View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11641_low_26 (Length: 235)
Name: NF11641_low_26
Description: NF11641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11641_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 25153318 - 25153539
Alignment:
| Q |
1 |
tagaagatgagcttgaacagcacatggcgaagtatcattgtctctacggtccttcgagagttttgtttactatcaaggaggaggaaagagaaggtgttga |
100 |
Q |
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| T |
25153318 |
tagaagatgagcttgaacagcacatggcgaagtatcattgtctctacggtccttcgagagttttgtttactatcaaggaggaggaaagagaaggtgttga |
25153417 |
T |
|
| Q |
101 |
gagtgagaatggttcttctacgacggaatgtagcagtgttgtgacggtgatgaaaggtagggcggtgaggagcatgcgtttgagtgagaatgtggtggat |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
25153418 |
gagtgagaatggttcttctacgacggagtgtagcagtgttgtgacggtgatgaaaggtagggcggtgaggagcatgcgtttgagtgagaatgtggtggtt |
25153517 |
T |
|
| Q |
201 |
ggtggtggtgatgaagttgttg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
25153518 |
ggtggtggtgatgaagttgttg |
25153539 |
T |
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