View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_high_34 (Length: 313)
Name: NF11645_high_34
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 14 - 306
Target Start/End: Complemental strand, 4937969 - 4937677
Alignment:
| Q |
14 |
agacagtggttgctaatgagacagagctggtcttggacggtggatttgttaagccacaggccaactcatttggtcacacttttaggttcaattcttcata |
113 |
Q |
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| T |
4937969 |
agacagtggttgctaatgagacagagctggtgttggacggtggatttgttaagccacaggccaactcatttggtcacacttttaggttcaattcttcata |
4937870 |
T |
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| Q |
114 |
acttactcacttttcactgtttgtaattaattacacactataaaaaataaacccaattggatttaccgatcggataggaaannnnnnnnatattttatat |
213 |
Q |
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| T |
4937869 |
acttactcactattcactgtttgtaattaattacacactataaaaaataaacccaattggatttaccgatcggataggaaa-tttttttatattttatat |
4937771 |
T |
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| Q |
214 |
ggtatttggattgatcaatctaaataatatagtgnnnnnnnngctattgagatggataaatctaaataaaagtgattttaaaaat-gatgatgt |
306 |
Q |
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| T |
4937770 |
ggtatttggattgatcaatctaaataatatagtgttttttttgctattgagatggataaatctaaataaaagtggttttaaaaatagatgatgt |
4937677 |
T |
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