View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11641_low_3 (Length: 815)
Name: NF11641_low_3
Description: NF11641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11641_low_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 791; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 791; E-Value: 0
Query Start/End: Original strand, 16 - 806
Target Start/End: Original strand, 54396010 - 54396800
Alignment:
| Q |
16 |
aactaagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagc |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396010 |
aactaagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagc |
54396109 |
T |
|
| Q |
116 |
ttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaaca |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396110 |
ttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaaca |
54396209 |
T |
|
| Q |
216 |
acttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396210 |
acttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatc |
54396309 |
T |
|
| Q |
316 |
tcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctc |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396310 |
tcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctc |
54396409 |
T |
|
| Q |
416 |
acaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgtta |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396410 |
acaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgtta |
54396509 |
T |
|
| Q |
516 |
tcaaaatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctc |
615 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396510 |
tcaaaatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctc |
54396609 |
T |
|
| Q |
616 |
ccaagtcaaaaataagcacgttctgttcgccttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaa |
715 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396610 |
ccaagtcaaaaataagcacgttctgttcgccttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaa |
54396709 |
T |
|
| Q |
716 |
cacattcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttc |
806 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54396710 |
cacattcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttc |
54396800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 20 - 805
Target Start/End: Complemental strand, 23597162 - 23596377
Alignment:
| Q |
20 |
aagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttca |
119 |
Q |
| |
|
||||||||||||||| ||||||| |||||| || || || |||| ||||| ||||||||||| || ||||| || ||||| |||||||||||||| ||| |
|
|
| T |
23597162 |
aagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctca |
23597063 |
T |
|
| Q |
120 |
tcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaactt |
219 |
Q |
| |
|
|||||||| || ||||| ||||| || ||||||||||||||||| |||||||| |||||||| || |||||||| || ||||| |||||||||||||| | |
|
|
| T |
23597062 |
tcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacat |
23596963 |
T |
|
| Q |
220 |
catgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgc |
319 |
Q |
| |
|
||| |||| ||||||| |||||||||||||| | ||||||||||||||| |||||||| |||||||| | |||||| || | |||||||| | || |
|
|
| T |
23596962 |
catcaacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagc |
23596863 |
T |
|
| Q |
320 |
ccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaa |
419 |
Q |
| |
|
| ||||| || | || || ||||| || |||||||||||||||||||| || || || |||||||| || ||||| || |||||||||||||||||| |
|
|
| T |
23596862 |
gcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaa |
23596763 |
T |
|
| Q |
420 |
gctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaa |
519 |
Q |
| |
|
|| ||||| || || || | ||| |||| ||| ||||||||||| |||||||| |||||| | || || ||||||||| |||||||| |||||||||| |
|
|
| T |
23596762 |
gcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaa |
23596663 |
T |
|
| Q |
520 |
aatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaa |
619 |
Q |
| |
|
|||||||||| || | ||| ||||||||||| ||||||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| || | |
|
|
| T |
23596662 |
aatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccaccaccaag |
23596563 |
T |
|
| Q |
620 |
gtcaaaaataagcacgttctgttcgccttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaacaca |
719 |
Q |
| |
|
|| |||||||| ||||||| || || | || | |||||||||||| | |||||||||||| || |||||||| ||||| |||||||| |||| |||| |
|
|
| T |
23596562 |
atcgaaaataagaacgttcttctcaccagtacttgtagctttcttatcaagaccataagcaatagcggcagcagtgggctcgttaataattctcatcaca |
23596463 |
T |
|
| Q |
720 |
ttcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|| | || ||||| |||||||||| || |||||||||||||| ||||| ||||| || ||||| || || ||||| |||||||| |
|
|
| T |
23596462 |
ttgagtccagaaatgacaccagcatccttagtagcttgacgttgtgaatcgttgaagtatgcaggcacggttacaacggcattctt |
23596377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 21 - 805
Target Start/End: Complemental strand, 23588309 - 23587525
Alignment:
| Q |
21 |
agaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcat |
120 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || || || |||| || ||||| |||||||| || ||||| || || || ||||| ||||||||||||| |
|
|
| T |
23588309 |
agaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgccccatatgcaacagcttcat |
23588210 |
T |
|
| Q |
121 |
cagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttc |
220 |
Q |
| |
|
| ||||| || ||||| |||||||| || |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||||||||||| || |
|
|
| T |
23588209 |
cggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacatc |
23588110 |
T |
|
| Q |
221 |
atgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgcc |
320 |
Q |
| |
|
||| ||| ||||||| |||||||||||||| | ||||||||||||||| |||||||| |||||||||| |||||| || | |||||||| | ||| |
|
|
| T |
23588109 |
atggacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcc |
23588010 |
T |
|
| Q |
321 |
cttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaag |
420 |
Q |
| |
|
| || || || | || || ||||| || |||||||| ||||||||||| || || || |||||||| || ||||| || |||||||||||||| |||| |
|
|
| T |
23588009 |
cgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaag |
23587910 |
T |
|
| Q |
421 |
ctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaa |
520 |
Q |
| |
|
| ||||| ||||| || | ||| |||| ||| |||||||||||||||||||| |||||| | || || ||||||||| |||||||| ||||||||||| |
|
|
| T |
23587909 |
cagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaa |
23587810 |
T |
|
| Q |
521 |
atcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaag |
620 |
Q |
| |
|
||||||||| || | ||| ||||||||||| |||||||| || || ||||| ||||| ||||||||||| || |||||||| ||||||||||| || | |
|
|
| T |
23587809 |
atcttcacctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctcaatagtaagtagggaaacatcaaaagttccaccaccaaga |
23587710 |
T |
|
| Q |
621 |
tcaaaaataagcacgttctgttcgccttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaacacat |
720 |
Q |
| |
|
|| |||||||| ||||||| || || | || | |||||||||||| | |||||||||||| |||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
23587709 |
tcgaaaataagaacgttcttctcacccgtgcttgtagctttcttatcaagaccataagcaatagcagcagcggtaggttcattaataattctcaacacat |
23587610 |
T |
|
| Q |
721 |
tcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
| | || ||||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| |
|
|
| T |
23587609 |
tgagtccagaaatgacaccggcatcttttgtagcttgacgttgtgaatcgttgaagtaagcaggcacagttacaacggcattctt |
23587525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 731 - 805
Target Start/End: Original strand, 35132750 - 35132824
Alignment:
| Q |
731 |
aatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||||||||||||||| | || |||| |||||||||||| | ||||||||||| ||||||||||| |||||||| |
|
|
| T |
35132750 |
aatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggcacagtaacaactgcattctt |
35132824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 9336413 - 9336356
Alignment:
| Q |
75 |
ctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatac |
132 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
9336413 |
ctcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatac |
9336356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 222
Target Start/End: Original strand, 35132129 - 35132249
Alignment:
| Q |
102 |
ccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatc |
201 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| |||||||| | ||| ||||| ||||| || | ||||| ||||| || ||||| |||||||| | || | |
|
|
| T |
35132129 |
ccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagacc |
35132228 |
T |
|
| Q |
202 |
caccaacaagaacaacttcat |
222 |
Q |
| |
|
| |||||||||||||| |||| |
|
|
| T |
35132229 |
ctccaacaagaacaacatcat |
35132249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 47 - 806
Target Start/End: Complemental strand, 8017963 - 8017204
Alignment:
| Q |
47 |
atcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctct |
146 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||||||||||||||| || || ||||| |||||||||||||||||| |
|
|
| T |
8017963 |
atcttgaaccttttcattgccttcaccactcaaaattgctgcttgtacagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctct |
8017864 |
T |
|
| Q |
147 |
ttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttag |
246 |
Q |
| |
|
|| |||||||||||||| ||||| || || |||||||| ||||| || ||||| || |||||||||||||| ||||||||| |||| || ||||||| |
|
|
| T |
8017863 |
ttaccattgaagaaatcttgcaacagttgctgaactttgggaattctagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttag |
8017764 |
T |
|
| Q |
247 |
catcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaat |
346 |
Q |
| |
|
|||| || | ||||||||||||||| |||||||| || || |||| |||||| || | ||| |||||||| || | || || || | || ||||||| |
|
|
| T |
8017763 |
catctctcaaacacttctcaacaggctccatacactttctgaacagatccatgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaac |
8017664 |
T |
|
| Q |
347 |
tccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctctt |
446 |
Q |
| |
|
|| ||||||||||||||||| || || || || || ||||| ||||| || |||||||| ||||||||||||||||| || || ||||| | ||||| |
|
|
| T |
8017663 |
accctcaaacaaagaatcaatctcaatggtagtttgtgcagtagaagagagagttctcttcgctctctcacaagctgtcctcaacctcctaagtgctcta |
8017564 |
T |
|
| Q |
447 |
gcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcac |
546 |
Q |
| |
|
| || ||||||||||||||||| || |||||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
8017563 |
gggtttccactaatatccttcttgttcttcctcttaaactcctgaacaaaatgattaaccattctgttgtcaaaatcttcaccaccaagatgggtatcac |
8017464 |
T |
|
| Q |
547 |
cagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaagtcaaaaataagcacgttctgttcgcc |
646 |
Q |
| |
|
|||||||||| || ||||| || || || |||||||||||||||||||| ||||| ||||| ||||||||||||||||| || | ||| |||| ||||| |
|
|
| T |
8017463 |
cagcagtagccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtaccacctcccaagtcaaagatcaacacattcttctcgcc |
8017364 |
T |
|
| Q |
647 |
ttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatct |
746 |
Q |
| |
|
|| | ||| || || || | || || ||||| || ||||| || ||||| || ||||| ||||| ||||| | || | ||| |||| ||||| |
|
|
| T |
8017363 |
aacacttgtagcctttttgtcaagtccgtacgcaatagctgcagctgttggctcgttgataattctcaaaacattgagtcctgcaatgacaccggcatcc |
8017264 |
T |
|
| Q |
747 |
ttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttc |
806 |
Q |
| |
|
|| || |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||| |
|
|
| T |
8017263 |
tttgtggcttgacgctgcgaatcattgaagtaagctggaactgtaacaacggcattcttc |
8017204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 47 - 805
Target Start/End: Original strand, 8102285 - 8103043
Alignment:
| Q |
47 |
atcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctct |
146 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||| || || ||||||||||| ||||||||||||||||| || || ||||| || || ||||| ||||| |
|
|
| T |
8102285 |
atcttgaaccttctcatttccttcaccactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctcc |
8102384 |
T |
|
| Q |
147 |
ttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttag |
246 |
Q |
| |
|
|| ||||||||||| || ||||| || || |||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||||| || ||||||| |
|
|
| T |
8102385 |
ttaccattgaagaagtcttgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttag |
8102484 |
T |
|
| Q |
247 |
catcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaat |
346 |
Q |
| |
|
|||| || | ||||||||||||||| |||||||| ||||| |||| |||||| || | ||| |||||||| || | || || || | || ||||||| |
|
|
| T |
8102485 |
catctctcaaacacttctcaacaggctccatacacttcctgaacagatccatgttaagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaac |
8102584 |
T |
|
| Q |
347 |
tccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctctt |
446 |
Q |
| |
|
|| ||||||||||||||||| || || || || || || ||||| || || |||||||| ||||||||||| || ||||| |||||||| | || || |
|
|
| T |
8102585 |
accctcaaacaaagaatcaatctcaatggtagtttgtgcggttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagtgcccta |
8102684 |
T |
|
| Q |
447 |
gcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcac |
546 |
Q |
| |
|
| || || |||||||||||||| || |||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8102685 |
gggtttccgctaatatccttcttgttcttcctcttaaactcttgaacaaaatgggtaaccattctgttatcaaaatcttcaccaccaagatgggtatcac |
8102784 |
T |
|
| Q |
547 |
cagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaagtcaaaaataagcacgttctgttcgcc |
646 |
Q |
| |
|
| |||||||| || ||||| || || || ||||||||||||||||| || ||||| ||||| ||||| ||||| ||||| || | |||||||| || || |
|
|
| T |
8102785 |
ctgcagtagccttaacttcaaatataccctcttcaatagtaagaagtgacacatcaaaagtaccaccacccaaatcaaagatcaacacgttcttctcacc |
8102884 |
T |
|
| Q |
647 |
ttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatct |
746 |
Q |
| |
|
|| | || || || || | ||| || ||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| | ||| ||||||||||| |
|
|
| T |
8102885 |
aacacttgtcgcctttttgtcaagaccgtaggcaatagcagcagcagttggctcattaataattctcaaaacatttaaaccagcgataacaccagcatct |
8102984 |
T |
|
| Q |
747 |
ttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|| || |||||||| |||||||||||||| |||||||| ||||| || || |||||||| |
|
|
| T |
8102985 |
ttagttgcttgacgctgagaatcattgaagtaagcagggacagtgacgacggcattctt |
8103043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 42 - 805
Target Start/End: Original strand, 39985259 - 39986022
Alignment:
| Q |
42 |
agaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaa |
141 |
Q |
| |
|
|||||||| |||||||| |||| || ||||| ||||| || || || ||||||||||||||||| |||||||| |||||||| || || |||||||| | |
|
|
| T |
39985259 |
agaagatcctgaaccttctcattgccctcaccactcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgcata |
39985358 |
T |
|
| Q |
142 |
gctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatgaacatgactcttatcaat |
241 |
Q |
| |
|
|||| || || || |||||||| |||||||| |||||||| |||||||| || || || || || ||||| ||||| || || ||| |||| || || |
|
|
| T |
39985359 |
gctcctttccgttaaagaaatcttgcaaaagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcgtggacacttttcttgtccat |
39985458 |
T |
|
| Q |
242 |
cttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgcccttgtaatagttgcatagaaa |
341 |
Q |
| |
|
||| ||||| || | ||| |||||||| || ||||||||||| ||||| | |||||| || | || |||||||| || | ||||| | | |||||| |
|
|
| T |
39985459 |
cttggcatctctcaaacatttctcaactggctccatacattttctaaagagatccatgttgagctcctcaaatcttgcacgagtaatgggggagtagaaa |
39985558 |
T |
|
| Q |
342 |
tcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaag |
441 |
Q |
| |
|
|||||||||||||| | |||||||||||| || || ||||| ||||| ||||| || |||||||| ||||| |||||||| || || || ||||| | || |
|
|
| T |
39985559 |
tcaattccttcaaaaagagaatcaatttcaatggtggtctgggcagtagaagagagagttctcttcgctctttcacaagcagtcctcaacctcctaagag |
39985658 |
T |
|
| Q |
442 |
ctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagt |
541 |
Q |
| |
|
|||| | || ||||| || |||||||| || || ||| | ||||| |||||| || |||||||||||||| |||||||| ||||| |||||||| || |
|
|
| T |
39985659 |
ctctggggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggt |
39985758 |
T |
|
| Q |
542 |
atcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaagtcaaaaataagcacgttctgt |
641 |
Q |
| |
|
|| || || || |||||||| || ||||| || ||||||||||| || | ||| ||||| ||||| ||||| || | |||||| || | || |||| |
|
|
| T |
39985759 |
gtctccggctgtggctttcacctcaaagataccctcttcaatagttagcaaagagacatcaaaagtaccaccaccaaggtcaaagatcaagacattcttc |
39985858 |
T |
|
| Q |
642 |
tcgccttttctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccag |
741 |
Q |
| |
|
|| || || | |||||||| || | |||||||||||| ||||||||||| |||||||| ||||| | || ||||| | ||| | |||| | |||| |
|
|
| T |
39985859 |
tctccaacactggttgctttcttgtcaagaccataagcaatggcagcagcagtgggctcattgataattcgcatgacattaagaccggcaataactccag |
39985958 |
T |
|
| Q |
742 |
catctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||| || ||||||||||| || || ||||| || |||||||| |||||||||||||||||||| |
|
|
| T |
39985959 |
catccttggtagcttgacgctgggagtcattaaagtaagcagggacagtaacaacagcattctt |
39986022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 90 - 269
Target Start/End: Original strand, 17259902 - 17260081
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaa |
189 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| || |||||||| | || || || ||||||||||||||||| || || || ||||| |||| |
|
|
| T |
17259902 |
tgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcactttcggaa |
17260001 |
T |
|
| Q |
190 |
tccttgttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaaca |
269 |
Q |
| |
|
|||| | |||||||||||||| ||||| |||| || ||||| ||||||||| |||| || ||||||||||||||| |
|
|
| T |
17260002 |
tcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaaca |
17260081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 90 - 269
Target Start/End: Original strand, 17267600 - 17267779
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaa |
189 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||| ||||| | || ||||| |||||||| | |||||| || || || ||||| |||| |
|
|
| T |
17267600 |
tgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcactttcggaa |
17267699 |
T |
|
| Q |
190 |
tccttgttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaaca |
269 |
Q |
| |
|
|||| | || ||||||||||| ||||| |||| ||| ||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
17267700 |
tcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaaca |
17267779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 7878240 - 7878108
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaa |
189 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| || || |||||| || ||||| || || || |||||||| ||||| || ||||| ||| |
|
|
| T |
7878240 |
tgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaa |
7878141 |
T |
|
| Q |
190 |
tccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
|||| | ||||||||||||||| ||||| |||| |
|
|
| T |
7878140 |
tcctagatgatccaccaacaagtacaacatcat |
7878108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 735 - 805
Target Start/End: Complemental strand, 7877595 - 7877525
Alignment:
| Q |
735 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||||||||||||| || |||| ||||||||||||||||||||||| || ||||||||||| |||||||| |
|
|
| T |
7877595 |
gcaccagcatcttttgtggcttttcgttgagaatcattgaaataagccggcacagtaacaactgcattctt |
7877525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 393 - 553
Target Start/End: Original strand, 8570275 - 8570435
Alignment:
| Q |
393 |
gaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaa |
492 |
Q |
| |
|
|||||||| || || || |||||||||||||||||||| |||||||| ||| ||| || | ||||||||||| || || ||| || | |||| | | |
|
|
| T |
8570275 |
gaaagtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttca |
8570374 |
T |
|
| Q |
493 |
caaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagcagt |
553 |
Q |
| |
|
|||| ||| ||| |||||||||||||||||||||||| || || ||||| || |||||||| |
|
|
| T |
8570375 |
caaagtgagtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagt |
8570435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 393 - 553
Target Start/End: Original strand, 8581664 - 8581824
Alignment:
| Q |
393 |
gaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaa |
492 |
Q |
| |
|
|||||||| || || |||||||||||||| || || || || || | ||| ||| ||| ||| |||| |||| |||| ||| ||| | |||||||| | |
|
|
| T |
8581664 |
gaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgaca |
8581763 |
T |
|
| Q |
493 |
caaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagcagt |
553 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| || || || ||||| || |||||||| |
|
|
| T |
8581764 |
caaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagt |
8581824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 805
Target Start/End: Original strand, 8602229 - 8602350
Alignment:
| Q |
684 |
gcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcag |
783 |
Q |
| |
|
||||| ||||| |||||||| || |||| || ||||| | ||| | ||| |||||||||||||| || |||| || ||||||||||| |||||||| | |
|
|
| T |
8602229 |
gcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccg |
8602328 |
T |
|
| Q |
784 |
gaacagtaacaacagcattctt |
805 |
Q |
| |
|
| ||||||||||| |||||||| |
|
|
| T |
8602329 |
gcacagtaacaactgcattctt |
8602350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 8581361 - 8581493
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaa |
189 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||| || |||||||| | || ||||| | ||| || ||||| || |||||| ||||| |||| |
|
|
| T |
8581361 |
tgaatagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaa |
8581460 |
T |
|
| Q |
190 |
tccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
|||| | || ||||||||||| ||||| |||| |
|
|
| T |
8581461 |
tcctagaagaaccaccaacaaggacaacatcat |
8581493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 805
Target Start/End: Original strand, 8590894 - 8591014
Alignment:
| Q |
685 |
cagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcagg |
784 |
Q |
| |
|
|||| ||||| || |||||||| |||| || |||||||| || | ||| ||||||||||||| ||||||| | ||||||||||| |||||||| || |
|
|
| T |
8590894 |
cagcggcagttggttcattaattatccgcattacattcaagccagcaatgacaccagcatctttggtagctttcctctgagaatcattaaaataagctgg |
8590993 |
T |
|
| Q |
785 |
aacagtaacaacagcattctt |
805 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
8590994 |
cacagtaacaactgcattctt |
8591014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 731 - 802
Target Start/End: Original strand, 17260543 - 17260614
Alignment:
| Q |
731 |
aatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcatt |
802 |
Q |
| |
|
|||| ||||||||||| | || |||| || ||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
17260543 |
aataacaccagcatctatggtggcttttcgctgagaatcattgaaataagcaggaacagtaataacaacatt |
17260614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 8537700 - 8537734
Alignment:
| Q |
93 |
acagcagcaccataagcaacagcttcatcagggtt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
8537700 |
acagcagcaccataagcaacagcttcatcagggtt |
8537734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 8545297 - 8545343
Alignment:
| Q |
93 |
acagcagcaccataagcaacagcttcatcagggttaatactcttgca |
139 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
8545297 |
acagctgcaccataagcaacagcctcatcagggttaatgctcttgca |
8545343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 731 - 805
Target Start/End: Complemental strand, 10494240 - 10494166
Alignment:
| Q |
731 |
aatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
||||||||||||||| | ||||| | ||||||||||| ||||| ||||| || |||||||||||||||||||| |
|
|
| T |
10494240 |
aatagcaccagcatcaatagtagcctttcgttgagaatcgttgaagtaagccggcacagtaacaacagcattctt |
10494166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 735 - 796
Target Start/End: Complemental strand, 8382738 - 8382677
Alignment:
| Q |
735 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaac |
796 |
Q |
| |
|
|||||||||||||| || |||| |||||||||||||||||||| ||||| || |||||||| |
|
|
| T |
8382738 |
gcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcacggtaacaac |
8382677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 802
Target Start/End: Original strand, 6789842 - 6789885
Alignment:
| Q |
759 |
cgttgagaatcattgaaataagcaggaacagtaacaacagcatt |
802 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
6789842 |
cgttgagaatcattgaaataagcaggcacagtaataactgcatt |
6789885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 8575984 - 8576119
Alignment:
| Q |
87 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttg |
186 |
Q |
| |
|
||||| ||| ||||||||||||||||||| ||||||||||| || ||||| || | || ||||| ||||| | ||||| || |||||| ||||| | |
|
|
| T |
8575984 |
gcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttag |
8576083 |
T |
|
| Q |
187 |
gaatccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
||||||| | || ||||||||||| ||||| |||| |
|
|
| T |
8576084 |
gaatcctagaagaaccaccaacaaggacaacatcat |
8576119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 8590296 - 8590431
Alignment:
| Q |
87 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttg |
186 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||| || || || || ||| |||| || ||||| | || || || ||||| ||||| || ||||| | |
|
|
| T |
8590296 |
gcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgg |
8590395 |
T |
|
| Q |
187 |
gaatccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
||||||| | || ||||||||||| ||||| |||| |
|
|
| T |
8590396 |
gaatcctagaagaaccaccaacaagtacaacatcat |
8590431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 731 - 805
Target Start/End: Original strand, 3147574 - 3147648
Alignment:
| Q |
731 |
aatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||| ||||||||||| | || |||| || |||| |||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
3147574 |
aataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcaggtacggtaacaactgcattctt |
3147648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 802
Target Start/End: Complemental strand, 8585631 - 8585501
Alignment:
| Q |
672 |
ccataagcaattgcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaatcat |
771 |
Q |
| |
|
||||| ||||| || |||||||| || ||||| || ||||||| ||||| | || | ||| ||||||||||| | || |||| || |||||||||| |
|
|
| T |
8585631 |
ccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcat |
8585532 |
T |
|
| Q |
772 |
tgaaataagcaggaacagtaacaacagcatt |
802 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| |
|
|
| T |
8585531 |
tgaaataagcaggcacagtcacaactgcatt |
8585501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 735 - 805
Target Start/End: Complemental strand, 8636205 - 8636135
Alignment:
| Q |
735 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||||||||||||| || | || ||| |||||||||||||||||||| || ||||||| || |||||||| |
|
|
| T |
8636205 |
gcaccagcatctttggtggatttacgctgagaatcattgaaataagcgggcacagtaatgactgcattctt |
8636135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 8659021 - 8659071
Alignment:
| Q |
87 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttg |
137 |
Q |
| |
|
||||||| ||| ||||||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
8659021 |
gcttgaagagctgcaccataagcaacagcctcatctgggttgatactcttg |
8659071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 731 - 805
Target Start/End: Complemental strand, 13333322 - 13333248
Alignment:
| Q |
731 |
aatagcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||||||||||||||| | || || | || |||||||||||||| ||||| || ||||||||||| |||||||| |
|
|
| T |
13333322 |
aatagcaccagcatctatggtggcctttcgctgagaatcattgaagtaagccggcacagtaacaacggcattctt |
13333248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 7877862 - 7877773
Alignment:
| Q |
468 |
ttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagcagtagct |
557 |
Q |
| |
|
||||| |||||| |||||||| || ||||| |||| ||||||||||||||| || || ||||| || |||||||| || ||||||||| |
|
|
| T |
7877862 |
ttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagct |
7877773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 10494896 - 10494839
Alignment:
| Q |
75 |
ctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatac |
132 |
Q |
| |
|
|||||||| || || |||||||| ||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
10494896 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
10494839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 13333890 - 13333833
Alignment:
| Q |
75 |
ctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatac |
132 |
Q |
| |
|
|||||||| || || |||||||| ||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
13333890 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
13333833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 27831379 - 27831250
Alignment:
| Q |
93 |
acagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatcc |
192 |
Q |
| |
|
||||| |||||| |||||||||| |||||||| || || |||||||| | || || || ||||| || ||| ||| ||||| || ||||| ||||||| |
|
|
| T |
27831379 |
acagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatcc |
27831280 |
T |
|
| Q |
193 |
ttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
||| || ||||||||||| ||||| |||| |
|
|
| T |
27831279 |
ttgaagagccaccaacaaggacaacatcat |
27831250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 29582345 - 29582248
Alignment:
| Q |
93 |
acagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaat |
190 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| || ||| |||| | || ||||| ||||| || || ||||| ||||| || ||||| ||||| |
|
|
| T |
29582345 |
acagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaat |
29582248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 538
Target Start/End: Complemental strand, 17717185 - 17716746
Alignment:
| Q |
99 |
gcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttg |
198 |
Q |
| |
|
|||||||| |||||||| ||||| || ||||| |||||||| ||||| || | || |||||||||||||| || |||||||| |||||||| || || | |
|
|
| T |
17717185 |
gcaccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgcaatagttgttgaacctttggaattctggtag |
17717086 |
T |
|
| Q |
199 |
atccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccat |
298 |
Q |
| |
|
| || || ||||| ||||| ||||| ||| | || | ||| ||||| || | ||| |||||||| | |||||||||| ||| || | ||||| |
|
|
| T |
17717085 |
aacctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaacttgctccatacattccctgaagagatccaa |
17716986 |
T |
|
| Q |
299 |
attcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagt |
398 |
Q |
| |
|
|| | ||||||||||| || | ||||| | | ||||||||||||||| ||||| | | |||||||||| || || ||||| ||||| || || || |
|
|
| T |
17716985 |
gttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagatgataga |
17716886 |
T |
|
| Q |
399 |
gttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaat |
498 |
Q |
| |
|
| |||||| || ||||||||||| || || || ||| | | |||||||| || |||||||| |||||||| || || ||| | ||||| |||||| | |
|
|
| T |
17716885 |
gctctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaacaaagt |
17716786 |
T |
|
| Q |
499 |
gattcaccattctgttatcaaaatcttcaccaccaagatg |
538 |
Q |
| |
|
| |||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
17716785 |
ggttcaccattctgttattaaaatcctcacctccaagatg |
17716746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 12245916 - 12245787
Alignment:
| Q |
87 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttg |
186 |
Q |
| |
|
||||||||||| || |||||||||||||| || ||||||||||| |||||||| | || ||||| ||||| || ||||| || |||||||| ||||| | |
|
|
| T |
12245916 |
gcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggactttgg |
12245817 |
T |
|
| Q |
187 |
gaatccttgttgatccaccaacaagaacaa |
216 |
Q |
| |
|
||||||| | |||||||||||||| |||| |
|
|
| T |
12245816 |
gaatcctagaagatccaccaacaagtacaa |
12245787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 669 - 805
Target Start/End: Complemental strand, 17716621 - 17716485
Alignment:
| Q |
669 |
aaaccataagcaattgcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatctttcgtagcttgacgttgagaat |
768 |
Q |
| |
|
|||||||||||||| || |||||||| |||||||||||||| |||| | ||| | ||| | |||||||||||||| || |||||||| | |||||| |
|
|
| T |
17716621 |
aaaccataagcaatggctgcagcagtgggctcattaataattctcatgaaattaagaccagcaatagcaccagcatgcttagtagcttgtctctgagaaa |
17716522 |
T |
|
| Q |
769 |
cattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
||| || |||||||| ||||||||||| |||||||| |
|
|
| T |
17716521 |
aattaaagtaagcagggacagtaacaacggcattctt |
17716485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 11999066 - 11999200
Alignment:
| Q |
87 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttg |
186 |
Q |
| |
|
||||||||||| || |||||||| ||||| |||||||||||||| |||||||| | ||| ||||| ||||| || || || || |||||||| || |||| |
|
|
| T |
11999066 |
gcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggac-tttg |
11999164 |
T |
|
| Q |
187 |
gaatccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
| ||||| | |||||||||||||| ||||| |||| |
|
|
| T |
11999165 |
ggatcctagaagatccaccaacaagtacaacatcat |
11999200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 12234351 - 12234482
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaa |
189 |
Q |
| |
|
|||||||| || |||||||||| || || |||||||||||||||||||| ||||| ||||| ||||| ||||||||||| || || || ||||| |||| |
|
|
| T |
12234351 |
tgaacagctgcctcataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaa |
12234449 |
T |
|
| Q |
190 |
tccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
|||| | || || |||| ||| |||||||||| |
|
|
| T |
12234450 |
tcctagaggacccgccaataaggacaacttcat |
12234482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 222
Target Start/End: Complemental strand, 16658039 - 16657892
Alignment:
| Q |
75 |
ctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagct |
174 |
Q |
| |
|
|||||||| || ||||||||||| ||||| ||||||||||||||||| ||||| ||||| ||||| | || || || ||||| || || ||||| || | |
|
|
| T |
16658039 |
ctcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagat |
16657940 |
T |
|
| Q |
175 |
gttgaacttttggaatccttgttgatccaccaacaagaacaacttcat |
222 |
Q |
| |
|
|| ||||| |||||||| | ||| ||||| ||||||||||| |||| |
|
|
| T |
16657939 |
cctgcactttgggaatcctagatgagccacccacaagaacaacgtcat |
16657892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 538
Target Start/End: Complemental strand, 17718213 - 17718010
Alignment:
| Q |
335 |
atagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaagctgttcttaatctc |
434 |
Q |
| |
|
||||||||||||||| ||||| | | |||||||||| || || ||||| | ||| || || || | |||||| || ||||||||||| || || || || |
|
|
| T |
17718213 |
atagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagatgatagagctctcttcgccctctcacaagcagtcctcaacttc |
17718114 |
T |
|
| Q |
435 |
ctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaa |
534 |
Q |
| |
|
| | |||||||| || |||||||| |||||||| || || ||| | ||||| |||||| || |||||||||||||||| |||||| ||||| |||| |
|
|
| T |
17718113 |
ataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaacaaagtggttcaccattctgttattaaaatcctcacctccaa |
17718014 |
T |
|
| Q |
535 |
gatg |
538 |
Q |
| |
|
|||| |
|
|
| T |
17718013 |
gatg |
17718010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 538
Target Start/End: Complemental strand, 17648542 - 17648100
Alignment:
| Q |
96 |
gcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttg |
195 |
Q |
| |
|
||||||||||| |||||||| ||||| || ||||| || ||||| ||||| || || | |||||||||||||| || |||||||| |||||||| |||| |
|
|
| T |
17648542 |
gcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattcttg |
17648443 |
T |
|
| Q |
196 |
ttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatc |
295 |
Q |
| |
|
| || || || ||||| |||| ||||| ||| | || || ||| ||||||| || | ||| ||||||| | ||||||||||||||||| | ||| |
|
|
| T |
17648442 |
tagaaccgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagagatc |
17648343 |
T |
|
| Q |
296 |
catattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaa |
395 |
Q |
| |
|
||| || | || |||||||| || | ||||| | | ||||||||||||| || || | | |||||||||| || || || || ||| | || |
|
|
| T |
17648342 |
catgttgagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaatgat |
17648243 |
T |
|
| Q |
396 |
agtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaa |
495 |
Q |
| |
|
|| |||||||| || |||||||||| || || || ||| | | |||||||| || |||||||| |||||||| || || ||| | ||| | ||||| |
|
|
| T |
17648242 |
agagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaacaa |
17648143 |
T |
|
| Q |
496 |
aatgattcaccattctgttatcaaaatcttcaccaccaagatg |
538 |
Q |
| |
|
| ||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
17648142 |
agtgattcaccattctgttattaaaatcctcacctccaagatg |
17648100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 594 - 727
Target Start/End: Complemental strand, 5445754 - 5445621
Alignment:
| Q |
594 |
gaaacatcgaaagttccacctcccaagtcaaaaataagcacgttctgttcgccttttctcgaagctttcttatccaaaccataagcaattgcagcagcag |
693 |
Q |
| |
|
||||||||||| |||||||| || | ||||| | |||||| |||| || |||| |||| | |||||| ||||||||||||||||| ||||| |||| |
|
|
| T |
5445754 |
gaaacatcgaatgttccaccaccaagatcaaacacaagcacattcttctcaccttctctccacattttcttgtccaaaccataagcaatagcagctgcag |
5445655 |
T |
|
| Q |
694 |
taggctcattaataatcctcaacacattcaaacc |
727 |
Q |
| |
|
||||||| || || ||||||| |||||| ||||| |
|
|
| T |
5445654 |
taggctcgttgatgatcctcatcacattaaaacc |
5445621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 736 - 805
Target Start/End: Original strand, 12234996 - 12235065
Alignment:
| Q |
736 |
caccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
||||||||||| | || |||| |||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
12234996 |
caccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcacggtaacaactgcattctt |
12235065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 16662502 - 16662429
Alignment:
| Q |
87 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaa |
160 |
Q |
| |
|
||||| ||||| || |||||||||||||| ||||||||||| || |||||||| | ||| |||||||||||||| |
|
|
| T |
16662502 |
gcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
16662429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 5446282 - 5446218
Alignment:
| Q |
84 |
gctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctcttt |
148 |
Q |
| |
|
|||||||||||||| || |||||||| |||||||||||||| ||||| || |||||| ||||||| |
|
|
| T |
5446282 |
gctgcttgaacagcggcgccataagccacagcttcatcaggattaatgcttttgcaaggctcttt |
5446218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 12258787 - 12258715
Alignment:
| Q |
391 |
aagaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatc |
463 |
Q |
| |
|
||||||||| ||| || || ||||||||||||||| | ||||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
12258787 |
aagaaagtgatctttttgcactctcacaagctgttttcaatctcctcaaagctcttggatttccacttatatc |
12258715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 738 - 805
Target Start/End: Complemental strand, 12245265 - 12245198
Alignment:
| Q |
738 |
ccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
||||||||| |||| |||| || ||||||||| | ||||||||||| |||||||||||||||||||| |
|
|
| T |
12245265 |
ccagcatctatcgttgcttttcgctgagaatcactaaaataagcaggtacagtaacaacagcattctt |
12245198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 538
Target Start/End: Complemental strand, 17667184 - 17666742
Alignment:
| Q |
96 |
gcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttg |
195 |
Q |
| |
|
||||||||||| ||||||| || | || ||||| || ||||| ||||| || || || |||||||||||||| | |||||||| |||||||| || | |
|
|
| T |
17667184 |
gcagcaccatacacaacagcctcgttgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattctgg |
17667085 |
T |
|
| Q |
196 |
ttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatc |
295 |
Q |
| |
|
| || || || ||||| ||||| ||||| ||| || || || |||||||||| || | ||| |||||||| | ||||||||||||||||| | ||| |
|
|
| T |
17667084 |
tagaacctcctacaaggacaacatcatggacacttcttttgtccatcttagcatttctcaaacatttctcaacttgctccatacatttcctaaagagatc |
17666985 |
T |
|
| Q |
296 |
catattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaa |
395 |
Q |
| |
|
||| || | ||||||||| | || | ||||| | ||||||||||||| || || | | | |||||||| || || ||||||||||| || || |
|
|
| T |
17666984 |
catgttgagctcttcaaatgtggcacgagtaatgaaggagcagaaatcaattccctcgaatagacattcaatttcaatggtggtctgagcagtagatgat |
17666885 |
T |
|
| Q |
396 |
agtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaa |
495 |
Q |
| |
|
|| | |||||| || ||||||||||| || | || ||| | | |||||||| || ||||| || ||||| || || || || | ||||| ||||| |
|
|
| T |
17666884 |
agagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaacaa |
17666785 |
T |
|
| Q |
496 |
aatgattcaccattctgttatcaaaatcttcaccaccaagatg |
538 |
Q |
| |
|
| ||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
17666784 |
agtgattcaccattctgttattaaaatcctcacctccaagatg |
17666742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 538
Target Start/End: Complemental strand, 17705882 - 17705797
Alignment:
| Q |
453 |
ccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaagatg |
538 |
Q |
| |
|
|||||||| |||||||| || || ||| | ||||| ||||||| || |||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
17705882 |
ccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattctgttattaaaatcctcacctccaagatg |
17705797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 803
Target Start/End: Original strand, 7542556 - 7542600
Alignment:
| Q |
759 |
cgttgagaatcattgaaataagcaggaacagtaacaacagcattc |
803 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
7542556 |
cgttgagaatcattaaaataagcaggtacagtaacaactgcattc |
7542600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 735 - 805
Target Start/End: Complemental strand, 16657379 - 16657309
Alignment:
| Q |
735 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattctt |
805 |
Q |
| |
|
|||||||||||| | || |||| || || ||||||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
16657379 |
gcaccagcatctatggtggcttttcgctgcgaatcattgaagtaagctggcacagtaacaacagcattctt |
16657309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 17718452 - 17718358
Alignment:
| Q |
96 |
gcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaat |
190 |
Q |
| |
|
||||||||||| |||||||| ||||| || ||||| |||||||| || || || || || |||| ||||||| | || |||||||| |||||||| |
|
|
| T |
17718452 |
gcagcaccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccatagttgttgaacctttggaat |
17718358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 7541887 - 7541936
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgca |
139 |
Q |
| |
|
|||||||| || |||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
7541887 |
tgaacagctgccccataagcaacagcctcatcaggattaatgctcttgca |
7541936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 14703069 - 14703118
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgca |
139 |
Q |
| |
|
|||||||| || |||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
14703069 |
tgaacagctgccccataagctacagcttcatcagggttaatgctgttgca |
14703118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 12528165 - 12528325
Alignment:
| Q |
90 |
tgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaa |
189 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| || |||||| | | ||| || || ||||| || |||||||| ||||| | ||||| |||| |
|
|
| T |
12528165 |
tgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaa |
12528264 |
T |
|
| Q |
190 |
tccttgttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatc |
250 |
Q |
| |
|
|||| | || ||||||||||| |||| |||| ||| |||||| || ||||||||||| |
|
|
| T |
12528265 |
tcctagacgagccaccaacaagtacaatatcatctacactactcttgtccatcttagcatc |
12528325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 43744549 - 43744610
Alignment:
| Q |
162 |
tcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatg |
223 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| | || ||||||||||||||||| ||||| |
|
|
| T |
43744549 |
tcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatg |
43744610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000008; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 735 - 806
Target Start/End: Complemental strand, 4678420 - 4678349
Alignment:
| Q |
735 |
gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttc |
806 |
Q |
| |
|
|||||||||||| | ||||||| ||||||||||||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
4678420 |
gcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttc |
4678349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 4679081 - 4679015
Alignment:
| Q |
73 |
cgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgca |
139 |
Q |
| |
|
|||||||||| || ||||| | ||| ||||||||||||||||| ||||| ||||| ||||||||||| |
|
|
| T |
4679081 |
cgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactcttgca |
4679015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 15594698 - 15594815
Alignment:
| Q |
93 |
acagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatcc |
192 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| || ||| |||| | || || || | ||| ||||||| ||| || ||||| ||||| ||||||| |
|
|
| T |
15594698 |
acagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcc |
15594797 |
T |
|
| Q |
193 |
ttgttgatccaccaacaa |
210 |
Q |
| |
|
| | || |||||||||| |
|
|
| T |
15594798 |
tagaagacccaccaacaa |
15594815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 28219582 - 28219625
Alignment:
| Q |
93 |
acagcagcaccataagcaacagcttcatcagggttaatactctt |
136 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
28219582 |
acagctgcaccataagcaacagcctcatcagggttaatgctctt |
28219625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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