View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_high_22 (Length: 374)
Name: NF11645_high_22
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 16 - 363
Target Start/End: Original strand, 44814282 - 44814629
Alignment:
| Q |
16 |
ctctcaactacattatcttttcctcaataccgaactttgtatttgttcagtttggcagaaaaacctggcttaaatgttcttcaaatcctaaggaaacatt |
115 |
Q |
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| T |
44814282 |
ctctcaactacattatcttttcctcaataccaaactttgtatttgttcagtttggcagaaaaacatggcttaaatgttcttcaaatcctaaggaaacact |
44814381 |
T |
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| Q |
116 |
ttgtttggtaggcaaaacaagttgtaatcaacacagtgaaaataatacagtaaaacatgcatgattgtgcagcaagaacatagctccggtaagaaaagca |
215 |
Q |
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| T |
44814382 |
ttgtttggtaggcaaaacaagttgtaatcaacacagtgaaaataatacagtaaaacatgcatgattgtgcagcaagaacatagctccggtaagaaaagca |
44814481 |
T |
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| Q |
216 |
ataaaagaaagctttatgaaatttccataagccaacaaaatatagtccacagctcagtgcatgaaacttattccttggaatcaactcatccacatcttat |
315 |
Q |
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| T |
44814482 |
ataaaagaaagctttatgaaatttccataagccaacaaaatatagtccacagctcagtgcatgaaacttattccttggaatcaactcatccacatcttat |
44814581 |
T |
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| Q |
316 |
gaaacaattgaatattgaaggggataaaagttccaaaacatgacctat |
363 |
Q |
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| T |
44814582 |
gaaacaattgaatattgaaggggataaaagttccaaaacatgacctat |
44814629 |
T |
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