View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_high_37 (Length: 298)
Name: NF11645_high_37
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 46540328 - 46540045
Alignment:
| Q |
1 |
tacttccacataagtgtgtatatatgtatattgtcttcacataacatgcaatatatatttcagtttaaagttggtctctagagtatgttaaaataatgta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
46540328 |
tacttccacataagtgtgtatatatgtatattgtcttcacataacatgcaatatatatttcagtttaaagttggtctctagagtaagttaaaataatgta |
46540229 |
T |
|
| Q |
101 |
gttattatttggattttgggtctctaagataactttatttctttttctattctgccatcgtcctggagctccttcaagtgtaaccaacaaaacacatcac |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46540228 |
gttattatttggattttgggtctccaagataactttatttctttttctattctgccatcgtcctggagctccttcaagtgtaaccaacaaaacacatcac |
46540129 |
T |
|
| Q |
201 |
aactagaaacctcttatccatcgatcatcgtcactcgttgcatattttgatttatttcggtcctctaactaaaaattgattcat |
284 |
Q |
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|||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46540128 |
aactagaaacctcttatccatccatcatcgtcactctttatatattttgatttatttcggtcctctaactaaaaattgattcat |
46540045 |
T |
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