View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11639_low_3 (Length: 582)

Name: NF11639_low_3
Description: NF11639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11639_low_3
NF11639_low_3
[»] chr5 (14 HSPs)
chr5 (18-582)||(325836-326400)
chr5 (520-581)||(19825868-19825929)
chr5 (438-514)||(325432-325508)
chr5 (514-582)||(19525348-19525416)
chr5 (518-582)||(26403299-26403363)
chr5 (521-582)||(18677971-18678032)
chr5 (521-582)||(19523978-19524039)
chr5 (514-578)||(1273404-1273468)
chr5 (518-582)||(1663179-1663243)
chr5 (519-582)||(12936162-12936225)
chr5 (519-582)||(41905168-41905231)
chr5 (544-582)||(40058036-40058074)
chr5 (517-582)||(5384406-5384471)
chr5 (519-580)||(32411957-32412018)
[»] chr7 (16 HSPs)
chr7 (18-187)||(10200308-10200476)
chr7 (519-582)||(46457063-46457126)
chr7 (519-582)||(46674994-46675057)
chr7 (422-516)||(10200091-10200184)
chr7 (524-582)||(25154996-25155054)
chr7 (514-582)||(22061855-22061923)
chr7 (519-582)||(33458303-33458366)
chr7 (520-582)||(43006379-43006441)
chr7 (521-582)||(14107827-14107888)
chr7 (521-582)||(14417784-14417845)
chr7 (520-580)||(28648284-28648344)
chr7 (523-582)||(19279672-19279731)
chr7 (463-513)||(40320410-40320460)
chr7 (521-582)||(40926579-40926640)
chr7 (521-582)||(46458773-46458834)
chr7 (522-582)||(4858404-4858464)
[»] scaffold0268 (2 HSPs)
scaffold0268 (18-188)||(20445-20614)
scaffold0268 (422-494)||(20738-20810)
[»] scaffold1052 (1 HSPs)
scaffold1052 (379-481)||(360-462)
[»] chr3 (13 HSPs)
chr3 (379-477)||(32355898-32355997)
chr3 (519-582)||(41386123-41386186)
chr3 (519-582)||(41387493-41387556)
chr3 (521-582)||(17350162-17350223)
chr3 (521-582)||(42632701-42632762)
chr3 (518-582)||(8372676-8372740)
chr3 (132-196)||(32356131-32356194)
chr3 (25-60)||(32356279-32356314)
chr3 (519-582)||(42633946-42634009)
chr3 (521-582)||(49122062-49122123)
chr3 (521-582)||(54654026-54654087)
chr3 (463-515)||(19690646-19690698)
chr3 (276-308)||(32356068-32356100)
[»] chr8 (17 HSPs)
chr8 (463-578)||(35943839-35943959)
chr8 (520-582)||(19914966-19915028)
chr8 (519-582)||(10053804-10053867)
chr8 (520-582)||(31623900-31623962)
chr8 (522-582)||(36940093-36940153)
chr8 (539-582)||(24069506-24069549)
chr8 (519-582)||(37472396-37472459)
chr8 (524-582)||(4807364-4807422)
chr8 (540-578)||(27750685-27750723)
chr8 (520-582)||(29739703-29739765)
chr8 (520-582)||(41866888-41866950)
chr8 (541-582)||(7486092-7486133)
chr8 (521-582)||(37474096-37474157)
chr8 (521-582)||(38591067-38591128)
chr8 (444-485)||(40449497-40449538)
chr8 (445-481)||(33801529-33801565)
chr8 (522-582)||(37276303-37276363)
[»] chr6 (4 HSPs)
chr6 (520-582)||(31740332-31740394)
chr6 (518-582)||(31738355-31738419)
chr6 (518-582)||(5311271-5311335)
chr6 (522-582)||(33802077-33802137)
[»] chr2 (15 HSPs)
chr2 (379-477)||(6182126-6182224)
chr2 (521-582)||(37867751-37867812)
chr2 (422-496)||(44094776-44094850)
chr2 (521-582)||(2581798-2581859)
chr2 (132-196)||(6182358-6182421)
chr2 (448-512)||(36390956-36391020)
chr2 (519-582)||(2583606-2583669)
chr2 (276-319)||(6182284-6182327)
chr2 (25-60)||(6182506-6182541)
chr2 (519-582)||(7036959-7037022)
chr2 (519-582)||(37869100-37869163)
chr2 (520-582)||(7038392-7038454)
chr2 (445-485)||(4975722-4975762)
chr2 (463-511)||(10670942-10670990)
chr2 (448-512)||(34617652-34617716)
[»] chr4 (10 HSPs)
chr4 (517-582)||(37560359-37560424)
chr4 (520-582)||(44128394-44128456)
chr4 (521-582)||(29686251-29686312)
chr4 (518-582)||(46796086-46796150)
chr4 (397-496)||(231983-232082)
chr4 (519-582)||(39590934-39590997)
chr4 (520-582)||(33377424-33377486)
chr4 (520-582)||(37558992-37559054)
chr4 (463-512)||(41261121-41261170)
chr4 (448-512)||(34155611-34155675)
[»] chr1 (9 HSPs)
chr1 (521-582)||(49141556-49141617)
chr1 (518-582)||(25787224-25787288)
chr1 (523-582)||(13929292-13929351)
chr1 (520-582)||(25785962-25786024)
chr1 (276-319)||(5101017-5101060)
chr1 (25-60)||(5101241-5101276)
chr1 (539-582)||(9633788-9633831)
chr1 (132-193)||(5101094-5101154)
chr1 (518-582)||(14071263-14071327)
[»] scaffold0013 (1 HSPs)
scaffold0013 (520-579)||(96878-96937)
[»] scaffold0046 (2 HSPs)
scaffold0046 (517-582)||(23397-23462)
scaffold0046 (518-574)||(24883-24939)


Alignment Details
Target: chr5 (Bit Score: 493; Significance: 0; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 18 - 582
Target Start/End: Original strand, 325836 - 326400
Alignment:
Q  18 aatggaattgtgtgtcctatttgttaattttatcatagtttctctgtaaaattgaattaaattaaaattatgttttgcaaaactcgaattgcaactcagc 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  325836 aatgaaattgtgtgtcctatttgttaattttatcatagtttctctgtaaaattgaattaaattaaaattatgttttgcaaaactcgaattgcaactcagc 325935  T
Q  118 tcaaagtatatccattaatgatttctataatccaattttgtttgagatagcaaaggaaggggatgaaattgaaaaatcacaattaatactttcatgattt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  325936 tcaaagtatatccattaatgatttctataatccaattttgtttgagttagtaaaggaaggggatgaaattgaaaaatcacaattagtactttcctgattt 326035  T
Q  218 tcttaaccaagagattattgggtattaagtagcaatgacatgaaccatgaagatgtataatactttcagccaagtggaaaaatagattgttgtagtgtag 317  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  326036 tcttaaccaagagattattgggtcttaagtagcaatgacatgaaccatgaagatgtataatactttcagccaggtggaaaaatagattgttgtagtgtag 326135  T
Q  318 agcttatagtttgttggatagtgatttctgggaaaaacccgcacaaaaagatgaggataacgtggtagaagaaagtgggaaaaaatgtaatgtgaaaaga 417  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  326136 agcttatagtttgttggatagtgatttatgggaaaaagccgcacaaaaagatgaggataacatggtagaagaaagtgggaaaaaatgtagtgtgacaaga 326235  T
Q  418 ccaggataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgggaaacaacattcctttcccgggctaaacctcaccttaaat 517  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  326236 ccatgataagatcaatgttcatcttaaatttaatggtcaaaacttacttttccatggtggaaaacaacattcctttcccgggctaaacctcaccttaaat 326335  T
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  326336 taaggcttaatacattgttctgtcctttaacttatttttggttttcaatttgatccctcaactat 326400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 520 - 581
Target Start/End: Original strand, 19825868 - 19825929
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaacta 581  Q
    |||||||||||||| ||  |||| |||||||| |||||||||||||||||||||| ||||||    
T  19825868 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaacta 19825929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 514
Target Start/End: Complemental strand, 325508 - 325432
Alignment:
Q  438 atcttaaatttaatggtcaaaacttacttttccatggtgggaaacaacattcctttcccgggctaaacctcacctta 514  Q
    ||||||||| ||||||| |||| |||||||  |||||||  ||||||||||| ||||||  ||||||||||||||||    
T  325508 atcttaaatctaatggttaaaatttactttctcatggtgaaaaacaacattcatttcccatgctaaacctcacctta 325432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 514 - 582
Target Start/End: Complemental strand, 19525416 - 19525348
Alignment:
Q  514 aaattaaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||| ||||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  19525416 aaataaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 19525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 26403299 - 26403363
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||| |   ||||||||||||| ||||| ||||||||||| ||||||||||||    
T  26403299 taaggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactat 26403363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 18677971 - 18678032
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| |||||||||||| ||||||||| |||||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactat 18678032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 19523978 - 19524039
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||| ||| ||  |||| |||||||| ||||||||||||||||| ||||||||||||    
T  19523978 ggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactat 19524039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 514 - 578
Target Start/End: Complemental strand, 1273468 - 1273404
Alignment:
Q  514 aaattaaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaa 578  Q
    |||| ||||||||||| ||||||  |||| |||||||| |||||||||||| |||| ||||||||    
T  1273468 aaatgaaggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaa 1273404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 1663179 - 1663243
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||| ||  |||| |||||||| |||||| ||||| |||||||| ||||||||    
T  1663179 taaggcttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactat 1663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 12936225 - 12936162
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  12936225 aaggcttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactat 12936162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 41905168 - 41905231
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  41905168 aaggcttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactat 41905231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Original strand, 40058036 - 40058074
Alignment:
Q  544 ttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  40058036 ttaacttatttttggttttcattttgatcccttaactat 40058074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 582
Target Start/End: Complemental strand, 5384471 - 5384406
Alignment:
Q  517 ttaaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||| ||  || | |||| ||| ||||| |||||||||||||||| |||||||    
T  5384471 ttaaggcttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactat 5384406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 580
Target Start/End: Original strand, 32411957 - 32412018
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaact 580  Q
    ||||||||||||||  ||  |||| |||||||| |||||| |||||||||| ||||||||||    
T  32411957 aaggcttaatacatgttttggtcccttaacttatttttggatttcaatttggtcccttaact 32412018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 5e-79; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 10200308 - 10200476
Alignment:
Q  18 aatggaattgtgtgtcctatttgttaattttatcatagtttctctgtaaaattgaattaaattaaaattatgttttgcaaaactcgaattgcaactcagc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10200308 aatggaattgtgtgtcctatttgttaattttatcatagtttctcagtaaaattgaattaaattaaaactatgttttgcaaaactcgaattgcaactcagc 10200407  T
Q  118 tcaaagtatatccattaatgatttctataatccaattttgtttgagatagcaaaggaaggggatgaaatt 187  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10200408 tcaaagtatatccattaatgatttctataatccaa-tttgtttgagataacaaaggaaggggatgaaatt 10200476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 46457063 - 46457126
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||||  || | |||||||| ||||||||||||||||||||||||||||||    
T  46457063 aaggcttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactat 46457126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 46675057 - 46674994
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||   ||| |||||||| ||||||||||||||||||||||||||||||    
T  46675057 aaggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactat 46674994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 10200184 - 10200091
Alignment:
Q  422 gataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgggaaacaacattcctttcccgggctaaacctcaccttaaa 516  Q
    |||||||||||||||| |||||||| ||||||||  |||||||||| | ||||||| | |||||||| |||| |  |||||||||||||| ||||    
T  10200184 gataagatcaatgctcctcttaaatctaatggtcgcaacttactttcctatggtggaagacaacatt-cttttcgaggctaaacctcaccataaa 10200091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 524 - 582
Target Start/End: Complemental strand, 25155054 - 25154996
Alignment:
Q  524 ttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||| ||  |||| |||||||| ||||||||||||||||||||||||||||||    
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactat 25154996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 514 - 582
Target Start/End: Complemental strand, 22061923 - 22061855
Alignment:
Q  514 aaattaaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||||||| || ||||| |||||||| |||  |||||||||||| |||| |||||||    
T  22061923 aaattaaggcttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactat 22061855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 33458303 - 33458366
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||||| |||| ||| ||||||||    
T  33458303 aaggcttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactat 33458366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 43006379 - 43006441
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  43006379 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 43006441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 14107827 - 14107888
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  ||| ||||||||| |||||||||||| |||| ||||||||||||    
T  14107827 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactat 14107888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 14417784 - 14417845
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  ||| ||||||||| |||||||||||| |||| ||||||||||||    
T  14417784 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactat 14417845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 520 - 580
Target Start/End: Original strand, 28648284 - 28648344
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaact 580  Q
    |||||||||||||  ||  |||| ||||||||||||||| ||||||||||||||| |||||    
T  28648284 aggcttaatacatgttttggtcccttaacttaattttggatttcaatttgatcccctaact 28648344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 582
Target Start/End: Complemental strand, 19279731 - 19279672
Alignment:
Q  523 cttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  19279731 cttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactat 19279672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 40320410 - 40320460
Alignment:
Q  463 acttttccatggtgggaaacaacattcctttcccgggctaaacctcacctt 513  Q
    |||||||||||||||||||||||  |||||||||  |||||||| ||||||    
T  40320410 acttttccatggtgggaaacaactctcctttcccatgctaaaccccacctt 40320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 40926640 - 40926579
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  40926640 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactat 40926579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 46458834 - 46458773
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||  |||| |||| | | ||||| ||||||||||| ||||||||||||    
T  46458834 ggcttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactat 46458773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 4858464 - 4858404
Alignment:
Q  522 gcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||| ||  |||| |||||||| |||| ||||||| ||||||||| |||||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactat 4858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 147; Significance: 3e-77; HSPs: 2)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 20614 - 20445
Alignment:
Q  18 aatggaattgtgtgtcctatttgttaattttatcatagtttctctgtaaaattgaattaaattaaaattatgttttgcaaaactcgaattgcaactcagc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  20614 aatggaattgtgtgtcctatttgttaattttatcatagtttctctgtaaaattgaattaaattaaaactatgtttcgcaaaactcaaattgcaactcagc 20515  T
Q  118 tcaaagtatatccattaatgatttctataatccaattttgtttgagatagcaaaggaaggggatgaaattg 188  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20514 tcaaagtatatccattaatgatttctataatccaa-tttgtttgagataacaaaggaaggggatgaaattg 20445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 20738 - 20810
Alignment:
Q  422 gataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgggaaacaacattcctttc 494  Q
    |||||||||||||||  ||| |||| ||||||||  |||||||||||||||||||||||||||||||| ||||    
T  20738 gataagatcaatgcttctctgaaatctaatggtcgcaacttacttttccatggtgggaaacaacattcttttc 20810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 379 - 481
Target Start/End: Complemental strand, 462 - 360
Alignment:
Q  379 gtggtagaagaaagtgggaaaaaatgtaatgtgaaaagaccaggataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtggg 478  Q
    ||||||||||||||||| ||||||| | ||||||| |||| |  |||||||||||| ||||||||||| ||||||||||||| |||||| | ||||||||    
T  462 gtggtagaagaaagtggaaaaaaatcttatgtgaagagactatcataagatcaatgttcatcttaaatctaatggtcaaaacctactttcctatggtggg 363  T
Q  479 aaa 481  Q
    |||    
T  362 aaa 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 379 - 477
Target Start/End: Complemental strand, 32355997 - 32355898
Alignment:
Q  379 gtggtagaagaaagtgggaaaaaa-tgtaatgtgaaaagaccaggataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgg 477  Q
    ||||||||||||||||| |||||| | || |||||| |||| |  |||||||||||| ||||||||||| ||||||||||||| |||||| | |||||||    
T  32355997 gtggtagaagaaagtggaaaaaaaatctagtgtgaagagactatcataagatcaatgttcatcttaaatctaatggtcaaaacctactttcctatggtgg 32355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 41386123 - 41386186
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  41386123 aaggcttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactat 41386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 41387556 - 41387493
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  41387556 aaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 41387493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 17350223 - 17350162
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  17350223 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactat 17350162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 42632701 - 42632762
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  42632701 ggcttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactat 42632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 8372740 - 8372676
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||| ||||||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  8372740 taaggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactat 8372676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 32356194 - 32356131
Alignment:
Q  132 ttaatgatttctataatccaattttgtttgagatagcaaaggaaggggatgaaattgaaaaatca 196  Q
    |||||||||||||||||  ||||| | |||||||| |||||||| | ||||||||||||||||||    
T  32356194 ttaatgatttctataatttaattt-gattgagataacaaaggaatgagatgaaattgaaaaatca 32356131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 32356314 - 32356279
Alignment:
Q  25 ttgtgtgtcctatttgttaattttatcatagtttct 60  Q
    |||||||||||||||||| |||||||||||||||||    
T  32356314 ttgtgtgtcctatttgttgattttatcatagtttct 32356279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 42634009 - 42633946
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  |||| |||||||| ||||| ||||||||||| |||| |||||||    
T  42634009 aaggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 42633946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 49122123 - 49122062
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||| ||| ||  ||||||||||||| |||||||||||| |||| || |||||||||    
T  49122123 ggcttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactat 49122062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 54654087 - 54654026
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| |||||| ||||| |||| ||||||||||||    
T  54654087 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactat 54654026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 19690698 - 19690646
Alignment:
Q  463 acttttccatggtgggaaacaacattcctttcccgggctaaacctcaccttaa 515  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||||  ||||||||    
T  19690698 actttcccatggtgggaaaaaacattcctatcccaggctaaacaccaccttaa 19690646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 32356100 - 32356068
Alignment:
Q  276 aatactttcagccaagtggaaaaatagattgtt 308  Q
    ||||||||||||||| |||||||||||||||||    
T  32356100 aatactttcagccaaatggaaaaatagattgtt 32356068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 463 - 578
Target Start/End: Original strand, 35943839 - 35943959
Alignment:
Q  463 acttttccatggtgggaaacaacattcctttcccgggctaaacctcacct-----taaattaaggcttaatacatcgttctgtcctttaacttaattttg 557  Q
    |||||||||| |||||||||||   |||||||||  |||||||| ||||      ||||||| ||||||||||||||||  |||| |||||||| |||||    
T  35943839 acttttccatagtgggaaacaattctcctttcccatgctaaaccccacccaacaataaattacggcttaatacatcgtttggtcccttaacttatttttg 35943938  T
Q  558 gttttcaatttgatcccttaa 578  Q
    ||||||| |||| ||||||||    
T  35943939 gttttcattttggtcccttaa 35943959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 19915028 - 19914966
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| |||  ||||||||||||| ||| ||||||||||||| ||||||||||||    
T  19915028 aggcttaatacatggtttggtcctttaacttattttgggttttcaatttggtcccttaactat 19914966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 10053867 - 10053804
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  |||| |||||||| |||||||||||| |||| ||||||||||||    
T  10053867 aaggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactat 10053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 31623900 - 31623962
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  31623900 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 31623962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 36940153 - 36940093
Alignment:
Q  522 gcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||| ||  |||| |||||||| |||||||||||| ||||||||| |||||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactat 36940093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 539 - 582
Target Start/End: Complemental strand, 24069549 - 24069506
Alignment:
Q  539 gtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||| |||||||| |||||||||||| |||||||||||||||||    
T  24069549 gtcccttaacttatttttggttttcattttgatcccttaactat 24069506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 37472396 - 37472459
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||| |||||| |||  |||||||    
T  37472396 aaggcttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactat 37472459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 524 - 582
Target Start/End: Original strand, 4807364 - 4807422
Alignment:
Q  524 ttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||| ||| ||||||||||||| ||||| |||| |||||| |||| |||||||    
T  4807364 ttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactat 4807422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 578
Target Start/End: Complemental strand, 27750723 - 27750685
Alignment:
Q  540 tcctttaacttaattttggttttcaatttgatcccttaa 578  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  27750723 tcctttaacttatttttggttttcaatttgatccgttaa 27750685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 29739765 - 29739703
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  |||  |||| ||| |||||||||||||||||||||| |||||||    
T  29739765 aggcttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactat 29739703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 41866888 - 41866950
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||| | ||  |||| |||||||| ||||| |||||| |||||||||||||||||    
T  41866888 aggcttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactat 41866950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 7486092 - 7486133
Alignment:
Q  541 cctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  7486092 cctttaatttatttttggttttcattttgatcccttaactat 7486133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 37474157 - 37474096
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||   ||| |||||||| || |||||||||||||| ||||||||||||    
T  37474157 ggcttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactat 37474096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 38591128 - 38591067
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| ||||| ||||||||||| |||| |||||||    
T  38591128 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 38591067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 40449538 - 40449497
Alignment:
Q  444 aatttaatggtcaaaacttacttttccatggtgggaaacaac 485  Q
    ||||||||||| |||| ||||||||||||||| |||||||||    
T  40449538 aatttaatggttaaaatttacttttccatggtaggaaacaac 40449497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 481
Target Start/End: Complemental strand, 33801565 - 33801529
Alignment:
Q  445 atttaatggtcaaaacttacttttccatggtgggaaa 481  Q
    ||||||||||||| | |||||||||||||||||||||    
T  33801565 atttaatggtcaatatttacttttccatggtgggaaa 33801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 37276363 - 37276303
Alignment:
Q  522 gcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||| ||  |||| |||| ||| ||||| |||||| |||||||||||||||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactat 37276303  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 31740394 - 31740332
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| |||  ||||||||||||| |||| |||||||||||| ||||||||||||    
T  31740394 aggcttaatacatggtttggtcctttaacttattttttgttttcaatttggtcccttaactat 31740332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 31738355 - 31738419
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  31738355 taaggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactat 31738419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 5311271 - 5311335
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||| ||  |||| |||||||| ||||||||||||||||  |||| |||||||    
T  5311271 taaggcttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactat 5311335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 33802137 - 33802077
Alignment:
Q  522 gcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||| ||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 33802077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 379 - 477
Target Start/End: Complemental strand, 6182224 - 6182126
Alignment:
Q  379 gtggtagaagaaagtgggaaaaaatgtaatgtgaaaagaccaggataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgg 477  Q
    ||||||||||||||||| ||||||| | |  |||| |||| |  |||||||||||| ||||||||||| ||||||||||||  |||||| | |||||||    
T  6182224 gtggtagaagaaagtggaaaaaaattttagttgaagagactatcataagatcaatgttcatcttaaatctaatggtcaaaatctactttcctatggtgg 6182126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 37867751 - 37867812
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| |||||||||||||||||||||| |||||||    
T  37867751 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactat 37867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 496
Target Start/End: Original strand, 44094776 - 44094850
Alignment:
Q  422 gataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgggaaacaacattcctttccc 496  Q
    ||||| |||| ||||| |||| ||||||||||||||||   ||||||  ||||||||||||||| ||||||||||    
T  44094776 gataaaatcagtgctcctctttaatttaatggtcaaaaaaaacttttttatggtgggaaacaactttcctttccc 44094850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 2581798 - 2581859
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||| |||||||| ||  ||||| ||||||| |||||||||||||||||||||| |||||||    
T  2581798 ggctaaatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactat 2581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 6182421 - 6182358
Alignment:
Q  132 ttaatgatttctataatccaattttgtttgagatagcaaaggaaggggatgaaattgaaaaatca 196  Q
    |||||||||||||||||  ||||| | |||||||| |||||||| | ||||||||||||||||||    
T  6182421 ttaatgatttctataatttaattt-gattgagataacaaaggaatgagatgaaattgaaaaatca 6182358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 512
Target Start/End: Complemental strand, 36391020 - 36390956
Alignment:
Q  448 taatggtcaaaacttacttttccatggtgggaaacaacattcctttcccgggctaaacctcacct 512  Q
    ||||||| |||| ||||||| ||||||||||||||||| | ||||||||  |||||||| |||||    
T  36391020 taatggttaaaatttactttcccatggtgggaaacaacttccctttcccatgctaaaccccacct 36390956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 2583669 - 2583606
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||||  ||||| ||||||| |||||||||| |||||  |||| |||||||    
T  2583669 aaggcttaatacatcgtttggtcctctaacttatttttggtttttaattttgtcccctaactat 2583606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 6182327 - 6182284
Alignment:
Q  276 aatactttcagccaagtggaaaaatagattgttgtagtgtagag 319  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||    
T  6182327 aatactttcagccaaatggaaaaatagattgttgatgtgtagag 6182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 6182541 - 6182506
Alignment:
Q  25 ttgtgtgtcctatttgttaattttatcatagtttct 60  Q
    |||||||||||||||||| |||||||||||||||||    
T  6182541 ttgtgtgtcctatttgttgattttatcatagtttct 6182506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 7036959 - 7037022
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  ||||||||||||| |||||| ||||| |||  ||||||||||||    
T  7036959 aaggcttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactat 7037022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 37869163 - 37869100
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||| || |||  |||| |||||||| ||||| ||||||||||| ||||||||||||    
T  37869163 aaggcttaatatattgtttggtcccttaacttatttttgattttcaatttggtcccttaactat 37869100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 7038454 - 7038392
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  |||| |||||||| |||||| ||||| |||| ||||||||||||    
T  7038454 aggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactat 7038392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 4975762 - 4975722
Alignment:
Q  445 atttaatggtcaaaacttacttttccatggtgggaaacaac 485  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  4975762 atttaatggtcaaaattagcttttccatggtgggaaacaac 4975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 511
Target Start/End: Original strand, 10670942 - 10670990
Alignment:
Q  463 acttttccatggtgggaaacaacattcctttcccgggctaaacctcacc 511  Q
    ||||||||||||||  ||||||| ||||||||||  |||||||||||||    
T  10670942 acttttccatggtgaaaaacaactttcctttcccatgctaaacctcacc 10670990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 512
Target Start/End: Complemental strand, 34617716 - 34617652
Alignment:
Q  448 taatggtcaaaacttacttttccatggtgggaaacaacattcctttcccgggctaaacctcacct 512  Q
    |||||||||||| | ||||| ||||||||||||||||   |||||||||  |||||||| |||||    
T  34617716 taatggtcaaaaataactttcccatggtgggaaacaattatcctttcccatgctaaaccccacct 34617652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 517 - 582
Target Start/End: Complemental strand, 37560424 - 37560359
Alignment:
Q  517 ttaaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  37560424 ttaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 37560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 44128456 - 44128394
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||||  ||||||||||||| ||||  ||||||||||| |||| |||||||    
T  44128456 aggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactat 44128394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 29686251 - 29686312
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| ||  |||| |||||||| |||||||||||| |||| ||||||||||||    
T  29686251 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactat 29686312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 46796150 - 46796086
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||||||  |||| |||||||| |||||||||| | |||| |||| |||||||    
T  46796150 taaggcttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactat 46796086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 496
Target Start/End: Original strand, 231983 - 232082
Alignment:
Q  397 aaaaaatgtaatgtgaaaagaccaggataagatcaatgctcatcttaaatttaatggtcaaaacttacttttccatggtgggaaacaacattcctttccc 496  Q
    ||||||| || |||| | |||| | ||||||||||||| || || |  || ||||||| |||| ||||||| ||||||||||||||||| | ||||||||    
T  231983 aaaaaatttagtgtggagagactatgataagatcaatgttcctcatttatctaatggttaaaatttactttcccatggtgggaaacaacttccctttccc 232082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 39590934 - 39590997
Alignment:
Q  519 aaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||| ||  |||| |||||||| |||||||||||| |||| |||| |||||||    
T  39590934 aaggcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 39590997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 582
Target Start/End: Complemental strand, 33377486 - 33377424
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  |||| |||||||| ||||| ||||||||||| |||| |||||||    
T  33377486 aggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 33377424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 37558992 - 37559054
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  || | |||||||| ||||||||||||||||| |||| |||||||    
T  37558992 aggcttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactat 37559054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 512
Target Start/End: Complemental strand, 41261170 - 41261121
Alignment:
Q  463 acttttccatggtgggaaacaacattcctttcccgggctaaacctcacct 512  Q
    ||||| ||||||||| ||||||| ||||||||||  ||||||||||||||    
T  41261170 actttcccatggtggaaaacaactttcctttcccatgctaaacctcacct 41261121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 512
Target Start/End: Original strand, 34155611 - 34155675
Alignment:
Q  448 taatggtcaaaacttacttttccatggtgggaaacaacattcctttcccgggctaaacctcacct 512  Q
    ||||||||||||  |||||||||||||||| ||||||  | ||||||||  |||||||| |||||    
T  34155611 taatggtcaaaaaatacttttccatggtggaaaacaagttccctttcccatgctaaaccccacct 34155675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 49141617 - 49141556
Alignment:
Q  521 ggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||  ||||||||| ||| |||||||||||| || ||||||||||||||    
T  49141617 ggcttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactat 49141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 25787288 - 25787224
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  25787288 taaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 25787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 523 - 582
Target Start/End: Original strand, 13929292 - 13929351
Alignment:
Q  523 cttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||| ||  |||| |||||||| ||||||||||||||||| ||||||||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactat 13929351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 582
Target Start/End: Original strand, 25785962 - 25786024
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||| ||  |||| |||||||| ||||||||||||||||| |||| |||||||    
T  25785962 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 25786024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 5101060 - 5101017
Alignment:
Q  276 aatactttcagccaagtggaaaaatagattgttgtagtgtagag 319  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||    
T  5101060 aatactttcagccaaatggaaaaatagattgttgatgtgtagag 5101017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 5101276 - 5101241
Alignment:
Q  25 ttgtgtgtcctatttgttaattttatcatagtttct 60  Q
    |||||||||||||||||| |||||||||||||||||    
T  5101276 ttgtgtgtcctatttgttgattttatcatagtttct 5101241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 539 - 582
Target Start/End: Original strand, 9633788 - 9633831
Alignment:
Q  539 gtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||    
T  9633788 gtcctttaacttatttttggttttcattttggtcccttaactat 9633831  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 5101154 - 5101094
Alignment:
Q  132 ttaatgatttctataatccaattttgtttgagatagcaaaggaaggggatgaaattgaaaaa 193  Q
    |||||||||||||||||  ||||| | |||||||| |||||||| | |||||||||||||||    
T  5101154 ttaatgatttctataatttaattt-gattgagataacaaaggaatgagatgaaattgaaaaa 5101094  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 14071327 - 14071263
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    |||||||||||||||| ||  |||| |||| ||| ||||||||||||||||| |||  |||||||    
T  14071327 taaggcttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactat 14071263  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 579
Target Start/End: Complemental strand, 96937 - 96878
Alignment:
Q  520 aggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaac 579  Q
    |||||||||||||| ||   ||| |||||||| |||||||||||||||||||||| ||||    
T  96937 aggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaac 96878  T

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Target: scaffold0046 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 582
Target Start/End: Original strand, 23397 - 23462
Alignment:
Q  517 ttaaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatcccttaactat 582  Q
    ||||||||||||||||| |   |||| |||||||| |||||||||||| |||| |||| |||||||    
T  23397 ttaaggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactat 23462  T

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Target: scaffold0046; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 24939 - 24883
Alignment:
Q  518 taaggcttaatacatcgttctgtcctttaacttaattttggttttcaatttgatccc 574  Q
    |||||||||||||||||||  |||| |||| ||| |||||||||||| |||| ||||    
T  24939 taaggcttaatacatcgtttggtcccttaatttatttttggttttcagtttggtccc 24883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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