View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_low_62 (Length: 239)
Name: NF11645_low_62
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_low_62 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 32705404 - 32705181
Alignment:
| Q |
1 |
attttgtcatttggattttcttgcaagagaaatccatagtgttctagaagctccaaatttgtgtatgttccatagcataatagaacctggtgaaaacaag |
100 |
Q |
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| T |
32705404 |
attttgtcatttggattttcttgcaagagaaatccatagtgttctagaagctccaaatttgtgtatgttccatagcataatagaacctggtgaaaacaag |
32705305 |
T |
|
| Q |
101 |
gtaacttgtcattcccaatctactaaacagtggaatgaagatagagcgaaaacaacgctcttttattttgactcgaaaaaatatttatacggaaagagga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
32705304 |
gtaacttgtcattcccaatctactaaacagtggaatgaagatagagcgaaaacaacgctcttttattttgactcgaaaaaatatttatacggaaagaaga |
32705205 |
T |
|
| Q |
201 |
aaatcagtccctgtaatagtttgt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
32705204 |
aaatcagtccctgtaatagtttgt |
32705181 |
T |
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