View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_low_10 (Length: 496)
Name: NF11645_low_10
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 439; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 11 - 481
Target Start/End: Original strand, 34077221 - 34077691
Alignment:
| Q |
11 |
caaaggatgaaccttaggcatagtcattccataaacttcttgagtatcaatatcttgatgattcaaacccttaggtgggttccaatcaaaacaatgaaac |
110 |
Q |
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| T |
34077221 |
caaaggatgaaccttaggcatagtcattccataaacttcttgagtatcaatatcttgatgattcaaacccttaggtgggttccaatcaaaacaatgaaac |
34077320 |
T |
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| Q |
111 |
agtcgagccaaagccattaaaaccaaagtgactccaagtggtgcacccggacatttgcgttttccagcactaatcggcagtatcttaaaatcagctccat |
210 |
Q |
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| T |
34077321 |
aatcgagccaaagccattaaaaccaaagtgactccaagtggtgcacccggacacttgcgttttccagcactaaaaggcagtatcttaaaatcagctccat |
34077420 |
T |
|
| Q |
211 |
ggctgatctcaactcgactcccgctagttgaaaaatgcctctccggcctaaactcatccacattttcccaaatcttcgtgtttcgacctaatccatgggt |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077421 |
ggctgatctcaactcgactcccgctagttgaaaaatgcctctccggcctaaactcatctacattttcccaaatcttcgtgtttcgacctaatccatgggt |
34077520 |
T |
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| Q |
311 |
gttgatgaagactcgagtcttagaaggaatgcagtagccgttgatagtagtaggtcgaagagattcatgtggaatgaggaatggccctgctgggtgcatg |
410 |
Q |
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||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
34077521 |
gttgatgaagactcgagtcttagaagggatgtagtagccgttgatagtagtaggtcgaagagattcatgtggaatgaggaatggccctgctggatgcatg |
34077620 |
T |
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| Q |
411 |
cggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctatt |
481 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077621 |
cggaaagtttcacgtacaacacatcgtaggtaattaaggttaggcaaatcagattcaatcaccattctatt |
34077691 |
T |
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