View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11640_low_4 (Length: 606)

Name: NF11640_low_4
Description: NF11640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11640_low_4
NF11640_low_4
[»] chr4 (49 HSPs)
chr4 (283-604)||(46749671-46749992)
chr4 (1-194)||(46750079-46750272)
chr4 (484-546)||(20601690-20601752)
chr4 (463-546)||(1793644-1793727)
chr4 (489-546)||(16003108-16003165)
chr4 (486-546)||(39708615-39708675)
chr4 (448-545)||(26037507-26037604)
chr4 (448-545)||(56375473-56375570)
chr4 (486-546)||(6957780-6957840)
chr4 (486-546)||(8286621-8286681)
chr4 (488-545)||(53518365-53518422)
chr4 (486-546)||(7947119-7947179)
chr4 (486-546)||(27450220-27450279)
chr4 (486-546)||(33227391-33227451)
chr4 (490-546)||(41729494-41729550)
chr4 (474-546)||(47265223-47265295)
chr4 (474-546)||(48174121-48174193)
chr4 (486-546)||(51811318-51811378)
chr4 (486-545)||(34208309-34208368)
chr4 (486-545)||(51421913-51421972)
chr4 (488-546)||(19154905-19154963)
chr4 (448-546)||(19969363-19969461)
chr4 (493-546)||(20591353-20591405)
chr4 (489-546)||(53707976-53708033)
chr4 (486-546)||(4441035-4441095)
chr4 (489-545)||(5306479-5306535)
chr4 (486-546)||(12494845-12494905)
chr4 (486-546)||(21528470-21528530)
chr4 (486-546)||(23906337-23906397)
chr4 (477-545)||(28486104-28486172)
chr4 (486-546)||(31959854-31959914)
chr4 (486-546)||(32479220-32479280)
chr4 (486-546)||(52569555-52569615)
chr4 (463-546)||(1777034-1777117)
chr4 (474-545)||(16875780-16875851)
chr4 (515-546)||(20821077-20821108)
chr4 (463-546)||(37773468-37773551)
chr4 (486-545)||(51438628-51438687)
chr4 (486-545)||(55007929-55007988)
chr4 (448-502)||(25427864-25427918)
chr4 (479-545)||(25575007-25575073)
chr4 (496-546)||(50679686-50679736)
chr4 (486-523)||(3979125-3979162)
chr4 (486-546)||(4548204-4548264)
chr4 (486-546)||(21237040-21237100)
chr4 (486-546)||(33190888-33190948)
chr4 (484-540)||(38841642-38841698)
chr4 (510-546)||(41009283-41009319)
chr4 (486-546)||(46582865-46582925)
[»] scaffold0024 (1 HSPs)
scaffold0024 (469-546)||(82900-82977)
[»] chr7 (51 HSPs)
chr7 (486-546)||(7273282-7273342)
chr7 (486-546)||(40979968-40980028)
chr7 (486-536)||(44951347-44951397)
chr7 (448-546)||(45836484-45836582)
chr7 (486-546)||(15682356-15682416)
chr7 (486-546)||(31681060-31681120)
chr7 (486-546)||(43491490-43491550)
chr7 (486-545)||(9210744-9210803)
chr7 (486-545)||(36101817-36101876)
chr7 (486-545)||(45601659-45601718)
chr7 (488-546)||(36869286-36869344)
chr7 (492-541)||(21517426-21517475)
chr7 (486-546)||(2885762-2885822)
chr7 (486-546)||(27648962-27649022)
chr7 (486-546)||(34035194-34035254)
chr7 (486-542)||(36239836-36239892)
chr7 (486-546)||(43281856-43281916)
chr7 (486-546)||(48919294-48919354)
chr7 (486-541)||(28208368-28208423)
chr7 (486-545)||(28627973-28628032)
chr7 (463-546)||(31859057-31859140)
chr7 (484-545)||(35922436-35922497)
chr7 (448-545)||(40008433-40008530)
chr7 (486-531)||(44401167-44401212)
chr7 (445-546)||(46355855-46355956)
chr7 (443-523)||(9796289-9796369)
chr7 (486-546)||(11594142-11594202)
chr7 (486-546)||(12841315-12841375)
chr7 (486-546)||(33073111-33073171)
chr7 (486-546)||(34869602-34869662)
chr7 (486-546)||(35906241-35906301)
chr7 (486-546)||(38607174-38607234)
chr7 (486-546)||(49029458-49029518)
chr7 (486-545)||(14057661-14057720)
chr7 (486-545)||(14367689-14367748)
chr7 (486-541)||(30814165-30814220)
chr7 (494-545)||(34341443-34341494)
chr7 (486-528)||(48515475-48515517)
chr7 (486-531)||(26332913-26332958)
chr7 (484-545)||(26741932-26741993)
chr7 (486-546)||(44855214-44855272)
chr7 (486-546)||(21078099-21078159)
chr7 (485-545)||(24434402-24434462)
chr7 (508-544)||(28545932-28545968)
chr7 (486-546)||(29650566-29650626)
chr7 (486-546)||(31682642-31682702)
chr7 (486-546)||(32631746-32631806)
chr7 (486-546)||(36652174-36652234)
chr7 (486-546)||(38900139-38900199)
chr7 (486-546)||(39906412-39906472)
chr7 (485-529)||(45903913-45903957)
[»] chr6 (27 HSPs)
chr6 (474-546)||(30031438-30031510)
chr6 (486-546)||(5081022-5081082)
chr6 (484-546)||(33497141-33497203)
chr6 (448-545)||(34507-34604)
chr6 (485-546)||(5632004-5632065)
chr6 (486-546)||(12890757-12890817)
chr6 (463-546)||(21351854-21351937)
chr6 (486-546)||(608343-608403)
chr6 (486-546)||(3206499-3206559)
chr6 (486-546)||(31819013-31819073)
chr6 (486-542)||(32080655-32080711)
chr6 (486-546)||(32756103-32756163)
chr6 (486-546)||(34143805-34143865)
chr6 (486-546)||(34156421-34156481)
chr6 (486-546)||(35043481-35043541)
chr6 (486-545)||(3210548-3210607)
chr6 (486-545)||(5096017-5096076)
chr6 (486-545)||(9706953-9707012)
chr6 (486-545)||(31818714-31818773)
chr6 (485-546)||(10098935-10098994)
chr6 (486-536)||(12119683-12119733)
chr6 (492-546)||(24665993-24666047)
chr6 (476-521)||(1615253-1615298)
chr6 (486-531)||(7513030-7513075)
chr6 (486-546)||(28085558-28085618)
chr6 (486-538)||(32097927-32097979)
chr6 (486-546)||(34934870-34934930)
[»] chr3 (36 HSPs)
chr3 (486-546)||(48508417-48508477)
chr3 (486-546)||(48953459-48953519)
chr3 (448-546)||(38060896-38060994)
chr3 (486-546)||(38850303-38850363)
chr3 (486-545)||(29601075-29601134)
chr3 (486-545)||(39208791-39208850)
chr3 (463-546)||(53519762-53519845)
chr3 (476-546)||(35033328-35033398)
chr3 (448-546)||(52156086-52156184)
chr3 (473-531)||(54365002-54365060)
chr3 (486-546)||(5169014-5169074)
chr3 (486-545)||(49042119-49042179)
chr3 (486-546)||(52138982-52139042)
chr3 (486-545)||(23534610-23534669)
chr3 (486-545)||(40106660-40106719)
chr3 (486-540)||(4472427-4472481)
chr3 (486-544)||(48712115-48712173)
chr3 (448-545)||(36304149-36304246)
chr3 (486-546)||(22254-22314)
chr3 (486-546)||(2133652-2133712)
chr3 (486-546)||(12096745-12096805)
chr3 (486-546)||(28245619-28245679)
chr3 (486-546)||(47555372-47555432)
chr3 (486-546)||(53262323-53262383)
chr3 (486-546)||(54128561-54128621)
chr3 (474-541)||(30797850-30797917)
chr3 (463-541)||(32170592-32170670)
chr3 (463-545)||(40991614-40991696)
chr3 (487-545)||(45289132-45289190)
chr3 (505-546)||(30294180-30294221)
chr3 (486-545)||(49888373-49888429)
chr3 (488-545)||(52678892-52678949)
chr3 (489-545)||(29475869-29475925)
chr3 (477-545)||(40116369-40116437)
chr3 (486-546)||(51447757-51447817)
chr3 (486-546)||(54279202-54279262)
[»] scaffold0199 (1 HSPs)
scaffold0199 (486-546)||(14765-14825)
[»] chr2 (30 HSPs)
chr2 (474-546)||(31959703-31959775)
chr2 (487-545)||(45367666-45367724)
chr2 (486-546)||(12734882-12734942)
chr2 (463-546)||(2610770-2610853)
chr2 (486-545)||(9496049-9496108)
chr2 (463-546)||(38430066-38430149)
chr2 (461-544)||(41545589-41545672)
chr2 (486-546)||(3635363-3635423)
chr2 (486-542)||(9996666-9996722)
chr2 (486-530)||(12520102-12520146)
chr2 (486-546)||(23997784-23997844)
chr2 (486-546)||(25834860-25834920)
chr2 (486-546)||(28508860-28508920)
chr2 (486-545)||(19336933-19336992)
chr2 (486-545)||(43573170-43573229)
chr2 (486-543)||(30306217-30306274)
chr2 (486-543)||(39709241-39709298)
chr2 (486-546)||(227371-227431)
chr2 (486-546)||(3866254-3866314)
chr2 (486-546)||(7326200-7326260)
chr2 (486-546)||(11992148-11992208)
chr2 (486-530)||(18424417-18424461)
chr2 (486-546)||(39029763-39029823)
chr2 (486-545)||(12882085-12882144)
chr2 (486-528)||(10516789-10516831)
chr2 (488-545)||(35755287-35755344)
chr2 (488-528)||(23915735-23915775)
chr2 (489-541)||(33504411-33504463)
chr2 (486-546)||(36183633-36183693)
chr2 (486-546)||(38452726-38452786)
[»] chr1 (40 HSPs)
chr1 (486-546)||(15086104-15086164)
chr1 (486-546)||(39318311-39318371)
chr1 (448-544)||(10200308-10200404)
chr1 (486-546)||(25979271-25979331)
chr1 (463-546)||(22090278-22090361)
chr1 (463-546)||(34792366-34792449)
chr1 (488-546)||(24020309-24020367)
chr1 (448-545)||(5338896-5338993)
chr1 (486-543)||(12930351-12930408)
chr1 (469-545)||(27520230-27520306)
chr1 (486-546)||(37311795-37311855)
chr1 (486-545)||(6084158-6084217)
chr1 (486-545)||(41560412-41560471)
chr1 (486-545)||(52900682-52900741)
chr1 (448-538)||(28090696-28090786)
chr1 (492-545)||(4707266-4707319)
chr1 (486-546)||(1210927-1210987)
chr1 (486-546)||(4001495-4001555)
chr1 (486-546)||(8391954-8392014)
chr1 (489-541)||(11331247-11331299)
chr1 (489-541)||(11489268-11489320)
chr1 (486-546)||(30202170-30202230)
chr1 (486-546)||(40568450-40568510)
chr1 (474-546)||(43240407-43240479)
chr1 (486-546)||(49347433-49347493)
chr1 (486-546)||(52921262-52921322)
chr1 (484-531)||(5038783-5038830)
chr1 (485-532)||(19822084-19822131)
chr1 (486-545)||(19908075-19908134)
chr1 (490-545)||(31979646-31979701)
chr1 (486-545)||(34444539-34444598)
chr1 (448-546)||(4029304-4029402)
chr1 (448-522)||(28533673-28533747)
chr1 (487-545)||(39776936-39776994)
chr1 (486-532)||(44941816-44941862)
chr1 (479-545)||(50806850-50806916)
chr1 (448-546)||(51440767-51440865)
chr1 (474-531)||(25715354-25715411)
chr1 (486-531)||(27072527-27072572)
chr1 (486-546)||(32082796-32082857)
[»] scaffold0045 (1 HSPs)
scaffold0045 (486-540)||(86649-86703)
[»] chr8 (34 HSPs)
chr8 (486-546)||(25300281-25300341)
chr8 (485-545)||(30559876-30559936)
chr8 (486-545)||(29520832-29520891)
chr8 (486-544)||(490519-490577)
chr8 (448-545)||(35914603-35914700)
chr8 (486-546)||(36545331-36545391)
chr8 (486-546)||(42469767-42469827)
chr8 (486-546)||(42854044-42854104)
chr8 (443-546)||(36565238-36565341)
chr8 (486-545)||(43904705-43904764)
chr8 (492-546)||(21121328-21121382)
chr8 (479-545)||(21425229-21425295)
chr8 (492-546)||(25288946-25289000)
chr8 (448-545)||(4955374-4955471)
chr8 (484-545)||(28169575-28169636)
chr8 (492-545)||(42584542-42584595)
chr8 (486-546)||(11523763-11523823)
chr8 (486-546)||(12491178-12491238)
chr8 (486-546)||(44047572-44047632)
chr8 (486-546)||(44529407-44529467)
chr8 (491-546)||(2027712-2027767)
chr8 (486-545)||(8932886-8932945)
chr8 (486-545)||(28299999-28300058)
chr8 (486-541)||(31716007-31716062)
chr8 (463-545)||(23492217-23492299)
chr8 (479-545)||(28269713-28269778)
chr8 (484-545)||(7615629-7615690)
chr8 (505-546)||(18125354-18125395)
chr8 (486-523)||(30689940-30689977)
chr8 (488-545)||(35362692-35362749)
chr8 (487-531)||(10728755-10728799)
chr8 (479-546)||(12025959-12026029)
chr8 (486-546)||(15215452-15215512)
chr8 (439-519)||(36042407-36042487)
[»] chr5 (25 HSPs)
chr5 (448-545)||(14911355-14911452)
chr5 (486-546)||(5558323-5558383)
chr5 (489-545)||(20367076-20367132)
chr5 (486-546)||(38685149-38685209)
chr5 (486-545)||(418074-418133)
chr5 (474-545)||(6788250-6788321)
chr5 (474-545)||(14667954-14668025)
chr5 (463-546)||(34273195-34273278)
chr5 (463-541)||(32516742-32516819)
chr5 (486-531)||(26884729-26884774)
chr5 (486-546)||(3302026-3302086)
chr5 (486-546)||(10639484-10639544)
chr5 (486-546)||(13561426-13561486)
chr5 (486-546)||(16913923-16913983)
chr5 (486-546)||(28276420-28276480)
chr5 (486-546)||(29816564-29816624)
chr5 (486-546)||(30213757-30213817)
chr5 (486-541)||(28069-28124)
chr5 (486-545)||(32442165-32442224)
chr5 (492-546)||(42504293-42504347)
chr5 (486-531)||(7640547-7640592)
chr5 (486-546)||(2915536-2915595)
chr5 (486-546)||(4496566-4496626)
chr5 (486-546)||(12492424-12492484)
chr5 (486-546)||(28976899-28976959)
[»] scaffold0171 (1 HSPs)
scaffold0171 (488-541)||(7627-7680)
[»] scaffold0692 (1 HSPs)
scaffold0692 (486-546)||(4818-4878)
[»] scaffold0570 (1 HSPs)
scaffold0570 (486-546)||(988-1048)
[»] scaffold0157 (1 HSPs)
scaffold0157 (486-546)||(25572-25632)
[»] scaffold0041 (1 HSPs)
scaffold0041 (486-546)||(16760-16820)
[»] scaffold0036 (1 HSPs)
scaffold0036 (486-546)||(4321-4381)
[»] scaffold0050 (1 HSPs)
scaffold0050 (486-546)||(58266-58326)
[»] scaffold0018 (1 HSPs)
scaffold0018 (486-546)||(31650-31710)


Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-128; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 283 - 604
Target Start/End: Complemental strand, 46749992 - 46749671
Alignment:
Q  283 cttaatttatgtttcaataacacaagttaacatttcccaaataacaatattactatattaannnnnnnaatatatgttcggacacatattaacatttttt 382  Q
    |||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||    
T  46749992 cttaatttatgttttaaggatacaagttaacatttcccaaataacaatattactatattaagttttttaacatatgttcggacacatattaacatttttt 46749893  T
Q  383 aataaataaatatcatccttctattacgatgttacctttgtcttttctttagtgtaaacggcaaaaacaacaaccgaatattatctcatttagtgaggtc 482  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||||||| ||     
T  46749892 aataaataaatatcatccttctattacgatgttacctttgtcttttctttagtgtaagcggcaaaaacaacaattgagtattatctcatttagtgatgtt 46749793  T
Q  483 tgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattgcttttctttagtataagtcatattccaaaaatgaaa 582  Q
    ||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  46749792 tgttatatgaatcaaattacgtcataatattttatcataaatcatatttgaatccaactcattgcttttctttagtataagccatactccaaaaatgaaa 46749693  T
Q  583 aatgtatgtacttatactttgt 604  Q
    ||||||||||||||||||||||    
T  46749692 aatgtatgtacttatactttgt 46749671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 46750272 - 46750079
Alignment:
Q  1 gagagaagggaagttgagaagaggtggctttatttggagacagatggagagagatgaaagatagattaagcaaggccaacggcgtaggggccgccactgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46750272 gagagaagggaagttgagaagaggtggctttatttggagacagatggagagagatgaaagatagattaagcaaggccaacggcgtaggggccgccactgg 46750173  T
Q  101 aattcttaagggtcaacgaatgaggactattttttatgaacaaaataaatatgggttcgcctaacataggcacaagttaaggaacttacaaagg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46750172 aattcttaagggtcaacgaatgaggactattttttatgaacaaaataaatatgggttcgcctaacataggcacaagttaaggaacttaaaaagg 46750079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 484 - 546
Target Start/End: Original strand, 20601690 - 20601752
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  20601690 gttacatgaatcaaattacgtcataatgttctatcataaatcatatttgaatccaactcattg 20601752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 1793727 - 1793644
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| | |||||| || | |||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  1793727 ttatctcactaagtgagatcggctacatgaatcaaattacgtcatagtgctctatcataaatcatatttggatccaactcattg 1793644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 16003165 - 16003108
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  16003165 atggattaaattacgtcatagtgttttatcataaatcatatttagatccaactcattg 16003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 39708675 - 39708615
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  39708675 tacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattg 39708615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 545
Target Start/End: Original strand, 26037507 - 26037604
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| ||  ||||| || | |||| |||| | |||||||||| ||||||| ||||||||| ||||||||| |||||||| ||||||||||||    
T  26037507 aacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcatt 26037604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 545
Target Start/End: Complemental strand, 56375570 - 56375473
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| | | ||||| || | ||||||||| | |||||||||||||| ||||||||||||| ||||||| | || ||||| ||||||||||||    
T  56375570 aacaacaaccaagtcttatcccactaagtgaggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 56375473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 6957840 - 6957780
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||||| |||| ||||| |||||||||||||    
T  6957840 tacatggatcaaatgacgtcatagtgttctatcatacatcaaatttggatccaactcattg 6957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 8286681 - 8286621
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||||||| || ||||| |||||||||||||    
T  8286681 tacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcattg 8286621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 53518365 - 53518422
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||  ||||||||||||    
T  53518365 catggatcaaattacgccatagtgttctatcataaaccatatttagatccaactcatt 53518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 7947179 - 7947119
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||||| | |||||||| |||||||||||| ||||| |||||||| ||||    
T  7947179 tacatggatcaaattacatgatagtgttctatcataaatcaaatttggatccaactgattg 7947119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 27450220 - 27450279
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| |||||||||||| |||||||||||||    
T  27450220 tacatggatcaaatgacgccatagtgttctatca-aaatcatatttggatccaactcattg 27450279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 33227451 - 33227391
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  33227451 tacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 33227391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 546
Target Start/End: Original strand, 41729494 - 41729550
Alignment:
Q  490 tggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| |||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  41729494 tggatcaaactacgccatagtgttctatcataaaccatatttggatccaactcattg 41729550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 546
Target Start/End: Original strand, 47265223 - 47265295
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| | |||||||||||||||||   |||||||| ||||||| |||| ||||| |||||||||||||    
T  47265223 agtgaggtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcattg 47265295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 546
Target Start/End: Original strand, 48174121 - 48174193
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| |||||| |||||||||||||| ||| |||| |||||||||||| | || ||||| |||||||||||||    
T  48174121 agtggggtctgctacatggatcaaatgacgccataatgttttatcatacaccaaatttggatccaactcattg 48174193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 51811318 - 51811378
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||||||| ||| |||||||||    
T  51811318 tacatggatcaaatgacgtcatagtgttctatcaaaaaccatatttggatcaaactcattg 51811378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 34208309 - 34208368
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||| || |||| |||| ||||||||| |||||||| ||||||||||||    
T  34208309 tacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcatt 34208368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 51421972 - 51421913
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||||||||| |||| ||||||||| ||| |||| |||||| |||||    
T  51421972 tacatggatcaaattacgtcataatgttctatcataaaccatttttggatccaattcatt 51421913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 546
Target Start/End: Original strand, 19154905 - 19154963
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||| ||| ||||||||| ||||||||| || ||||| |||||||||||||    
T  19154905 catggatcaaataacgccatagtgttctatcataaaccaaatttggatccaactcattg 19154963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 546
Target Start/End: Complemental strand, 19969461 - 19969363
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||   ||||| || | |||| |||| | |||||||||||||| ||| ||||| ||| ||||||||| || ||||| |||||||||||||    
T  19969461 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagcgttctatcataaaccaaatttggatccaactcattg 19969363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 546
Target Start/End: Original strand, 20591353 - 20591405
Alignment:
Q  493 atcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||| ||||| |||||| || ||||||||||||||||||||||    
T  20591353 atcaaattacgtcattgtgttctatcat-aaccatatttgaatccaactcattg 20591405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 53708033 - 53707976
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  53708033 atggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 53707976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 4441095 - 4441035
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  4441095 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 4441035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 5306535 - 5306479
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||| |||| |||| | ||||||| |||||||| ||||||||||||    
T  5306535 atggatcaaattacgccataatgttatgtcataaaccatatttggatccaactcatt 5306479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 12494905 - 12494845
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| |||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  12494905 tacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 12494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 21528530 - 21528470
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||  |  ||||||||| ||||| ||| ||||||||||||||||||||||    
T  21528530 tacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcattg 21528470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 23906337 - 23906397
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  23906337 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 23906397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 28486172 - 28486104
Alignment:
Q  477 gaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||| | |||||||||||||||||| |||| ||||  ||  ||||||||||||| ||||||||||||    
T  28486172 gaggtcagctacatggatcaaattacgccatattgttcaattgtaaatcatatttggatccaactcatt 28486104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 31959854 - 31959914
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  31959854 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 31959914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 32479280 - 32479220
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||  |||||||||||||    
T  32479280 tacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcattg 32479220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 52569555 - 52569615
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  52569555 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 52569615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 1777034 - 1777117
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||| |||| |||| | |||||||||||||| ||| |||| |||| ||||||| | || ||||| |||||||||||||    
T  1777034 ttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcattg 1777117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 545
Target Start/End: Original strand, 16875780 - 16875851
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||||| |||||||||||| |||| | ||| |||| ||||||||||||||||||  |||||| ||||    
T  16875780 agtggggtctgctacatggatcaagttacataataatgttctatcataaatcatatttgggtccaacacatt 16875851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 546
Target Start/End: Original strand, 20821077 - 20821108
Alignment:
Q  515 tatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||||||||||||||||||||    
T  20821077 tatcataaatcatatttgaatccaactcattg 20821108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 37773468 - 37773551
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| || | |||| | || || |||||||||| ||||||||||| ||||||||| || || || |||||||||||||    
T  37773468 ttatctcattaagcggggtcggctatatagatcaaattatgtcatagtgttctatcataaaccaaatctggatccaactcattg 37773551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 51438687 - 51438628
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||| ||||| ||||||| | |||||||||||    
T  51438687 tacatggatcaaattacgccataatgttatattataaaccatatttcattccaactcatt 51438628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 55007988 - 55007929
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||||||||| || | ||||||||| |||||||   |||||||||||    
T  55007988 tacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcatt 55007929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 25427864 - 25427918
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattac 502  Q
    |||||||||| | | |||||||||| |||| |||| |||||||||||||||||||    
T  25427864 aacaacaaccaagtcttatctcattaagtggggtcggttacatggatcaaattac 25427918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 545
Target Start/End: Complemental strand, 25575073 - 25575007
Alignment:
Q  479 ggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||| |||||||||||||||||  || | |||| ||||||||| |||||||  ||||||||||||    
T  25575073 ggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcatt 25575007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 546
Target Start/End: Complemental strand, 50679736 - 50679686
Alignment:
Q  496 aaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| |||||||||| |||||||||||| || ||||| |||||||||||||    
T  50679736 aaatgacgtcatagtattttatcataaaccaaatttggatccaactcattg 50679686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 3979162 - 3979125
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaa 523  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  3979162 tacatggatcaaattacgtcataatgttctatcataaa 3979125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 4548264 - 4548204
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| | ||||||| ||||||||| || ||||  |||||||| ||||    
T  4548264 tacatggatcaaattacgccttagtgttctatcataaaccaaatttagatccaacttattg 4548204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 21237100 - 21237040
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| ||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  21237100 tacatgtatcaaatgacgccatagtgttctatcatataccaaatttggatccaactcattg 21237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 33190888 - 33190948
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||| |||||| ||||||||||||| ||||||| | || ||||| || ||||||||||    
T  33190888 tacatgggtcaaatgacgtcatagtgttctatcatacaccaaatttggattcaactcattg 33190948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 38841642 - 38841698
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaac 540  Q
    ||||||| |||||||| || |||||||||| ||| ||| | ||||||||||||||||    
T  38841642 gttacatagatcaaatcacatcatagtgttctattatagaacatatttgaatccaac 38841698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 546
Target Start/End: Original strand, 41009283 - 41009319
Alignment:
Q  510 tgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  41009283 tgttatatcataaaacatatttgaatccaactcattg 41009319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 46582865 - 46582925
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||| ||| ||||||| | || ||||| |||||||||||||    
T  46582865 tacatggatcaaatgacgccatagggttctatcatacaccaaatttggatccaactcattg 46582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 82977 - 82900
Alignment:
Q  469 catttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| |||| |||| | |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  82977 cattaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcataaatcatatttggatccaactcattg 82900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 7273342 - 7273282
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  7273342 tacatggatcaaattacgtcatagtgctatatcataaaccatatttgaatccaactcattg 7273282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 40979968 - 40980028
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  40979968 tacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattg 40980028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 44951397 - 44951347
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatc 536  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  44951397 tacatggatcaaattacgtcatagtgttctatcataaataatatttgaatc 44951347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 448 - 546
Target Start/End: Original strand, 45836484 - 45836582
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||   ||||| || | |||| |||| | |||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  45836484 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattg 45836582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 15682416 - 15682356
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  15682416 tacatggatcaaagtacgccatagtgttctatcataaatcatatttggatccaacttattg 15682356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 31681060 - 31681120
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||||||||||||| || ||||||||  |||||||| |||||||||||||    
T  31681060 tacatggatcaaattacgtcatagtattctatcataagccatatttggatccaactcattg 31681120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 43491550 - 43491490
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||| ||||    
T  43491550 tacatggatgaaattacatcatagtgttctatcataaatcatatttggatccaacttattg 43491490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 9210744 - 9210803
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||| ||||||||||||    
T  9210744 tacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcatt 9210803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 36101817 - 36101876
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||  ||||||||||||    
T  36101817 tacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcatt 36101876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 45601718 - 45601659
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||  ||||||||||||    
T  45601718 tacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcatt 45601659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 546
Target Start/End: Original strand, 36869286 - 36869344
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  36869286 catggatcaaatgacgccatagtgttctatcataaatcaaatttgaatctaactcattg 36869344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 21517426 - 21517475
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  21517426 gatcaaattacgtcataatgttatatcataaatcatatttggatccaact 21517475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 2885762 - 2885822
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||  ||||||||| ||||||||| ||||||||  ||||||||||||    
T  2885762 tacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcattg 2885822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 27649022 - 27648962
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| || |||||| ||||||||| || ||||| |||||||||||||    
T  27649022 tacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcattg 27648962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 34035194 - 34035254
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| |||||| || |||||||| |||||||||||||    
T  34035194 tacatggatcaaatgacgccatagtgttctatcatgaaccatatttggatccaactcattg 34035254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 36239836 - 36239892
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactc 542  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||| |||||||||    
T  36239836 tacatggatcaaattacgccataatgttctatcataaagcatatttggatccaactc 36239892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 43281916 - 43281856
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  43281916 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 43281856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 48919354 - 48919294
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||| ||||||||||| |||||||| ||| |||||||||    
T  48919354 tacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcattg 48919294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 28208368 - 28208423
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||||||||| ||| ||||||||| ||||||||| |||||||| ||||||||    
T  28208368 tacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaact 28208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 28627973 - 28628032
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| || ||||| ||||||||||||    
T  28627973 tacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcatt 28628032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 31859140 - 31859057
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| | | ||| | |||||||| ||||||||| ||||||||||| ||| |||||| | ||||| |||||||||||||    
T  31859140 ttatctcattaactaaggccggttacatgaatcaaattatgtcatagtgttctattataaattaaatttggatccaactcattg 31859057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 545
Target Start/End: Complemental strand, 35922497 - 35922436
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| ||||||||||||| |||||| |||| |||||||||||||||||  || |||||||||    
T  35922497 gttatatggatcaaattaggtcataatgttctatcataaatcatatttagattcaactcatt 35922436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 545
Target Start/End: Original strand, 40008433 - 40008530
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| | | |||||||||| ||||||||| | |||||||||||||  ||| |||| |||| ||||||| ||||| | |  ||||||||||||    
T  40008433 aacaacaaccaagtcttatctcattaagtgaggtcagctacatggatcaaacaacgacataatgttctatcatatatcatgtctctatccaactcatt 40008530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 44401167 - 44401212
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||    
T  44401167 tacatggatcaaattacgtcataatgttctatcataaaacatattt 44401212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 546
Target Start/End: Original strand, 46355855 - 46355956
Alignment:
Q  445 aaaaacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcat 544  Q
    ||||||||||||| |   |||||||| | |||| |||| | |||||||||||||| | | ||||||||| ||||||| | || ||||| |||||||||||    
T  46355855 aaaaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgatggcatagtgttctatcatacaccagatttggatccaactcat 46355954  T
Q  545 tg 546  Q
    ||    
T  46355955 tg 46355956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 9796369 - 9796289
Alignment:
Q  443 gcaaaaacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaa 523  Q
    |||| |||||||||  ||| ||||| |||| ||||||||| | |||||| ||| |||||||||||| |||||||| |||||    
T  9796369 gcaataacaacaactaaatcttatcccattaagtgaggtcggctacatgaatcgaattacgtcataatgttttattataaa 9796289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 11594202 - 11594142
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  11594202 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 11594142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 12841315 - 12841375
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||||| || ||||| || ||||||||||    
T  12841315 tacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcattg 12841375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 33073171 - 33073111
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| |||||||| |||||||| ||| | || ||||| |||||||||||||    
T  33073171 tacatggatcaaatgacgtcatattgttttattatacaccaaatttggatccaactcattg 33073111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 34869662 - 34869602
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  34869662 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 34869602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 35906241 - 35906301
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  35906241 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 35906301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 38607234 - 38607174
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||  ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  38607234 tacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 38607174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 49029518 - 49029458
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  49029518 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 49029458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 14057720 - 14057661
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||  |||| |||| ||||||||| |||||||||||| ||| ||||    
T  14057720 tacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcatt 14057661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 14367748 - 14367689
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||  |||| |||| ||||||||| |||||||||||| ||| ||||    
T  14367748 tacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcatt 14367689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 30814165 - 30814220
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    ||||||||||||||||||| ||| |||| ||||||||| |||||||  ||||||||    
T  30814165 tacatggatcaaattacgtgataatgttctatcataaaacatatttcgatccaact 30814220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 545
Target Start/End: Original strand, 34341443 - 34341494
Alignment:
Q  494 tcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| |||| |||| ||||||||| ||||||| |||||||||||||    
T  34341443 tcaaattacgccataatgttctatcataaaccatatttcaatccaactcatt 34341494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 528
Target Start/End: Complemental strand, 48515517 - 48515475
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcata 528  Q
    |||| ||||||||||||||||||||||  ||||||||||||||    
T  48515517 tacacggatcaaattacgtcatagtgtactatcataaatcata 48515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 26332913 - 26332958
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||||||||||||||||||||| | || ||||||||| |||||||    
T  26332913 tacatggatcaaattacgtcataatattctatcataaaccatattt 26332958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 26741932 - 26741993
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||||||   |||||||||||    
T  26741932 gttacattgatcaaattacgccataatgttctatcataaaccatatttcggtccaactcatt 26741993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 44855214 - 44855272
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| ||||||||| |||||||||  |||||||| || ||||| |||||||||||||    
T  44855214 tacatggaccaaattacgccatagtgtt--atcataaaccaaatttggatccaactcattg 44855272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 21078159 - 21078099
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| |||| |||| ||||||| | || ||||| |||||||||||||    
T  21078159 tacatggatcaaatgacgccataatgttctatcatacaccaaatttggatccaactcattg 21078099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 545
Target Start/End: Original strand, 24434402 - 24434462
Alignment:
Q  485 ttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| ||||||||||||| ||||| || | |||| |||||||||||||| ||||| |||||    
T  24434402 ttacttggatcaaattacatcataatgctgtatcttaaatcatatttgagtccaattcatt 24434462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 544
Target Start/End: Original strand, 28545932 - 28545968
Alignment:
Q  508 agtgttttatcataaatcatatttgaatccaactcat 544  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  28545932 agtgttttatcataaatcacatttgaatcaaactcat 28545968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 29650626 - 29650566
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| | ||||||| ||||| ||| |||||||| ||| |||||||||    
T  29650626 tacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcattg 29650566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 31682642 - 31682702
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||||| || || || |||||| ||||||    
T  31682642 tacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcattg 31682702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 32631806 - 32631746
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||| ||| ||||| ||| ||||| ||| |||||||| |||||||||||||    
T  32631806 tacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcattg 32631746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 36652234 - 36652174
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| || ||||||||||    
T  36652234 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggattcaactcattg 36652174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 38900199 - 38900139
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| |||||||||  |||||| | || ||||| |||||||||||||    
T  38900199 tacatggatcaaatgacgccatagtgttcaatcatacaccaaatttggatccaactcattg 38900139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 39906412 - 39906472
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||| ||||||    
T  39906412 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcattg 39906472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 529
Target Start/End: Complemental strand, 45903957 - 45903913
Alignment:
Q  485 ttacatggatcaaattacgtcatagtgttttatcataaatcatat 529  Q
    |||||| |||||||||||| ||||||||| ||||||||| |||||    
T  45903957 ttacattgatcaaattacgccatagtgttctatcataaaccatat 45903913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 546
Target Start/End: Complemental strand, 30031510 - 30031438
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| | |||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||    
T  30031510 agtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattg 30031438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 5081082 - 5081022
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||    
T  5081082 tacatggatcaaatgacgttatagtgttctatcataaatcatatttgtatccaactcattg 5081022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 546
Target Start/End: Complemental strand, 33497203 - 33497141
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| |||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||    
T  33497203 gttatatggatcaaattacgctatagtgttatatcataaatcatatttggatccaactcattg 33497141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 545
Target Start/End: Original strand, 34507 - 34604
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| | | ||||| || | |||| |||| | |||||||||||||||||| |||| |||| ||||||||| ||||||| |||||||||||||    
T  34507 aacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcatt 34604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 485 - 546
Target Start/End: Complemental strand, 5632065 - 5632004
Alignment:
Q  485 ttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||| ||||||||||||| ||||| ||| |||||||| |||||||||||||    
T  5632065 ttacatggatcaaatgacgtcatagtgttatatcaaaaaccatatttggatccaactcattg 5632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 12890817 - 12890757
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||| ||| |||||||||    
T  12890817 tacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcattg 12890757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 21351854 - 21351937
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| | | ||||||| | |||||||||||| | ||||||||||||| ||||| |||||||||||| ||||| |||||||    
T  21351854 ttatctcactaactgaggtcggctacatggatcaattaacgtcatagtgttctatcaaaaatcatatttggatccagctcattg 21351937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 608403 - 608343
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| |||||||||| || ||||| ||| |||||||| |||||||||||||    
T  608403 tacatggatcaaatgacgtcatagtattctatcaaaaaccatatttggatccaactcattg 608343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 3206499 - 3206559
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||| | ||| |||||||| |||||||||||||    
T  3206499 tacatggatcaaatgacgccatagtgttctattaaaaaccatatttggatccaactcattg 3206559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 31819073 - 31819013
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  31819073 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 31819013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 542
Target Start/End: Complemental strand, 32080711 - 32080655
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactc 542  Q
    |||||| ||||||||||| |||| |||| |||||||||||||| || ||||||||||    
T  32080711 tacatgtatcaaattacgccataatgttatatcataaatcataatttaatccaactc 32080655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 32756163 - 32756103
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  32756163 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 32756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 34143805 - 34143865
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  34143805 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 34143865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 34156421 - 34156481
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  34156421 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 34156481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 35043481 - 35043541
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||| ||||||||||||| ||||| ||| |||||||| ||||||| |||||    
T  35043481 tacattgatcaaatgacgtcatagtgttctatcaaaaaccatatttggatccaacacattg 35043541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 3210548 - 3210607
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||  |||| |||| |||||||| ||||||||  ||||||||||||    
T  3210548 tacatggatcaaattacaccataatgttctatcataactcatatttccatccaactcatt 3210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 5096076 - 5096017
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||| |||||||||||| |||| |||| ||||||||| |||||||  ||||||||||||    
T  5096076 tacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcatt 5096017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 9707012 - 9706953
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||| | | ||||||||| ||||| ||| |||||||| ||||||||||||    
T  9707012 tacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcatt 9706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 31818773 - 31818714
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||| ||  ||||||||||||    
T  31818773 tacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcatt 31818714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 546
Target Start/End: Original strand, 10098935 - 10098994
Alignment:
Q  485 ttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||| ||||  ||||||| ||||||| | ||||||| ||||||||||||||    
T  10098935 ttacatggatcaaatgacgt--tagtgttctatcatacaccatatttaaatccaactcattg 10098994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 536
Target Start/End: Original strand, 12119683 - 12119733
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatc 536  Q
    |||||||||||||| |||||||| |||| ||| | ||||||||||||||||    
T  12119683 tacatggatcaaatgacgtcataatgttctattaaaaatcatatttgaatc 12119733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 546
Target Start/End: Complemental strand, 24666047 - 24665993
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| |||||| |||| ||||||||| |||||||  |||||||||||||    
T  24666047 gatcaaattaagtcataatgttctatcataaaccatatttcgatccaactcattg 24665993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Original strand, 1615253 - 1615298
Alignment:
Q  476 tgaggtctgttacatggatcaaattacgtcatagtgttttatcata 521  Q
    ||||||| | |||||||||||||| ||||||||||||| |||||||    
T  1615253 tgaggtcggctacatggatcaaatgacgtcatagtgttctatcata 1615298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 7513030 - 7513075
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||| ||||||||||||||||| |||| ||||||||| |||||||    
T  7513030 tacatagatcaaattacgtcataatgttctatcataaaccatattt 7513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 28085618 - 28085558
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||  ||||||||| ||||||| | || ||||| |||||||||||||    
T  28085618 tacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcattg 28085558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 32097979 - 32097927
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatcca 538  Q
    |||||| ||||| ||||| |||| |||| ||||||||||||||||| ||||||    
T  32097979 tacatgtatcaatttacgccataatgttatatcataaatcatattttaatcca 32097927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 34934870 - 34934930
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| | | ||||||||| ||||||| | || ||||| |||||||||||||    
T  34934870 tacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactcattg 34934930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 48508477 - 48508417
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  48508477 tacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattg 48508417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 48953459 - 48953519
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  48953459 tacatggattaaattacgtcatagtgttctatcataaatcatatttggatccaactcattg 48953519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 448 - 546
Target Start/End: Complemental strand, 38060994 - 38060896
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| | | ||||| || | |||| |||| | |||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||||||||||    
T  38060994 aacaacaaccaattcttatcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcattg 38060896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 38850363 - 38850303
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||||| ||| ||||||    
T  38850363 tacatggatcaaattacgtcatagtgttctatcataaaccaaatttgaattcaattcattg 38850303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 29601134 - 29601075
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||| ||||| |||| |||||||||  ||||||||||||||||||||    
T  29601134 tacatggatcaaattacatcataatgttctatcataaactatatttgaatccaactcatt 29601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 39208850 - 39208791
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||| |||| |||||||    
T  39208850 tacatggatcaaattacgtcataatgttctatcataaaccatatttggatcctactcatt 39208791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 53519845 - 53519762
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| | |||| |||| | |||||||||||||| ||||||||||||| ||||| ||| | |||||| |||||||||||||    
T  53519845 ttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcattg 53519762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 546
Target Start/End: Complemental strand, 35033398 - 35033328
Alignment:
Q  476 tgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||| | |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  35033398 tgaggtcggctacatggatcaaataacgccatagtgttctatcaaaaaccatatttggatccaactcattg 35033328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 448 - 546
Target Start/End: Original strand, 52156086 - 52156184
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||   ||||| || | |||| |||| | ||||||||||| || ||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  52156086 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcattg 52156184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 54365002 - 54365060
Alignment:
Q  473 tagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||| |||| | |||||||||||||||||||||||||||| ||||||||| |||||||    
T  54365002 tagtgtggtcggctacatggatcaaattacgtcatagtgttctatcataaaccatattt 54365060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 5169074 - 5169014
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  5169074 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 5169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 49042179 - 49042119
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcat-aaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||||||||||    
T  49042179 tacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcatt 49042119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 52139042 - 52138982
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  52139042 tacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcattg 52138982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 23534610 - 23534669
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||  | |||||||||||    
T  23534610 tacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcatt 23534669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 40106660 - 40106719
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||| |||||||||| |||||| |||| ||||||||| |||||||| ||||||||||||    
T  40106660 tacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcatt 40106719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 4472427 - 4472481
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaac 540  Q
    |||||||||||| ||||  ||||||||| ||| ||||||||||||||||||||||    
T  4472427 tacatggatcaagttacaccatagtgttctattataaatcatatttgaatccaac 4472481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 48712115 - 48712173
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcat 544  Q
    ||||||||| |||| | |||||| |||| ||||||||| ||||||||||||||||||||    
T  48712115 tacatggatgaaataatgtcataatgttatatcataaaccatatttgaatccaactcat 48712173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 545
Target Start/End: Complemental strand, 36304246 - 36304149
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||   || || |||| |||| |||| | |||||||||||||||||| |||| |||  ||||||||| |||||||  ||||||||||||    
T  36304246 aacaacaaccgagccttgtcacattgagtggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcatt 36304149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 22314 - 22254
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  22314 tacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 22254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 2133652 - 2133712
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| |||||||||  ||||||| || ||||||||||    
T  2133652 tacatggatcaaatcacgccatagtgttctatcataaactatatttggattcaactcattg 2133712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 12096745 - 12096805
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  12096745 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 12096805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 28245679 - 28245619
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||| ||| | || ||||| |||||||||||||    
T  28245679 tacatggatcaaatgacgtcatagtgttctattatacaccaaatttggatccaactcattg 28245619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 47555372 - 47555432
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  47555372 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 47555432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 53262383 - 53262323
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  53262383 tacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 53262323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 54128621 - 54128561
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||| | |||| |||| ||||||||| ||||||||  ||||||||||||    
T  54128621 tacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattg 54128561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 30797850 - 30797917
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||| |||| ||||||| ||||||||||||||||| |||| |||||||||  | ||||| ||||||||    
T  30797850 agtggggtcggttacatagatcaaattacgtcataatgttctatcataaactaaatttggatccaact 30797917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 32170670 - 32170592
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||| | |||| |||| | |||||||||||||||| |||||| |||| ||||||| | |||||||  ||||||||    
T  32170670 ttatctcactaagtggggtcggctacatggatcaaattatgtcataatgttatatcatagaccatatttctatccaact 32170592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 40991696 - 40991614
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||| | |||| |||| | |||||||||||||||||  |||| |||| ||||||||| |||||||   |||||||||||    
T  40991696 ttatctcactaagtggggtcagctacatggatcaaattacaccataatgttctatcataaaccatattttggtccaactcatt 40991614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 45289132 - 45289190
Alignment:
Q  487 acatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||| |  ||| |||| ||||||||| |||||||| ||||||||||||    
T  45289132 acatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcatt 45289190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 546
Target Start/End: Original strand, 30294180 - 30294221
Alignment:
Q  505 catagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||||||||| ||  |||||||||||||    
T  30294180 catagtgttttatcataaatcatacttagatccaactcattg 30294221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 49888429 - 49888373
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||||||||| ||||   ||||||| ||||||| | |||||||||||    
T  49888429 tacatggatcaaattacgtcataatgtt---tcataaaccatatttcagtccaactcatt 49888373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 52678892 - 52678949
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||  ||| | || |||||| |||||||||||||| |||||||||    
T  52678892 catggatcaaattacgctataatattatatcatgaatcatatttgaattcaactcatt 52678949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 29475925 - 29475869
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||||||||| |||||| || |||||||||  |||||| |||||||||||||    
T  29475925 atgggtcaaattacgccatagttttctatcataaacaatatttcaatccaactcatt 29475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 40116369 - 40116437
Alignment:
Q  477 gaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||| | ||| |||||||||||||| |||| |||| ||||||||| |||||||   |||||||||||    
T  40116369 gaggtcggctacgtggatcaaattacgccataatgttctatcataaaccatatttcggtccaactcatt 40116437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 51447757 - 51447817
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| ||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  51447757 tacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 51447817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 54279262 - 54279202
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  54279262 tacattgatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 54279202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 14825 - 14765
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||    
T  14825 tacatggatcaaattacgccatagtgttcaatcataaaccatatttgaatccaactcattg 14765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 546
Target Start/End: Complemental strand, 31959775 - 31959703
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| |||||| |||||||||||||||| | ||||||||| ||||||||| |||||||| |||||||||||||    
T  31959775 agtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcattg 31959703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 45367666 - 45367724
Alignment:
Q  487 acatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||||    
T  45367666 acatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcatt 45367724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 12734942 - 12734882
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||  ||||||||| ||||||||| |||||||| |||||||||||||    
T  12734942 tacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcattg 12734882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 2610853 - 2610770
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| | |||| |||| |||||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  2610853 ttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattg 2610770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 9496108 - 9496049
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||| ||||||||||||    
T  9496108 tacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatt 9496049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 38430149 - 38430066
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| | |||| |||| | |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  38430149 ttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 38430066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 41545672 - 41545589
Alignment:
Q  461 tattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcat 544  Q
    |||||||||||| |||||| || | || ||  ||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||    
T  41545672 tattatctcattaagtgagatcggctaaataaatcaaattaagtcatagtgttctatcataaaccatatttgaattcaactcat 41545589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 3635363 - 3635423
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  3635363 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 3635423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 9996666 - 9996722
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactc 542  Q
    |||||||||||||||| | |||||||||| |||||||| |||||||| |||||||||    
T  9996666 tacatggatcaaattatgccatagtgtttaatcataaaccatatttggatccaactc 9996722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 530
Target Start/End: Original strand, 12520102 - 12520146
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatt 530  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  12520102 tacatggatcaaattacgccatagtgttttatcataaaccatatt 12520146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 23997844 - 23997784
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| ||||||| ||| ||||||||||||||| ||| |||||||| |||||||||||||    
T  23997844 tacatgaatcaaataacgccatagtgttttatcaaaaaccatatttggatccaactcattg 23997784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 25834920 - 25834860
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| || |||||| ||||||||| |||||||| |||||||||||||    
T  25834920 tacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcattg 25834860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 28508920 - 28508860
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||||| || ||||| |||||||||||||    
T  28508920 tacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattg 28508860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 19336933 - 19336992
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||  ||||||||||||    
T  19336933 tacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcatt 19336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 43573170 - 43573229
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| ||||  |||  ||||||||||||||||| ||||||||||||    
T  43573170 tacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcatt 43573229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 30306274 - 30306217
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactca 543  Q
    |||||||||||||| ||| ||||||||| ||||||||| || ||||| ||||||||||    
T  30306274 tacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactca 30306217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 543
Target Start/End: Original strand, 39709241 - 39709298
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactca 543  Q
    |||||||||||||||||| |||||||||  |||||||| |||||||  ||||||||||    
T  39709241 tacatggatcaaattacgccatagtgttcaatcataaaccatattttgatccaactca 39709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 227431 - 227371
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  227431 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 227371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 3866314 - 3866254
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| | ||||||||||| ||||||| | || ||||| |||||||||||||    
T  3866314 tacatggatcaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattg 3866254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 7326200 - 7326260
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  7326200 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 7326260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 11992148 - 11992208
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| |||| |||| ||||| |||||||||||| ||| |||||||||    
T  11992148 tacatggatcaaataacgccataatgttctatcaaaaatcatatttggatctaactcattg 11992208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 530
Target Start/End: Original strand, 18424417 - 18424461
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatt 530  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||    
T  18424417 tacatggatcaaatgacgtcatagtgttctatcataaaccatatt 18424461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 39029823 - 39029763
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| |||| |||| ||||| ||| |||||||| |||||||||||||    
T  39029823 tacatggatcaaatgacgccataatgttctatcaaaaaccatatttggatccaactcattg 39029763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 12882085 - 12882144
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| || | |||| ||||| ||| |||||||| ||||||||||||    
T  12882085 tacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcatt 12882144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 528
Target Start/End: Original strand, 10516789 - 10516831
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcata 528  Q
    |||||||||||||||||| |||| | |||||||||||||||||    
T  10516789 tacatggatcaaattacgccataatattttatcataaatcata 10516831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 35755287 - 35755344
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||| || | |||| ||||||||| |||||||| ||||||| ||||    
T  35755287 catggatcaaattacggcacaatgttctatcataaaccatatttggatccaacccatt 35755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 528
Target Start/End: Original strand, 23915735 - 23915775
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcata 528  Q
    |||||||||||||||| ||||||||| ||||||||| ||||    
T  23915735 catggatcaaattacgccatagtgttctatcataaaccata 23915775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 33504463 - 33504411
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    ||||||||||||||| |||| |||| ||||||| | ||||||| |||||||||    
T  33504463 atggatcaaattacgccataatgttctatcatataccatatttcaatccaact 33504411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 36183693 - 36183633
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||  |  ||||||||| ||||||| |||| ||||| |||||||||||||    
T  36183693 tacatggatcaaatggcaccatagtgttctatcatacatcaaatttggatccaactcattg 36183633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 38452726 - 38452786
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| ||| ||  ||||||||||||||||| | || ||||| |||||||||||||    
T  38452726 tacatggatcgaatgacaccatagtgttttatcatacaccaaatttggatccaactcattg 38452786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 15086164 - 15086104
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||    
T  15086164 tacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcattg 15086104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 39318371 - 39318311
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  39318371 tacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattg 39318311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 448 - 544
Target Start/End: Original strand, 10200308 - 10200404
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcat 544  Q
    |||||||||| |  |||||| |||| ||||||||| | |||||||||||||||||  |||  |||| ||||||||| |||||||| |||||||||||    
T  10200308 aacaacaaccaagcattatcccattaagtgaggtcggctacatggatcaaattacaccatgatgttctatcataaaccatatttggatccaactcat 10200404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 25979271 - 25979331
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  25979271 tacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattg 25979331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 22090361 - 22090278
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| || |||||| |||| | |||||||||||||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  22090361 ttatcccacttagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 22090278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 34792366 - 34792449
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||| |||| |||| | |||||||||||||| ||| ||||||||| ||||||||| || ||||| |||||||||||||    
T  34792366 ttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattg 34792449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 546
Target Start/End: Original strand, 24020309 - 24020367
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||| |||||||||||||    
T  24020309 catggatcaaatgacgccatagtgttctatcataaatcaaatttggatccaactcattg 24020367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 545
Target Start/End: Complemental strand, 5338993 - 5338896
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||   |||||||| | ||||||||  | |||||||||||||||||| |||| |||| ||| |||||||| ||||  ||||||||||||    
T  5338993 aacaacaaccgagccttatctcactaagtgaggttggctacatggatcaaattacgccataatgttctataataaatcacatttcgatccaactcatt 5338896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 543
Target Start/End: Original strand, 12930351 - 12930408
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactca 543  Q
    |||| |||||||||||||||||| | || |||||||||||||||||| ||||||||||    
T  12930351 tacacggatcaaattacgtcataatcttctatcataaatcatatttggatccaactca 12930408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 27520230 - 27520306
Alignment:
Q  469 catttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||||||||   |||||| |||||||||| ||||| |||| |||||||||||||||||| ||||| ||||||    
T  27520230 cattaagtgaggtcgactacatgaatcaaattacatcataatgttctatcataaatcatatttggatccagctcatt 27520306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 37311795 - 37311855
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  37311795 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 37311855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 6084217 - 6084158
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||  ||||||||||||    
T  6084217 tacatggatcaaattacgccatattgttctatcataaaccatattttgatccaactcatt 6084158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 41560471 - 41560412
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||  |||||||| ||||||||||||    
T  41560471 tacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcatt 41560412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 52900682 - 52900741
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||| | |||||||||||    
T  52900682 tacatggatcaaattccgccatagtgttctatcataaaccatatttcagtccaactcatt 52900741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 538
Target Start/End: Original strand, 28090696 - 28090786
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatcca 538  Q
    |||||||||| | | ||||| || | |||| |||| | |||||||||||||||||| |||| |||| ||||||||| |||||||| |||||    
T  28090696 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 4707266 - 4707319
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||| ||||||||| ||||||||| || ||||| ||||||||||||    
T  4707266 gatcaaattacgccatagtgttctatcataaaccaaatttggatccaactcatt 4707319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 1210987 - 1210927
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  1210987 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 1210927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 4001495 - 4001555
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| | ||||||| ||| ||||| ||| |||||||| |||||||||||||    
T  4001495 tacatggatcaaatgatgtcatagggttctatcaaaaaccatatttggatccaactcattg 4001555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 8392014 - 8391954
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| |||||| || ||||| |||||||||||| |||||||| ||||    
T  8392014 tacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaacttattg 8391954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 11331247 - 11331299
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||||||||| ||||| ||||| |||||||| ||||||| |||||||||    
T  11331247 atggatcaaattacatcataatgtttcatcataaaccatatttaaatccaact 11331299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 11489268 - 11489320
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||||||||| ||||| ||||| |||||||| ||||||| |||||||||    
T  11489268 atggatcaaattacatcataatgtttcatcataaaccatatttaaatccaact 11489320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 30202170 - 30202230
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  30202170 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 30202230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 40568450 - 40568510
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| |||||| || ||||||||| |||||||   ||||||||||||    
T  40568450 tacatggatcaaattacgccatagttttctatcataaaccatattttggtccaactcattg 40568510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 546
Target Start/End: Original strand, 43240407 - 43240479
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| | |||||| ||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  43240407 agtgaggtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 43240479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 49347433 - 49347493
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  49347433 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 49347493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 52921322 - 52921262
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| |||  |||||||| ||||||||| |||||||| |||||| ||||||    
T  52921322 tacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcattg 52921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 531
Target Start/End: Original strand, 5038783 - 5038830
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  5038783 gttacatggctcaaattacgtgatagtgttatatcataaaccatattt 5038830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 532
Target Start/End: Complemental strand, 19822131 - 19822084
Alignment:
Q  485 ttacatggatcaaattacgtcatagtgttttatcataaatcatatttg 532  Q
    ||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  19822131 ttacatggatcaaattacgtcgtaatgttctatcataaaccatatttg 19822084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 19908075 - 19908134
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||| ||||||||  ||| ||||  |||||||| |||||||||||||||||||||    
T  19908075 tacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcatt 19908134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 31979646 - 31979701
Alignment:
Q  490 tggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||| |||| ||||||  ||||||||||||| |||||||||||||| ||||||    
T  31979646 tggatcagattatgtcataacgttttatcataaaccatatttgaatccagctcatt 31979701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 34444598 - 34444539
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||| |||||||||||  |||| |||||||| ||||| |||||||| ||||||||||||    
T  34444598 tacatagatcaaattacaccataatgttttattataaaccatatttggatccaactcatt 34444539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 546
Target Start/End: Complemental strand, 4029402 - 4029304
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| | | ||||| || | |||| |||| | ||||||||||||||  || ||||||||| ||||||| | || ||||| |||||||||||||    
T  4029402 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatgtcgccatagtgttatatcatacaccaaatttggatccaactcattg 4029304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 522
Target Start/End: Complemental strand, 28533747 - 28533673
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataa 522  Q
    |||||||||| | | ||||| || | |||| |||| | |||||||||||||| ||||||||||||| ||||||||    
T  28533747 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcataa 28533673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 39776936 - 39776994
Alignment:
Q  487 acatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||||||||||| ||| ||||| ||||||||| |||||||  ||||||||||||    
T  39776936 acattgatcaaattacgccattgtgttctatcataaaccatatttcgatccaactcatt 39776994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 532
Target Start/End: Original strand, 44941816 - 44941862
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttg 532  Q
    |||||||||||||||||| ||||||||| ||||||||| || |||||    
T  44941816 tacatggatcaaattacgccatagtgttctatcataaaccaaatttg 44941862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 545
Target Start/End: Complemental strand, 50806916 - 50806850
Alignment:
Q  479 ggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||||||| ||||||  ||| ||||||||||||||||||| |||||||  ||||||| ||||    
T  50806916 ggtcggttacatgaatcaaacaacgccatagtgttttatcataaaccatatttttatccaacgcatt 50806850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 546
Target Start/End: Original strand, 51440767 - 51440865
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| | | ||||| || | |||| |||| |||||||| ||||||| ||| | ||||||| ||||||| | || ||||| |||||||||||||    
T  51440767 aacaacaaccaagtcttatcccactaagtggggtcggttacatgaatcaaatgacgccgtagtgttctatcatacaccaaatttggatccaactcattg 51440865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 531
Target Start/End: Original strand, 25715354 - 25715411
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||||||| | |||||||||||||||||| |||| | || ||||||||| |||||||    
T  25715354 agtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatattt 25715411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 27072527 - 27072572
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||    
T  27072527 tacatggatcaaattacgccataatgttctatcataaaccatattt 27072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 32082796 - 32082857
Alignment:
Q  486 tacatggatcaaattac-gtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| || | | ||||||| ||||| ||| ||||||||||||||||||||||    
T  32082796 tacatggatcaaatgactgccgtagtgttctatcaaaaaccatatttgaatccaactcattg 32082857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 86649 - 86703
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaac 540  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  86649 tacatggatcaaattacgtcatagtgttctatcatacatcatatttggatccaac 86703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 25300341 - 25300281
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||    
T  25300341 tacatagatcaaattatgtcatagtgttatatcataaaccatatttggatccaactcattg 25300281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 30559936 - 30559876
Alignment:
Q  485 ttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||    
T  30559936 ttacatggatcaaattacgtcataatgttctatcataaaccatatatggatccaactcatt 30559876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 29520891 - 29520832
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||| ||||||||||||    
T  29520891 tacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatt 29520832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 544
Target Start/End: Complemental strand, 490577 - 490519
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcat 544  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||| |||||||||||    
T  490577 tacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcat 490519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 545
Target Start/End: Original strand, 35914603 - 35914700
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| | | |||||||| | |||| |||| | |||||||||||||||||| |||| |||| ||||||||| |||||||   |||||||||||    
T  35914603 aacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcatt 35914700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 36545391 - 36545331
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  36545391 tacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 36545331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 42469767 - 42469827
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  42469767 tacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 42469827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 42854044 - 42854104
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  42854044 tacatggatcaaatgacgccatagtgttatatcaaaaaccatatttggatccaactcattg 42854104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 546
Target Start/End: Original strand, 36565238 - 36565341
Alignment:
Q  443 gcaaaaacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactc 542  Q
    |||| ||||||||||||   ||||| || | |||| |||| | |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||    
T  36565238 gcaacaacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactc 36565337  T
Q  543 attg 546  Q
    ||||    
T  36565338 attg 36565341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 43904705 - 43904764
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||  ||||||||||||    
T  43904705 tacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcatt 43904764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 546
Target Start/End: Complemental strand, 21121382 - 21121328
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||| ||||||||| ||||||||| |||||| | |||||||||||||    
T  21121382 gatcaaattacgccatagtgttctatcataaaccatattaggatccaactcattg 21121328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 545
Target Start/End: Complemental strand, 21425295 - 21425229
Alignment:
Q  479 ggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||| |||||||||||||||| | |||| || | |||||||||||||||||  ||||||||||||    
T  21425295 ggtctgctacatggatcaaattatgccataatggtctatcataaatcatatttcgatccaactcatt 21425229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 546
Target Start/End: Complemental strand, 25289000 - 25288946
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||| ||||||| ||| ||||||||| |||||||| |||||||||||||    
T  25289000 gatcaaattatgtcatagagttatatcataaaccatatttggatccaactcattg 25288946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 545
Target Start/End: Complemental strand, 4955471 - 4955374
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| ||  |||||||| | |||||| ||   |||||  ||||||||||||| || |||||||| ||||||||||||| |||| ||||||||    
T  4955471 aacaacaaccaaaccttatctcactaagtgagatcgactacataaatcaaattacgtcgtaatgttttattataaatcatatttaaatcaaactcatt 4955374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 545
Target Start/End: Complemental strand, 28169636 - 28169575
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||||| |||||||  |||| | |||||||||||| |||||||||||||||||||||    
T  28169636 gttatatggataaaattacaccataatattttatcataaaccatatttgaatccaactcatt 28169575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 42584595 - 42584542
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||| |||| ||||||||| |||||||| |||||| |||||    
T  42584595 gatcaaattacgtcataatgttctatcataaaccatatttggatccaaatcatt 42584542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 11523763 - 11523823
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  11523763 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 11523823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 12491178 - 12491238
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  12491178 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 12491238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 44047572 - 44047632
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||| ||||| ||||||||| || ||||| |||||||||||||    
T  44047572 tacatggatcaaatgacgccatggtgttctatcataaaccaaatttggatccaactcattg 44047632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 44529467 - 44529407
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| | | ||||||||| ||||||||| || ||||| |||||||||||||    
T  44529467 tacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactcattg 44529407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 546
Target Start/End: Complemental strand, 2027767 - 2027712
Alignment:
Q  491 ggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||  |||||||||||| ||||||||| |||||||||||  |||||||||    
T  2027767 ggatcaaatggcgtcatagtgttctatcataaaccatatttgaatataactcattg 2027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 8932945 - 8932886
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||| ||| ||||||||||||||| ||  |||||||  ||||||||||||    
T  8932945 tacatggatcaaatgacgccatagtgttttatcaaaagccatattttgatccaactcatt 8932886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 28299999 - 28300058
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||| | || ||||||||| |||||||||||||||||| |||  ||||||||||||    
T  28299999 tacatggaccgaaatacgtcatattgttttatcataaatcatgtttagatccaactcatt 28300058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 31716062 - 31716007
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||||||||||||| |||| |||| |||| |||| |||||||| ||||||||    
T  31716062 tacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaact 31716007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 23492299 - 23492217
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||| | |||| |||| | ||||||||| |||| ||  ||||||||| ||||||| |||||||||  ||||||||||||    
T  23492299 ttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcatt 23492217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 28269713 - 28269778
Alignment:
Q  479 ggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||||||||||||||||| ||||||  ||| |||||| ||| | ||||| ||||||||||||    
T  28269713 ggtctgttacatggatcaaattatgtcataacgttatatcat-aattaaatttggatccaactcatt 28269778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 7615629 - 7615690
Alignment:
Q  484 gttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||| ||||||||||| ||||| | ||||||||||||  ||||||  ||||||||||||    
T  7615629 gttacatcgatcaaattacatcataatattttatcataaactatatttcgatccaactcatt 7615690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 546
Target Start/End: Complemental strand, 18125395 - 18125354
Alignment:
Q  505 catagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| || |||||||||||||||||| |||||||||||||    
T  18125395 catagtattctatcataaatcatatttggatccaactcattg 18125354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 30689977 - 30689940
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaa 523  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  30689977 tacatggatcaaattacgtcataatgttatatcataaa 30689940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 35362692 - 35362749
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||| |||| |||| ||||||| | ||||||| | |||||||||||    
T  35362692 catggatcaaattacgccataatgttctatcatacaccatatttcagtccaactcatt 35362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 10728755 - 10728799
Alignment:
Q  487 acatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    |||| |||||||||| ||||||||||||||||||| || ||||||    
T  10728755 acatagatcaaattatgtcatagtgttttatcatatattatattt 10728799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 546
Target Start/End: Complemental strand, 12026029 - 12025959
Alignment:
Q  479 ggtctgttacatggatcaaattacg---tcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||||| |||||||| ||||    
T  12026029 ggtcggttacatggatcaaatgacgacgtcatagtgttctatcaaaaaccatatttggatccaacttattg 12025959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 15215452 - 15215512
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||| || ||||||||||||| ||| | ||| |||||||| ||| |||||||||    
T  15215452 tacatggatcatatgacgtcatagtgttctattaaaaaccatatttggatcaaactcattg 15215512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 519
Target Start/End: Complemental strand, 36042487 - 36042407
Alignment:
Q  439 aacggcaaaaacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatca 519  Q
    |||| ||| |||||||||| ||| || || |||| | || |||| | |||||||||||||| ||||||||||||| |||||    
T  36042487 aacgacaacaacaacaaccaaatcttttcccattaattggggtccgctacatggatcaaatgacgtcatagtgttctatca 36042407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 448 - 545
Target Start/End: Complemental strand, 14911452 - 14911355
Alignment:
Q  448 aacaacaaccgaatattatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||| ||  ||||  |||| |||| |||| | |||||||||||||| ||| |||||| || ||||| |||||||||||| ||||||||||||    
T  14911452 aacaacaaccaaaccttattccattaagtggggtcggctacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaactcatt 14911355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 5558383 - 5558323
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||| | ||||||||| ||||||||| |||||||| |||| ||||||||    
T  5558383 tacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactcattg 5558323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 20367132 - 20367076
Alignment:
Q  489 atggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||||||||||    
T  20367132 atggatcaaattacgtcataatgttatgtcataaaccatatttggatccaactcatt 20367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 38685209 - 38685149
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| |||| |||| ||||||||| |||||||| |||||||||||||    
T  38685209 tacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattg 38685149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 418074 - 418133
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||||||| || ||||| ||||||||||||    
T  418074 tacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcatt 418133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 545
Target Start/End: Complemental strand, 6788321 - 6788250
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    ||||||||| | |||||| |||||||||||  ||| |||| ||||||||||||||||| | |||||||||||    
T  6788321 agtgaggtcggctacatgaatcaaattacgctataatgttctatcataaatcatatttcagtccaactcatt 6788250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 545
Target Start/End: Complemental strand, 14668025 - 14667954
Alignment:
Q  474 agtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||| |||| |||||||||||||||||||  |||| |||| ||||||||| |||| ||| ||||||||||||    
T  14668025 agtggggtcggttacatggatcaaattacaccataatgttctatcataaaccatacttggatccaactcatt 14667954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 546
Target Start/End: Complemental strand, 34273278 - 34273195
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||| | ||||||||  | |||||||||| ||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  34273278 ttatctcactaagtgaggttggctacatggatcgaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 34273195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 32516819 - 32516742
Alignment:
Q  463 ttatctcatttagtgaggtctgttacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||||| |||| | || |||| || ||||||||||||||||| | || ||||||||| |||||||||||||||||    
T  32516819 ttatctcattaagtg-gatcggttatatcgatcaaattacgtcataatattctatcataaaccatatttgaatccaact 32516742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 26884729 - 26884774
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||    
T  26884729 tacatggatcaaattgcgtcgtagtgttctatcataaatcatattt 26884774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 3302086 - 3302026
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| | ||||||| ||||| ||| |||||||| |||||||||||||    
T  3302086 tacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcattg 3302026  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 10639544 - 10639484
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  10639544 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 10639484  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 13561426 - 13561486
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||| ||| |||| ||| |||||||||||||    
T  13561426 tacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcattg 13561486  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 16913923 - 16913983
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||| ||||| |||| |||| |||||||| |||||||||||||    
T  16913923 tacatggatcaaatgacgccatggtgttctatcgtaaaccatatttggatccaactcattg 16913983  T

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Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 28276480 - 28276420
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||  |||||| || |||||||||  |||||||||||||||| ||||    
T  28276480 tacatggatcaaattacaccatagttttctatcataaacaatatttgaatccaacttattg 28276420  T

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Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 29816624 - 29816564
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  29816624 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 29816564  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 30213817 - 30213757
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  30213817 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 30213757  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 28124 - 28069
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||| ||||||||| | ||||||||| ||||| |||||||||||| ||||||||    
T  28124 tacatgtatcaaattatgccatagtgttctatcagaaatcatatttggatccaact 28069  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 32442165 - 32442224
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcatt 545  Q
    |||||||||||||||||| |||| |||| ||||  ||| |||||||| ||||||||||||    
T  32442165 tacatggatcaaattacgccataatgttctatccaaaaccatatttggatccaactcatt 32442224  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 546
Target Start/End: Original strand, 42504293 - 42504347
Alignment:
Q  492 gatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||||||||||| |||| ||||||||| |||||||| ||  |||||||||    
T  42504293 gatcaaattacgtcataatgttctatcataaaccatatttggatataactcattg 42504347  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 531
Target Start/End: Original strand, 7640547 - 7640592
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatattt 531  Q
    |||||||||||||||||| | ||||||| ||||||||| |||||||    
T  7640547 tacatggatcaaattacgccgtagtgttctatcataaaccatattt 7640592  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 2915536 - 2915595
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| |||||| || || ||||| |||||||||||||    
T  2915536 tacatggatcaaatgacgccatagtgttctatcat-aaccaaatttggatccaactcattg 2915595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 4496626 - 4496566
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| | | ||||||||| ||||||| | || ||||| |||||||||||||    
T  4496626 tacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactcattg 4496566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 12492424 - 12492484
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| ||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  12492424 tacatgcatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 12492484  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 28976899 - 28976959
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||| ||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  28976899 tacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 28976959  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 7680 - 7627
Alignment:
Q  488 catggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaact 541  Q
    |||||||||||||||| ||||||||| |||| | || |||||||||||||||||    
T  7680 catggatcaaattacgccatagtgttctatcgtgaaccatatttgaatccaact 7627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 4878 - 4818
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||| ||||||||||||| ||||||||| ||||||||| |||||||| ||  |||||||||    
T  4878 tacacggatcaaattacgccatagtgttctatcataaaccatatttggatttaactcattg 4818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 988 - 1048
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||| ||||||||| ||||||| | || ||||| |||||||||||||    
T  988 tacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattg 1048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 25572 - 25632
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||||||| |||| ||||||||||||| ||||||| | || ||||| |||||||||||||    
T  25572 tacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattg 25632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 16820 - 16760
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    ||||| |||||||| ||| ||||||||| ||||| ||| |||||||| |||||||||||||    
T  16820 tacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattg 16760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 4321 - 4381
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| ||||||||||||| ||| ||||| || ||||  |||||||||||||    
T  4321 tacatggatcaaataacgtcatagtgttctattataaaccaaatttagatccaactcattg 4381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 58266 - 58326
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||||||| |||| |||| ||||||||| ||||| |   ||||||||||||    
T  58266 tacatggatcaaattacgacataatgttctatcataaaccatatcttggtccaactcattg 58326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 31710 - 31650
Alignment:
Q  486 tacatggatcaaattacgtcatagtgttttatcataaatcatatttgaatccaactcattg 546  Q
    |||||||||||||| || ||| |||||| ||||||| | || ||||| |||||||||||||    
T  31710 tacatggatcaaatgacttcacagtgttctatcatacaccaaatttggatccaactcattg 31650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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