View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11646_high_53 (Length: 226)
Name: NF11646_high_53
Description: NF11646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11646_high_53 |
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Alignment Details
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 35435821 - 35436019
Alignment:
| Q |
15 |
aagaacggtggcggttggggaaagaggtggctcttggtagaggtgctttgtggcattttaccatttgttttagtttcctacttcttcgtagtttgaacta |
114 |
Q |
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| T |
35435821 |
aagaacggtggcggttggggaaagaggtggctcttggtagaggtgctttgtggcattttaccatttgttttagtttcctacctcttcgtggtttgaacta |
35435920 |
T |
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| Q |
115 |
tgattaagatatcgacatttaataagaggatatattattgctatatatcagtgaattttannnnnnnnctacaagttttagaactttatagaagataatg |
214 |
Q |
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| T |
35435921 |
tgattaagagatcaacatttaataagagaatatattattgctatatatcagtgaatttta-tttttttctacaagttttagaactttatagaagataatg |
35436019 |
T |
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