View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11645_low_73 (Length: 217)
Name: NF11645_low_73
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11645_low_73 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 50214357 - 50214558
Alignment:
| Q |
5 |
acaatgagatggacatcaagtctagtaacaatttacataagggctagttctatatgctttgctacacatcgtatatcaatttcagagcattcaatttcaa |
104 |
Q |
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| T |
50214357 |
acaattagatagacagcaagtctagtaacaatttacataagggctagttcaatatgctttgctacacatcgtatatcaatttcagagcattcaatttcaa |
50214456 |
T |
|
| Q |
105 |
ttctctcttctaaaactccattgttgcaacaagtattatatcagagatatatattattcatggtcacttaatataacaaacccgcacttcaattttacct |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50214457 |
ttctctcttctaaaactccattgttgcaacaagtattatatcagagatatatattattcatggtcacttaatataacaaacccgcacttcaattttacct |
50214556 |
T |
|
| Q |
205 |
tt |
206 |
Q |
| |
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|| |
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|
| T |
50214557 |
tt |
50214558 |
T |
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