View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11645_low_74 (Length: 215)

Name: NF11645_low_74
Description: NF11645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11645_low_74
NF11645_low_74
[»] chr1 (60 HSPs)
chr1 (4-91)||(35417923-35418010)
chr1 (90-159)||(45812641-45812710)
chr1 (90-159)||(18944626-18944695)
chr1 (90-159)||(34725202-34725271)
chr1 (90-159)||(47214494-47214563)
chr1 (90-159)||(22930173-22930242)
chr1 (90-159)||(32632662-32632731)
chr1 (101-159)||(27474275-27474333)
chr1 (101-159)||(41319912-41319970)
chr1 (90-159)||(14617021-14617090)
chr1 (90-159)||(20004198-20004267)
chr1 (90-159)||(30395834-30395903)
chr1 (90-159)||(34714606-34714675)
chr1 (90-151)||(40424725-40424786)
chr1 (95-159)||(6983915-6983978)
chr1 (95-159)||(18724651-18724714)
chr1 (99-159)||(23768426-23768486)
chr1 (90-158)||(46991787-46991855)
chr1 (95-158)||(20036209-20036271)
chr1 (90-152)||(8197026-8197088)
chr1 (95-148)||(19932869-19932922)
chr1 (90-151)||(38478394-38478455)
chr1 (90-159)||(46248059-46248128)
chr1 (95-159)||(2435893-2435956)
chr1 (95-159)||(4430132-4430196)
chr1 (90-146)||(18742080-18742136)
chr1 (90-158)||(25290146-25290214)
chr1 (90-159)||(10668203-10668277)
chr1 (105-159)||(27201645-27201699)
chr1 (103-152)||(6925096-6925145)
chr1 (90-158)||(9939443-9939512)
chr1 (90-151)||(19414422-19414483)
chr1 (90-159)||(45402078-45402146)
chr1 (106-159)||(50760332-50760385)
chr1 (106-159)||(52910216-52910269)
chr1 (106-158)||(2436000-2436052)
chr1 (95-159)||(33222972-33223036)
chr1 (100-159)||(14988025-14988084)
chr1 (95-158)||(22327088-22327150)
chr1 (95-158)||(35019219-35019281)
chr1 (106-152)||(35117881-35117927)
chr1 (90-159)||(12126941-12127010)
chr1 (90-159)||(18335394-18335463)
chr1 (95-156)||(18335955-18336016)
chr1 (98-159)||(22151495-22151556)
chr1 (90-158)||(10163742-10163810)
chr1 (107-158)||(25468370-25468421)
chr1 (95-158)||(49546014-49546076)
chr1 (106-152)||(10378838-10378884)
chr1 (90-148)||(21006127-21006185)
chr1 (117-158)||(31272481-31272522)
chr1 (95-151)||(11596502-11596557)
chr1 (107-159)||(19701570-19701622)
chr1 (95-159)||(50811928-50811991)
chr1 (107-158)||(44485216-44485267)
chr1 (95-157)||(15511259-15511320)
chr1 (101-159)||(21723658-21723715)
chr1 (117-159)||(43768168-43768210)
chr1 (106-151)||(17470460-17470505)
chr1 (123-159)||(35005139-35005175)
[»] chr7 (52 HSPs)
chr7 (90-159)||(32758221-32758290)
chr7 (97-158)||(11617695-11617756)
chr7 (90-159)||(47077959-47078028)
chr7 (90-159)||(21172113-21172182)
chr7 (90-159)||(42495941-42496010)
chr7 (90-151)||(48735235-48735296)
chr7 (95-159)||(10693177-10693241)
chr7 (95-159)||(19426995-19427059)
chr7 (90-159)||(2541125-2541195)
chr7 (89-159)||(35334920-35334990)
chr7 (90-159)||(14732928-14732997)
chr7 (90-159)||(42798629-42798698)
chr7 (90-159)||(42805484-42805553)
chr7 (90-159)||(43557432-43557501)
chr7 (95-159)||(27629599-27629663)
chr7 (90-158)||(46354154-46354222)
chr7 (86-149)||(40463833-40463896)
chr7 (90-151)||(7193045-7193106)
chr7 (98-159)||(7794612-7794673)
chr7 (90-159)||(18326994-18327063)
chr7 (98-159)||(34626313-34626374)
chr7 (90-159)||(42476833-42476902)
chr7 (95-151)||(28362259-28362314)
chr7 (95-158)||(29140467-29140530)
chr7 (109-159)||(11741774-11741824)
chr7 (90-152)||(22699083-22699145)
chr7 (104-158)||(33872016-33872070)
chr7 (90-159)||(1424016-1424085)
chr7 (90-159)||(5180263-5180332)
chr7 (95-152)||(13805068-13805124)
chr7 (90-159)||(47716419-47716488)
chr7 (95-151)||(3469293-3469348)
chr7 (93-149)||(19265779-19265834)
chr7 (95-159)||(23419780-23419843)
chr7 (107-158)||(6736867-6736918)
chr7 (90-157)||(8149054-8149121)
chr7 (95-158)||(12473269-12473332)
chr7 (96-151)||(28078245-28078300)
chr7 (112-159)||(42391204-42391251)
chr7 (106-156)||(19266426-19266476)
chr7 (95-159)||(48123590-48123653)
chr7 (96-151)||(39123857-39123911)
chr7 (90-159)||(2663039-2663106)
chr7 (105-159)||(7644931-7644985)
chr7 (106-152)||(14099119-14099165)
chr7 (106-152)||(14409136-14409182)
chr7 (90-159)||(21447550-21447619)
chr7 (106-159)||(42101991-42102044)
chr7 (106-151)||(29907393-29907440)
chr7 (90-133)||(25198682-25198725)
chr7 (100-138)||(28685261-28685299)
chr7 (106-159)||(44123727-44123780)
[»] chr4 (59 HSPs)
chr4 (90-159)||(11054252-11054321)
chr4 (89-159)||(21646923-21646993)
chr4 (90-159)||(47528634-47528703)
chr4 (90-159)||(48598929-48598998)
chr4 (90-160)||(30639340-30639410)
chr4 (90-159)||(5306769-5306838)
chr4 (90-159)||(5648219-5648288)
chr4 (90-159)||(6430731-6430800)
chr4 (90-158)||(10660364-10660432)
chr4 (90-158)||(10874509-10874577)
chr4 (95-159)||(16408709-16408773)
chr4 (90-158)||(20224944-20225012)
chr4 (90-149)||(23501753-23501812)
chr4 (90-159)||(5313100-5313169)
chr4 (90-151)||(14590797-14590858)
chr4 (90-151)||(16911522-16911583)
chr4 (90-158)||(37494811-37494879)
chr4 (103-159)||(44363238-44363294)
chr4 (90-152)||(13256510-13256572)
chr4 (90-151)||(17315412-17315473)
chr4 (95-150)||(47441645-47441699)
chr4 (96-159)||(49938696-49938759)
chr4 (110-159)||(17043500-17043549)
chr4 (90-159)||(30352697-30352766)
chr4 (93-158)||(42164255-42164319)
chr4 (95-148)||(54966987-54967039)
chr4 (106-158)||(487242-487294)
chr4 (103-159)||(40915802-40915858)
chr4 (108-158)||(32478892-32478942)
chr4 (118-155)||(7038041-7038078)
chr4 (105-158)||(19027823-19027876)
chr4 (95-148)||(25343153-25343205)
chr4 (90-151)||(54730209-54730270)
chr4 (95-159)||(8473726-8473790)
chr4 (90-138)||(20405053-20405101)
chr4 (95-159)||(30496426-30496490)
chr4 (111-159)||(39077900-39077948)
chr4 (106-150)||(43035224-43035268)
chr4 (108-159)||(9832417-9832468)
chr4 (113-159)||(7385582-7385628)
chr4 (116-158)||(25463108-25463150)
chr4 (95-149)||(49938554-49938608)
chr4 (90-127)||(18969701-18969738)
chr4 (90-151)||(20373908-20373969)
chr4 (106-159)||(35567146-35567199)
chr4 (113-158)||(41018900-41018945)
chr4 (108-148)||(23580325-23580365)
chr4 (90-138)||(29879624-29879672)
chr4 (108-152)||(30690296-30690340)
chr4 (95-151)||(50856350-50856405)
chr4 (95-159)||(54640445-54640508)
chr4 (90-138)||(55766593-55766641)
chr4 (107-149)||(3580952-3580994)
chr4 (110-152)||(54175043-54175085)
chr4 (106-151)||(12257707-12257752)
chr4 (106-147)||(39029179-39029220)
chr4 (115-151)||(32629382-32629418)
chr4 (95-159)||(36589710-36589772)
chr4 (90-126)||(55830860-55830896)
[»] chr3 (38 HSPs)
chr3 (92-159)||(26869691-26869758)
chr3 (90-159)||(8247795-8247864)
chr3 (90-159)||(10870057-10870126)
chr3 (90-159)||(7696991-7697060)
chr3 (90-159)||(13730710-13730779)
chr3 (90-159)||(46421143-46421212)
chr3 (90-159)||(52926316-52926385)
chr3 (98-156)||(4495773-4495831)
chr3 (90-159)||(1217072-1217141)
chr3 (90-159)||(9607185-9607254)
chr3 (90-159)||(12914141-12914210)
chr3 (90-159)||(29366828-29366897)
chr3 (90-151)||(39203498-39203559)
chr3 (90-158)||(40272919-40272987)
chr3 (90-159)||(13628898-13628968)
chr3 (90-158)||(5173827-5173896)
chr3 (90-151)||(16735423-16735484)
chr3 (90-159)||(22123021-22123090)
chr3 (89-141)||(25517297-25517349)
chr3 (95-159)||(26573115-26573178)
chr3 (106-159)||(53062036-53062089)
chr3 (107-159)||(34420750-34420802)
chr3 (95-159)||(45620935-45620998)
chr3 (90-159)||(12525392-12525458)
chr3 (90-159)||(6411927-6411996)
chr3 (90-159)||(22609749-22609817)
chr3 (110-159)||(30928253-30928302)
chr3 (116-159)||(516417-516460)
chr3 (107-157)||(25944468-25944518)
chr3 (111-159)||(7942993-7943041)
chr3 (90-130)||(21875002-21875042)
chr3 (95-159)||(35417904-35417967)
chr3 (106-157)||(33075926-33075977)
chr3 (104-146)||(33235526-33235569)
chr3 (99-148)||(11461758-11461807)
chr3 (90-151)||(26782348-26782409)
chr3 (106-150)||(28904941-28904985)
chr3 (106-158)||(53996673-53996725)
[»] chr8 (37 HSPs)
chr8 (89-159)||(20869602-20869672)
chr8 (90-159)||(12670354-12670423)
chr8 (90-159)||(30454201-30454270)
chr8 (90-159)||(39461102-39461171)
chr8 (95-159)||(17823541-17823605)
chr8 (95-159)||(28407381-28407445)
chr8 (90-157)||(24245411-24245478)
chr8 (90-159)||(2626479-2626548)
chr8 (90-159)||(20284179-20284248)
chr8 (90-159)||(21070808-21070877)
chr8 (90-159)||(25250482-25250551)
chr8 (90-159)||(28817732-28817801)
chr8 (90-159)||(35261639-35261708)
chr8 (90-159)||(36720756-36720825)
chr8 (90-158)||(7136636-7136704)
chr8 (95-159)||(18164865-18164929)
chr8 (97-151)||(13160669-13160723)
chr8 (90-159)||(29521791-29521860)
chr8 (95-159)||(6760787-6760851)
chr8 (95-159)||(42083805-42083868)
chr8 (90-158)||(44530109-44530177)
chr8 (95-158)||(31454153-31454216)
chr8 (95-158)||(44781613-44781675)
chr8 (96-158)||(8897871-8897933)
chr8 (90-159)||(11748259-11748328)
chr8 (90-159)||(26954092-26954161)
chr8 (90-159)||(45071225-45071294)
chr8 (112-158)||(31457155-31457201)
chr8 (109-158)||(35105902-35105951)
chr8 (106-158)||(11001057-11001109)
chr8 (106-158)||(22598133-22598185)
chr8 (95-159)||(30962879-30962942)
chr8 (90-126)||(40605044-40605080)
chr8 (99-158)||(12625858-12625917)
chr8 (90-127)||(23286431-23286468)
chr8 (107-147)||(24365178-24365218)
chr8 (99-159)||(40607830-40607890)
[»] scaffold0168 (1 HSPs)
scaffold0168 (90-159)||(30539-30608)
[»] chr6 (31 HSPs)
chr6 (90-159)||(1346924-1346993)
chr6 (90-159)||(1354861-1354930)
chr6 (90-160)||(3815182-3815252)
chr6 (95-159)||(12222023-12222087)
chr6 (106-159)||(9161099-9161152)
chr6 (90-151)||(24734593-24734654)
chr6 (90-157)||(8409203-8409270)
chr6 (95-157)||(13905087-13905148)
chr6 (94-152)||(14553476-14553533)
chr6 (89-159)||(14975186-14975256)
chr6 (90-148)||(20400627-20400685)
chr6 (90-151)||(33922942-33923003)
chr6 (98-158)||(2166519-2166579)
chr6 (98-158)||(2178152-2178212)
chr6 (90-159)||(29355963-29356033)
chr6 (106-159)||(12889402-12889455)
chr6 (90-151)||(12063427-12063488)
chr6 (90-159)||(15866143-15866212)
chr6 (107-148)||(32728273-32728314)
chr6 (106-158)||(2755531-2755583)
chr6 (100-159)||(8417442-8417501)
chr6 (95-138)||(19649294-19649337)
chr6 (99-151)||(6024202-6024254)
chr6 (122-158)||(17432332-17432368)
chr6 (116-159)||(23240928-23240971)
chr6 (90-136)||(1941815-1941861)
chr6 (102-159)||(27855544-27855601)
chr6 (108-149)||(32068074-32068115)
chr6 (98-158)||(22967139-22967199)
chr6 (98-158)||(23821194-23821254)
chr6 (95-151)||(24097546-24097602)
[»] chr5 (37 HSPs)
chr5 (90-159)||(38879541-38879610)
chr5 (90-159)||(43334162-43334231)
chr5 (90-159)||(8170088-8170157)
chr5 (90-159)||(24448850-24448919)
chr5 (90-159)||(27328712-27328781)
chr5 (90-159)||(35710273-35710342)
chr5 (90-159)||(37024660-37024729)
chr5 (90-159)||(41014279-41014348)
chr5 (90-158)||(1565391-1565459)
chr5 (90-152)||(4619219-4619281)
chr5 (90-158)||(30006285-30006353)
chr5 (90-159)||(22187245-22187314)
chr5 (90-158)||(23974741-23974808)
chr5 (90-151)||(22861780-22861841)
chr5 (106-152)||(209040-209086)
chr5 (95-149)||(39079882-39079935)
chr5 (95-149)||(39301089-39301142)
chr5 (90-151)||(31299592-31299653)
chr5 (95-159)||(17419879-17419943)
chr5 (102-158)||(22600426-22600482)
chr5 (95-138)||(12006457-12006500)
chr5 (117-159)||(32703411-32703453)
chr5 (90-138)||(2838738-2838787)
chr5 (107-156)||(31694217-31694266)
chr5 (114-150)||(1850624-1850660)
chr5 (95-151)||(10634260-10634315)
chr5 (90-138)||(19438709-19438757)
chr5 (106-158)||(28516541-28516593)
chr5 (90-122)||(41956892-41956924)
chr5 (95-158)||(19143049-19143111)
chr5 (93-159)||(3771305-3771370)
chr5 (113-159)||(9794465-9794511)
chr5 (113-158)||(1405170-1405215)
chr5 (108-137)||(28208235-28208264)
chr5 (105-146)||(31362454-31362495)
chr5 (110-151)||(34074676-34074717)
chr5 (122-158)||(42924941-42924977)
[»] chr2 (46 HSPs)
chr2 (90-159)||(12024024-12024093)
chr2 (90-159)||(14530278-14530347)
chr2 (90-159)||(8455422-8455491)
chr2 (90-157)||(10543658-10543725)
chr2 (90-152)||(21779372-21779434)
chr2 (98-160)||(26684727-26684789)
chr2 (90-159)||(11514396-11514465)
chr2 (90-159)||(23397726-23397795)
chr2 (90-150)||(27573581-27573641)
chr2 (100-159)||(24200731-24200790)
chr2 (90-149)||(25079834-25079893)
chr2 (90-159)||(7214494-7214563)
chr2 (90-159)||(22371017-22371086)
chr2 (90-159)||(25249843-25249912)
chr2 (102-158)||(44604826-44604882)
chr2 (101-152)||(17667973-17668024)
chr2 (90-157)||(17705455-17705522)
chr2 (90-133)||(27466262-27466305)
chr2 (90-159)||(14544023-14544092)
chr2 (90-151)||(17896219-17896280)
chr2 (90-159)||(19977820-19977889)
chr2 (95-159)||(35017783-35017847)
chr2 (108-158)||(5450263-5450313)
chr2 (90-159)||(9671140-9671210)
chr2 (101-151)||(17623535-17623585)
chr2 (96-158)||(39914413-39914475)
chr2 (90-151)||(5840988-5841049)
chr2 (105-158)||(40416978-40417031)
chr2 (107-151)||(99377-99421)
chr2 (115-159)||(25641487-25641531)
chr2 (90-130)||(39189556-39189596)
chr2 (95-158)||(24860093-24860156)
chr2 (106-160)||(23145803-23145857)
chr2 (106-160)||(23557593-23557647)
chr2 (95-148)||(4516468-4516520)
chr2 (110-158)||(17380343-17380391)
chr2 (106-158)||(29419996-29420048)
chr2 (106-150)||(33795261-33795305)
chr2 (106-149)||(21377189-21377232)
chr2 (108-159)||(31158547-31158598)
chr2 (121-158)||(10546153-10546190)
chr2 (95-140)||(39499339-39499384)
chr2 (95-148)||(44643488-44643540)
chr2 (107-159)||(4795730-4795782)
chr2 (119-151)||(19614981-19615013)
chr2 (107-151)||(45235932-45235976)
[»] scaffold0258 (1 HSPs)
scaffold0258 (90-159)||(13129-13198)
[»] scaffold0187 (4 HSPs)
scaffold0187 (90-159)||(10154-10223)
scaffold0187 (90-159)||(20482-20551)
scaffold0187 (90-149)||(8905-8964)
scaffold0187 (90-149)||(19233-19292)
[»] scaffold0005 (1 HSPs)
scaffold0005 (90-151)||(226520-226581)
[»] scaffold0024 (1 HSPs)
scaffold0024 (90-158)||(83835-83903)
[»] scaffold1176 (1 HSPs)
scaffold1176 (99-158)||(1692-1751)
[»] scaffold0057 (3 HSPs)
scaffold0057 (90-149)||(24883-24942)
scaffold0057 (95-158)||(46796-46859)
scaffold0057 (107-152)||(46996-47041)
[»] scaffold0049 (1 HSPs)
scaffold0049 (90-159)||(58937-59006)
[»] scaffold0254 (1 HSPs)
scaffold0254 (98-158)||(4125-4185)
[»] scaffold0223 (1 HSPs)
scaffold0223 (95-159)||(11097-11160)
[»] scaffold0311 (1 HSPs)
scaffold0311 (95-158)||(10775-10838)
[»] scaffold0036 (1 HSPs)
scaffold0036 (89-159)||(35124-35195)
[»] scaffold0116 (1 HSPs)
scaffold0116 (104-158)||(8865-8919)
[»] scaffold0194 (1 HSPs)
scaffold0194 (90-159)||(24624-24693)
[»] scaffold0031 (1 HSPs)
scaffold0031 (98-151)||(43097-43150)
[»] scaffold0018 (1 HSPs)
scaffold0018 (95-125)||(73001-73031)


Alignment Details
Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 35418010 - 35417923
Alignment:
Q  4 gcaatcctgtagtaaataaattatttaataatcaccaaaggctgcatatttccctttcacatccttctctttgttttgtcaacttata 91  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  35418010 gcaatcctgtagtaaataagttatttaataatcaccaaaggttgcatatttccctttcacatccttctctttattttgtcaacttata 35417923  T

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Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 45812710 - 45812641
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45812710 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 45812641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 18944626 - 18944695
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  18944626 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacag 18944695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 34725271 - 34725202
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  34725271 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 34725202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 47214494 - 47214563
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  47214494 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 47214563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 22930242 - 22930173
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  22930242 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacag 22930173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 32632731 - 32632662
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  32632731 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacag 32632662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 27474275 - 27474333
Alignment:
Q  101 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  27474275 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacag 27474333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 41319970 - 41319912
Alignment:
Q  101 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  41319970 caactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacag 41319912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 14617021 - 14617090
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  14617021 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacag 14617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 20004267 - 20004198
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  20004267 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 20004198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 30395903 - 30395834
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacag 30395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 34714606 - 34714675
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || ||||||    
T  34714606 taaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacag 34714675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 40424725 - 40424786
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  40424725 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 6983978 - 6983915
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  6983978 ttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacag 6983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 18724714 - 18724651
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18724714 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 18724651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 23768486 - 23768426
Alignment:
Q  99 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  23768486 cgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacag 23768426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 46991787 - 46991855
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  46991787 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 46991855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 20036209 - 20036271
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  20036209 ttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 20036271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 8197026 - 8197088
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  8197026 taaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctg 8197088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 19932922 - 19932869
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  19932922 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 38478455 - 38478394
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  38478455 taaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcct 38478394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 46248128 - 46248059
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||    
T  46248128 taaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacag 46248059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 2435956 - 2435893
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  2435956 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 2435893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 4430196 - 4430132
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||    
T  4430196 ttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacag 4430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 18742136 - 18742080
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaa 146  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18742136 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 18742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 25290146 - 25290214
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||||| || |||||    
T  25290146 taaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 10668203 - 10668277
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtc-----atgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||     |||||||||||||||||| ||||||||||||| ||||||    
T  10668203 taaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacag 10668277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 27201645 - 27201699
Alignment:
Q  105 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  27201645 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacag 27201699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 6925096 - 6925145
Alignment:
Q  103 actggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctg 6925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 9939443 - 9939512
Alignment:
Q  90 taacattggcgcaactggtaaa-gttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||| |||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaaca 9939512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 19414422 - 19414483
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||| || |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19414422 taaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcct 19414483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 45402078 - 45402146
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||| ||||||    
T  45402078 taaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacag 45402146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 50760385 - 50760332
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  50760385 ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacag 50760332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 52910216 - 52910269
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  52910216 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacag 52910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 2436052 - 2436000
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  2436052 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 2436000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 33222972 - 33223036
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | || ||||| || ||||||    
T  33222972 ttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacag 33223036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 14988084 - 14988025
Alignment:
Q  100 gcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||| |||||  || |||||| |||||||||||||||||||    
T  14988084 gcaactggtaaagttgttgtcatatgactagaaagtcacaagttcaagtcctgaaaacag 14988025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 22327088 - 22327150
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||| || |||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  22327088 ttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 22327150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 35019219 - 35019281
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||| |||||    
T  35019219 ttggcgcaac-ggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaaca 35019281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 35117927 - 35117881
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctg 35117881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 12127010 - 12126941
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||| |||||||||||||||||| | ||||||||||| |||| |||| ||| ||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacag 12126941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 18335463 - 18335394
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||| || ||||||| |||||||||| ||||||||||||| ||| |||||||| ||||||    
T  18335463 taaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacag 18335394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 18336016 - 18335955
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaa 156  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||| |||||||| |||||||    
T  18336016 ttggcgcaagtgataaagttgttgccatgtgtctgaaaggtcacatgttcaagttctgaaaa 18335955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 22151495 - 22151556
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||||||| ||| ||||||    
T  22151495 gcgcaactgataaagttgttgtcatctgactgtaaggtcataggttcaagttctggaaacag 22151556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 10163742 - 10163810
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||| |||||||||||||||||| || ||| || ||| ||| |||| |||||||||    
T  10163742 taacattggcgcaactgataaagttgttgtcatgtggctaaaatgttacaagtttaagttctgaaaaca 10163810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 25468421 - 25468370
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||| |||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaaca 25468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 49546076 - 49546014
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||| |||||||||||||||| ||| ||||||||| |||||||||||| || ||||||    
T  49546076 ttggcgcaac-ggtaaagttgttgtcacgtggctgaaaggttacaggttcaagttcttaaaaca 49546014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 10378884 - 10378838
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||    
T  10378884 ggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctg 10378838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 21006127 - 21006185
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||| ||| |||||| |||||| ||||||||||| ||||||||||||| ||||||||||    
T  21006127 taaccttgacgcaaccggtaaaattgttgtcatgcgactgaaaggtcaaaggttcaagt 21006185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 31272522 - 31272481
Alignment:
Q  117 tgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  31272522 tgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 31272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 11596502 - 11596557
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||| |||||||| | |||||||||||||||| ||||| ||||||||||||    
T  11596502 ttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcct 11596557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 19701570 - 19701622
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||| |||||||||    
T  19701570 gtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacag 19701622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 50811928 - 50811991
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||||||||| |||||||||||||||| |  ||| |||||| ||||||    
T  50811928 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacag 50811991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 44485267 - 44485216
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||| ||||||||||| ||||  ||||||| |||||    
T  44485267 gtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaaca 44485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 15511320 - 15511259
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||  || |||||||| ||||    
T  15511320 ttggcgcaa-tggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaac 15511259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 21723658 - 21723715
Alignment:
Q  101 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||| | ||| ||| |||| ||||||| ||||||    
T  21723658 caactggtaaagttgttgtcatgtgactggatggttacaagttc-agtcctggaaacag 21723715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 43768168 - 43768210
Alignment:
Q  117 tgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||    
T  43768168 tgtcatgtcactgaaaggtcacgggttcaagtcctggaaacag 43768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 17470505 - 17470460
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||||||||| ||||||||| |||||  ||||||||||||    
T  17470505 ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcct 17470460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 35005139 - 35005175
Alignment:
Q  123 gtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||| |||||||||| |||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacag 35005175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 32758221 - 32758290
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32758221 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacag 32758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 11617756 - 11617695
Alignment:
Q  97 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11617756 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 11617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 47078028 - 47077959
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  47078028 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 47077959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 21172182 - 21172113
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  21172182 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacag 21172113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 42496010 - 42495941
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  42496010 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacag 42495941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 48735296 - 48735235
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48735296 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcct 48735235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 10693241 - 10693177
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10693241 ttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 10693177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 19427059 - 19426995
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacag 19426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 2541195 - 2541125
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgact-gaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  2541195 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacag 2541125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 35334990 - 35334920
Alignment:
Q  89 ataacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||    
T  35334990 ataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacag 35334920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 14732997 - 14732928
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  14732997 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacag 14732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 42798629 - 42798698
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  42798629 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacag 42798698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 42805484 - 42805553
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  42805484 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 42805553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 43557432 - 43557501
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  43557432 taaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacag 43557501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 27629599 - 27629663
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||    
T  27629599 ttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacag 27629663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 46354154 - 46354222
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| |||||    
T  46354154 taaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaaca 46354222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 40463833 - 40463896
Alignment:
Q  86 cttataacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  40463833 cttataaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 40463896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 7193045 - 7193106
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  7193045 taaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcct 7193106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 7794673 - 7794612
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  7794673 gcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacag 7794612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 18326994 - 18327063
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||| | ||||||    
T  18326994 taaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacag 18327063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 34626374 - 34626313
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  34626374 gcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacag 34626313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 42476833 - 42476902
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||||| ||| ||||||    
T  42476833 taacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacag 42476902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 28362314 - 28362259
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  28362314 ttggcgcaac-ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcct 28362259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 29140530 - 29140467
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  |||||||  ||||||||    
T  29140530 ttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacacattcaagttttgaaaaca 29140467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 11741774 - 11741824
Alignment:
Q  109 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacag 11741824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 22699145 - 22699083
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  22699145 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctg 22699083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 33872070 - 33872016
Alignment:
Q  104 ctggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 33872016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 1424085 - 1424016
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||| ||||| ||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacag 1424016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 5180332 - 5180263
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||| | ||| ||||||    
T  5180332 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacag 5180263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 13805068 - 13805124
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  13805068 ttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctg 13805124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 47716419 - 47716488
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| ||||||| |||||||||| |||||||||| |||||||| ||||||||||||| ||||||    
T  47716419 taaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacag 47716488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 3469348 - 3469293
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  3469348 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcct 3469293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 19265779 - 19265834
Alignment:
Q  93 cattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  19265779 cattggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 19265834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 23419843 - 23419780
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||    
T  23419843 ttggcgcaac-ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacag 23419780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 6736867 - 6736918
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaaca 6736918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 8149121 - 8149054
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||| ||||| |||||||||| |||||||||||||||||| || |||||  |||||||||||||||||    
T  8149121 taaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaac 8149054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 12473269 - 12473332
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||| |||||||||||||||||||  |||||||||||  ||||||||||||| |||||    
T  12473269 ttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaaca 12473332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 28078300 - 28078245
Alignment:
Q  96 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||    
T  28078300 tggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 28078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 42391251 - 42391204
Alignment:
Q  112 gttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 42391204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 19266426 - 19266476
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaa 156  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  19266426 ggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaa 19266476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 48123653 - 48123590
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||||| ||||||| |||||||||||  ||||||||||||| ||||||    
T  48123653 ttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacag 48123590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 39123857 - 39123911
Alignment:
Q  96 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  39123857 tggcgcaa-tggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcct 39123911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 2663106 - 2663039
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||| ||||||||||||| ||||||||| |  |||| |||||||||||||| ||||||    
T  2663106 taaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacag 2663039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 7644931 - 7644985
Alignment:
Q  105 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||| ||||||| | |||||||||||||||| ||||||||||||| ||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacag 7644985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 14099165 - 14099119
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctg 14099119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 14409182 - 14409136
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctg 14409136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 21447550 - 21447619
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||| |||| |||||||||||| | || |||||||| | |||||||| |||||||||    
T  21447550 taaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacag 21447619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 42102044 - 42101991
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||| ||||||| ||||||| | |||||||||||| ||||||    
T  42102044 ggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacag 42101991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 29907393 - 29907440
Alignment:
Q  106 ggtaaagttgttgt--catgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcct 29907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 25198682 - 25198725
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaag 133  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||    
T  25198682 taaccttggcgtaactggtaaagttgttgtcatatgactgaaag 25198725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 28685299 - 28685261
Alignment:
Q  100 gcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  28685299 gcaactgttaaagttgttgtcatgtgactgaaagatcac 28685261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 44123780 - 44123727
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| ||||||||||||||||| | || ||||||||| ||| ||||||    
T  44123780 ggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacag 44123727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 11054321 - 11054252
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11054321 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacag 11054252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 21646923 - 21646993
Alignment:
Q  89 ataacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  21646923 ataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacag 21646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 47528703 - 47528634
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47528703 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacag 47528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 48598998 - 48598929
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  48598998 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 48598929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 30639340 - 30639410
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacaga 160  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  30639340 taaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacaga 30639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 5306838 - 5306769
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  5306838 taaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 5306769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 5648219 - 5648288
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  5648219 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacag 5648288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 6430800 - 6430731
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  6430800 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacag 6430731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 10660364 - 10660432
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  10660364 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaaca 10660432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 10874509 - 10874577
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  10874509 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaaca 10874577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 16408773 - 16408709
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  16408773 ttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 16408709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 20224944 - 20225012
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  20224944 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 20225012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 23501753 - 23501812
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23501753 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 5313169 - 5313100
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  5313169 taaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaacag 5313100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 14590797 - 14590858
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  14590797 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcct 14590858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 16911522 - 16911583
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  16911522 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcct 16911583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 37494811 - 37494879
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  37494811 taaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaaca 37494879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 44363294 - 44363238
Alignment:
Q  103 actggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacag 44363238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 13256572 - 13256510
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  13256572 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctg 13256510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 17315473 - 17315412
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  17315473 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcct 17315412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 47441699 - 47441645
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcc 150  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  47441699 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcc 47441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 49938759 - 49938696
Alignment:
Q  96 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacag 49938696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 17043549 - 17043500
Alignment:
Q  110 aagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacag 17043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 30352766 - 30352697
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||  ||||||| ||||||    
T  30352766 taaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacag 30352697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 42164319 - 42164255
Alignment:
Q  93 cattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| |||||||||| || |||||    
T  42164319 cattggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 42164255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 54966987 - 54967039
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  54966987 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagt 54967039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 487294 - 487242
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  487294 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 40915802 - 40915858
Alignment:
Q  103 actggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacag 40915858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 32478942 - 32478892
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaaca 32478892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 7038041 - 7038078
Alignment:
Q  118 gtcatgtgactgaaaggtcacaggttcaagtcctgaaa 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcctgaaa 7038078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 19027823 - 19027876
Alignment:
Q  105 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 19027876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 25343153 - 25343205
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  25343153 ttggcgcaa-tggtaaagttgttgtcacgtgactgataggtcacaggttcaagt 25343205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 54730209 - 54730270
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||  ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  54730209 taactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcct 54730270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 8473790 - 8473726
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||| |||| | |||||  | ||||||||||||| ||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacag 8473726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 20405053 - 20405101
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  20405053 taaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcac 20405101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 30496490 - 30496426
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||  ||||||||| || ||||||    
T  30496490 ttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacag 30496426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 39077948 - 39077900
Alignment:
Q  111 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacag 39077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 43035224 - 43035268
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcc 150  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcc 43035268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 9832468 - 9832417
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  9832468 taaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacag 9832417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 7385628 - 7385582
Alignment:
Q  113 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacag 7385582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 25463108 - 25463150
Alignment:
Q  116 ttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 25463150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 49938608 - 49938554
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||| |  ||||||||||||| |||||||||||||||||| ||||||||    
T  49938608 ttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtc 49938554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 18969701 - 18969738
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgac 127  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18969701 taaccttggcgcaactggtaaagttgttgtcatgtgac 18969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 20373969 - 20373908
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||||||| |||||||| |||| ||||||||| |||||| |||||| ||||    
T  20373969 taactttggcgcaactggtcaagttgttctcatatgactgaaatgtcacatgttcaattcct 20373908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 35567146 - 35567199
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| || ||||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacag 35567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 41018945 - 41018900
Alignment:
Q  113 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 41018900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 23580365 - 23580325
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagt 23580325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 29879672 - 29879624
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    ||||||||| ||||||| |||||||||||||||||||||  ||||||||    
T  29879672 taacattggtgcaactgataaagttgttgtcatgtgactagaaggtcac 29879624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 30690340 - 30690296
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctg 30690296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 50856405 - 50856350
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||| ||||||||||||    
T  50856405 ttggcgcaac-ggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcct 50856350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 54640508 - 54640445
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||| ||||||||| ||| |||||||||||| |||||||||| || ||||||    
T  54640508 ttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacag 54640445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 55766641 - 55766593
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    |||| ||| ||||||||||||||||||||||||||||| | ||||||||    
T  55766641 taaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcac 55766593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 3580994 - 3580952
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||||||||||||||||||| |||||  |||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc 3580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 54175043 - 54175085
Alignment:
Q  110 aagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||||||||||| ||||| | |||||||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctg 54175085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 12257752 - 12257707
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  12257752 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcct 12257707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 39029220 - 39029179
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaag 147  Q
    ||||||||||||||| ||||||| |||||||| |||||||||    
T  39029220 ggtaaagttgttgtcgtgtgactaaaaggtcataggttcaag 39029179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 32629418 - 32629382
Alignment:
Q  115 gttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcct 32629382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 36589710 - 36589772
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||| |||||  ||||||||| ||| ||||||||||||||| ||||||    
T  36589710 ttggcgcaac-ggtaaagttgatgtcacatgactgaaacgtc-caggttcaagtcctggaaacag 36589772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 55830896 - 55830860
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtga 126  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  55830896 taaccttgacgcaactggtaaagttgttgtcatgtga 55830860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 9e-26; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 26869691 - 26869758
Alignment:
Q  92 acattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26869691 acatcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacag 26869758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 8247864 - 8247795
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  8247864 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 8247795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 10870126 - 10870057
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10870126 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 10870057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 7697060 - 7696991
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  7697060 taaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacag 7696991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 13730779 - 13730710
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  13730779 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 13730710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 46421212 - 46421143
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  46421212 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacag 46421143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 52926385 - 52926316
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  52926385 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 52926316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 4495831 - 4495773
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaa 156  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  4495831 gcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaa 4495773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 1217072 - 1217141
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||    
T  1217072 taaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacag 1217141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 9607185 - 9607254
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  9607185 taaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacag 9607254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 12914210 - 12914141
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||    
T  12914210 taaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacag 12914141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 29366897 - 29366828
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  29366897 taaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacag 29366828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 39203498 - 39203559
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39203498 taaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 39203559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 40272987 - 40272919
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||    
T  40272987 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaaca 40272919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 13628968 - 13628898
Alignment:
Q  90 taacattggcgcaactggtaaa-gttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  13628968 taaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 13628898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 5173896 - 5173827
Alignment:
Q  90 taacattggcgcaactggtaaa-gttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  5173896 taaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 5173827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 16735423 - 16735484
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  16735423 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcct 16735484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 22123090 - 22123021
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||| ||||||    
T  22123090 taaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacag 22123021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 25517349 - 25517297
Alignment:
Q  89 ataacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacagg 141  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25517349 ataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacagg 25517297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 26573115 - 26573178
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  26573115 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 26573178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 53062036 - 53062089
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacag 53062089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 34420802 - 34420750
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 34420750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 45620998 - 45620935
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||    
T  45620998 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacag 45620935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 12525392 - 12525458
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||   ||| ||||||||||||||||||||| ||||||| ||||||    
T  12525392 taaccttggcgcaactggtaaagttgt---catatgactgaaaggtcacaggttcgagtcctggaaacag 12525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 6411996 - 6411927
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||||||||||||||||||||||| ||||| ||||||  |||||||||| || ||||||    
T  6411996 taaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacag 6411927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 22609749 - 22609817
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||| || |||||||||| || ||||||    
T  22609749 taaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacag 22609817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 30928302 - 30928253
Alignment:
Q  110 aagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 30928253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 516417 - 516460
Alignment:
Q  116 ttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 25944468 - 25944518
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||| ||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaac 25944518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 7942993 - 7943041
Alignment:
Q  111 agttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||| |||||||| | ||||||||||| ||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacag 7943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 21875002 - 21875042
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactga 130  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  21875002 taaccttgacgcaactggtaaagttgttgtcatgtgactga 21875042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 35417904 - 35417967
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||||||||| |||||||||||| |||||||  |||||| ||||| ||||||    
T  35417904 ttggcgcaac-ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacag 35417967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 33075977 - 33075926
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||||| |||||||||||||| ||| |||||||| |||||| ||||||||||    
T  33075977 ggtaaaattgttgtcatgtgattgagaggtcacatgttcaaatcctgaaaac 33075926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 33235526 - 33235569
Alignment:
Q  104 ctggtaaagttgttgtcatgtgac-tgaaaggtcacaggttcaa 146  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  33235526 ctggtaaagttgttgtcatgtgacatgaaaggtcacaagttcaa 33235569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 11461807 - 11461758
Alignment:
Q  99 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||| ||||    
T  11461807 cgcaactggtaaagttgttgtcatatgacaggaaggttacaggtttaagt 11461758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 26782348 - 26782409
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| ||| ||||| |||||||||| |||||||| || ||||||||||| | ||||||||||    
T  26782348 taaccttgacgcaattggtaaagttattgtcatgcgattgaaaggtcacggattcaagtcct 26782409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 28904941 - 28904985
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcc 150  Q
    ||||||||||||||||||||||| ||| |||||| ||| ||||||    
T  28904941 ggtaaagttgttgtcatgtgactaaaaagtcacatgtttaagtcc 28904985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 53996725 - 53996673
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||| |||||||||| |||||||||||||||  ||||||||| || |||||    
T  53996725 ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaaca 53996673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 20869672 - 20869602
Alignment:
Q  89 ataacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20869672 ataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 20869602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 12670423 - 12670354
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12670423 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 12670354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 30454270 - 30454201
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30454270 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 30454201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 39461171 - 39461102
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  39461171 taaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacag 39461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 17823541 - 17823605
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  17823541 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacag 17823605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 28407381 - 28407445
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  28407381 ttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 28407445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 24245411 - 24245478
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  24245411 taaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 2626479 - 2626548
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  2626479 taaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacag 2626548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 20284248 - 20284179
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20284248 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 20284179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 21070877 - 21070808
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21070877 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 21070808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 25250482 - 25250551
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  25250482 taaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacag 25250551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 28817801 - 28817732
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  28817801 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 28817732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 35261639 - 35261708
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||    
T  35261639 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacag 35261708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 36720756 - 36720825
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  36720756 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 36720825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 7136704 - 7136636
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||    
T  7136704 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaaca 7136636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 18164929 - 18164865
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18164929 ttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 18164865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 13160669 - 13160723
Alignment:
Q  97 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13160669 ggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 13160723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 29521860 - 29521791
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||| ||||||    
T  29521860 taaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacag 29521791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 6760787 - 6760851
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||| ||||||    
T  6760787 ttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacag 6760851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 42083868 - 42083805
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  42083868 ttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 42083805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 44530109 - 44530177
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||||||||||||| ||||||||||||  |||||||| |||||||||| || |||||    
T  44530109 taaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaaca 44530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 31454153 - 31454216
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||| |||| |||||||||||||||  |||||||||||| ||||| ||||||||||||    
T  31454153 ttggcgcaaccggtatagttgttgtcatgtggttgaaaggtcacatgttcatgtcctgaaaaca 31454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 44781675 - 44781613
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||| |||||||||||||||| ||||||||||| |||| ||||||||||||| |||||    
T  44781675 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaaca 44781613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 8897933 - 8897871
Alignment:
Q  96 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||||||||||||||||||| | |||||||| |||| |||||||| |||||    
T  8897933 tggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaaca 8897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 11748259 - 11748328
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| ||||||||| || |||||||||||||||||||| ||||| |||||||||| || ||||||    
T  11748259 taactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacag 11748328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 26954092 - 26954161
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||| || |||||||||||||||||||||| |  |||||||| ||||||||||||| ||||||    
T  26954092 taactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacag 26954161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 45071225 - 45071294
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||  |||||||||||||||||||||||| || |||||||| ||||||||| ||| ||||||    
T  45071225 taaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacag 45071294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 31457155 - 31457201
Alignment:
Q  112 gttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaaca 31457201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 35105902 - 35105951
Alignment:
Q  109 aaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||| |||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaaca 35105951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 11001109 - 11001057
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||| ||||||||| | ||||||| | |||||||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaaca 11001057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 22598133 - 22598185
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||  ||||||||||||||| ||||||| ||||| |||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaaca 22598185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 30962942 - 30962879
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| || |||||||||||||||||| |||||||||||   ||||||||||| ||||||    
T  30962942 ttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacag 30962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 40605080 - 40605044
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtga 126  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40605080 taactttggcgcaactggtaaagttgttgtcatgtga 40605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 12625858 - 12625917
Alignment:
Q  99 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||||| |||||||   ||||||| || |||||||||| |||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaaca 12625917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 23286468 - 23286431
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgac 127  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  23286468 taaccttgtcgcaactggtaaagttgttgtcatgtgac 23286431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 24365218 - 24365178
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaag 147  Q
    |||||||||||||||||||||| ||| ||||| ||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaag 24365178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 40607890 - 40607830
Alignment:
Q  99 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| |||||||||||||||||||| |||| || ||||   |||||||||| ||||||||    
T  40607890 cgcaattggtaaagttgttgtcatgtaactggaatgtcatgagttcaagtcccgaaaacag 40607830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 30539 - 30608
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30539 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacag 30608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 1346924 - 1346993
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1346924 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 1346993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 1354930 - 1354861
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1354930 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacag 1354861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 3815252 - 3815182
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacaga 160  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  3815252 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacaga 3815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 12222087 - 12222023
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  12222087 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacag 12222023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 9161099 - 9161152
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9161099 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacag 9161152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 24734593 - 24734654
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  24734593 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatcct 24734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 8409203 - 8409270
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||    
T  8409203 taaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaac 8409270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 13905148 - 13905087
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  13905148 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaac 13905087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 14553476 - 14553533
Alignment:
Q  94 attggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14553476 attggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctg 14553533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 14975256 - 14975186
Alignment:
Q  89 ataacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||| | ||||||||||| ||||||    
T  14975256 ataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacag 14975186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 20400627 - 20400685
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  20400627 taaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagt 20400685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 33923003 - 33922942
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  33923003 taaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtcct 33922942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 2166579 - 2166519
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  2166579 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaaca 2166519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 2178212 - 2178152
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  2178212 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaaca 2178152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 29356033 - 29355963
Alignment:
Q  90 taacattggcgcaactggtaaag-ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  29356033 taaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 29355963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 12889402 - 12889455
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  12889402 ggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacag 12889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 12063427 - 12063488
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||| ||||||| |||||||||| ||||| |||||||||||||| ||||||||||||    
T  12063427 taaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcct 12063488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 15866212 - 15866143
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| |||||||||||||||||| ||||||| ||||||||||  ||||||| ||||| ||||||    
T  15866212 taaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacag 15866143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 32728314 - 32728273
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagt 32728273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 2755583 - 2755531
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||||||||||||||  ||||||||||| || |||||    
T  2755583 ggtaaagttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaaca 2755531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 8417442 - 8417501
Alignment:
Q  100 gcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||| ||| || ||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaacag 8417501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 19649337 - 19649294
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  19649337 ttggcgcaactgataaagttgttgtcatgtgactgaaagatcac 19649294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 6024202 - 6024254
Alignment:
Q  99 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||||||||||||||||||||| || |||||||| | ||||| ||||    
T  6024202 cgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcct 6024254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 17432332 - 17432368
Alignment:
Q  122 tgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||||||||||||| |||||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaaca 17432368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 23240971 - 23240928
Alignment:
Q  116 ttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||    
T  23240971 ttgtcacgtgactgaaaggtcacaggtgcaagtcctggaaacag 23240928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 1941815 - 1941861
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtc 136  Q
    |||| |||| ||||||||||||||||||||||| |||||| ||||||    
T  1941815 taaccttggtgcaactggtaaagttgttgtcatctgactggaaggtc 1941861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 27855601 - 27855544
Alignment:
Q  102 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||| ||||||||||||||||| ||| |  ||| |||||| ||||||||    
T  27855601 aactggtaaagtttttgtcatgtgactgaaatgtcgcgagtttaagtcccgaaaacag 27855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 32068074 - 32068115
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||||||| ||||| ||||||||||| |||||||||    
T  32068074 taaagttgttgtcacgtgaccgaaaggtcacatgttcaagtc 32068115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 22967139 - 22967199
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||| ||| ||||||| |||||||||||||| ||||||||  ||||||||| || |||||    
T  22967139 gcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaaca 22967199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 23821254 - 23821194
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||| ||| ||||||| |||||||||||||| ||||||||  ||||||||| || |||||    
T  23821254 gcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaaca 23821194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 24097546 - 24097602
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||| ||||||||||| ||| |||||||| |||||||||||||  ||| |||||||    
T  24097546 ttggcacaactggtaaaattgatgtcatgttactgaaaggtcacgagtttaagtcct 24097602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 38879541 - 38879610
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  38879541 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 38879610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 43334162 - 43334231
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  43334162 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 43334231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 8170157 - 8170088
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacag 8170088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 24448850 - 24448919
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  24448850 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 24448919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 27328712 - 27328781
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27328712 taaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacag 27328781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 35710273 - 35710342
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  35710273 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacag 35710342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 37024729 - 37024660
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  37024729 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 37024660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 41014279 - 41014348
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  41014279 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 41014348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 1565391 - 1565459
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  1565391 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 1565459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 4619281 - 4619219
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  4619281 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctg 4619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 30006285 - 30006353
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||||| |||||||    
T  30006285 taacattggcgcaactgataaatttgttgtcatgtgactgaaaggtcatagattcaagtccggaaaaca 30006353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 22187245 - 22187314
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||| ||||||    
T  22187245 taactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacag 22187314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 23974741 - 23974808
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  23974741 taaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 23974808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 22861841 - 22861780
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  22861841 taaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcct 22861780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 209086 - 209040
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  209086 ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctg 209040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 39079935 - 39079882
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  39079935 ttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtc 39079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 39301089 - 39301142
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  39301089 ttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtc 39301142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 31299592 - 31299653
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||| ||||||||||||||||||||||||||||| | |||||||  |||||||||||    
T  31299592 taaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcct 31299653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 17419879 - 17419943
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||| |||||||||| ||||||| ||||||||||||||| ||  |||||||||||| ||||||    
T  17419879 ttggcgtaactggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtcctggaaacag 17419943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 22600426 - 22600482
Alignment:
Q  102 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||| ||||||||||| ||||| || ||||||||||||| |||||    
T  22600426 aactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaaca 22600482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 12006500 - 12006457
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    |||||||||||| | |||||||||||||||||||||||||||||    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcac 12006457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 32703411 - 32703453
Alignment:
Q  117 tgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 32703453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 2838738 - 2838787
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactg-aaaggtcac 138  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  2838738 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcac 2838787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 31694266 - 31694217
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaa 156  Q
    ||||||||||||||| |||||||| |||||| ||||||||||| ||||||    
T  31694266 gtaaagttgttgtcacgtgactgataggtcataggttcaagtcttgaaaa 31694217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 1850624 - 1850660
Alignment:
Q  114 tgttgtcatgtgactgaaaggtcacaggttcaagtcc 150  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcc 1850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 10634315 - 10634260
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||| ||| |||||||||||| |||||||||||||||  ||||||||||||    
T  10634315 ttggcgcaac-ggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcct 10634260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 19438709 - 19438757
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 138  Q
    |||| |||||||||||||||||||||||||||| ||||| |||| ||||    
T  19438709 taaccttggcgcaactggtaaagttgttgtcatatgactaaaagatcac 19438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 28516593 - 28516541
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||| ||| |||||||||||| |||||||||| || |||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaaca 28516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 41956892 - 41956924
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcat 122  Q
    |||||||||||||||||||||||||||||||||    
T  41956892 taacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 19143111 - 19143049
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||| ||||||| ||||||||| |||||| ||| | ||||||||||||||||| |||||    
T  19143111 ttggcgcaa-tggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaaca 19143049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 3771305 - 3771370
Alignment:
Q  93 cattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||| | ||| |||||| ||| ||||||||||||||||||||| ||||| || ||||||    
T  3771305 cattggcgcaacag-taatgttgttctcacgtgactgaaaggtcacaggtttaagtcatgtaaacag 3771370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 9794511 - 9794465
Alignment:
Q  113 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||   ||||||||| ||||||||||||||||||||    
T  9794511 ttgttgtcatgtgatcaaaaggtcacgggttcaagtcctgaaaacag 9794465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 1405170 - 1405215
Alignment:
Q  113 ttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||  |||||||| ||||||||||||| |||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaca 1405215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 137
Target Start/End: Complemental strand, 28208264 - 28208235
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtca 137  Q
    ||||||||||||||||||||||||||||||    
T  28208264 taaagttgttgtcatgtgactgaaaggtca 28208235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 31362495 - 31362454
Alignment:
Q  105 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaa 146  Q
    |||||||||||||||||||||| || |||||||| |||||||    
T  31362495 tggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 34074717 - 34074676
Alignment:
Q  110 aagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||||  |||||||||||||||| |||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcct 34074676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 42924977 - 42924941
Alignment:
Q  122 tgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||  ||||||||||||||||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaaca 42924941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 12024093 - 12024024
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12024093 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 12024024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 14530278 - 14530347
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14530278 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 14530347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 8455491 - 8455422
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  8455491 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 8455422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 10543658 - 10543725
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  10543658 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 10543725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 21779434 - 21779372
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  21779434 taaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctg 21779372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 26684789 - 26684727
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacaga 160  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  26684789 gcgcaactggtaaagttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacaga 26684727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 11514396 - 11514465
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  11514396 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacag 11514465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 23397726 - 23397795
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  23397726 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacag 23397795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 27573581 - 27573641
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcc 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtcc 27573641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 24200790 - 24200731
Alignment:
Q  100 gcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  24200790 gcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacag 24200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 25079893 - 25079834
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  25079893 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 25079834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 7214494 - 7214563
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||    
T  7214494 taactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacag 7214563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 22371017 - 22371086
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||    
T  22371017 taaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacag 22371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 25249912 - 25249843
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  25249912 taaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacag 25249843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 44604826 - 44604882
Alignment:
Q  102 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaaca 44604882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 17667973 - 17668024
Alignment:
Q  101 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctg 17668024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 17705455 - 17705522
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaac 157  Q
    |||| |||| |||||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||    
T  17705455 taaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaac 17705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 27466305 - 27466262
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaag 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27466305 taacattggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 14544023 - 14544092
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| |||||| || || ||| ||||||    
T  14544023 taaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacag 14544092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 17896219 - 17896280
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  17896219 taaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcct 17896280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 19977889 - 19977820
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  19977889 taaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacag 19977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 35017783 - 35017847
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgact-gaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  35017783 ttggcgcaac-ggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaacag 35017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 5450263 - 5450313
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaaca 5450313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 9671140 - 9671210
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgact-gaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||| ||||||||||||||||||||||| |||| ||||| ||||||| ||||| ||||||    
T  9671140 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacag 9671210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 17623535 - 17623585
Alignment:
Q  101 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcct 17623585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 39914475 - 39914413
Alignment:
Q  96 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||| |||||||||||||||||||||||||| |||||||| || |||||| ||| |||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaaca 39914413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 5840988 - 5841049
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||| |||| || |||||||||||||||||||||| |||||||| ||||||||||||    
T  5840988 taaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcct 5841049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 40417031 - 40416978
Alignment:
Q  105 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| || |||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaaca 40416978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 99421 - 99377
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcct 99377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 25641487 - 25641531
Alignment:
Q  115 gttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 25641531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 39189596 - 39189556
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactga 130  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  39189596 taaccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 24860156 - 24860093
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||| ||| |||| |||||    
T  24860156 ttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaaca 24860093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 23145857 - 23145803
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacaga 160  Q
    ||||||||||||||   |||||||||||||||| |||||||||| ||||||||||    
T  23145857 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacaga 23145803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 23557647 - 23557593
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacaga 160  Q
    ||||||||||||||   |||||||||||||||| |||||||||| ||||||||||    
T  23557647 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacaga 23557593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 4516520 - 4516468
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    |||||||||| |||||||||||||||| |||||||||||||||||  |||||||    
T  4516520 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacatattcaagt 4516468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 17380391 - 17380343
Alignment:
Q  110 aagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||| |||||||||| |||||||||| || |||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaaca 17380343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 29420048 - 29419996
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||||||||||  |||||||||||||||  |||||||||||| |||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaaca 29419996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 33795261 - 33795305
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcc 150  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcc 33795305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 21377232 - 21377189
Alignment:
Q  106 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||||||||||||||||||||||||||||| ||  |||||||||    
T  21377232 ggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtc 21377189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 31158598 - 31158547
Alignment:
Q  108 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||||||||||  |||| ||||| | |||||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacag 31158547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 10546153 - 10546190
Alignment:
Q  121 atgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaaca 10546190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 39499384 - 39499339
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacag 140  Q
    ||||||||||||||||||||||| |||||||| |  ||||||||||    
T  39499384 ttggcgcaactggtaaagttgttatcatgtgattttaaggtcacag 39499339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 44643488 - 44643540
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagt 148  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||  ||||||||    
T  44643488 ttggcgcaa-tggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagt 44643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 4795730 - 4795782
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||| |||||||||| |||||  ||| ||||| |||||||||    
T  4795730 gtaaagttgttgtcacgtgactgaaaagtcacttgttgaagtcttgaaaacag 4795782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 19614981 - 19615013
Alignment:
Q  119 tcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||||||||||||||||||| ||||||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtcct 19615013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 45235976 - 45235932
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||| ||||||||||||||| ||||  |||||||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcct 45235932  T

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Target: scaffold0258 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 13198 - 13129
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  13198 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacag 13129  T

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Target: scaffold0187 (Bit Score: 54; Significance: 3e-22; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 10223 - 10154
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10223 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 10154  T

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Target: scaffold0187; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 20551 - 20482
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  20551 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 20482  T

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Target: scaffold0187; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 8905 - 8964
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  8905 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

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Target: scaffold0187; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 19233 - 19292
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  19233 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

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Target: scaffold0005 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 226581 - 226520
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  226581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcct 226520  T

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Target: scaffold0024 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 83835 - 83903
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  83835 taaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

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Target: scaffold1176 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 1751 - 1692
Alignment:
Q  99 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  1751 cgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaaca 1692  T

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Target: scaffold0057 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 24942 - 24883
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 149  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24942 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 24883  T

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Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 46796 - 46859
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| ||||||||| ||| |||||    
T  46796 ttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaaca 46859  T

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Target: scaffold0057; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 47041 - 46996
Alignment:
Q  107 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctg 152  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||    
T  47041 gtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcctg 46996  T

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Target: scaffold0049 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 58937 - 59006
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| |||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||    
T  58937 taaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 59006  T

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Target: scaffold0254 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 4125 - 4185
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  4125 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaaca 4185  T

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Target: scaffold0223 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 11097 - 11160
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||    
T  11097 ttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacag 11160  T

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Target: scaffold0311 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 10775 - 10838
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||    
T  10775 ttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaaca 10838  T

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Target: scaffold0036 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 35195 - 35124
Alignment:
Q  89 ataacattggcgcaactggtaaagttg-ttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    ||||| |||| |||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||    
T  35195 ataactttggtgcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacag 35124  T

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Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 8865 - 8919
Alignment:
Q  104 ctggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 158  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaaca 8919  T

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Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 24624 - 24693
Alignment:
Q  90 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacag 159  Q
    |||| ||||| ||| || |||||||||||||| ||||||| |||||||| ||||||||||||| ||||||    
T  24624 taaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacag 24693  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 43097 - 43150
Alignment:
Q  98 gcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcct 151  Q
    ||||||||||||||||| ||||||||||| |||||||||||  ||||| |||||    
T  43097 gcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcct 43150  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 125
Target Start/End: Complemental strand, 73031 - 73001
Alignment:
Q  95 ttggcgcaactggtaaagttgttgtcatgtg 125  Q
    |||||||||||||||||||||||||||||||    
T  73031 ttggcgcaactggtaaagttgttgtcatgtg 73001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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