaaattag 546  Q
    |||||||||||||    
T  11260 tacaagaaattag 11272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 3735 - 3804
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  3735 agttcggtccaaacttgacctactctggaggagagattgaactctccaatccactatcaaatgagttctt 3804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 2604 - 2682
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    |||||| | ||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||  |||||||||||    
T  2604 tgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatccactatcaaatgagttctt 2682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 4853 - 4931
Alignment:
Q  59 ggatggttcagattacagattcactaatttagtttccatccatctcagctatggatttaaatcggatggactagattgg 137  Q
    |||||||||||||||||||| ||||||||  |||| || |||||||| | || |||||||||| ||  |||||||||||    
T  4853 ggatggttcagattacagatacactaattcggttttcaaccatctcaaccatagatttaaatcagacagactagattgg 4931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 4929 - 5002
Alignment:
Q  150 tgggaatccatttccatatcaactccatgcaaacaactaaaatatggact--aagaattatcccacatcatgta 221  Q
    ||||||||||||||||||||||||||||| |||  ||||| | || | ||  ||||||||||||||||||||||    
T  4929 tgggaatccatttccatatcaactccatgaaaaacactaataaataggctaaaagaattatcccacatcatgta 5002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 80351 - 80408
Alignment:
Q  503 atgagttcttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 561  Q
    ||||||||||||||| ||||||||| |  ||| ||||||||||||||||||||||||||    
T  80351 atgagttcttacaaaaagatacaaa-tgggttgcaagaaattagcttcaacaagctcac 80408  T

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Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 80587 - 80632
Alignment:
Q  557 ctcacccaagttgctctcaatagactctccactcatgtgtttccca 602  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||    
T  80587 ctcacccaagttgctcacaaaagactctccgctcatgtgtttccca 80632  T

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Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 331 - 400
Target Start/End: Original strand, 1291 - 1360
Alignment:
Q  331 aacaatctagatctagtctagaaaacaagtgcatagaaaaaccacaatctaaccaaaggataaacaagat 400  Q
    ||||||||||||||| |||||||| |||||| | || |||||||||||| |||||||  ||||| |||||    
T  1291 aacaatctagatctaatctagaaaccaagtgtaaagtaaaaccacaatcaaaccaaaaaataaataagat 1360  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 6432 - 6363
Alignment:
Q  445 agttcggtccaacaatgacctactctggaggagagattgatctctccaatccactat--aatgagttctt 512  Q
    ||||||||||||   | |||||||||||||||||| |||  ||||||||||||||||  |||||||||||    
T  6432 agttcggtccaaacttaacctactctggaggagagtttgtactctccaatccactatcaaatgagttctt 6363  T

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Target: scaffold0477 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 6981 - 7025
Alignment:
Q  436 tgttcatctagttcggtccaacaatgacctactctggaggagaga 480  Q
    |||| ||| |||||||||||| ||||||||||||| |||||||||    
T  6981 tgtttatccagttcggtccaataatgacctactctagaggagaga 7025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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