View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_low_66 (Length: 235)
Name: NF11645_low_66
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_low_66 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 41265041 - 41264821
Alignment:
| Q |
1 |
ttttactttataaattaattttgtaagattgaattagacacaatttaaattttagtgagaaaagtgattacatatcatatatatttttatcgtatgagaa |
100 |
Q |
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| T |
41265041 |
ttttgctttataaattaattttgtaagattgaattagacacaatttaaattttagtgagaaaagtgattatgtatcatatatatttttatcgtatgagaa |
41264942 |
T |
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| Q |
101 |
tataaactataaacaatctactataaactcttaatttaaacttgtcaaacatgatcctatttttagtatgaagatatgattaaaaaatctgaaattttat |
200 |
Q |
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| T |
41264941 |
tataaactataaac--------------tcttaatttaaacttatcaaacatgatcctatttttagtatgaagatatgattaaaaaatctgaaattttat |
41264856 |
T |
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| Q |
201 |
ggacaagtcacgtacagcttgcaaattagagcttc |
235 |
Q |
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| T |
41264855 |
ggacaagtcacgtacagcttgcaaattagagcttc |
41264821 |
T |
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