View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11646_low_10 (Length: 474)

Name: NF11646_low_10
Description: NF11646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11646_low_10
NF11646_low_10
[»] scaffold0026 (5 HSPs)
scaffold0026 (1-353)||(12534-12885)
scaffold0026 (364-459)||(12437-12543)
scaffold0026 (1-42)||(110364-110405)
scaffold0026 (1-42)||(110445-110486)
scaffold0026 (9-42)||(142811-142844)
[»] scaffold0634 (1 HSPs)
scaffold0634 (18-424)||(2751-3156)
[»] chr2 (66 HSPs)
chr2 (18-456)||(26582860-26583313)
chr2 (19-352)||(23168954-23169289)
chr2 (19-352)||(23580211-23580546)
chr2 (240-425)||(23089594-23089779)
chr2 (125-384)||(23062869-23063127)
chr2 (240-453)||(23101994-23102207)
chr2 (317-417)||(23878325-23878425)
chr2 (313-428)||(21907750-21907865)
chr2 (223-374)||(26884489-26884639)
chr2 (240-385)||(24660876-24661021)
chr2 (322-459)||(5706610-5706759)
chr2 (313-415)||(29281368-29281470)
chr2 (289-396)||(25181501-25181606)
chr2 (364-462)||(23264515-23264613)
chr2 (1-42)||(6261432-6261473)
chr2 (1-42)||(19662708-19662749)
chr2 (1-42)||(19662789-19662830)
chr2 (1-42)||(24660636-24660677)
chr2 (1-42)||(27208609-27208650)
chr2 (1-42)||(27210944-27210985)
chr2 (1-39)||(24943547-24943585)
chr2 (1-42)||(9693-9734)
chr2 (322-415)||(9957-10050)
chr2 (1-38)||(8889935-8889972)
chr2 (1-38)||(20648245-20648282)
chr2 (1-42)||(22860475-22860516)
chr2 (1-38)||(25107437-25107474)
chr2 (1-42)||(25181797-25181838)
chr2 (1-38)||(25267375-25267412)
chr2 (1-42)||(29281112-29281153)
chr2 (1-37)||(21907419-21907455)
chr2 (1-37)||(22796597-22796633)
chr2 (125-353)||(23264301-23264524)
chr2 (6-42)||(26884328-26884364)
chr2 (9-67)||(20914272-20914330)
chr2 (1-39)||(23062721-23062759)
chr2 (1-74)||(23291096-23291170)
chr2 (9-42)||(6261513-6261546)
chr2 (1-42)||(9241502-9241542)
chr2 (1-42)||(19649509-19649549)
chr2 (1-46)||(20260992-20261036)
chr2 (1-42)||(22810052-22810092)
chr2 (1-38)||(23752961-23752998)
chr2 (9-42)||(38931522-38931555)
chr2 (1-41)||(19703449-19703489)
chr2 (313-385)||(27208322-27208394)
chr2 (313-385)||(27210657-27210729)
chr2 (8-39)||(17634007-17634038)
chr2 (13-44)||(23089996-23090027)
chr2 (13-44)||(23102424-23102455)
chr2 (4-74)||(24652503-24652574)
chr2 (1-39)||(20724203-20724241)
chr2 (4-38)||(24658947-24658981)
chr2 (1-42)||(2105747-2105787)
chr2 (9-42)||(21123839-21123872)
chr2 (9-42)||(24669755-24669788)
chr2 (9-45)||(20591368-20591404)
chr2 (1-37)||(21073951-21073987)
chr2 (10-46)||(22841096-22841132)
chr2 (14-42)||(23148712-23148740)
chr2 (1-37)||(23264152-23264188)
chr2 (14-42)||(23560502-23560530)
chr2 (9-45)||(24504504-24504540)
chr2 (9-45)||(31503428-31503464)
chr2 (9-45)||(31505994-31506030)
chr2 (9-45)||(31755762-31755798)
[»] chr6 (77 HSPs)
chr6 (18-456)||(29614738-29615191)
chr6 (99-428)||(25396343-25396671)
chr6 (245-423)||(18799754-18799932)
chr6 (240-425)||(21565751-21565936)
chr6 (13-131)||(19786751-19786868)
chr6 (275-459)||(12167637-12167832)
chr6 (275-459)||(19286546-19286741)
chr6 (275-415)||(19877730-19877870)
chr6 (13-131)||(12167418-12167535)
chr6 (13-131)||(19877511-19877628)
chr6 (13-131)||(19883287-19883404)
chr6 (275-459)||(19883506-19883701)
chr6 (223-425)||(19300308-19300509)
chr6 (13-131)||(19286327-19286444)
chr6 (275-396)||(19786529-19786650)
chr6 (322-459)||(34640575-34640724)
chr6 (322-459)||(34647249-34647398)
chr6 (248-417)||(19471914-19472082)
chr6 (364-459)||(24513370-24513465)
chr6 (1-42)||(19472289-19472330)
chr6 (1-39)||(5290109-5290147)
chr6 (1-39)||(10582807-10582845)
chr6 (1-39)||(14616240-14616278)
chr6 (1-39)||(14724535-14724573)
chr6 (1-39)||(17414167-17414205)
chr6 (1-39)||(19451456-19451494)
chr6 (1-42)||(4476536-4476577)
chr6 (1-42)||(9099968-9100009)
chr6 (1-42)||(14995915-14995956)
chr6 (1-42)||(15457634-15457675)
chr6 (1-42)||(15464229-15464270)
chr6 (1-38)||(19467994-19468031)
chr6 (322-415)||(20008529-20008622)
chr6 (1-42)||(20008844-20008885)
chr6 (1-42)||(21365432-21365473)
chr6 (1-42)||(23969414-23969455)
chr6 (1-38)||(24720770-24720807)
chr6 (1-42)||(25396175-25396216)
chr6 (1-42)||(29096982-29097023)
chr6 (1-42)||(31251540-31251581)
chr6 (313-459)||(25470290-25470448)
chr6 (1-40)||(4476616-4476655)
chr6 (335-457)||(21365067-21365200)
chr6 (335-457)||(23969049-23969182)
chr6 (1-74)||(2708540-2708614)
chr6 (1-74)||(19819069-19819143)
chr6 (1-39)||(24513796-24513834)
chr6 (9-42)||(221848-221881)
chr6 (1-42)||(8768141-8768181)
chr6 (1-46)||(12941968-12942012)
chr6 (1-38)||(23233377-23233414)
chr6 (9-42)||(25347265-25347298)
chr6 (10-46)||(9185880-9185916)
chr6 (10-46)||(18137658-18137694)
chr6 (13-53)||(19439883-19439923)
chr6 (10-42)||(21469902-21469934)
chr6 (10-42)||(21476403-21476435)
chr6 (9-65)||(29416409-29416465)
chr6 (13-44)||(18788539-18788570)
chr6 (13-44)||(18799519-18799550)
chr6 (408-459)||(19786455-19786506)
chr6 (13-44)||(21566153-21566184)
chr6 (8-42)||(5290046-5290080)
chr6 (1-39)||(19588551-19588589)
chr6 (9-67)||(23105373-23105431)
chr6 (1-39)||(23234896-23234933)
chr6 (9-38)||(14133011-14133040)
chr6 (9-38)||(18786245-18786274)
chr6 (408-457)||(19877874-19877923)
chr6 (9-38)||(22798488-22798517)
chr6 (9-42)||(25749893-25749926)
chr6 (9-45)||(2288182-2288218)
chr6 (290-353)||(9186841-9186903)
chr6 (9-45)||(16829622-16829658)
chr6 (10-38)||(17027158-17027186)
chr6 (1-37)||(19726775-19726810)
chr6 (10-42)||(25772793-25772825)
[»] chr3 (84 HSPs)
chr3 (13-415)||(41455741-41456144)
chr3 (1-417)||(18914177-18914590)
chr3 (313-453)||(55499658-55499798)
chr3 (313-423)||(16802029-16802139)
chr3 (222-404)||(13324381-13324562)
chr3 (323-456)||(24192274-24192418)
chr3 (83-140)||(18136117-18136174)
chr3 (222-353)||(13302844-13302974)
chr3 (222-353)||(13313520-13313650)
chr3 (1-74)||(18136249-18136323)
chr3 (1-42)||(13692094-13692135)
chr3 (1-42)||(14764014-14764055)
chr3 (1-42)||(23371760-23371801)
chr3 (1-42)||(23371841-23371882)
chr3 (1-42)||(51300353-51300394)
chr3 (1-44)||(18900176-18900219)
chr3 (1-39)||(11850630-11850668)
chr3 (9-67)||(13036924-13036982)
chr3 (1-74)||(15518666-15518740)
chr3 (1-39)||(17496292-17496330)
chr3 (1-38)||(11644786-11644823)
chr3 (1-42)||(12034312-12034353)
chr3 (1-38)||(12202453-12202490)
chr3 (1-38)||(12479675-12479712)
chr3 (1-42)||(14764095-14764136)
chr3 (1-42)||(14864959-14865000)
chr3 (83-136)||(18129607-18129660)
chr3 (1-73)||(18129736-18129809)
chr3 (1-42)||(19235965-19236006)
chr3 (1-42)||(20249101-20249142)
chr3 (1-42)||(51300273-51300314)
chr3 (1-53)||(31690551-31690602)
chr3 (1-53)||(31943613-31943664)
chr3 (313-415)||(14865216-14865319)
chr3 (5-39)||(2270227-2270261)
chr3 (1-39)||(10390365-10390403)
chr3 (1-39)||(10415474-10415512)
chr3 (1-39)||(10422144-10422182)
chr3 (8-42)||(11850567-11850601)
chr3 (1-39)||(19443641-19443679)
chr3 (8-42)||(20249037-20249071)
chr3 (1-42)||(12153025-12153066)
chr3 (1-42)||(12255294-12255334)
chr3 (1-46)||(12304917-12304961)
chr3 (1-34)||(12355944-12355977)
chr3 (1-34)||(12362493-12362526)
chr3 (1-42)||(17130867-17130908)
chr3 (9-42)||(17512722-17512755)
chr3 (1-42)||(18719101-18719141)
chr3 (8-41)||(38312055-38312088)
chr3 (10-42)||(1989226-1989258)
chr3 (10-46)||(12855892-12855928)
chr3 (10-42)||(15011967-15011999)
chr3 (9-65)||(34852152-34852208)
chr3 (13-44)||(16802415-16802446)
chr3 (2-41)||(18889138-18889177)
chr3 (1-44)||(23173931-23173973)
chr3 (1-39)||(11964871-11964909)
chr3 (1-39)||(13313906-13313943)
chr3 (1-39)||(13324818-13324855)
chr3 (8-42)||(23174392-23174426)
chr3 (409-458)||(10390034-10390083)
chr3 (409-458)||(10415123-10415172)
chr3 (409-458)||(10421793-10421842)
chr3 (358-423)||(12034007-12034072)
chr3 (13-42)||(12255750-12255779)
chr3 (9-38)||(12274406-12274435)
chr3 (1-42)||(12961369-12961409)
chr3 (1-42)||(14288974-14289015)
chr3 (9-38)||(14569979-14570008)
chr3 (1-42)||(14652683-14652723)
chr3 (9-38)||(15934960-15934989)
chr3 (13-42)||(17199007-17199036)
chr3 (2-39)||(23174327-23174363)
chr3 (88-192)||(9533232-9533335)
chr3 (9-45)||(10554246-10554282)
chr3 (9-45)||(16799624-16799660)
chr3 (16-44)||(17157244-17157272)
chr3 (1-37)||(17243651-17243687)
chr3 (16-44)||(24191945-24191973)
chr3 (9-45)||(54973214-54973250)
chr3 (9-45)||(54975824-54975860)
chr3 (9-45)||(54978434-54978470)
chr3 (9-45)||(55292687-55292723)
[»] scaffold0029 (6 HSPs)
scaffold0029 (18-353)||(110943-111284)
scaffold0029 (1-42)||(92099-92140)
scaffold0029 (1-42)||(97825-97866)
scaffold0029 (317-415)||(91783-91881)
scaffold0029 (317-415)||(97509-97607)
scaffold0029 (408-456)||(111330-111378)
[»] scaffold0456 (4 HSPs)
scaffold0456 (186-353)||(241-407)
scaffold0456 (186-353)||(7386-7552)
scaffold0456 (375-459)||(409-504)
scaffold0456 (375-459)||(7554-7649)
[»] chr7 (102 HSPs)
chr7 (18-456)||(13123506-13123963)
chr7 (150-415)||(13742860-13743121)
chr7 (18-406)||(12710496-12710892)
chr7 (240-462)||(16676623-16676845)
chr7 (240-462)||(17650859-17651081)
chr7 (18-131)||(13742690-13742803)
chr7 (275-459)||(13006706-13006901)
chr7 (146-384)||(46625166-46625403)
chr7 (125-384)||(13678649-13678906)
chr7 (313-423)||(11389910-11390020)
chr7 (13-131)||(13006487-13006604)
chr7 (339-417)||(20311631-20311709)
chr7 (1-42)||(147239-147280)
chr7 (1-42)||(832947-832988)
chr7 (1-42)||(836990-837031)
chr7 (1-42)||(1198127-1198168)
chr7 (1-42)||(1202170-1202211)
chr7 (1-42)||(3289746-3289787)
chr7 (1-42)||(10897068-10897109)
chr7 (324-459)||(12591230-12591377)
chr7 (1-42)||(14320530-14320571)
chr7 (1-42)||(15166946-15166987)
chr7 (1-42)||(16008336-16008377)
chr7 (1-42)||(18872037-18872078)
chr7 (1-42)||(18872118-18872159)
chr7 (1-42)||(46625021-46625062)
chr7 (4-52)||(1612795-1612843)
chr7 (290-405)||(11383440-11383554)
chr7 (1-41)||(20907326-20907366)
chr7 (9-67)||(12694768-12694826)
chr7 (1-39)||(14178973-14179011)
chr7 (313-415)||(16090457-16090559)
chr7 (1-42)||(2464483-2464524)
chr7 (1-42)||(2966102-2966143)
chr7 (1-42)||(3327973-3328014)
chr7 (1-42)||(3858321-3858362)
chr7 (1-42)||(10897149-10897190)
chr7 (1-38)||(11857669-11857706)
chr7 (5-42)||(12547350-12547387)
chr7 (1-42)||(14565960-14566001)
chr7 (1-38)||(15104307-15104344)
chr7 (1-42)||(16008255-16008296)
chr7 (1-42)||(16090200-16090241)
chr7 (1-42)||(29182008-29182049)
chr7 (1-38)||(46682157-46682194)
chr7 (313-385)||(14320243-14320315)
chr7 (1-44)||(11383804-11383846)
chr7 (1-44)||(11390292-11390334)
chr7 (88-179)||(18607248-18607339)
chr7 (1-44)||(20328214-20328256)
chr7 (8-42)||(10896982-10897016)
chr7 (9-67)||(15142381-15142439)
chr7 (8-42)||(15167017-15167051)
chr7 (9-67)||(16073905-16073963)
chr7 (9-67)||(16476072-16476130)
chr7 (1-38)||(82041-82078)
chr7 (1-46)||(11303020-11303064)
chr7 (1-38)||(12801261-12801298)
chr7 (9-42)||(14565887-14565920)
chr7 (1-38)||(15097930-15097967)
chr7 (1-38)||(16187693-16187730)
chr7 (1-42)||(18607035-18607075)
chr7 (339-428)||(21231554-21231643)
chr7 (1-38)||(46348719-46348756)
chr7 (88-192)||(147453-147556)
chr7 (335-415)||(2464758-2464838)
chr7 (335-415)||(3858007-3858087)
chr7 (10-42)||(14038758-14038790)
chr7 (10-42)||(14348788-14348820)
chr7 (10-46)||(21519210-21519246)
chr7 (9-73)||(45185629-45185692)
chr7 (1-44)||(21231999-21232041)
chr7 (408-457)||(3857953-3858003)
chr7 (9-39)||(14581414-14581444)
chr7 (88-142)||(16475929-16475983)
chr7 (325-415)||(29181690-29181780)
chr7 (1-39)||(31154537-31154575)
chr7 (2-39)||(11220081-11220118)
chr7 (5-42)||(13678504-13678541)
chr7 (9-42)||(14255691-14255724)
chr7 (1-42)||(14281612-14281652)
chr7 (1-38)||(14945836-14945872)
chr7 (1-42)||(15338995-15339035)
chr7 (1-38)||(15373429-15373465)
chr7 (1-38)||(15437572-15437609)
chr7 (1-42)||(15710959-15710999)
chr7 (1-42)||(15723183-15723223)
chr7 (9-38)||(32771677-32771706)
chr7 (1-42)||(35962704-35962744)
chr7 (9-45)||(124431-124467)
chr7 (358-406)||(2966383-2966431)
chr7 (9-45)||(8776164-8776200)
chr7 (408-456)||(12710435-12710483)
chr7 (83-127)||(13318007-13318051)
chr7 (9-45)||(15725572-15725608)
chr7 (9-45)||(16006219-16006255)
chr7 (9-45)||(17506044-17506080)
chr7 (9-45)||(17547134-17547170)
chr7 (358-406)||(20907038-20907086)
chr7 (9-45)||(21743567-21743603)
chr7 (9-41)||(23442400-23442432)
chr7 (9-45)||(38828049-38828085)
[»] chr4 (60 HSPs)
chr4 (18-459)||(8046420-8046889)
chr4 (339-462)||(15407485-15407608)
chr4 (323-425)||(14486052-14486154)
chr4 (83-140)||(14555881-14555938)
chr4 (234-374)||(11847397-11847537)
chr4 (1-46)||(14048371-14048416)
chr4 (222-285)||(14485975-14486037)
chr4 (322-459)||(53483022-53483171)
chr4 (1-42)||(17176535-17176576)
chr4 (313-415)||(16147412-16147514)
chr4 (9-67)||(30237929-30237987)
chr4 (1-42)||(2585135-2585176)
chr4 (240-352)||(8834185-8834297)
chr4 (1-38)||(12932012-12932049)
chr4 (1-38)||(15360792-15360829)
chr4 (1-42)||(16147730-16147771)
chr4 (289-406)||(27905613-27905729)
chr4 (292-384)||(15244566-15244658)
chr4 (1-39)||(40908754-40908792)
chr4 (9-42)||(13886848-13886881)
chr4 (9-42)||(13887714-13887747)
chr4 (9-42)||(15244281-15244314)
chr4 (1-46)||(15533954-15533998)
chr4 (1-38)||(18166255-18166292)
chr4 (1-42)||(18212307-18212347)
chr4 (91-192)||(18212523-18212623)
chr4 (9-42)||(18261479-18261512)
chr4 (9-42)||(18271444-18271477)
chr4 (9-42)||(27849437-27849470)
chr4 (1-42)||(30146937-30146978)
chr4 (9-65)||(4831031-4831087)
chr4 (9-65)||(4834326-4834382)
chr4 (9-45)||(31117292-31117328)
chr4 (1-44)||(1651021-1651064)
chr4 (242-414)||(13887086-13887258)
chr4 (242-414)||(13887943-13888115)
chr4 (9-67)||(14821536-14821594)
chr4 (8-42)||(14910824-14910858)
chr4 (240-384)||(15307415-15307563)
chr4 (1-39)||(15407081-15407118)
chr4 (1-39)||(53905283-53905321)
chr4 (9-42)||(8833954-8833987)
chr4 (9-38)||(10972873-10972902)
chr4 (1-38)||(14485681-14485717)
chr4 (1-38)||(14910756-14910792)
chr4 (9-42)||(15307183-15307216)
chr4 (1-42)||(16156804-16156844)
chr4 (1-38)||(16229088-16229125)
chr4 (1-42)||(17000134-17000174)
chr4 (1-42)||(23121769-23121809)
chr4 (13-42)||(26077678-26077707)
chr4 (1-38)||(41529054-41529091)
chr4 (9-45)||(4170827-4170863)
chr4 (1-37)||(14063080-14063116)
chr4 (9-45)||(14698519-14698555)
chr4 (10-42)||(15075466-15075498)
chr4 (10-46)||(15318099-15318135)
chr4 (9-45)||(41791473-41791509)
chr4 (9-45)||(53387977-53388013)
chr4 (9-45)||(55502987-55503023)
[»] scaffold0117 (1 HSPs)
scaffold0117 (18-456)||(9167-9624)
[»] chr8 (47 HSPs)
chr8 (18-415)||(23865619-23866026)
chr8 (18-131)||(19902808-19902920)
chr8 (339-462)||(14057148-14057271)
chr8 (339-462)||(25111385-25111508)
chr8 (85-140)||(19987990-19988045)
chr8 (125-417)||(18613409-18613697)
chr8 (289-415)||(24321252-24321376)
chr8 (1-42)||(21683654-21683695)
chr8 (1-42)||(21688003-21688044)
chr8 (1-39)||(8728979-8729017)
chr8 (1-39)||(10607103-10607141)
chr8 (1-39)||(19859681-19859719)
chr8 (240-409)||(21931018-21931187)
chr8 (1-67)||(22743876-22743942)
chr8 (1-38)||(21690400-21690437)
chr8 (1-42)||(24321567-24321608)
chr8 (1-38)||(36445719-36445756)
chr8 (13-72)||(21282240-21282300)
chr8 (1-37)||(21300114-21300150)
chr8 (4-74)||(20839856-20839927)
chr8 (1-67)||(21322200-21322267)
chr8 (8-42)||(8728916-8728950)
chr8 (9-67)||(20005563-20005621)
chr8 (9-42)||(20012146-20012179)
chr8 (1-38)||(20783840-20783877)
chr8 (1-42)||(22063554-22063594)
chr8 (1-42)||(22176026-22176066)
chr8 (9-42)||(39363663-39363696)
chr8 (10-46)||(15267297-15267333)
chr8 (10-46)||(22521829-22521865)
chr8 (408-459)||(17054009-17054060)
chr8 (1-67)||(21326788-21326855)
chr8 (13-44)||(25111022-25111053)
chr8 (13-106)||(17053778-17053870)
chr8 (89-139)||(20005423-20005473)
chr8 (9-74)||(23652916-23652982)
chr8 (1-39)||(41009428-41009466)
chr8 (9-38)||(20006401-20006430)
chr8 (1-42)||(22025551-22025591)
chr8 (9-45)||(7301316-7301352)
chr8 (9-45)||(17795222-17795258)
chr8 (5-53)||(21669031-21669078)
chr8 (1-37)||(22177755-22177790)
chr8 (10-42)||(23647529-23647561)
chr8 (408-456)||(23866030-23866078)
chr8 (9-45)||(28853776-28853812)
chr8 (9-45)||(45135189-45135225)
[»] scaffold1773 (2 HSPs)
scaffold1773 (146-415)||(324-592)
scaffold1773 (18-131)||(157-269)
[»] scaffold0247 (1 HSPs)
scaffold0247 (240-459)||(10610-10829)
[»] scaffold0249 (4 HSPs)
scaffold0249 (83-234)||(7517-7667)
scaffold0249 (1-42)||(14763-14804)
scaffold0249 (1-74)||(7742-7814)
scaffold0249 (1-42)||(6748-6789)
[»] scaffold0154 (2 HSPs)
scaffold0154 (235-424)||(30194-30383)
scaffold0154 (13-42)||(29927-29956)
[»] scaffold0053 (4 HSPs)
scaffold0053 (127-384)||(81826-82082)
scaffold0053 (313-415)||(80072-80174)
scaffold0053 (1-42)||(80390-80431)
scaffold0053 (9-42)||(72869-72902)
[»] scaffold0004 (7 HSPs)
scaffold0004 (125-441)||(116052-116366)
scaffold0004 (240-428)||(129204-129393)
scaffold0004 (1-42)||(129656-129697)
scaffold0004 (8-42)||(129592-129626)
scaffold0004 (10-46)||(384269-384305)
scaffold0004 (1-39)||(326942-326980)
scaffold0004 (1-37)||(115905-115941)
[»] scaffold0028 (5 HSPs)
scaffold0028 (100-428)||(65265-65592)
scaffold0028 (1-39)||(65140-65178)
scaffold0028 (146-208)||(1274-1336)
scaffold0028 (9-42)||(1137-1170)
scaffold0028 (9-42)||(92629-92662)
[»] chr5 (82 HSPs)
chr5 (13-459)||(23527630-23528099)
chr5 (83-140)||(22232436-22232493)
chr5 (253-417)||(18408521-18408685)
chr5 (1-42)||(20780863-20780904)
chr5 (1-42)||(22336359-22336400)
chr5 (1-42)||(22339897-22339938)
chr5 (1-42)||(22466897-22466938)
chr5 (1-42)||(37599170-37599211)
chr5 (1-42)||(37599251-37599292)
chr5 (1-42)||(42960332-42960373)
chr5 (335-415)||(19236294-19236374)
chr5 (1-41)||(22336278-22336318)
chr5 (1-41)||(22339816-22339856)
chr5 (364-423)||(22439310-22439369)
chr5 (289-396)||(22460506-22460611)
chr5 (1-74)||(6404428-6404502)
chr5 (9-67)||(10035296-10035354)
chr5 (1-39)||(18408968-18409006)
chr5 (9-67)||(18819087-18819145)
chr5 (1-39)||(24668959-24668997)
chr5 (1-39)||(24738728-24738766)
chr5 (1-39)||(24751497-24751535)
chr5 (5-42)||(427395-427432)
chr5 (1-42)||(19236018-19236059)
chr5 (1-42)||(20772088-20772129)
chr5 (1-42)||(20843317-20843358)
chr5 (1-38)||(21829675-21829712)
chr5 (9-66)||(21869490-21869547)
chr5 (9-66)||(21873770-21873827)
chr5 (1-42)||(22749925-22749966)
chr5 (1-42)||(28371309-28371350)
chr5 (1-38)||(38145642-38145679)
chr5 (289-397)||(34829432-34829539)
chr5 (1-39)||(6728228-6728266)
chr5 (1-39)||(20819301-20819339)
chr5 (1-39)||(20826401-20826439)
chr5 (9-67)||(21901800-21901858)
chr5 (1-74)||(22232568-22232641)
chr5 (289-415)||(22467130-22467254)
chr5 (8-42)||(22749996-22750030)
chr5 (1-39)||(28896999-28897037)
chr5 (1-39)||(28910247-28910285)
chr5 (1-39)||(28931939-28931977)
chr5 (1-39)||(28933442-28933480)
chr5 (1-39)||(28946642-28946680)
chr5 (9-42)||(21624710-21624743)
chr5 (1-42)||(22007888-22007928)
chr5 (1-42)||(22460273-22460314)
chr5 (1-38)||(23561577-23561614)
chr5 (1-42)||(24930825-24930866)
chr5 (9-42)||(28371390-28371423)
chr5 (1-46)||(37805280-37805324)
chr5 (9-42)||(38145719-38145752)
chr5 (9-42)||(42960259-42960292)
chr5 (9-41)||(15193995-15194027)
chr5 (10-42)||(17022824-17022856)
chr5 (9-65)||(23538979-23539035)
chr5 (297-388)||(20781102-20781192)
chr5 (125-192)||(23112480-23112546)
chr5 (13-44)||(23112702-23112733)
chr5 (409-459)||(20819639-20819689)
chr5 (409-459)||(20826739-20826789)
chr5 (9-67)||(25013736-25013794)
chr5 (1-39)||(28890295-28890333)
chr5 (1-42)||(758219-758259)
chr5 (1-42)||(20937764-20937804)
chr5 (9-42)||(21495077-21495110)
chr5 (9-42)||(21888731-21888764)
chr5 (1-42)||(22312796-22312836)
chr5 (1-42)||(22509137-22509177)
chr5 (1-38)||(34829200-34829236)
chr5 (9-65)||(10816952-10817008)
chr5 (238-270)||(20819456-20819488)
chr5 (238-270)||(20826556-20826588)
chr5 (335-415)||(28889978-28890058)
chr5 (335-415)||(28896682-28896762)
chr5 (335-415)||(28909930-28910010)
chr5 (335-415)||(28931622-28931702)
chr5 (335-415)||(28946325-28946405)
chr5 (9-45)||(29325504-29325540)
chr5 (9-45)||(43121001-43121037)
chr5 (9-45)||(43124534-43124570)
[»] scaffold0461 (4 HSPs)
scaffold0461 (290-462)||(581-752)
scaffold0461 (290-374)||(7605-7688)
scaffold0461 (1-39)||(1024-1062)
scaffold0461 (1-39)||(7960-7998)
[»] scaffold0139 (2 HSPs)
scaffold0139 (125-463)||(15521-15856)
scaffold0139 (1-39)||(15966-16004)
[»] scaffold0025 (4 HSPs)
scaffold0025 (323-456)||(14977-15121)
scaffold0025 (1-42)||(76890-76931)
scaffold0025 (1-42)||(71259-71299)
scaffold0025 (16-44)||(15422-15450)
[»] scaffold0138 (2 HSPs)
scaffold0138 (240-384)||(1117-1261)
scaffold0138 (9-42)||(885-918)
[»] chr1 (50 HSPs)
chr1 (290-462)||(18712098-18712270)
chr1 (275-415)||(41111214-41111354)
chr1 (13-131)||(41110995-41111112)
chr1 (83-140)||(20941657-20941714)
chr1 (289-415)||(21710167-21710292)
chr1 (223-374)||(19961472-19961622)
chr1 (240-411)||(22030333-22030504)
chr1 (289-415)||(20851714-20851838)
chr1 (289-415)||(21705625-21705749)
chr1 (1-42)||(13226881-13226922)
chr1 (1-42)||(15316470-15316511)
chr1 (1-42)||(16371708-16371749)
chr1 (1-42)||(16371789-16371830)
chr1 (322-415)||(20858341-20858434)
chr1 (1-39)||(11157180-11157218)
chr1 (125-353)||(11157328-11157554)
chr1 (1-74)||(16883473-16883547)
chr1 (1-74)||(21410607-21410681)
chr1 (1-39)||(29554414-29554452)
chr1 (1-39)||(32650271-32650309)
chr1 (1-38)||(19666701-19666738)
chr1 (1-38)||(20849199-20849236)
chr1 (1-42)||(20852030-20852071)
chr1 (1-42)||(20858656-20858697)
chr1 (1-38)||(21664333-21664370)
chr1 (1-42)||(21705393-21705434)
chr1 (1-38)||(21732646-21732683)
chr1 (9-73)||(23631136-23631200)
chr1 (1-67)||(19778400-19778467)
chr1 (1-74)||(20941789-20941862)
chr1 (8-42)||(32650338-32650372)
chr1 (1-38)||(19853204-19853241)
chr1 (1-38)||(19859339-19859376)
chr1 (9-42)||(20108496-20108529)
chr1 (1-38)||(23195443-23195480)
chr1 (88-192)||(20438224-20438327)
chr1 (13-44)||(19664095-19664126)
chr1 (9-67)||(21698276-21698335)
chr1 (9-39)||(20086449-20086479)
chr1 (9-42)||(7792769-7792802)
chr1 (1-38)||(19961306-19961342)
chr1 (13-42)||(20242714-20242743)
chr1 (1-42)||(21709934-21709975)
chr1 (9-38)||(22030704-22030733)
chr1 (1-42)||(23066668-23066708)
chr1 (9-38)||(30491407-30491436)
chr1 (408-457)||(41111358-41111407)
chr1 (9-45)||(20579291-20579327)
chr1 (9-45)||(20586984-20587020)
chr1 (10-42)||(24475494-24475526)
[»] scaffold1061 (1 HSPs)
scaffold1061 (1-353)||(1460-1813)
[»] scaffold0124 (6 HSPs)
scaffold0124 (313-462)||(34861-35010)
scaffold0124 (1-38)||(45068-45105)
scaffold0124 (1-44)||(36783-36825)
scaffold0124 (1-38)||(9398-9435)
scaffold0124 (8-42)||(36724-36758)
scaffold0124 (1-39)||(43962-44000)
[»] scaffold0235 (2 HSPs)
scaffold0235 (290-449)||(15475-15633)
scaffold0235 (313-449)||(23192-23328)
[»] scaffold0317 (2 HSPs)
scaffold0317 (125-384)||(542-799)
scaffold0317 (5-42)||(397-434)
[»] scaffold0310 (1 HSPs)
scaffold0310 (339-456)||(6907-7024)
[»] scaffold0077 (3 HSPs)
scaffold0077 (325-453)||(4153-4281)
scaffold0077 (83-135)||(17972-18024)
scaffold0077 (83-135)||(23605-23657)
[»] scaffold0001 (6 HSPs)
scaffold0001 (20-131)||(174440-174551)
scaffold0001 (223-374)||(493650-493800)
scaffold0001 (1-38)||(96018-96055)
scaffold0001 (9-42)||(493924-493957)
scaffold0001 (240-384)||(525062-525205)
scaffold0001 (9-38)||(488350-488379)
[»] scaffold0222 (1 HSPs)
scaffold0222 (253-417)||(16083-16247)
[»] scaffold0085 (2 HSPs)
scaffold0085 (289-415)||(4253-4377)
scaffold0085 (1-42)||(4568-4609)
[»] scaffold0020 (1 HSPs)
scaffold0020 (125-425)||(102489-102787)
[»] scaffold0348 (4 HSPs)
scaffold0348 (83-140)||(1527-1584)
scaffold0348 (1-42)||(8475-8516)
scaffold0348 (1-74)||(1659-1732)
scaffold0348 (13-73)||(3102-3163)
[»] scaffold0476 (2 HSPs)
scaffold0476 (313-417)||(3871-3975)
scaffold0476 (12-44)||(4265-4297)
[»] scaffold0090 (1 HSPs)
scaffold0090 (266-417)||(17492-17643)
[»] scaffold0261 (4 HSPs)
scaffold0261 (223-388)||(24178-24342)
scaffold0261 (9-42)||(10622-10655)
scaffold0261 (9-42)||(18801-18834)
scaffold0261 (1-38)||(24472-24508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (240-409)||(121200-121369)
scaffold0031 (240-409)||(132077-132246)
[»] scaffold0232 (1 HSPs)
scaffold0232 (240-347)||(19059-19166)
[»] scaffold0106 (4 HSPs)
scaffold0106 (1-80)||(46685-46765)
scaffold0106 (1-80)||(50958-51038)
scaffold0106 (1-42)||(28770-28811)
scaffold0106 (9-42)||(36364-36397)
[»] scaffold0034 (5 HSPs)
scaffold0034 (223-406)||(72565-72747)
scaffold0034 (1-38)||(400-437)
scaffold0034 (1-38)||(6559-6596)
scaffold0034 (1-42)||(10072-10112)
scaffold0034 (13-42)||(17368-17397)
[»] scaffold0107 (2 HSPs)
scaffold0107 (339-462)||(41113-41236)
scaffold0107 (1-44)||(41582-41624)
[»] scaffold1469 (1 HSPs)
scaffold1469 (1-42)||(473-514)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-42)||(574-615)
[»] scaffold0720 (2 HSPs)
scaffold0720 (1-42)||(4158-4199)
scaffold0720 (289-424)||(3831-3966)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-42)||(4972-5013)
[»] scaffold0544 (2 HSPs)
scaffold0544 (1-42)||(2733-2774)
scaffold0544 (1-42)||(2814-2855)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-42)||(25757-25798)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-42)||(5091-5132)
scaffold0120 (8-42)||(5027-5061)
[»] scaffold0089 (1 HSPs)
scaffold0089 (1-42)||(2115-2156)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-39)||(3297-3335)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-39)||(16861-16899)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-39)||(8647-8685)
[»] scaffold0108 (1 HSPs)
scaffold0108 (9-67)||(45682-45740)
[»] scaffold0094 (2 HSPs)
scaffold0094 (248-353)||(51552-51657)
scaffold0094 (1-42)||(51306-51347)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-42)||(2301-2342)
[»] scaffold0483 (2 HSPs)
scaffold0483 (223-374)||(11631-11782)
scaffold0483 (1-38)||(11912-11948)
[»] scaffold0453 (2 HSPs)
scaffold0453 (1-42)||(11449-11490)
scaffold0453 (223-352)||(11196-11324)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-38)||(18675-18712)
[»] scaffold0298 (2 HSPs)
scaffold0298 (1-38)||(8410-8447)
scaffold0298 (1-38)||(18494-18531)
[»] scaffold0243 (3 HSPs)
scaffold0243 (1-38)||(7997-8034)
scaffold0243 (1-38)||(12303-12340)
scaffold0243 (1-38)||(16017-16054)
[»] scaffold0205 (1 HSPs)
scaffold0205 (1-38)||(27412-27449)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-38)||(6811-6848)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-42)||(44362-44403)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-38)||(47790-47827)
scaffold0114 (1-37)||(42100-42135)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-38)||(3043-3080)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-38)||(10618-10655)
scaffold0035 (10-42)||(743-775)
[»] scaffold0011 (9 HSPs)
scaffold0011 (1-38)||(154301-154338)
scaffold0011 (1-38)||(252057-252094)
scaffold0011 (13-72)||(152541-152601)
scaffold0011 (1-38)||(56734-56771)
scaffold0011 (1-38)||(75305-75342)
scaffold0011 (1-38)||(197409-197446)
scaffold0011 (1-38)||(258663-258700)
scaffold0011 (9-42)||(21715-21748)
scaffold0011 (1-34)||(147180-147213)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-37)||(5717-5753)
[»] scaffold0337 (2 HSPs)
scaffold0337 (88-192)||(9950-10053)
scaffold0337 (1-42)||(10226-10266)
[»] scaffold0207 (1 HSPs)
scaffold0207 (10-46)||(8767-8803)
[»] scaffold0167 (2 HSPs)
scaffold0167 (9-73)||(20015-20079)
scaffold0167 (4-74)||(7113-7184)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-37)||(57154-57190)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-37)||(141443-141479)
[»] scaffold1427 (2 HSPs)
scaffold1427 (1-44)||(1009-1051)
scaffold1427 (125-192)||(1207-1273)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-44)||(133-175)
[»] scaffold0506 (1 HSPs)
scaffold0506 (1-67)||(8582-8649)
[»] scaffold0010 (2 HSPs)
scaffold0010 (4-74)||(44049-44120)
scaffold0010 (4-74)||(49115-49186)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-39)||(5872-5910)
[»] scaffold0326 (2 HSPs)
scaffold0326 (8-42)||(296-330)
scaffold0326 (1-39)||(359-397)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-39)||(3380-3418)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-39)||(17073-17111)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-39)||(17396-17434)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-74)||(56032-56106)
[»] scaffold0049 (2 HSPs)
scaffold0049 (9-67)||(42875-42933)
scaffold0049 (9-42)||(45090-45123)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-39)||(171780-171818)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-39)||(34948-34986)
[»] scaffold1853 (1 HSPs)
scaffold1853 (9-74)||(737-802)
[»] scaffold1584 (1 HSPs)
scaffold1584 (1-42)||(492-532)
[»] scaffold0405 (1 HSPs)
scaffold0405 (1-38)||(3267-3304)
[»] scaffold0323 (1 HSPs)
scaffold0323 (1-42)||(7419-7459)
[»] scaffold0206 (1 HSPs)
scaffold0206 (313-374)||(18060-18121)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-38)||(9411-9448)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-42)||(51668-51708)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-42)||(20485-20525)
scaffold0023 (358-415)||(134867-134924)
scaffold0023 (2-39)||(153311-153347)
scaffold0023 (289-353)||(134820-134882)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-38)||(38636-38673)
scaffold0022 (1-38)||(136696-136733)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-38)||(370557-370594)
[»] scaffold1336 (1 HSPs)
scaffold1336 (10-42)||(789-821)
[»] scaffold0169 (1 HSPs)
scaffold0169 (240-284)||(6299-6343)
[»] scaffold0069 (2 HSPs)
scaffold0069 (10-46)||(29376-29412)
scaffold0069 (10-46)||(34614-34650)
[»] scaffold0021 (2 HSPs)
scaffold0021 (9-65)||(146745-146801)
scaffold0021 (1-42)||(141494-141534)
[»] scaffold0535 (1 HSPs)
scaffold0535 (13-67)||(5972-6027)
[»] scaffold0395 (2 HSPs)
scaffold0395 (9-40)||(4089-4120)
scaffold0395 (10-45)||(9887-9922)
[»] scaffold1290 (2 HSPs)
scaffold1290 (9-39)||(1192-1222)
scaffold1290 (9-38)||(1236-1265)
[»] scaffold0244 (1 HSPs)
scaffold0244 (9-67)||(13780-13838)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-39)||(141-179)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-74)||(44755-44829)
scaffold0102 (9-42)||(29985-30018)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-39)||(28032-28070)
[»] scaffold0081 (2 HSPs)
scaffold0081 (9-39)||(55868-55898)
scaffold0081 (9-38)||(55912-55941)
[»] scaffold0005 (1 HSPs)
scaffold0005 (9-67)||(18115-18173)
[»] scaffold0924 (2 HSPs)
scaffold0924 (9-38)||(2433-2462)
scaffold0924 (408-456)||(1343-1391)
[»] scaffold0669 (1 HSPs)
scaffold0669 (9-42)||(1747-1780)
[»] scaffold0661 (1 HSPs)
scaffold0661 (9-38)||(4058-4087)
[»] scaffold0516 (1 HSPs)
scaffold0516 (9-38)||(6308-6337)
[»] scaffold0490 (1 HSPs)
scaffold0490 (9-42)||(4923-4956)
[»] scaffold0434 (1 HSPs)
scaffold0434 (9-38)||(1323-1352)
[»] scaffold0377 (2 HSPs)
scaffold0377 (13-42)||(3372-3401)
scaffold0377 (13-42)||(7411-7440)
[»] scaffold0309 (2 HSPs)
scaffold0309 (9-42)||(6005-6038)
scaffold0309 (9-42)||(8157-8190)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-42)||(14464-14504)
[»] scaffold0211 (1 HSPs)
scaffold0211 (9-38)||(9512-9541)
[»] scaffold0178 (1 HSPs)
scaffold0178 (9-42)||(25646-25679)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-42)||(17647-17687)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-38)||(61985-62014)
[»] scaffold0012 (1 HSPs)
scaffold0012 (9-42)||(223496-223529)
[»] scaffold0007 (1 HSPs)
scaffold0007 (9-38)||(207714-207743)
[»] scaffold0585 (1 HSPs)
scaffold0585 (10-46)||(8499-8535)
[»] scaffold0525 (1 HSPs)
scaffold0525 (9-45)||(8972-9008)
[»] scaffold0480 (1 HSPs)
scaffold0480 (10-38)||(577-605)
[»] scaffold0335 (1 HSPs)
scaffold0335 (240-284)||(3328-3372)
[»] scaffold0322 (1 HSPs)
scaffold0322 (10-38)||(19457-19485)
[»] scaffold0253 (1 HSPs)
scaffold0253 (10-46)||(5360-5396)
[»] scaffold0006 (1 HSPs)
scaffold0006 (408-456)||(49597-49645)


Alignment Details
Target: scaffold0026 (Bit Score: 277; Significance: 1e-155; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 12885 - 12534
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactccgaaaattctaacaatccagaacataca 100  Q
    |||||||| || | || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||    
T  12885 atgcaactaacccaacctgtgtatatctacatacaactcaactacacatatatctcatatgacttactactccgagagttctaacaatccagaacataca 12786  T
Q  101 caattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaacc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  12785 caattaattataattatgcgcatacatcaatttcattcaatag-ttatacattcacttgatttcttactcaatcatctccaaaattcactaacatcaacc 12687  T
Q  201 aattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12686 aattcgatcaccggcttgttctagtaggattctgatacctatacaagggatatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgc 12587  T
Q  301 acgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 353  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  12586 acgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 364 - 459
Target Start/End: Complemental strand, 12543 - 12437
Alignment:
Q  364 cttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct-----------tgagcgaacttctaacagaatcaaaacggtttttcgc 452  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||           ||||||||||||| |||||||||||| ||||||||||    
T  12543 cttaagcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgc 12444  T
Q  453 tcacagg 459  Q
    |||||||    
T  12443 tcacagg 12437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 110364 - 110405
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  110364 atgcaactgactccacttgtgtatatctacatacaactcaac 110405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 110445 - 110486
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  110445 atgcaactgactccacttgtgtatatctacatacaactcaac 110486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 142811 - 142844
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  142811 gactcaacttgtgtatatctacatacaactcaac 142844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 424
Target Start/End: Original strand, 2751 - 3156
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||| || | | |||||||||||||||| ||||||| |||||||||    
T  2751 tgtgtatatctacatacaactcaactaatacatatgtttcatatgacttactactccgcaact-caaacaatccagaacatagacaattatttataatta 2849  T
Q  117 tgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagct 216  Q
    ||| |||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||||| |||    
T  2850 tgcgcatacatcaaattcattcaataa-ttatatattcacatgatttcaaactcaatcatctccaatattcactaacatcaaccaattcgatcaccggct 2948  T
Q  217 tgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaattca 316  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  2949 tgttctagtgggattctggtacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttca 3048  T
Q  317 aaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgctt 416  Q
     |||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||  ||||||| |  ||||||||    
T  3049 gaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggtttcgctcgctcacagttcgctt 3148  T
Q  417 gagcgaac 424  Q
    ||||||||    
T  3149 gagcgaac 3156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 456
Target Start/End: Original strand, 26582860 - 26583313
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||||||||||||||||| || | | |||||||||||||||||||||||| |||||||||    
T  26582860 tgtgtatatctacatacaacttaactattacatatgttttatatgacttactactccgcaact-caaacaatccagaacatacacaattatttataatta 26582958  T
Q  117 tgcacatacatcaatttcattcaataaattat----atattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcacc 212  Q
    ||| |||||||||||  ||||| | |  ||||    ||||||||| ||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||    
T  26582959 tgcgcatacatcaatcacattccacatgttatgtatatattcactcgatttcatactcaatcatctccaacatttactaacaccaatcaattcgatcacc 26583058  T
Q  213 agcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaa 312  Q
     ||| |||||| ||||| || | |||||| || |||||||||| ||||||| |||| ||| ||||||||||||||||||||||| |||||||| |||||     
T  26583059 ggctagttctaataggagtcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcctgcacgaaacaaaag 26583158  T
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctt------- 405  Q
    |||| ||  |||||||||||| || |||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| ||||||||           
T  26583159 ttcagaagaaggctgactaagacttacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacgggtc 26583258  T
Q  406 ----agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
        | ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  26583259 gctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 26583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 352
Target Start/End: Complemental strand, 23169289 - 23168954
Alignment:
Q  19 gtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataattat 117  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||||||| || | | |||||||||| ||||||||||| | ||||||||||    
T  23169289 gtgtatatccacatacaactccactaatacatatatttcatataacttactactccgcaact-caaacaatccagcacatacacaatcatttataattat 23169191  T
Q  118 gcacatacatcaatttcattcaataaattatat--attcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagc 215  Q
    || ||||||||| |  ||||| | |  ||||||  |||||| ||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||     
T  23169190 gcgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatcaccaga 23169091  T
Q  216 ttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaaatt 314  Q
     |||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| | ||| |  ||||||| || |||||| | ||  ||    
T  23169090 gtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-aatttt 23168992  T
Q  315 caaaaagaggctgactaaggctcacttcgcttaagcga 352  Q
    || |||||||||||||||| ||||  ||||||||||||    
T  23168991 cagaaagaggctgactaagcctcagctcgcttaagcga 23168954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 352
Target Start/End: Complemental strand, 23580546 - 23580211
Alignment:
Q  19 gtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataattat 117  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||| ||||||||||||| || | | |||||||||| ||||||||||| | ||||||||||    
T  23580546 gtgtatatccacatacaactccactaatacatatatttcatataacttactactccgcaact-caaacaatccagcacatacacaatcatttataattat 23580448  T
Q  118 gcacatacatcaatttcattcaataaattatat--attcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagc 215  Q
    || ||||||||| |  ||||| | |  ||||||  |||||| ||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||     
T  23580447 gcgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatcaccaga 23580348  T
Q  216 ttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaaatt 314  Q
     |||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| | ||| |  ||||||| || |||||| | ||  ||    
T  23580347 gtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-aatttt 23580249  T
Q  315 caaaaagaggctgactaaggctcacttcgcttaagcga 352  Q
    || |||||||||||||||| ||||  ||||||||||||    
T  23580248 cagaaagaggctgactaagcctcagctcgcttaagcga 23580211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 425
Target Start/End: Complemental strand, 23089779 - 23089594
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| |  ||| |||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  23089779 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 23089681  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaact 425  Q
    |||||||||||||||    ||||| |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  23089680 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgcttgagcgaact 23089594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 125 - 384
Target Start/End: Original strand, 23062869 - 23063127
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttct-a 223  Q
    |||||| ||||||||| | | ||||| |||||| | ||||||||||||||||||| ||| ||||||||  ||||| |||||||| ||||   |||| | |    
T  23062869 catcaagttcattcaacatagtatatgttcactaggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaaagtgttttca 23062967  T
Q  224 gtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaaga 322  Q
    ||||||||| | |   |||| |||||||||||||||| || ||||||||||  ||||||||| | | ||||||  ||||||| |||||  |||||||||     
T  23062968 gtaggattcag-tgtatatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggcaaag-ttcaaaaagt 23063065  T
Q  323 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    ||||||||||||   |||||||||||||||| | | |||| |||||||||||||||||||||    
T  23063066 ggctgactaaggtcaacttcgcttaagcgacggctggttcgcttaagcgaccggcttacaga 23063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 240 - 453
Target Start/End: Complemental strand, 23102207 - 23101994
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| |  ||| |||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  23102207 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 23102109  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    |||||||||||||||    ||||| |||||| || |||||||||| | |||||||||||||||||||| ||||||||| ||||||||  |  ||||||||    
T  23102108 cttcgcttaagcgacgtccagttcgcttaagtgatcggcttacagtaagtctgggttctgctcgcttacggttcgcttaagcgaactcttggcagaatca 23102009  T
Q  439 aaacggtttttcgct 453  Q
    ||  |||||||||||    
T  23102008 aattggtttttcgct 23101994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 417
Target Start/End: Original strand, 23878325 - 23878425
Alignment:
Q  317 aaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    ||||| |||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  23878325 aaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 23878423  T
Q  416 tg 417  Q
    ||    
T  23878424 tg 23878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 428
Target Start/End: Original strand, 21907750 - 21907865
Alignment:
Q  313 ttcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggtt 411  Q
    ||||||||| |||||||||||| ||| ||||||||||||||  | |||||| |||||||||||||||||||||| ||  |||||| ||||||| | ||||    
T  21907750 ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttggggttccgctcgctaacggtt 21907848  T
Q  412 cgcttgagcgaacttct 428  Q
    ||||| |||||||||||    
T  21907849 cgcttaagcgaacttct 21907865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 374
Target Start/End: Original strand, 26884489 - 26884639
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||| |||||||||| |||||||||| |||| ||||||||| | ||| ||||| | | |||||| |||||||||||||   |||| ||||    
T  26884489 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaagg-ttcagaaag 26884586  T
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    ||||||||||||||||| |||||||||||||  | ||| || |||||||||||    
T  26884587 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgacc 26884639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 385
Target Start/End: Original strand, 24660876 - 24661021
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | |||||| ||||||||||  ||||||||||||| ||||||||||| |       
T  24660876 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaag-taaaattcaaaaagtggctgactaagacctt 24660974  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 385  Q
    ||| ||||||||||| | | | || ||||||||||||||| ||||||    
T  24660975 ctttgcttaagcgacggctggctcgcttaagcgaccggctcacagaa 24661021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 459
Target Start/End: Complemental strand, 5706759 - 5706610
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgctt-----------aggg 409  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||| |||||| || | ||||||           | ||    
T  5706759 aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacgg 5706660  T
Q  410 ttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||    
T  5706659 ttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 5706610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 29281368 - 29281470
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| |||||||||||| | ||||||| || ||    
T  29281368 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 29281467  T
Q  413 gct 415  Q
    |||    
T  29281468 gct 29281470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 396
Target Start/End: Complemental strand, 25181606 - 25181501
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||||||||||||| | |||| ||| |||||||||||  |||| |||||||||||||| | |||||  ||||||||||| |||||||| ||||    
T  25181606 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacactcagttcgcttaagcgacggctagtttgcttaagcgaccagcttacagtaggt 25181509  T
Q  389 ctgggttc 396  Q
    ||||||||    
T  25181508 ctgggttc 25181501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 462
Target Start/End: Original strand, 23264515 - 23264613
Alignment:
Q  364 cttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacaggttc 462  Q
    |||||||||||||||||||||  ||| |||||  ||||||| | ||||||||||||||||||||| ||| ||| |||| | ||||||||| || |||||    
T  23264515 cttaagcgaccggcttacagagagtcggggtttcgctcgctaacggttcgcttgagcgaacttctgacataatgaaaatgatttttcgcttacgggttc 23264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6261473 - 6261432
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6261473 atgcaactgactccacttgtgtatatctacatacaactcaac 6261432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19662749 - 19662708
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19662749 atgcaactgactccacttgtgtatatctacatacaactcaac 19662708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19662830 - 19662789
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19662830 atgcaactgactccacttgtgtatatctacatacaactcaac 19662789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24660636 - 24660677
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24660636 atgcaactgactccacttgtgtatatctacatacaactcaac 24660677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27208650 - 27208609
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27208650 atgcaactgactccacttgtgtatatctacatacaactcaac 27208609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27210985 - 27210944
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27210985 atgcaactgactccacttgtgtatatctacatacaactcaac 27210944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24943547 - 24943585
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24943547 atgcaactgactccacttgtgtatatctacatacaactc 24943585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9693 - 9734
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  9693 atgcaactgactccacttgtgtatatctgcatacaactcaac 9734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 9957 - 10050
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||||| ||||  |||| || ||||||||||| | |||||| ||||||||||| |||||||| |||||||||||| | ||||||| || |||||    
T  9957 aggctgtctaacactcagtttgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgct 10050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8889972 - 8889935
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8889972 atgcaactgactccacttgtgtatatctacatacaact 8889935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20648245 - 20648282
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20648245 atgcaactgactccacttgtgtatatctacatacaact 20648282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22860475 - 22860516
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  22860475 atgcaactgactccacttgtgtatatttacatacaactcaac 22860516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25107474 - 25107437
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25107474 atgcaactgactccacttgtgtatatctacatacaact 25107437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25181838 - 25181797
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  25181838 atgcaactgactccacttgtgtatatctgcatacaactcaac 25181797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25267375 - 25267412
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25267375 atgcaactgactccacttgtgtatatctacatacaact 25267412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29281112 - 29281153
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  29281112 atgcaactgactccacttgtgtatatctgcatacaactcaac 29281153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21907419 - 21907455
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  21907419 atgcaactgactccacttgtgtatatctacatacaac 21907455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22796633 - 22796597
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  22796633 atgcaactgactccacttgtgtatatctacatacaac 22796597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 353
Target Start/End: Original strand, 23264301 - 23264524
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||| |||||||||| |||||||| ||| ||||||||  ||||| |||||||| ||||   |||| | |    
T  23264301 catcaagttcattcaacatagtatatgttcacttggtttcatactcgatcatctccaaa-ttcactaaactcaactaattcgattacca-agtgttttgg 23264398  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    |||||||  |     |||| || ||||||||||||| || | ||||||| | ||||||||| | | |||||| |||||||| || ||| ||||||||| |    
T  23264399 taggatttag---tgtatataaaggttatacaagttgaaaggaacatttaaaaatgctcaaaaggatcccctagtgcacgaggc-aaagttcaaaaagtg 23264494  T
Q  324 gctgactaaggctca-cttcgcttaagcgac 353  Q
    ||||||||||| ||| |||||||||||||||    
T  23264495 gctgactaagg-tcatcttcgcttaagcgac 23264524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 26884328 - 26884364
Alignment:
Q  6 actgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  26884328 actgactccacttgtgtatatctacatacaactcaac 26884364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 20914330 - 20914272
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||| ||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  20914330 gacttcacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 20914272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23062721 - 23062759
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  23062721 atgcaactgactccacttgtgtatatctgcatacaactc 23062759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23291096 - 23291170
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  23291096 atgcaactaactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 23291170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 6261546 - 6261513
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  6261546 gactccacttgtgtatatctacatacaactcaac 6261513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9241502 - 9241542
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  9241502 atgcaactgac-ccacttgtgtatatctacatacaactcaac 9241542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19649549 - 19649509
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  19649549 atgcaactgactc-acttgtgtatatctacatacaactcaac 19649509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20260992 - 20261036
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  20260992 atgcaactgac-ccacctgtgtatatctacatacaactcaactaca 20261036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22810052 - 22810092
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  22810052 atgcaactgac-ccacttgtgtatatctacatacaactcaac 22810092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23752961 - 23752998
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  23752961 atgcaactaactccacttgtgtatatctacatacaact 23752998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 38931555 - 38931522
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  38931555 gactccacttgtgtatatctacatacaactcaac 38931522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19703489 - 19703449
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaa 41  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  19703489 atgcaactaactccactggtgtatatctacatacaactcaa 19703449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 27208394 - 27208322
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 385  Q
    |||| ||| ||||||||||||||||| |||||||||||||  | ||| || ||||||||||| ||| ||||||    
T  27208394 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacagaa 27208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 27210729 - 27210657
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 385  Q
    |||| ||| ||||||||||||||||| |||||||||||||  | ||| || ||||||||||| ||| ||||||    
T  27210729 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacagaa 27210657  T

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Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 17634007 - 17634038
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactc 39  Q
    ||||||||||||||||||||||||||||||||    
T  17634007 tgactccacttgtgtatatctacatacaactc 17634038  T

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Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 23090027 - 23089996
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  23090027 ccacttgtgtatatctacatacaactcaacta 23089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 23102455 - 23102424
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  23102455 ccacttgtgtatatctacatacaactcaacta 23102424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 24652503 - 24652574
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||| ||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  24652503 caacagactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 24652574  T

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Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20724203 - 20724241
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  20724203 atgcaactaactccactggtgtatatctacatacaactc 20724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 24658947 - 24658981
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaact 38  Q
    ||||| |||||||||||||||||||||||||||||    
T  24658947 caacttactccacttgtgtatatctacatacaact 24658981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2105747 - 2105787
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  2105747 atgcaactgac-ccacttgtgtatatctacatacaacccaac 2105787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 21123872 - 21123839
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  21123872 gactcaacttgtgtatatctacatacaactcaac 21123839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 24669788 - 24669755
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  24669788 gactcaacttgtgtatatctacatacaactcaac 24669755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 20591404 - 20591368
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  20591404 gactcgacttgtgtatatcaacatacaactcaactac 20591368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21073987 - 21073951
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  21073987 atgcaattgaatccacttgtgtatatctacatacaac 21073951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 22841096 - 22841132
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||||||| || ||||||||||||||||||    
T  22841096 actccacttgtgtatgtcaacatacaactcaactaca 22841132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 23148712 - 23148740
Alignment:
Q  14 cacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||    
T  23148712 cacttgtgtatatctacatacaactcaac 23148740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23264152 - 23264188
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  23264152 atgcaacagactccactggtgtatatctacatacaac 23264188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 23560502 - 23560530
Alignment:
Q  14 cacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||    
T  23560502 cacttgtgtatatctacatacaactcaac 23560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 24504504 - 24504540
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  24504504 gactccacttgtgtatatcagcatacaactcaactac 24504540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 31503428 - 31503464
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  31503428 gactccacttgtgtatatcagcatacaactcaactac 31503464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 31505994 - 31506030
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  31505994 gactccacttgtgtatatcagcatacaactcaactac 31506030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 31755762 - 31755798
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  31755762 gactccacttgtgtatatcagcatacaactcaactac 31755798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 5e-94; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 18 - 456
Target Start/End: Complemental strand, 29615191 - 29614738
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||||||||| ||||| || |   |||||||||||||||||||||||| |||||||||    
T  29615191 tgtgtatatctacatacaactcgactattacatatgtttcatatgacttactgctccgcaactc--aacaatccagaacatacacaattatttataatta 29615094  T
Q  117 tgcacatacatcaatttcattcaataaattatatat--------tcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgat 208  Q
    | |||||||||||||  ||||| | |  ||||||||        ||||||| ||||||||||||||||||| || ||| ||||||| ||| |||||| ||    
T  29615093 ttcacatacatcaatcacattccacatgttatatatacacatattcacttgttttcatactcaatcatctccaacatttactaacaccaatcaattcaat 29614994  T
Q  209 caccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagca 308  Q
    |||| ||| |||||| || ||||||| ||||||| | |||||||||| |||||||||||| ||| ||||||||||||||||| ||||| |||||||| ||    
T  29614993 caccggctcgttctaataagattctgttacctatgccagggttatactagttaaaggaaatattatagaatgctcaagaagttccctcatgcacgaaaca 29614894  T
Q  309 aaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctt--- 405  Q
    ||| |||| |   |||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||| |||||||||||| ||||||||       
T  29614893 aaagttcaga---aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccgacttacagtaggtctgggttcagctcgcttacg 29614797  T
Q  406 --------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
            | ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  29614796 ggttgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 29614738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 99 - 428
Target Start/End: Original strand, 25396343 - 25396671
Alignment:
Q  99 cacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaa 198  Q
    |||||||||| ||||| || |  || |||||| |||||||||   | |||||||||||||| |||||||||||||||| || ||||||||||||  ||||    
T  25396343 cacaattaataataatcatactaatgcatcaagttcattcaacctagtatatattcacttggtttcatactcaatcatatccaaaattcactaaattcaa 25396442  T
Q  199 ccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcg 297  Q
    |||||||||| ||||   ||||  |||||||||| | | | ||||||||||||||||||||| || ||||||||||||||||||||| | | | |||| |    
T  25396443 ccaattcgattaccaatgtgtttcagtaggattcag-tgcatatacaagggttatacaagttgaaagaaacattttagaatgctcaaaaggattccctag 25396541  T
Q  298 tgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttct 397  Q
    ||||| |||| | ||||||||||| || |||||||| |  |||||||||||||||| | | | || |||||||||||| ||||||||  ||  ||||||     
T  25396542 tgcactaagc-ataattcaaaaagtggttgactaagacctacttcgcttaagcgacggctggctcgcttaagcgaccgacttacagagagttggggttcc 25396640  T
Q  398 gctcgcttagggttcgcttgagcgaacttct 428  Q
    ||||||| | ||||||||| || ||||||||    
T  25396641 gctcgctaacggttcgcttaagtgaacttct 25396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 245 - 423
Target Start/End: Original strand, 18799754 - 18799932
Alignment:
Q  245 aagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcg 343  Q
    |||||||||||||||| || | ||||| || ||||||| || | | ||||||  |||| || |||||  ||||||||| |||||||||||| | ||||||    
T  18799754 aagggttatacaagttgaaaggaacatgtttgaatgctaaaaagggtcccctaatgcatgaggcaaag-ttcaaaaagtggctgactaaggttgacttcg 18799852  T
Q  344 cttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaa 423  Q
    |||||||||| | |||||| |||||||||||||||||||| | |||||||||| ||||||||| ||||||||| ||||||    
T  18799853 cttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgcttacggttcgcttaagcgaa 18799932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 425
Target Start/End: Complemental strand, 21565936 - 21565751
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| | | || |||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  21565936 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtctcctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 21565838  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaact 425  Q
    |||||||||||||||    ||||| |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  21565837 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgcttgagcgaact 21565751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 19786868 - 19786751
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  19786868 ccacctgtgtatatctacatacaactcgactactacatatgtatcatatgacttactactcc-ataactcaaacaatccaga-cttacacaattatttat 19786771  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  19786770 aattatgcacatacatcaat 19786751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 275 - 459
Target Start/End: Original strand, 12167637 - 12167832
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  12167637 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 12167735  T
Q  375 ggcttacagaagg-tctgggttctgctcgctt-----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
     |||||||| ||| ||||||||| | ||||||           | |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  12167736 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 12167832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 275 - 459
Target Start/End: Original strand, 19286546 - 19286741
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19286546 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19286644  T
Q  375 ggcttacagaagg-tctgggttctgctcgctt-----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
     |||||||| ||| ||||||||| | ||||||           | |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  19286645 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19286741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 415
Target Start/End: Original strand, 19877730 - 19877870
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19877730 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19877828  T
Q  375 ggcttacagaagg-tctgggttctgctcgcttagggttcgct 415  Q
     |||||||| ||| ||||||||| | ||||||| || |||||    
T  19877829 agcttacagtaggttctgggttcagttcgcttacgggtcgct 19877870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 12167418 - 12167535
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  12167418 ccacctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttat 12167515  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  12167516 aattatgcacatacatcaat 12167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 19877511 - 19877628
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  19877511 ccacctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttat 19877608  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  19877609 aattatgcacatacatcaat 19877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 19883287 - 19883404
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  19883287 ccacctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttat 19883384  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  19883385 aattatgcacatacatcaat 19883404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 459
Target Start/End: Original strand, 19883506 - 19883701
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||| | ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19883506 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctaattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19883604  T
Q  375 ggcttacagaagg-tctgggttctgctcgctt-----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
     |||||||| ||| ||||||||| | ||||||           | |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  19883605 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19883701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 425
Target Start/End: Complemental strand, 19300509 - 19300308
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||||| || | ||| ||||| | | |||||| ||||||||||||||  |||| | ||    
T  19300509 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacttaaaaatactcaaaagggtcccctagtgcacgaagcaaag-ttcagatag 19300412  T
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttct-gctcgcttagggttcgcttgagc 420  Q
    |||||||||||||||||  ||||||||||||  | ||| || ||||||||||| || ||||| | || ||| |||| ||||||| | |||||||| ||||    
T  19300411 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggttcgctcgagc 19300313  T
Q  421 gaact 425  Q
    |||||    
T  19300312 gaact 19300308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 19286327 - 19286444
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | | ||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  19286327 ccacctgtgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttat 19286424  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  19286425 aattatgcacatacatcaat 19286444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 396
Target Start/End: Complemental strand, 19786650 - 19786529
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||  |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19786650 agaacgctcaagaagtcccctcatgcattaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19786552  T
Q  375 ggcttacagaagg-tctgggttc 396  Q
     |||||||| ||| |||||||||    
T  19786551 agcttacagtaggttctgggttc 19786529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 459
Target Start/End: Complemental strand, 34640724 - 34640575
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgctt-----------aggg 409  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||| |||||| || | ||||||           | ||    
T  34640724 aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacgg 34640625  T
Q  410 ttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||    
T  34640624 ttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 459
Target Start/End: Complemental strand, 34647398 - 34647249
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgctt-----------aggg 409  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||| |||||| || | ||||||           | ||    
T  34647398 aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacgg 34647299  T
Q  410 ttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||    
T  34647298 ttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 417
Target Start/End: Complemental strand, 19472082 - 19471914
Alignment:
Q  248 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgctt 346  Q
    ||||||||||||| |||||||||||| | ||||||||| | | |||||| ||||||||||| ||||||||||||| ||||||| ||| |   ||||||||    
T  19472082 ggttatacaagttgaaggaaacatttcaaaatgctcaaaaggatcccctagtgcacgaagc-aaaattcaaaaagtggctgac-aagaccttcttcgctt 19471985  T
Q  347 aagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttg 417  Q
    ||||||  | | | || ||||||||||||||| |||||| ||  |||||| ||||||| | || |||||||    
T  19471984 aagcgatggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggctcgcttg 19471914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 459
Target Start/End: Complemental strand, 24513465 - 24513370
Alignment:
Q  364 cttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    ||||||||||||||| |||||| || ||||||| ||||||| | |||||||||||||||||||||   ||||| |||| | ||||||||| |||||    
T  24513465 cttaagcgaccggctcacagaaagtttgggttccgctcgctaacggttcgcttgagcgaacttctggaagaatgaaaatgatttttcgcttacagg 24513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19472330 - 19472289
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19472330 atgcaactgactccacttgtgtatatctacatacaactcaac 19472289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5290147 - 5290109
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5290147 atgcaactgactccacttgtgtatatctacatacaactc 5290109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10582845 - 10582807
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10582845 atgcaactgactccacttgtgtatatctacatacaactc 10582807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14616278 - 14616240
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14616278 atgcaactgactccacttgtgtatatctacatacaactc 14616240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14724535 - 14724573
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14724535 atgcaactgactccacttgtgtatatctacatacaactc 14724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17414167 - 17414205
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17414167 atgcaactgactccacttgtgtatatctacatacaactc 17414205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19451456 - 19451494
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19451456 atgcaactgactccacttgtgtatatctacatacaactc 19451494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4476536 - 4476577
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  4476536 atgcaactgactccacttgtgtatatctgcatacaactcaac 4476577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9100009 - 9099968
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  9100009 atgcaactgactccactagtgtatatctacatacaactcaac 9099968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14995956 - 14995915
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  14995956 atgcaactgactccgcttgtgtatatctacatacaactcaac 14995915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15457634 - 15457675
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  15457634 atgcgactgactccacttgtgtatatctacatacaactcaac 15457675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15464229 - 15464270
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  15464229 atgcgactgactccacttgtgtatatctacatacaactcaac 15464270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19467994 - 19468031
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19467994 atgcaactgactccacttgtgtatatctacatacaact 19468031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 20008622 - 20008529
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||||| ||||  |||| ||||||||||| || | |||||| ||||||||||| |||||||| |||||||||||| | ||||||| || |||||    
T  20008622 aggctgtctaacactcagttcgcttaagcaacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgct 20008529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20008885 - 20008844
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20008885 atgcaactgactccacttgtgtatatctgcatacaactcaac 20008844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21365473 - 21365432
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  21365473 atgcaactgactccacttgtgtatatctgcatacaactcaac 21365432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23969455 - 23969414
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  23969455 atgcaactgactccacttgtgtatatctgcatacaactcaac 23969414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24720770 - 24720807
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24720770 atgcaactgactccacttgtgtatatctacatacaact 24720807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25396175 - 25396216
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  25396175 atgcaactgactccacttgtgtatatatacatacaactcaac 25396216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29096982 - 29097023
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  29096982 atgcaactgactccactagtgtatatctacatacaactcaac 29097023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31251540 - 31251581
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  31251540 atgcaactaactccacttgtgtatatctacatacaactcaac 31251581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 459
Target Start/End: Complemental strand, 25470448 - 25470290
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgctt------ 405  Q
    |||| ||| ||||||||||||| ||||||||||||||||||   |||||| |||||||||||  ||||||| ||| |||||| || | ||||||          
T  25470448 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctagttcgcttaagcgaccaacttacagtaggttctgggctcagttcgcttacgggt 25470349  T
Q  406 -----agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
         | |||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  25470348 cgctcacggttcgcttgagcgaattttggacagaatcaaaatggtttttcgctcacagg 25470290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4476616 - 4476655
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactca 40  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  4476616 atgcaactaactccacttgtgtatatctacatacaactca 4476655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 457
Target Start/End: Complemental strand, 21365200 - 21365067
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttaggg-----------ttcgcttgagcgaa 423  Q
    |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| ||           ||||||||||||||    
T  21365200 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 21365101  T
Q  424 cttctaacagaatcaaaacggtttttcgctcaca 457  Q
    |||   |||||||||||| |||||||||||||||    
T  21365100 ctttggacagaatcaaaatggtttttcgctcaca 21365067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 457
Target Start/End: Complemental strand, 23969182 - 23969049
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttaggg-----------ttcgcttgagcgaa 423  Q
    |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| ||           ||||||||||||||    
T  23969182 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 23969083  T
Q  424 cttctaacagaatcaaaacggtttttcgctcaca 457  Q
    |||   |||||||||||| |||||||||||||||    
T  23969082 ctttggacagaatcaaaatggtttttcgctcaca 23969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2708540 - 2708614
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  2708540 atgcaactaactccacttgtgtatatctacatacaactagacaatgcatatatgtacatatgacttacaactccg 2708614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19819069 - 19819143
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  19819069 atgcaactaactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 19819143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24513834 - 24513796
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  24513834 atgcaaccgactccacttgtgtatatctacatacaactc 24513796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 221848 - 221881
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  221848 gactccacttgtgtatatctacatacaactcaac 221881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8768181 - 8768141
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  8768181 atgcaactgac-ccacttgtgtatatctacatacaactcaac 8768141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12941968 - 12942012
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  12941968 atgcaactgac-ccacctgtgtatatctacatacaactcaactaca 12942012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23233414 - 23233377
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  23233414 atgcaacttactccacttgtgtatatctacatacaact 23233377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 25347265 - 25347298
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  25347265 gactccacttgtgtatatctacatacaactcaac 25347298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 9185916 - 9185880
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9185916 actccacttgtgtatatcaacatacaactcaactaca 9185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 18137658 - 18137694
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18137658 actccacttgtgtatatcaacatacaactcaactaca 18137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 19439883 - 19439923
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactacacatatat 53  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  19439883 ccacttgtgtatatctacatacaactcaaccatacatatat 19439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 21469902 - 21469934
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  21469902 actccacttgtgtatatctacatacaactcaac 21469934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 21476403 - 21476435
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  21476403 actccacttgtgtatatctacatacaactcaac 21476435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 29416465 - 29416409
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||| | |||||||||    
T  29416465 gactccacttgtgtatatatacatacaactcaacaatgcatatatatgatatgactt 29416409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 18788539 - 18788570
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  18788539 ccacttgtgtatatctacatacaactcaacta 18788570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 18799519 - 18799550
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  18799519 ccacttgtgtatatctacatacaactcaacta 18799550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Complemental strand, 19786506 - 19786455
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  19786506 ggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19786455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 21566184 - 21566153
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  21566184 ccacttgtgtatatctacatacaactcaacta 21566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 5290080 - 5290046
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||| ||||||||||    
T  5290080 tgactccacttgtgtatatctacacacaactcaac 5290046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19588589 - 19588551
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  19588589 atgcaactaactccactggtgtatatctacatacaactc 19588551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 23105373 - 23105431
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||| ||||||||||||||||||| ||| |  ||||||| | |||||||||||    
T  23105373 gactccacttatgtatatctacatacaactgaacaatgcatatatataatatgacttac 23105431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23234933 - 23234896
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  23234933 atgcaactgactc-acttgtgtatatctacatacaactc 23234896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 14133040 - 14133011
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  14133040 gactccacttgtgtatatctacatacaact 14133011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 18786245 - 18786274
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  18786245 gactccacttgtgtatatctacatacaact 18786274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 457
Target Start/End: Original strand, 19877874 - 19877923
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcaca 457  Q
    |||||||||||||||||||   ||||||| |||| |||||||||||||||    
T  19877874 ggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 19877923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 22798517 - 22798488
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  22798517 gactccacttgtgtatatctacatacaact 22798488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 25749893 - 25749926
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  25749893 gactcaacttgtgtatatctacatacaactcaac 25749926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 2288218 - 2288182
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  2288218 gactcaacttgtgtatatcaacatacaactcaactac 2288182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 9186841 - 9186903
Alignment:
Q  290 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgac 353  Q
    |||||| ||||||||||||||  ||||||||| |||||||||||| ||| |||||||||||||||    
T  9186841 tcccctagtgcacgaagcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgac 9186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 16829622 - 16829658
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  16829622 gactcaacttgtgtatatcaacatacaactcaactac 16829658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 17027186 - 17027158
Alignment:
Q  10 actccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||||||||||||||||    
T  17027186 actccacttgtgtatatctacatacaact 17027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19726775 - 19726810
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  19726775 atgcaactgac-ccacttgtgtatatctacatacaac 19726810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 25772793 - 25772825
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||| |||||||||||||||||||||||    
T  25772793 actccacttatgtatatctacatacaactcaac 25772825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 3e-86; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 13 - 415
Target Start/End: Complemental strand, 41456144 - 41455741
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactaca-catatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||||||||   ||||| |||||||||||||||||||||| || | | |||||| |||||||| |||||||| ||||    
T  41456144 ccacctgtgtatatctacatacaactcaactaatgcatatgtttcatatgacttactactccgtaact-caaacaattcagaacattcacaattatttat 41456046  T
Q  112 aattatgcacatacatcaatttcattcaataaattatatattcacttgat-ttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatca 210  Q
    |||||||| | ||||||||||||||||||||  || ||||||||||| || ||| |||||||| ||||| || ||| ||||||| ||| |||||||||      
T  41456045 aattatgcgcttacatcaatttcattcaatag-ttgtatattcacttaatcttcctactcaattatctccaacatttactaacaccaatcaattcgattg 41455947  T
Q  211 ccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaa 310  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||   |  ||  |||| ||||| ||||||||||| ||||| ||||||     
T  41455946 ccagcttgttctagtaggattctgatacctatactaggattatacaagttaaagaggaagttaaagaacgctcaggaagtcccctcatgcactaagcaac 41455847  T
Q  311 aattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgcttaggg 409  Q
    | |||| ||| ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||| ||||||||| | ||||||| ||    
T  41455846 agttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgg 41455747  T
Q  410 ttcgct 415  Q
     |||||    
T  41455746 gtcgct 41455741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 417
Target Start/End: Original strand, 18914177 - 18914590
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactccgaaaattctaacaatccagaacataca 100  Q
    ||||||||||| |||||||||||||||||||||||||| ||| | |||||| ||||||||||||||| |||||| || ||| ||||||||||||||||||    
T  18914177 atgcaactgac-ccacttgtgtatatctacatacaacttaacaatacatatgtttcatatgacttacaactccgcaa-ttccaacaatccagaacataca 18914274  T
Q  101 caattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaacc 200  Q
    ||||||||||||||||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  18914275 caattaattataattatgctcatacatcaatttcattcaacataatatatattcacttgatttcatactcaatcatctccaaaattcactaacatcaact 18914374  T
Q  201 aattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtg 299  Q
    ||||| ||||  ||  |||| |||||||||| || |   |||| || |||||||||||||  | |||| ||| |   |||||||| | | ||||||  ||    
T  18914375 aattccatcaatagagtgttttagtaggattatg-tgtatatataaaggttatacaagttggaagaaatattattatatgctcaaaaggatcccctaatg 18914473  T
Q  300 cacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctg 398  Q
    ||||| |||||||||| ||||| |||||||||||| ||| ||||||||||||||  |   |||| ||||||||||||||||| |||  ||  |||||| |    
T  18914474 cacgaggcaaaaattc-aaaagtggctgactaagg-tcatcttcgcttaagcgatggcaggttcgcttaagcgaccggcttatagagagttggggttccg 18914571  T
Q  399 ctcgcttagggttcgcttg 417  Q
    |||||| | ||||||||||    
T  18914572 ctcgctaaaggttcgcttg 18914590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 453
Target Start/End: Complemental strand, 55499798 - 55499658
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    ||||||||| |||||||||||    ||||||||||||||||   |||||| |||||||||||||||||||| | |||| ||||||||||||||| |||||    
T  55499798 ttcaaaaagtggctgactaagatcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtaagtctaggttctgctcgcttacggttc 55499699  T
Q  413 gcttgagcgaacttctaacagaatcaaaacggtttttcgct 453  Q
    | |||||||||||  |  ||||||||||  |||||||||||    
T  55499698 gtttgagcgaactcttggcagaatcaaattggtttttcgct 55499658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 16802139 - 16802029
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    ||||||||| |||| |||||||   ||||||||||| |||| | ||| || |||||||||||||||||||| | |||||||||||||||||||| |||||    
T  16802139 ttcaaaaagtggctaactaaggtcaacttcgcttaaacgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttc 16802040  T
Q  413 gcttgagcgaa 423  Q
    |||||||||||    
T  16802039 gcttgagcgaa 16802029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 222 - 404
Target Start/End: Complemental strand, 13324562 - 13324381
Alignment:
Q  222 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 320  Q
    |||||||||| || ||||||||||||||||||| ||| | || ||||||| || |||||||||| | | ||||||  |||||||||||||| |||| |||    
T  13324562 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13324465  T
Q  321 gaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgct 404  Q
    | ||||||||||||||||  ||||||||||||  | | | || |||||||||| ||||| ||||| || |||||| ||||||||    
T  13324464 gtggctgactaaggctcagctcgcttaagcgaaggctggctcgcttaagcgactggcttgcagaaagtttgggttttgctcgct 13324381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 456
Target Start/End: Original strand, 24192274 - 24192418
Alignment:
Q  323 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggtt-----------ctgctcgcttagggtt 411  Q
    ||||||||||||  ||||||||||||||||| | |||||| |||||||||||||||||||| | |||||||||           | | ||||| | ||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcaactcacttacggttcgctcacggtt 24192373  T
Q  412 cgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  24192374 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 24192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 18136174 - 18136117
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 140  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18136174 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 18136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 13302974 - 13302844
Alignment:
Q  222 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 320  Q
    |||||||||| || ||||||||||||||||||| ||| | || ||||||| || |||||||||| | | ||||||  |||||||||||||| |||| |||    
T  13302974 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13302877  T
Q  321 gaggctgactaaggctcacttcgcttaagcgac 353  Q
    | ||||||||||||||||  |||||||||||||    
T  13302876 gtggctgactaaggctcagctcgcttaagcgac 13302844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 13313650 - 13313520
Alignment:
Q  222 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 320  Q
    |||||||||| || ||||||||||||||||||| ||| | || ||||||| ||  ||||||||| | | ||||||  |||||||||||||| |||| |||    
T  13313650 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttaaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13313553  T
Q  321 gaggctgactaaggctcacttcgcttaagcgac 353  Q
    | ||||||||||||||||  |||||||||||||    
T  13313552 gtggctgactaaggctcagctcgcttaagcgac 13313520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18136323 - 18136249
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatat-atttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||||||| ||| |  |||||  ||||||||||||||| ||||||    
T  18136323 atgcaactgactccacttgtgtatatctacatacaacttaaccatgcatatgttttcatatgacttacaactccg 18136249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13692094 - 13692135
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13692094 atgcaactgactccacttgtgtatatctacatacaactcaac 13692135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14764055 - 14764014
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14764055 atgcaactgactccacttgtgtatatctacatacaactcaac 14764014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23371801 - 23371760
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23371801 atgcaactgactccacttgtgtatatctacatacaactcaac 23371760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23371882 - 23371841
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23371882 atgcaactgactccacttgtgtatatctacatacaactcaac 23371841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51300353 - 51300394
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51300353 atgcaactgactccacttgtgtatatctacatacaactcaac 51300394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18900176 - 18900219
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  18900176 atgcaaccgactccacttgtgtatatctacatacaactcaacta 18900219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11850668 - 11850630
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11850668 atgcaactgactccacttgtgtatatctacatacaactc 11850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 13036982 - 13036924
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  13036982 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 13036924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15518666 - 15518740
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    ||||||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  15518666 atgcaactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 15518740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17496292 - 17496330
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17496292 atgcaactgactccacttgtgtatatctacatacaactc 17496330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11644823 - 11644786
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11644823 atgcaactgactccacttgtgtatatctacatacaact 11644786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12034353 - 12034312
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  12034353 atgcaactgactccacttgtgtatatctgcatacaactcaac 12034312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12202453 - 12202490
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12202453 atgcaactgactccacttgtgtatatctacatacaact 12202490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12479712 - 12479675
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12479712 atgcaactgactccacttgtgtatatctacatacaact 12479675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14764136 - 14764095
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14764136 atgcaactgactccacttgtgtatatctgcatacaactcaac 14764095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14864959 - 14865000
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14864959 atgcaactgactccacttgtgtatatctgcatacaactcaac 14865000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 18129660 - 18129607
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcat 136  Q
    |||||| |||||||| ||||||||||||||||||||| | ||||||||||||||    
T  18129660 aacaattcagaacattcacaattaattataattatgctcgtacatcaatttcat 18129607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18129809 - 18129736
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacata-tatttcatatgacttactactcc 73  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |  |||| | ||||||||||||||| |||||    
T  18129809 atgcaactaactccacttgtgtatatctacatacaacttaaccatgcatattttttcatatgacttacaactcc 18129736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19236006 - 19235965
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19236006 atgcaactgactccactagtgtatatctacatacaactcaac 19235965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20249142 - 20249101
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  20249142 atgcaattgactccacttgtgtatatctacatacaactcaac 20249101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51300273 - 51300314
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  51300273 atgcaactgactccacttgtgtatatctgcatacaactcaac 51300314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31690602 - 31690551
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat 53  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  31690602 atgcaactgac-ccacttgtgtatatctacatacaactcaaccatacatatat 31690551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31943613 - 31943664
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat 53  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  31943613 atgcaactgac-ccacttgtgtatatctacatacaactcaaccatacatatat 31943664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 14865216 - 14865319
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcga-cagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggtt 411  Q
    |||| ||| |||||||||||  |||| ||||||||||||| | | |||||| ||||||||||| ||||| || |||||||||||| | ||||||| || |    
T  14865216 ttcagaaaaaggctgactaacactcagttcgcttaagcgaacggctagttcgcttaagcgaccagcttagagtaggtctgggttcagttcgcttacgggt 14865315  T
Q  412 cgct 415  Q
    ||||    
T  14865316 cgct 14865319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 2270261 - 2270227
Alignment:
Q  5 aactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||    
T  2270261 aactgactccacttgtgtatatctacatacaactc 2270227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10390403 - 10390365
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  10390403 atgcaactgactccacttgtgtatatctgcatacaactc 10390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10415512 - 10415474
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  10415512 atgcaactgactccacttgtgtatatctgcatacaactc 10415474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10422182 - 10422144
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  10422182 atgcaactgactccacttgtgtatatctgcatacaactc 10422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 11850601 - 11850567
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  11850601 tgactccacttgtgtatatctacatacaactcaac 11850567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19443641 - 19443679
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  19443641 atgcaactgactccgcttgtgtatatctacatacaactc 19443679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 20249071 - 20249037
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  20249071 tgactccacttgtgtatatctacatacaactcaac 20249037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12153025 - 12153066
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  12153025 atgcaactgacttcactagtgtatatctacatacaactcaac 12153066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12255294 - 12255334
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  12255294 atgcaactgac-ccacttgtgtatatctacatacaactcaac 12255334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12304917 - 12304961
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  12304917 atgcaactgactc-acctgtgtatatctacatacaactcaactaca 12304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12355977 - 12355944
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatac 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12355977 atgcaactgactccacttgtgtatatctacatac 12355944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12362526 - 12362493
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatac 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12362526 atgcaactgactccacttgtgtatatctacatac 12362493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17130867 - 17130908
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  17130867 atgcatctgactccacttgtgtatatctgcatacaactcaac 17130908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 17512722 - 17512755
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  17512722 gactccacttgtgtatatctacatacaactcaac 17512755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18719141 - 18719101
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  18719141 atgcaactgac-ccacttgtgtatatctacatacaactcaac 18719101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 38312088 - 38312055
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaa 41  Q
    ||||||||||||||||||||||||||||||||||    
T  38312088 tgactccacttgtgtatatctacatacaactcaa 38312055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 1989258 - 1989226
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  1989258 actccacttgtgtatatctacatacaactcaac 1989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 12855928 - 12855892
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  12855928 actccacttgtgtatatcgacatacaactcaactaca 12855892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 15011999 - 15011967
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  15011999 actccacttgtgtatatctacatacaactcaac 15011967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 34852208 - 34852152
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||| | |||||||||    
T  34852208 gactccacttgtgtatatatacatacaactcaacaatgcatatatatgatatgactt 34852152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 16802446 - 16802415
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  16802446 ccacttgtgtatatctacatacaactcaacta 16802415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 18889138 - 18889177
Alignment:
Q  2 tgcaactgactccacttgtgtatatctacatacaactcaa 41  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  18889138 tgcaaccgactgcacttgtgtatatctacatacaactcaa 18889177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23173931 - 23173973
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  23173931 atgcaactgac-ccacttgtgtatatctacatacaacttaacta 23173973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11964909 - 11964871
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  11964909 atgcaactaactccacttgtgtatatctacttacaactc 11964871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13313943 - 13313906
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13313943 atgcaactgac-ccacttgtgtatatctacatacaactc 13313906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13324855 - 13324818
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13324855 atgcaactgac-ccacttgtgtatatctacatacaactc 13324818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 23174392 - 23174426
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||| |||||||||||||||||||||||||    
T  23174392 tgactccacctgtgtatatctacatacaactcaac 23174426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 10390083 - 10390034
Alignment:
Q  409 gttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacag 458  Q
    ||||||||||||||| ||   |||||||||||| ||||||||||||||||    
T  10390083 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10390034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 10415172 - 10415123
Alignment:
Q  409 gttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacag 458  Q
    ||||||||||||||| ||   |||||||||||| ||||||||||||||||    
T  10415172 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10415123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 10421842 - 10421793
Alignment:
Q  409 gttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacag 458  Q
    ||||||||||||||| ||   |||||||||||| ||||||||||||||||    
T  10421842 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 12034072 - 12034007
Alignment:
Q  358 agttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaa 423  Q
    ||||| ||||||||||| |||||||| |||||||||||  | ||||||| || |||||| ||||||    
T  12034072 agttcgcttaagcgaccagcttacagtaggtctgggtttagttcgcttacgggtcgcttaagcgaa 12034007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 12255750 - 12255779
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  12255750 ccacttgtgtatatctacatacaactcaac 12255779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 12274406 - 12274435
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  12274406 gactccacttgtgtatatctacatacaact 12274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12961409 - 12961369
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  12961409 atgcaactgac-ccacttgtgtatatctacataaaactcaac 12961369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14289015 - 14288974
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| ||| || ||||||||||||||||||||||||||||    
T  14289015 atgcaaatgattcaacttgtgtatatctacatacaactcaac 14288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 14569979 - 14570008
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  14569979 gactccacttgtgtatatctacatacaact 14570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14652723 - 14652683
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  14652723 atgcaactgac-ccacttgtgtatatctacatacaacccaac 14652683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 15934989 - 15934960
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  15934989 gactccacttgtgtatatctacatacaact 15934960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 17199036 - 17199007
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  17199036 ccacttgtgtatatctacatacaactcaac 17199007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 23174327 - 23174363
Alignment:
Q  2 tgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23174327 tgcaactgac-ccacttgtgtatatctacatacaactc 23174363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 9533232 - 9533335
Alignment:
Q  88 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 187  Q
    ||||||| ||||||||||||| ||||| |  |  || ||| || ||||||||| | | ||||| |||||||  |||||||||||||||||||  ||||||    
T  9533232 tccagaaaatacacaattaatcataatcaaactaatgcataaagttcattcaacatagtatatgttcacttagtttcatactcaatcatctc-caaattc 9533330  T
Q  188 actaa 192  Q
    |||||    
T  9533331 actaa 9533335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 10554246 - 10554282
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  10554246 gactccacttgtgtatatcagcatacaactcaactac 10554282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 16799624 - 16799660
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  16799624 gactcaacttgtgtatatcaacatacaactcaactac 16799660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 17157244 - 17157272
Alignment:
Q  16 cttgtgtatatctacatacaactcaacta 44  Q
    |||||||||||||||||||||||||||||    
T  17157244 cttgtgtatatctacatacaactcaacta 17157272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17243687 - 17243651
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||  ||||||||||||||||||    
T  17243687 atgcaactgactccactgatgtatatctacatacaac 17243651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 24191945 - 24191973
Alignment:
Q  16 cttgtgtatatctacatacaactcaacta 44  Q
    |||||||||||||||||||||||||||||    
T  24191945 cttgtgtatatctacatacaactcaacta 24191973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 54973214 - 54973250
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  54973214 gactcgacttgtgtatatcaacatacaactcaactac 54973250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 54975824 - 54975860
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  54975824 gactcgacttgtgtatatcaacatacaactcaactac 54975860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 54978434 - 54978470
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  54978434 gactcgacttgtgtatatcaacatacaactcaactac 54978470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 55292723 - 55292687
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  55292723 gactcgacttgtgtatatcaacatacaactcaactac 55292687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 128; Significance: 6e-66; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 18 - 353
Target Start/End: Original strand, 110943 - 111284
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | || || | ||||||||||| |||||||||| |||||||||    
T  110943 tgtgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acaactcga-caatccagaacctacacaattatttataatta 111040  T
Q  117 tgcacatacatcaatttcattcaataaattatatat--------tcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgat 208  Q
     ||||||||||||||  ||||| | |  ||||||||        ||||||| |||||||| |||||||||| || ||| ||||||| ||| |||| | ||    
T  111041 cgcacatacatcaatcacattccacatgttatatatatacatattcacttgttttcatacacaatcatctccaacatttactaacaccaatcaatccaat 111140  T
Q  209 caccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagca 308  Q
    |||| |||||||||| |||||||| | |||||| || |||||||||| |||||||||| | ||| ||||||||||||||||||||||| ||||| ||| |    
T  111141 caccggcttgttctaataggattcagttacctacaccagggttatactagttaaaggagaaattatagaatgctcaagaagtcccctcatgcactaagta 111240  T
Q  309 aaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 353  Q
    | | |||| ||| |||||||||||| |||||||||||||||||||    
T  111241 atagttcagaaa-aggctgactaagactcacttcgcttaagcgac 111284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 92140 - 92099
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  92140 atgcaactgactccacttgtgtatatctgcatacaactcaac 92099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 97866 - 97825
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  97866 atgcaactgactccacttgtgtatatctgcatacaactcaac 97825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 91881 - 91783
Alignment:
Q  317 aaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| ||||| |||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  91881 aaaaaaggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 91783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 97607 - 97509
Alignment:
Q  317 aaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| ||||| |||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  97607 aaaaaaggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 97509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 111330 - 111378
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    |||||||||||||||||||   |||||||||||| ||||||||||||||    
T  111330 ggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 120; Significance: 3e-61; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 353
Target Start/End: Original strand, 241 - 407
Alignment:
Q  186 tcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaa 285  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||    
T  241 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 340  T
Q  286 gaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 353  Q
    || ||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  341 gatgtccccttgtgcacgaagc-aaaattcagaaagaggctgactaaggttcacttcgcttaagcgac 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 353
Target Start/End: Original strand, 7386 - 7552
Alignment:
Q  186 tcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaa 285  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||    
T  7386 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 7485  T
Q  286 gaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 353  Q
    || ||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  7486 gatgtccccttgtgcacgaagc-aaaattcagaaagaggctgactaaggttcacttcgcttaagcgac 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 409 - 504
Alignment:
Q  375 ggcttacagaaggtctgggttctgctcgcttagggttcgcttg-----------agcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    ||||||||||| ||||||||||||||||||||||||||| |||           ||||||||||| |||||||||||| |||||||||||||||||    
T  409 ggcttacagaaagtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 7554 - 7649
Alignment:
Q  375 ggcttacagaaggtctgggttctgctcgcttagggttcgcttg-----------agcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    ||||||||||| ||||||||||||||||||||||||||| |||           ||||||||||| |||||||||||| |||||||||||||||||    
T  7554 ggcttacagaaagtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 7649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 102)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 456
Target Start/End: Complemental strand, 13123963 - 13123506
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || || | |||| ||||||||||||||||| |||||||||    
T  13123963 tgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caattcagaacatacacaattatttataatta 13123866  T
Q  117 tgcacatacatcaatttcattca-------ataaat-tata--tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcg 206  Q
    |||||||||||||||  |||||        ||| || ||||  |||||||||  || ||||| |||||| | | || ||| ||||| | ||| |||| |     
T  13123865 tgcacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaatcca 13123766  T
Q  207 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 306  Q
    |||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| |||    
T  13123765 atcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaag 13123666  T
Q  307 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctt- 405  Q
     || | |||| ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||     
T  13123665 taatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgctta 13123567  T
Q  406 ----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
              | |||||||||||||||||||   |||||||||||| ||||||||||||||    
T  13123566 cgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 13123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 150 - 415
Target Start/End: Original strand, 13742860 - 13743121
Alignment:
Q  150 tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaaggg 249  Q
    |||||||||| |||||||| |||||| ||| || ||| ||||||| |||  ||| | |||  | ||| |||||| |||||||| | |||||| || ||||    
T  13742860 tattcacttgttttcatacacaatcacctccaacatt-actaacaccaattaatccaatcctcggctcgttctaataggattcggttacctacaccaggg 13742958  T
Q  250 ttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaag 349  Q
    |||||| ||||||| |||| ||| ||||||||||||||||||||||| |||||||| ||||| |||| ||   |||||||||||||||||||||||||||    
T  13742959 ttatactagttaaaagaaatattatagaatgctcaagaagtcccctcatgcacgaaacaaaagttcagaa---ggctgactaaggctcacttcgcttaag 13743055  T
Q  350 cgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| | |||||| ||||||||||||||||| || |||||||||||| ||||||||| || |||||    
T  13743056 cgacggctagttcgcttaagcgaccggcttatagtaggtctgggttcagctcgcttacgggtcgct 13743121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 406
Target Start/End: Complemental strand, 12710892 - 12710496
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || || | |||| ||||||||||||||||| |||||||||    
T  12710892 tgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-ataactcga-caattcagaacatacacaattatttataatta 12710795  T
Q  117 tgcacatacatcaatttcattca-------ataaat-tata--tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcg 206  Q
    |||||||||||||||  |||||        ||| || ||||  |||||||||  || ||||| |||||| | | || ||| ||||| | ||| |||| |     
T  12710794 tgcacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaatcca 12710695  T
Q  207 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 306  Q
    |||||| ||||||| || |||| ||||  |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| |||    
T  12710694 atcaccggcttgttataataggcttcttctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaag 12710595  T
Q  307 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctta 406  Q
     || | |||| ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | |||||||    
T  12710594 taatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgctta 12710496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 16676623 - 16676845
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| | | ||||||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  16676623 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 16676721  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    |||||||||||||||   |||||| |||||||||||||||||||| | |||||||||| ||||||||| |||||||||||||||| |  | |||||||||    
T  16676722 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgcttatggttcgcttgagcgaattcttgacagaatca 16676821  T
Q  439 aaacggtttttcgctcacaggttc 462  Q
    ||| ||||||||||| ||||||||    
T  16676822 aaatggtttttcgcttacaggttc 16676845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 240 - 462
Target Start/End: Original strand, 17650859 - 17651081
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| | | ||||||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  17650859 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 17650957  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    |||||||||||||||   |||||| |||||||||||||||||||| | |||||||||| ||||||||| |||||||||||||||| |  | |||||||||    
T  17650958 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgcttatggttcgcttgagcgaattcttgacagaatca 17651057  T
Q  439 aaacggtttttcgctcacaggttc 462  Q
    ||| ||||||||||| ||||||||    
T  17651058 aaatggtttttcgcttacaggttc 17651081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 13742690 - 13742803
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||| ||||||||||| ||||  |||||| ||||||||||||||||||||| | || || |||||||||||||||||||||||| |||||||||    
T  13742690 tgtgtatatcaacatacaactcgactattacatatgtttcatatgacttactactcc-acaactcaaacaatccagaacatacacaattatttataatta 13742788  T
Q  117 tgcacatacatcaat 131  Q
    ||| |||||||||||    
T  13742789 tgctcatacatcaat 13742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 275 - 459
Target Start/End: Original strand, 13006706 - 13006901
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  13006706 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 13006804  T
Q  375 ggcttacagaagg-tctgggttctgctcgctt-----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
     |||||||| ||| ||||||||| | ||||||           | |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  13006805 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 13006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 146 - 384
Target Start/End: Original strand, 46625166 - 46625403
Alignment:
Q  146 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctataca 245  Q
    |||||||||| ||| |||||||||||||||| |  |||||||||||   ||||||||||| || ||||   ||||  |||||||||  | | | |||||     
T  46625166 tatatattcatttggtttcatactcaatcatattcaaaattcactatattcaaccaattcaattaccaatgtgtttcagtaggatttag-tgcatatacc 46625264  T
Q  246 agggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgc 344  Q
    ||||| ||||||||| || ||||||||||| ||||||||| | | | |||| ||||||||| ||||| |||||| || ||||||||||| |  |||||||    
T  46625265 agggtcatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaaacaaaa-ttcaaagagtggctgactaagacctacttcgc 46625363  T
Q  345 ttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    ||||||||| | | | || ||||||||||| |||||||||    
T  46625364 ttaagcgacggctggctcgcttaagcgacctgcttacaga 46625403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 125 - 384
Target Start/End: Original strand, 13678649 - 13678906
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||| | | ||||||||||||||  ||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  13678649 catcaagttcattcaacatagtatatgttcacttggtatgatactcaatcatcttcaaa-ttcactaaactcaactaattcgattaccaaagtgtttcag 13678747  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    |||||||| | | | |||| || |||||||||| || || ||||||||||  ||||||||| | | ||||||  ||||||| |||||  ||||||||| |    
T  13678748 taggattcag-tgcatatataaaggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaag-ttcaaaaagtg 13678845  T
Q  324 gctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    ||||||||||| ||| ||||||||||||||| | | |||| |||||||||||||||||||||    
T  13678846 gctgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacaga 13678906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 11390020 - 11389910
Alignment:
Q  313 ttcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggtt 411  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| | ||| || |||||||||||| || |||| | |||||||||| ||||||||| ||||    
T  11390020 ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccgactcacagtaagtctgggttccgctcgcttacggtt 11389922  T
Q  412 cgcttgagcgaa 423  Q
    ||||||||||||    
T  11389921 cgcttgagcgaa 11389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 13006487 - 13006604
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | | ||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  13006487 ccacctgtgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttat 13006584  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  13006585 aattatgcacatacatcaat 13006604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 417
Target Start/End: Complemental strand, 20311709 - 20311631
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttg 417  Q
    ||||||||||||||| | ||| || |||||||||||||||| ||| | |||||||||||||||||||| ||||||||||    
T  20311709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttgcagtaagtctgggttctgctcgcttacggttcgcttg 20311631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 147239 - 147280
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  147239 atgcaactgactccacttgtgtatatctacatacaactcaac 147280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 832988 - 832947
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  832988 atgcaactgactccacttgtgtatatctacatacaactcaac 832947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 837031 - 836990
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  837031 atgcaactgactccacttgtgtatatctacatacaactcaac 836990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1198168 - 1198127
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1198168 atgcaactgactccacttgtgtatatctacatacaactcaac 1198127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1202211 - 1202170
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1202211 atgcaactgactccacttgtgtatatctacatacaactcaac 1202170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3289787 - 3289746
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3289787 atgcaactgactccacttgtgtatatctacatacaactcaac 3289746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10897109 - 10897068
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10897109 atgcaactgactccacttgtgtatatctacatacaactcaac 10897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 459
Target Start/End: Complemental strand, 12591377 - 12591230
Alignment:
Q  324 gctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgctt-----------agggtt 411  Q
    ||||||||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||| |||||| || | ||||||           | ||||    
T  12591377 gctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggatctgggatcagttcgcttacgggtcgctcacggtt 12591278  T
Q  412 cgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||| ||   |||||||||||| |||||||||||||||||    
T  12591277 cgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 12591230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14320571 - 14320530
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14320571 atgcaactgactccacttgtgtatatctacatacaactcaac 14320530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15166946 - 15166987
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15166946 atgcaactgactccacttgtgtatatctacatacaactcaac 15166987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16008336 - 16008377
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16008336 atgcaactgactccacttgtgtatatctacatacaactcaac 16008377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18872037 - 18872078
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18872037 atgcaactgactccacttgtgtatatctacatacaactcaac 18872078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18872118 - 18872159
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18872118 atgcaactgactccacttgtgtatatctacatacaactcaac 18872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46625021 - 46625062
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46625021 atgcaactgactccacttgtgtatatctacatacaactcaac 46625062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 1612795 - 1612843
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaactcaactacacatata 52  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  1612795 caactgactccacttgtgtatatctacatacaactcaaccatacatata 1612843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 405
Target Start/End: Complemental strand, 11383554 - 11383440
Alignment:
Q  290 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||| | ||| || |||||||||| |||| |||| | ||    
T  11383554 tcccctagtgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgacaggctcacagtaagt 11383457  T
Q  389 ctgggttctgctcgctt 405  Q
    |||||||| ||||||||    
T  11383456 ctgggttccgctcgctt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20907366 - 20907326
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20907366 atgcaactgactccacttgtgtatatctacatacaactcaa 20907326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 12694768 - 12694826
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  12694768 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 12694826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14179011 - 14178973
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14179011 atgcaactgactccacttgtgtatatctacatacaactc 14178973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 16090457 - 16090559
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || ||    
T  16090457 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttcagttcgcttacgggtc 16090556  T
Q  413 gct 415  Q
    |||    
T  16090557 gct 16090559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2464483 - 2464524
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  2464483 atgcaactgactccacttgtgtatatctgcatacaactcaac 2464524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2966102 - 2966143
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  2966102 atgcaactgactccacttgtgtatatctgcatacaactcaac 2966143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3327973 - 3328014
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  3327973 atgcaactgactctacttgtgtatatctacatacaactcaac 3328014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3858362 - 3858321
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  3858362 atgcaactgactccacttgtgtatatctgcatacaactcaac 3858321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10897190 - 10897149
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  10897190 atgcaactgactccacttgtgtatatctgcatacaactcaac 10897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11857706 - 11857669
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11857706 atgcaactgactccacttgtgtatatctacatacaact 11857669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 12547350 - 12547387
Alignment:
Q  5 aactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12547350 aactgactccacttgtgtatatctacatacaactcaac 12547387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14565960 - 14566001
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  14565960 atgcaactgactccacctgtgtatatctacatacaactcaac 14566001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15104344 - 15104307
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15104344 atgcaactgactccacttgtgtatatctacatacaact 15104307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16008255 - 16008296
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  16008255 atgcaactgactccacttgtatatatctacatacaactcaac 16008296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16090200 - 16090241
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  16090200 atgcaactgactccacttgtgtatatctgcatacaactcaac 16090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29182049 - 29182008
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  29182049 atgcaactgactccacttgtgtatatctgcatacaactcaac 29182008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46682194 - 46682157
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46682194 atgcaactgactccacttgtgtatatctacatacaact 46682157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 14320315 - 14320243
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 385  Q
    |||| ||| ||||||||||||||||| |||||||||||||  | ||| || ||||||||||||||| ||||||    
T  14320315 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccggctcacagaa 14320243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11383846 - 11383804
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  11383846 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 11383804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11390334 - 11390292
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  11390334 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 11390292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 18607248 - 18607339
Alignment:
Q  88 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctc 179  Q
    ||||||| ||||||||||||| ||||| |  |  || |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||    
T  18607248 tccagaaaatacacaattaatcataatcaaactaatgcatcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc 18607339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20328256 - 20328214
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20328256 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 20328214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 10897016 - 10896982
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  10897016 tgactccacttgtgtatatctacatacaactcaac 10896982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 15142381 - 15142439
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||||||||||||||||||||||||||||| || |  ||||||| | |||||||||||    
T  15142381 gactccacttgtgtatatctacatacaactccacaatgcatatatataatatgacttac 15142439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 15167017 - 15167051
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  15167017 tgactccacttgtgtatatctacatacaactcaac 15167051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 16073963 - 16073905
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||||||||||||||||||||||||||||||||    ||||||| | |||||||||||    
T  16073963 gactccacttgtgtatatctacatacaactcaacagtgcatatatataatatgacttac 16073905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 16476130 - 16476072
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||| | |  ||||||| | |||||||||||    
T  16476130 gactccacttgtgtatatctacatacaactcatcaatgcatatatataatatgacttac 16476072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 82078 - 82041
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  82078 atgcaactgactcgacttgtgtatatctacatacaact 82041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11303020 - 11303064
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  11303020 atgcaactgac-ccacctgtgtatatctacatacaactcaactaca 11303064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12801298 - 12801261
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  12801298 atgcaacggactccacttgtgtatatctacatacaact 12801261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 14565887 - 14565920
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  14565887 gactccacttgtgtatatctacatacaactcaac 14565920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15097967 - 15097930
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  15097967 atgcaactgacttcacttgtgtatatctacatacaact 15097930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16187730 - 16187693
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  16187730 atgcaactgactccacttgtgtatatctacgtacaact 16187693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18607035 - 18607075
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  18607035 atgcaactgac-ccacttgtgtatatctacatacaactcaac 18607075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 428
Target Start/End: Complemental strand, 21231643 - 21231554
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttct 428  Q
    |||||||||||||||    ||||  ||||||||||| ||| |||||| ||  |||||| ||||||| | |||||||||||||||||||||    
T  21231643 cttcgcttaagcgacgaccagtttgcttaagcgaccagctcacagaaagttggggttccgctcgctgacggttcgcttgagcgaacttct 21231554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46348756 - 46348719
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  46348756 atgcaactgactccacttgtgtatatctacgtacaact 46348719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 147453 - 147556
Alignment:
Q  88 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 187  Q
    ||||||| ||||||||||||| ||||| |  |  || |||||| ||||||||| | | || || |||||||| |||||||||||||||||||  ||||||    
T  147453 tccagaaaatacacaattaatcataatcaaactaatgcatcaagttcattcaacatagtacatgttcacttggtttcatactcaatcatctc-caaattc 147551  T
Q  188 actaa 192  Q
    |||||    
T  147552 actaa 147556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 415
Target Start/End: Original strand, 2464758 - 2464838
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  2464758 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 2464838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 3858087 - 3858007
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  3858087 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 3858007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 14038758 - 14038790
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  14038758 actccacttgtgtatatctacatacaactcaac 14038790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 14348788 - 14348820
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  14348788 actccacttgtgtatatctacatacaactcaac 14348820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 21519246 - 21519210
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  21519246 actccacttgtgtatatcaacatacaactcaactaca 21519210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 45185629 - 45185692
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactcc 73  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||| | ||||||||||| |||||    
T  45185629 gactccacttgtgtatatctacatacaacttaacaatgcatatatat-atatgacttacaactcc 45185692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21232041 - 21231999
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  21232041 atgcaactgac-ccacttgtatatatctacatacaactcaacta 21231999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 457
Target Start/End: Complemental strand, 3858003 - 3857953
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatc-aaaacggtttttcgctcaca 457  Q
    |||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  3858003 ggttcgcttgagcgaactttgaacagaatcaaaaatggtttttcgctcaca 3857953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 14581444 - 14581414
Alignment:
Q  9 gactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||    
T  14581444 gactccacttgtgtatatctacatacaactc 14581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 16475983 - 16475929
Alignment:
Q  88 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaata 142  Q
    ||||||| ||||||||||||| ||||| |||| |||||||| | |||||||||||    
T  16475983 tccagaaaatacacaattaatcataatcatgctcatacatcgagttcattcaata 16475929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 415
Target Start/End: Complemental strand, 29181780 - 29181690
Alignment:
Q  325 ctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    ||||||||  |||| || ||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  29181780 ctgactaacactcagtttgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttcagttcgcttatgggtcgct 29181690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31154537 - 31154575
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  31154537 atgcgactaactccacttgtgtatatctacatacaactc 31154575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 11220118 - 11220081
Alignment:
Q  2 tgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  11220118 tgcaactaactccactggtgtatatctacatacaactc 11220081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 13678504 - 13678541
Alignment:
Q  5 aactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  13678504 aactgacttcacttgcgtatatctacatacaactcaac 13678541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 14255724 - 14255691
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  14255724 gactcaacttgtgtatatctacatacaactcaac 14255691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14281652 - 14281612
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  14281652 atgcaactgac-ccacttgtgtatatctacatacaacccaac 14281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14945872 - 14945836
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14945872 atgcaactgac-ccacttgtgtatatctacatacaact 14945836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15338995 - 15339035
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  15338995 atgcaactgac-ccacttgtgtatatctacatacaacccaac 15339035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15373465 - 15373429
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  15373465 atgcaactgac-ccacttgtgtatatctacatacaact 15373429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15437609 - 15437572
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  15437609 atgcaattgactccacttgcgtatatctacatacaact 15437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15710999 - 15710959
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  15710999 atgcaactgac-ccacttgtgtatatctacatacaacccaac 15710959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15723223 - 15723183
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  15723223 atgcaactgac-ccacttgtgtatatctacatacaacccaac 15723183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 32771677 - 32771706
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  32771677 gactccacttgtgtatatctacatacaact 32771706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35962744 - 35962704
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  35962744 atgcaactgac-ccacttgtgtatatctacatacaacccaac 35962704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 124467 - 124431
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  124467 gactccacttgtgtatatcagcatacaactcaactac 124431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 2966383 - 2966431
Alignment:
Q  358 agttcacttaagcgaccggcttacagaaggtctgggttctgctcgctta 406  Q
    ||||| ||||||||||| |||||||| |||||||||||| | |||||||    
T  2966383 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgctta 2966431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 8776164 - 8776200
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  8776164 gactcgacttgtgtatatcaacatacaactcaactac 8776200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 12710483 - 12710435
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    |||||||||||||||||||   |||||||||||| ||||||| ||||||    
T  12710483 ggttcgcttgagcgaactttggacagaatcaaaatggtttttggctcac 12710435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 13318007 - 13318051
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacat 127  Q
    ||||||||||||  |||||||||||| |||||||||| |||||||    
T  13318007 aacaatccagaaattacacaattaatcataattatgcgcatacat 13318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 15725572 - 15725608
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  15725572 gactccacttgtgtatatcagcatacaactcaactac 15725608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 16006219 - 16006255
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  16006219 gactcgacttgtgtatatcaacatacaactcaactac 16006255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 17506080 - 17506044
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  17506080 gactcaacttgtgtatatcaacatacaactcaactac 17506044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 17547134 - 17547170
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  17547134 gactcaacttgtgtatatcaacatacaactcaactac 17547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 20907086 - 20907038
Alignment:
Q  358 agttcacttaagcgaccggcttacagaaggtctgggttctgctcgctta 406  Q
    ||||| ||||||||||| |||||||| |||||||||||| | |||||||    
T  20907086 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgctta 20907038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 21743603 - 21743567
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  21743603 gactccacttgtgtatatcagcatacaactcaactac 21743567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 23442400 - 23442432
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaa 41  Q
    ||||| |||||||||||||||||||||||||||    
T  23442400 gactcaacttgtgtatatctacatacaactcaa 23442432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 38828049 - 38828085
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  38828049 gactccacttgtgtatatcagcatacaactcaactac 38828085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 7e-53; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 18 - 459
Target Start/End: Complemental strand, 8046889 - 8046420
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| | || || |  |||||| | |||||||||||| |||||||||    
T  8046889 tgtgtatatctacatacaactcgactattacatatatttcatatgacttactactcc-acaactc-agtaatccaaatcatacacaattatttataatta 8046792  T
Q  117 tgcacatacatcaatttcattcaa-----------------taaat-tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaa 198  Q
    |||||| ||||||||  ||||| |                 || || |||||||||||||| |||||||| |||||||||| || ||| ||||||| |||    
T  8046791 tgcacacacatcaatcacattccacatgttatatatatatatatatatatatattcacttgttttcatacacaatcatctccaacatttactaacaccaa 8046692  T
Q  199 ccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgt 298  Q
     |||| | ||| || |||||||||| |||||||| | |||||| || |||||||||| ||||||||   |  || ||||||||||||||||||||||| |    
T  8046691 tcaatccaatcgccggcttgttctaataggattcggttacctacaccagggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcat 8046592  T
Q  299 gcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctg 398  Q
    |||| ||| || | |||| ||| ||||||||||||||||||||||||||||||||   ||| || |||||||||||  |||| || |||||||||||| |    
T  8046591 gcactaagtaacagttcagaaaaaggctgactaaggctcacttcgcttaagcgacgtctagctcgcttaagcgaccaacttatagtaggtctgggttcag 8046492  T
Q  399 ctcgctt-----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
     ||||||           | |||||||||||||||||||   |||||||||||| |||||||||||||||||    
T  8046491 ttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 8046420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 339 - 462
Target Start/End: Original strand, 15407485 - 15407608
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    ||||||||||||||| |  ||||| ||||||||||||||| |||||| |||| ||||| ||||||| | |||||||||||||||||||||  ||||||||    
T  15407485 cttcgcttaagcgacggccagttcgcttaagcgaccggctcacagaaagtctaggttccgctcgctgacggttcgcttgagcgaacttctggcagaatca 15407584  T
Q  439 aaacggtttttcgctcacaggttc 462  Q
    ||| ||||||||||| || |||||    
T  15407585 aaatggtttttcgcttacgggttc 15407608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 425
Target Start/End: Original strand, 14486052 - 14486154
Alignment:
Q  323 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcga 422  Q
    ||||||||||||||||||||||||||||||  | | | || |||||||||||||||||||||  || ||||||| ||||||| | |||||||||||||||    
T  14486052 ggctgactaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacagagagtttgggttccgctcgctcacggttcgcttgagcga 14486151  T
Q  423 act 425  Q
    |||    
T  14486152 act 14486154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 14555938 - 14555881
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 140  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  14555938 aacaatccagaacaaacacaattaattataattatgctcatacatcaatttcattcaa 14555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 374
Target Start/End: Original strand, 11847397 - 11847537
Alignment:
Q  234 gatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaa 332  Q
    |||||||||||||| |||||||||| || | |||||| ||   ||| ||||| | | |||||| |||||| |||||||  |||| |||||||||||||||    
T  11847397 gatacctatacaagagttatacaagctagaagaaacacttacaaatactcaaaagggtcccctagtgcacaaagcaaag-ttcagaaagaggctgactaa 11847495  T
Q  333 ggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    ||||||  ||||||||||||| | |||||| |||||||||||    
T  11847496 ggctcagctcgcttaagcgacgggtagttcgcttaagcgacc 11847537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14048371 - 14048416
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14048371 atgcaactgactccacttgtgtatatctacatacaactcaactaca 14048416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 14485975 - 14486037
Alignment:
Q  222 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaa 285  Q
    |||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  14485975 tagtaggatt-tgatacctatacaagggttatacaagctgaaagaaacattttagaatgctcaa 14486037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 459
Target Start/End: Original strand, 53483022 - 53483171
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttctgctcgctt-----------aggg 409  Q
    ||||||||||||| |||||||||||||||||| |  ||||| ||||||||||| |||||||| ||| |||||| || | ||||||           | ||    
T  53483022 aggctgactaaggttcacttcgcttaagcgacggcaagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctcacgg 53483121  T
Q  410 ttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||    
T  53483122 ttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 53483171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17176535 - 17176576
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17176535 atgcaactgactccacttgtgtatatctacatacaactcaac 17176576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 16147514 - 16147412
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || ||    
T  16147514 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttcagttcgcttacgggtc 16147415  T
Q  413 gct 415  Q
    |||    
T  16147414 gct 16147412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 30237929 - 30237987
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  30237929 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 30237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2585176 - 2585135
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  2585176 atgcaactgactccacttgtgcatatctacatacaactcaac 2585135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 8834185 - 8834297
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||| | | | | || ||||| |||||||||| |||||||| ||||||||||| |       
T  8834185 tatacaaaggttatacaagttgaaagaaacattttagaacgctcaaaaggattctctagtgcatgaagcaaaaa-tcaaaaagtggctgactaagacctt 8834283  T
Q  339 cttcgcttaagcga 352  Q
    ||||||||||||||    
T  8834284 cttcgcttaagcga 8834297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12932012 - 12932049
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12932012 atgcaactgactccacttgtgtatatctacatacaact 12932049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15360829 - 15360792
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15360829 atgcaactgactccacttgtgtatatctacatacaact 15360792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16147771 - 16147730
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  16147771 atgcaactgactccacttgtgtatatctgcatacaactcaac 16147730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 406
Target Start/End: Original strand, 27905613 - 27905729
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    |||||||  ||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||  | ||| || ||||||||| | ||| ||| |||||    
T  27905613 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcgatcagctcacaaaaggt 27905711  T
Q  389 ctgggttctgctcgctta 406  Q
      ||||| ||||||||||    
T  27905712 tggggttttgctcgctta 27905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 384
Target Start/End: Original strand, 15244566 - 15244658
Alignment:
Q  292 ccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    |||| ||||||||||||||| ||||||||| ||||||||||| |   ||||| ||||||||| | |   || |||||||||||||||||||||    
T  15244566 ccctagtgcacgaagcaaaatttcaaaaagtggctgactaagaccttcttcgattaagcgacggttgactcgcttaagcgaccggcttacaga 15244658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40908754 - 40908792
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  40908754 atgcaactgactccgcttgtgtatatctacatacaactc 40908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 13886848 - 13886881
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  13886848 gactccacttgtgtatatctacatacaactcaac 13886881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 13887714 - 13887747
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  13887714 gactccacttgtgtatatctacatacaactcaac 13887747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 15244281 - 15244314
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  15244281 gactccacttgtgtatatctacatacaactcaac 15244314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15533954 - 15533998
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  15533954 atgcaactgac-ccacctgtgtatatctacatacaactcaactaca 15533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18166292 - 18166255
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||| |||||||||||||||||||||||||||||||    
T  18166292 atgcaattgactccacttgtgtatatctacatacaact 18166255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18212307 - 18212347
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  18212307 atgcaactgac-ccacttgtgtatatctacatacaactcaac 18212347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 18212523 - 18212623
Alignment:
Q  91 agaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcact 190  Q
    |||| ||||||||||||| ||||| |  |  || |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||  |||||||||    
T  18212523 agaaaatacacaattaatcataatcaaactaatgcatcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattcact 18212621  T
Q  191 aa 192  Q
    ||    
T  18212622 aa 18212623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 18261479 - 18261512
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  18261479 gactccacttgtgtatatctacatacaactcaac 18261512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 18271444 - 18271477
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  18271444 gactccacttgtgtatatctacatacaactcaac 18271477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 27849470 - 27849437
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  27849470 gactccacttgtgtatatctacatacaactcaac 27849437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30146937 - 30146978
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  30146937 atgcaactgactccacttgtgtatatgtagatacaactcaac 30146978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 4831087 - 4831031
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||| | |||||||||    
T  4831087 gactccacttgtgtatatatacatacaactcaacaatgcatatatatgatatgactt 4831031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 4834382 - 4834326
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||| | |||||||||    
T  4834382 gactccacttgtgtatatatacatacaactcaacaatgcatatatatgatatgactt 4834326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 31117328 - 31117292
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31117328 gactccacttgtgtatatcaacatacaactcaactac 31117292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1651064 - 1651021
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||    
T  1651064 atgcaactgactccgcttgtgtatatctacttacaactccacta 1651021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 414
Target Start/End: Original strand, 13887086 - 13887258
Alignment:
Q  242 tacaagggttatacaagttaaaggaaacatttt-agaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcac 339  Q
    ||||| ||||||||||||| || |||||||||| | |||| |||| | | | |||| ||||||||||||||| ||||||| | |||| |||||| |   |    
T  13887086 tacaaaggttatacaagttgaaagaaacatttttaaaatgttcaaaaggattccctagtgcacgaagcaaaa-ttcaaaa-gtggctaactaagaccttc 13887183  T
Q  340 ttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgc 414  Q
    |||||||||||||| | | | || ||||| |||||||||||||||  ||  | |||||||||||| | |||||||    
T  13887184 ttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttggcgttctgctcgctaatggttcgc 13887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 414
Target Start/End: Original strand, 13887943 - 13888115
Alignment:
Q  242 tacaagggttatacaagttaaaggaaacatttt-agaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcac 339  Q
    ||||| ||||||||||||| || |||||||||| | |||| |||| | | | |||| ||||||||||||||| ||||||| | |||| |||||| |   |    
T  13887943 tacaaaggttatacaagttgaaagaaacatttttaaaatgttcaaaaggattccctagtgcacgaagcaaaa-ttcaaaa-gtggctaactaagaccttc 13888040  T
Q  340 ttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgc 414  Q
    |||||||||||||| | | | || ||||| |||||||||||||||  ||  | |||||||||||| | |||||||    
T  13888041 ttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttggcgttctgctcgctaatggttcgc 13888115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 14821536 - 14821594
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||| |||||||||||||||||||||||||||| |   |||||| | |||||||||||    
T  14821536 gactcaacttgtgtatatctacatacaactcaacaatgaatatatataatatgacttac 14821594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 14910824 - 14910858
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||| |||||||||||||||    
T  14910824 tgactccacttgtgtatatatacatacaactcaac 14910858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 384
Target Start/End: Original strand, 15307415 - 15307563
Alignment:
Q  240 tatacaagggttatacaagtt---aaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggc 335  Q
    ||||||| |||||||||||||   |||  |||||||||| ||||||| | | | | |||| ||||||||||||||  ||| ||||| ||||||||||| |    
T  15307415 tatacaaaggttatacaagttgaaaaaaaaaacattttaaaatgctcgaaaggattccctagtgcacgaagcaaagtttcgaaaagtggctgactaagac 15307514  T
Q  336 tcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
       ||||||||||||||  | | | || |||||||||||| ||||||||    
T  15307515 cttcttcgcttaagcgatggctggctcgcttaagcgaccgacttacaga 15307563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15407081 - 15407118
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15407081 atgcaactgac-ccacttgtgtatatctacatacaactc 15407118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 53905321 - 53905283
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  53905321 atgcaactcactccacttgtgtatatttacatacaactc 53905283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 8833954 - 8833987
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| |||||||||||||||||||||||||||    
T  8833954 gactcctcttgtgtatatctacatacaactcaac 8833987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 10972902 - 10972873
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  10972902 gactccacttgtgtatatctacatacaact 10972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14485681 - 14485717
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14485681 atgcaactgac-ccacttgtgtatatctacatacaact 14485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14910756 - 14910792
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14910756 atgcaactgac-ccacttgtgtatatctacatacaact 14910792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 15307183 - 15307216
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||| ||||||||||||||||||||||||||    
T  15307183 gactccatttgtgtatatctacatacaactcaac 15307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16156804 - 16156844
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  16156804 atgcaactgac-ccactcgtgtatatctacatacaactcaac 16156844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16229125 - 16229088
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||| | |||||||||||||||||||||||||    
T  16229125 atgcaactgattgcacttgtgtatatctacatacaact 16229088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17000174 - 17000134
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  17000174 atgcaactgac-ccacttgtgtatatctacatacaacccaac 17000134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23121769 - 23121809
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  23121769 atgcaactgac-ccacttgtgtatatctacatacaacccaac 23121809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 26077707 - 26077678
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  26077707 ccacttgtgtatatctacatacaactcaac 26077678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41529091 - 41529054
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  41529091 atgcaactaactccacttgtgtatatctacatataact 41529054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 4170827 - 4170863
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  4170827 gactccacttgtgtatatcagcatacaactcaactac 4170863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14063080 - 14063116
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  14063080 atgcaactaactccacttgtgtatacctacatacaac 14063116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 14698519 - 14698555
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  14698519 gactccacttgtgtatatcagcatacaactcaactac 14698555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 15075466 - 15075498
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||| ||||||||||||||    
T  15075466 actccacttgtgtatatcaacatacaactcaac 15075498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 15318099 - 15318135
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| | ||||||||||||||||    
T  15318099 actccacttgtgtatatcaatatacaactcaactaca 15318135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 41791473 - 41791509
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  41791473 gactcgacttgtgtatatcaacatacaactcaactac 41791509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 53388013 - 53387977
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  53388013 gactcaacttgtgtatatcaacatacaactcaactac 53387977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 55503023 - 55502987
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  55503023 gactccacttgtgtatatcagcatacaactcaactac 55502987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 456
Target Start/End: Complemental strand, 9624 - 9167
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || || | |||||||||||||| ||||||| ||||||| |    
T  9624 tgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caatccagaacatatacaattatttataatca 9527  T
Q  117 tgcacatacatcaatttcattca-------ataaat-tata--tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcg 206  Q
    |||||||||||||||  ||||||       ||| || ||||  |||||||||  |||||||| |||||| | | || ||| |||||   ||| |||| |     
T  9526 tgcacatacatcaatcacattcatcatgttatacatatatacgtattcacttattttcatacacaatcaacaccaacatttactaatgccaatcaatcca 9427  T
Q  207 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 306  Q
     ||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  ||  |||||||||||||||||||||| ||||| |||    
T  9426 gtcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttacagaatgctcaagaagtcccctcatgcactaag 9327  T
Q  307 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctt- 405  Q
     |||| || | ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||     
T  9326 taaaagtttagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgctta 9228  T
Q  406 ----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
              | |||||||||||||||||||   |||||||||||| ||||||||||||||    
T  9227 tgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 415
Target Start/End: Original strand, 23865619 - 23866026
Alignment:
Q  18 tgtgtatatctacatacaactcaactaca-catatatttcatat-gacttactactccgaaaattctaacaatccagaacatacacaattaattataatt 115  Q
    |||||||||||||||||||||||||||   |||||||||||||| |||||||||||||| || |   |||||| ||||||||||||||||| ||||||||    
T  23865619 tgtgtatatctacatacaactcaactaatgcatatatttcatattgacttactactccgtaactc--aacaattcagaacatacacaattatttataatt 23865716  T
Q  116 atgcacatacatcaatttcattcaataaattata----------tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattc 205  Q
    ||||||||||||||||  |||||   |  |||||          |||||||||  || ||||| ||||||   | || ||| ||||| | ||| |||| |    
T  23865717 atgcacatacatcaatcacattcctcatgttatacatatacacgtattcacttatttacatacacaatcaataccaacatttactaataccaatcaatcc 23865816  T
Q  206 gatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaa 305  Q
     |||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||    
T  23865817 aatcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaa 23865916  T
Q  306 gcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctt 405  Q
    | || | |||| ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||    
T  23865917 gtaatagttcagaaaaaggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgctt 23866016  T
Q  406 agggttcgct 415  Q
    | || |||||    
T  23866017 acgggtcgct 23866026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 19902920 - 19902808
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | || ||  ||||||||||||||||||||||| ||||||| |    
T  19902920 tgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactc-gacaatccagaacatacacaattatttataatca 19902823  T
Q  117 tgcacatacatcaat 131  Q
    |||||||||||||||    
T  19902822 tgcacatacatcaat 19902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 339 - 462
Target Start/End: Complemental strand, 14057271 - 14057148
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    ||||||||||||||| | ||| || ||||||||||||||| |||||| |||||||||| ||||||| | ||||||||||||||||||| |  ||||||||    
T  14057271 cttcgcttaagcgacggctagctcgcttaagcgaccggctcacagaaagtctgggttccgctcgctgacggttcgcttgagcgaacttatggcagaatca 14057172  T
Q  439 aaacggtttttcgctcacaggttc 462  Q
    ||| |||||||| ||||| |||||    
T  14057171 aaatggtttttcactcacgggttc 14057148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 339 - 462
Target Start/End: Original strand, 25111385 - 25111508
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    ||||||||||||||| |  ||||| |||||||||||| || |||||| |||||||||| ||||||| | |||||||||||||||||||||  ||||||||    
T  25111385 cttcgcttaagcgacggccagttcgcttaagcgaccgactcacagaaagtctgggttccgctcgctgacggttcgcttgagcgaacttctggcagaatca 25111484  T
Q  439 aaacggtttttcgctcacaggttc 462  Q
    ||| ||||||||||| || |||||    
T  25111485 aaatggtttttcgcttacgggttc 25111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 19988045 - 19987990
Alignment:
Q  85 caatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 140  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19988045 caatccagaacatacacaattaattacaattatgctcatacatcaatttcattcaa 19987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 417
Target Start/End: Original strand, 18613409 - 18613697
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| |||||||||   | ||||| ||||| || ||||||||||||||||||| ||| ||||||||  ||||| |||||||| ||||  |  ||| ||    
T  18613409 catcaagttcattcaacgtagtatatgttcacatggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaagtgtttc-ag 18613506  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    |||||||| | |   |||| || ||||||||||||| || | ||||||||  ||||||||||| | |||||| |||||||| |||||  ||||||| | |    
T  18613507 taggattcag-tgtatatataaaggttatacaagttgaaaggaacatttttaaatgctcaagaggatcccctagtgcacgaggcaaag-ttcaaaa-gtg 18613603  T
Q  324 gctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttg 417  Q
    || |||||||| ||| ||||||||||||||| | | |||| ||||||||||| |||||||||  ||  |||||| ||||||| | ||||||||||    
T  18613604 gccgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgacctgcttacagagagttggggttccgctcgctaacggttcgcttg 18613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 415
Target Start/End: Complemental strand, 24321376 - 24321252
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  24321376 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 24321279  T
Q  389 ctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | ||||||| || |||||    
T  24321278 ctgggttcagttcgcttacgggtcgct 24321252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21683695 - 21683654
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21683695 atgcaactgactccacttgtgtatatctacatacaactcaac 21683654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21688044 - 21688003
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21688044 atgcaactgactccacttgtgtatatctacatacaactcaac 21688003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8729017 - 8728979
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8729017 atgcaactgactccacttgtgtatatctacatacaactc 8728979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10607103 - 10607141
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10607103 atgcaactgactccacttgtgtatatctacatacaactc 10607141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19859681 - 19859719
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19859681 atgcaactgactccacttgtgtatatctacatacaactc 19859719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 409
Target Start/End: Original strand, 21931018 - 21931187
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaaattcaaaaagaggctga-ctaaggct 336  Q
    ||||||| ||||||||||||| || ||||||||||||||||||| ||| |  | |||| ||| | |||||||||  |||||||| |||||| | |||||     
T  21931018 tatacaaaggttatacaagttgaaagaaacattttagaatgctc-agatggattccctagtggaggaagcaaaa--tcaaaaagtggctgaccaaaggcc 21931114  T
Q  337 cacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttaggg 409  Q
      ||||||||||||||  | | ||||||||||||||||| ||||||||  ||  | |||||||||||| ||||    
T  21931115 ttcttcgcttaagcgaaggctggttcacttaagcgaccgacttacagagagttggtgttctgctcgctaaggg 21931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22743876 - 22743942
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||||| |||||||||||||||||||||||||||||||||| |  |||||||   |||||||||||    
T  22743876 atgcaacagactccacttgtgtatatctacatacaactcaacaatgcatatatagaatatgacttac 22743942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21690437 - 21690400
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21690437 atgcaactgactccacttgtgtatatctacatacaact 21690400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24321608 - 24321567
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  24321608 atgcaactgactccacttgtgtatatctgcatacaactcaac 24321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36445756 - 36445719
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36445756 atgcaactgactccacttgtgtatatctacatacaact 36445719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 21282240 - 21282300
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactc 72  Q
    |||||||||||||||||||||||||||||| | |||||||| | |||||||||||| ||||    
T  21282240 ccacttgtgtatatctacatacaactcaaccatacatatatgtacatatgacttacaactc 21282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21300150 - 21300114
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  21300150 atgcaactgactccacttgtgtatatctacatacaac 21300114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 20839927 - 20839856
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  20839927 caactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 20839856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21322267 - 21322200
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttac 67  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| ||||||||||||||    
T  21322267 atgcaactaactccacttgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttac 21322200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 8728950 - 8728916
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  8728950 tgactccacttgtgtatatctacatacaactcaac 8728916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 20005621 - 20005563
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||| | |||||||||||    
T  20005621 gactccacttgtgtatatctacatacaacttaacaatgcatatatataatatgacttac 20005563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 20012179 - 20012146
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  20012179 gactccacttgtgtatatctacatacaactcaac 20012146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20783877 - 20783840
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20783877 atgcaactgactccccttgtgtatatctacatacaact 20783840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22063594 - 22063554
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  22063594 atgcaactgac-ccacttgtgtatatctacatacaactcaac 22063554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22176066 - 22176026
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  22176066 atgcaactgac-ccacttgtgtatatctacatacaactcaac 22176026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 39363663 - 39363696
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  39363663 gactccacttgtgtatatctacatacaactcaac 39363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 15267297 - 15267333
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15267297 actccacttgtgtatatcaacatacaactcaactaca 15267333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 22521865 - 22521829
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  22521865 actccacttgtgtatatcaacatacaactcaactaca 22521829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Original strand, 17054009 - 17054060
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  17054009 ggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 17054060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21326855 - 21326788
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttac 67  Q
    |||||||| | |||||||||||||||||||||||||||  || |  ||||||| ||||||||||||||    
T  21326855 atgcaactaaatccacttgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttac 21326788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 25111022 - 25111053
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  25111022 ccacttgtgtatatctacatacaactcaacta 25111053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 17053778 - 17053870
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaatta 106  Q
    |||| |||||||||||||||||||||| || || |||||| | ||||||||| ||||||||| | || || |||||||||| || ||||||||||    
T  17053778 ccacctgtgtatatctacatacaactcgaccactacatatgtatcatatgacatactactcc-acaactcaaacaatccag-acttacacaatta 17053870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 20005473 - 20005423
Alignment:
Q  89 ccagaacatacacaattaattataattatgcacatacatcaatttcattca 139  Q
    |||||| ||||||||| ||| ||||| ||||||||||||||| ||||||||    
T  20005473 ccagaaaatacacaatcaatcataatcatgcacatacatcaagttcattca 20005423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 23652982 - 23652916
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatattt-catatgacttactactccg 74  Q
    |||||||||| ||||||||||||||||||| ||| |  |||||||||  ||||||||||| ||||||    
T  23652982 gactccacttctgtatatctacatacaacttaacaatgcatatatttatatatgacttacaactccg 23652916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41009466 - 41009428
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  41009466 atgcaactaactccactggtgtatatctacatacaactc 41009428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 20006401 - 20006430
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  20006401 gactccacttgtgtatatctacatacaact 20006430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22025591 - 22025551
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  22025591 atgcaactgac-ccacttgtctatatctacatacaactcaac 22025551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 7301352 - 7301316
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  7301352 gactcgacttgtgtatatcaacatacaactcaactac 7301316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 17795222 - 17795258
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  17795222 gactcaacttgtgtatatcaacatacaactcaactac 17795258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21669031 - 21669078
Alignment:
Q  5 aactgactccacttgtgtatatctacatacaactcaactacacatatat 53  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||||    
T  21669031 aactgactc-acttgtgtatatatacatacaactcaaccatacatatat 21669078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22177755 - 22177790
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22177755 atgcaactgac-ccacttgtgtatatctacatacaac 22177790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 23647561 - 23647529
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||| ||||||||    
T  23647561 actccacttgtgtatatctacatataactcaac 23647529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 23866030 - 23866078
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    |||||||||||||||||||   |||||||||||| ||||||||| ||||    
T  23866030 ggttcgcttgagcgaactttggacagaatcaaaatggtttttcgatcac 23866078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 28853776 - 28853812
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  28853776 gactccacttgtgtatatcagcatacaactcaactac 28853812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 45135225 - 45135189
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  45135225 gactcgacttgtgtatatcaacatacaactcaactac 45135189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 146 - 415
Target Start/End: Original strand, 324 - 592
Alignment:
Q  146 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctataca 245  Q
    |||||||||||||| |||||||| | |||||||| || ||| ||||||| ||| |||| | |||||  |||||||||| |||||||| | |||||| ||     
T  324 tatatattcacttgttttcatacaccatcatctccaacatttactaacaccaatcaatccaatcactggcttgttctaataggattcggttacctacacc 423  T
Q  246 agggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgct 345  Q
    | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || | |||| ||| |||||||||||| |||||||||||    
T  424 aaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaa-aggctgactaagactcacttcgct 522  T
Q  346 taagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | |||||| ||||||||||| |||||||| |||||||||||| | ||||||| || |||||    
T  523 taagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgct 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 157 - 269
Alignment:
Q  18 tgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataatta 116  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |  || |||||||||||||||||||||||| |||||||||    
T  157 tgtgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acagctc-aacaatccagaacatacacaattatttataatta 254  T
Q  117 tgcacatacatcaat 131  Q
    |||||| ||||||||    
T  255 tgcacacacatcaat 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 240 - 459
Target Start/End: Original strand, 10610 - 10829
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgct-caagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    |||| ||||||||||||||||||| |  |||| ||  |||||| ||||   ||||||  ||||||| |||||  ||||||||| |||||||||||    |    
T  10610 tatataagggttatacaagttaaaagggacatgtttaaatgctacaagggatcccctaatgcacgaggcaaag-ttcaaaaagtggctgactaagatcaa 10708  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttagggttcgcttgagcgaacttctgacagaatca 10808  T
Q  439 aaacggtttttcgctcacagg 459  Q
    ||| |||||||||||||||||    
T  10809 aaatggtttttcgctcacagg 10829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 7667 - 7517
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaa 182  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| ||    
T  7667 aacaacccagaacatacccaattaattataattatgctcatacatcaatttcattcaacatactatatattcacttgatttcatactcaatcatctccaa 7568  T
Q  183 aattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctg 234  Q
    ||||||||||| ||||| |||||||||||| |  | || |||||||||||||    
T  7567 aattcactaac-tcaactaattcgatcaccggagtattttagtaggattctg 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14804 - 14763
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  14804 atgcgactgactccacttgtgtatatctacatacaactcaac 14763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7814 - 7742
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactccg 74  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| |  ||||| ||||||||||||| | ||||||    
T  7814 atgcaactgac-ccaattgtgtatatctacatacaacttaacaatgcatatgtttcatatgacttgcaactccg 7742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6789 - 6748
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| |||||| |||||||||||| |||||||||||||||    
T  6789 atgcaattgactcaacttgtgtatatttacatacaactcaac 6748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 235 - 424
Target Start/End: Original strand, 30194 - 30383
Alignment:
Q  235 atacctatacaagggttatacaagttaaaggaaacattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaag 333  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| |  ||||||| ||||||||||| |||||||| |||| |||||||||||    
T  30194 atacctatacaagggttatacaagttgaaagaaacattttagaatgctcaaaagggtcccctagtgcacgaagc-aaaattcagaaagtggctgactaag 30292  T
Q  334 gctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaac 424  Q
    |||||||||||||||||||  | | | || |||||||||||||||||||||| || | ||||  ||||||| | |||||||||||| ||||    
T  30293 gctcacttcgcttaagcgaaggttggctcgcttaagcgaccggcttacagaaagtttaggtttcgctcgctcacggttcgcttgagtgaac 30383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 29927 - 29956
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  29927 ccacttgtgtatatctacatacaactcaac 29956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 83; Significance: 4e-39; HSPs: 4)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 127 - 384
Target Start/End: Complemental strand, 82082 - 81826
Alignment:
Q  127 tcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagta 226  Q
    |||| ||||||||| | | |||||||||||||| |||||||||||| ||| || ||||||||||||  |||||||||||||  ||||   ||||  ||||    
T  82082 tcaagttcattcaacataatatatattcacttggtttcatactcaaacatatccaaaattcactaaattcaaccaattcgactaccaatgtgtttaagta 81983  T
Q  227 ggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggc 325  Q
    |||||| | | | ||||||||||||||||||||| || ||||||||||| ||||||||| | | | |||| ||| ||||||||||| ||||||||| |||    
T  81982 ggattcag-tgcatatacaagggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctggtgtacgaagcaaaa-ttcaaaaagtggc 81885  T
Q  326 tgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    |||||||| |  |||||||||||||||| | | | || |||||||||||| ||||||||    
T  81884 tgactaagacctacttcgcttaagcgacggctggctcgcttaagcgaccgacttacaga 81826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 80174 - 80072
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| |||||||||||| | ||||||| || ||    
T  80174 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttcagttcgcttacgggtc 80075  T
Q  413 gct 415  Q
    |||    
T  80074 gct 80072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 80431 - 80390
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  80431 atgcaactgactccacttgtgtatatctgcatacaactcaac 80390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 72902 - 72869
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  72902 gactccacttgtgtatatctacatacaactcaac 72869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 83; Significance: 4e-39; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 441
Target Start/End: Original strand, 116052 - 116366
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  116052 catcaagttcattcaacatagtatatgttcacttgatttcatactcaatcatctcaaaa-ttcactaaactcaactaattcgattaccaaggtgtttcag 116150  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    |||||||| | |   |||| || ||||||||| ||| || ||||||||||| ||| ||||| | | |||||| |||||||| |||||  ||||||||  |    
T  116151 taggattcag-tgtgtatataaaggttatacaggttgaaagaaacattttaaaatactcaaaaggatcccctagtgcacgaggcaaag-ttcaaaaaatg 116248  T
Q  324 gctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcga 422  Q
    ||||||||||| ||| ||||||||||||||| | | |||| |||||||||||||||||||||  ||  || ||  ||||||| | |||||||||||||||    
T  116249 gctgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacagagagttgggatttcgctcgctaacggttcgcttgagcga 116347  T
Q  423 acttctaacagaatcaaaa 441  Q
    |||||| ||||||| ||||    
T  116348 acttctgacagaatgaaaa 116366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 428
Target Start/End: Complemental strand, 129393 - 129204
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctc 337  Q
    ||||||| ||||||||||||| |||||||||||| | || ||||||| | | |||||| ||||||||||||||| ||||||||| ||||||||||| |      
T  129393 tatacaaaggttatacaagttgaaggaaacatttcaaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagacct 129295  T
Q  338 acttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttct 428  Q
     ||||||||||||||| | | | || ||||||||||||||| |||||| ||  |||||| ||||||| | ||||||||| |||||||||||    
T  129294 tcttcgcttaagcgacggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggttcgcttaagcgaacttct 129204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 129697 - 129656
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  129697 atgcaactgactccacttgtgtatatctacatacaactcaac 129656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 129626 - 129592
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  129626 tgactccacttgtgtatatctacatacaactcaac 129592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 384269 - 384305
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  384269 actccacttgtgtatatcaacatacaactcaactaca 384305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 326942 - 326980
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  326942 atgcaactaactccccttgtgtatatctacatacaactc 326980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 115905 - 115941
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  115905 atgcaacagactccactggtgtatatctacatacaac 115941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 2e-38; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 100 - 428
Target Start/End: Original strand, 65265 - 65592
Alignment:
Q  100 acaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaac 199  Q
    ||||||||| ||||| || |  || |||||| ||||||||| | | |||||||||||||| |||||||||||||||  || ||||||||||||  | |||    
T  65265 acaattaataataatcatactaatgcatcaagttcattcaacatagtatatattcacttggtttcatactcaatcaaatccaaaattcactaaacttaac 65364  T
Q  200 caattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgt 298  Q
    ||||||||| ||||   |||| ||||||||||| | | | |||| ||  |||||||||||| || ||||||||||| |||| |||| | | |||||| ||    
T  65365 caattcgattaccaatgtgttttagtaggattcag-tgcatatataaaagttatacaagttgaaagaaacattttaaaatgttcaaaaggatcccctagt 65463  T
Q  299 gcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctg 398  Q
    |||||| |||||| ||||||||| ||||||||||||    || |||||||| ||| | | |||| |||||||||||||||||||||  ||  |||||| |    
T  65464 gcacgaggcaaaa-ttcaaaaagtggctgactaaggtcttctccgcttaagtgacggctggttcgcttaagcgaccggcttacagagagttggggttccg 65562  T
Q  399 ctcgcttagggttcgcttgagcgaacttct 428  Q
    |||||| | |||||| || |||||||||||    
T  65563 ctcgctaacggttcggttaagcgaacttct 65592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 65140 - 65178
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  65140 atgcaactgactccacttgtgtatatctacatacaactc 65178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 1274 - 1336
Alignment:
Q  146 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgat 208  Q
    ||||| |||||||| |||||||||||||||| || |||| |||||||  ||||||||||||||    
T  1274 tatatgttcacttggtttcatactcaatcatatccaaaactcactaaattcaaccaattcgat 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 1137 - 1170
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  1137 gactccacttgtgtatatctacatacaactcaac 1170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 92662 - 92629
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||| |||||||||||||||||||||||||    
T  92662 gactccacctgtgtatatctacatacaactcaac 92629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 13 - 459
Target Start/End: Original strand, 23527630 - 23528099
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || || |||||||| |  ||||||||| ||||    
T  23527630 ccacctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaataatccaga-ctgacacaattatttat 23527727  T
Q  112 aattatgcacatacatcaatttcattcaataaattatatat------------tcacttgatttcatactcaatcatctcaaaaattcactaacatcaac 199  Q
    ||||||||||||||||||||  ||||| | |  ||||||||            ||||||| ||||| || ||| |||||| || ||| ||||||| |||     
T  23527728 aattatgcacatacatcaatcacattccacatgttatatatatacatacatattcacttgctttcacacccaaacatctccaacatttactaacaccaat 23527827  T
Q  200 ca-attcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgt 298  Q
    || || | | |||| | |||||||| |||||||  | |||||| || |||||||||| ||||||||   |  ||  |||| ||||||||||||||||| |    
T  23527828 catatccaaacaccggattgttctaataggatttggttacctacaccagggttatactagttaaagaggaagttaaagaacgctcaagaagtcccctcat 23527927  T
Q  299 gcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaagg-tctgggttct 397  Q
    |||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||| |||||||||     
T  23527928 gcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttca 23528026  T
Q  398 gctcgctt-----------agggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    | ||||||           | |||||||||||||||||||   ||||||| |||| |||||||||||||||||    
T  23528027 gttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 23528099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22232493 - 22232436
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 140  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22232493 aacaatccagaacatacacgattaattataattatgctcatacatcaatttcattcaa 22232436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 417
Target Start/End: Complemental strand, 18408685 - 18408521
Alignment:
Q  253 tacaagttaaaggaaacattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcactt-cgcttaagc 350  Q
    |||||||| || | ||||||| | ||||||||| | | |||||| |||||||| |||||  ||||||||| |||||||||||| ||| || |||||||||    
T  18408685 tacaagttgaaaggaacatttaaaaatgctcaaaagaatcccctagtgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcattttcgcttaagc 18408588  T
Q  351 gacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttg 417  Q
    ||| | |||||  |||||||||||||||||||||| ||  |||||| ||||||| | ||||||||||    
T  18408587 gacggctagtttgcttaagcgaccggcttacagaaagttggggttccgctcgctaacggttcgcttg 18408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20780863 - 20780904
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20780863 atgcaactgactccacttgtgtatatctacatacaactcaac 20780904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22336359 - 22336400
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22336359 atgcaactgactccacttgtgtatatctacatacaactcaac 22336400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22339897 - 22339938
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22339897 atgcaactgactccacttgtgtatatctacatacaactcaac 22339938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22466897 - 22466938
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22466897 atgcaactgactccacttgtgtatatctacatacaactcaac 22466938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37599211 - 37599170
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37599211 atgcaactgactccacttgtgtatatctacatacaactcaac 37599170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37599292 - 37599251
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37599292 atgcaactgactccacttgtgtatatctacatacaactcaac 37599251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42960332 - 42960373
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42960332 atgcaactgactccacttgtgtatatctacatacaactcaac 42960373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 415
Target Start/End: Original strand, 19236294 - 19236374
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | |||||| ||||||||||| |||||||| |||||||||||| | ||||||| || |||||    
T  19236294 ctcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgct 19236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22336278 - 22336318
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22336278 atgcaactgactccacttgtgtatatctacatacaactcaa 22336318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22339816 - 22339856
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22339816 atgcaactgactccacttgtgtatatctacatacaactcaa 22339856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 22439369 - 22439310
Alignment:
Q  364 cttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaa 423  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||||    
T  22439369 cttaagcgaccggcttacagtaagtctgggttctgctcgcttaaggttcacttaagcgaa 22439310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 396
Target Start/End: Original strand, 22460506 - 22460611
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  22460506 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 22460603  T
Q  389 ctgggttc 396  Q
    ||||||||    
T  22460604 ctgggttc 22460611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6404502 - 6404428
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    ||||||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  6404502 atgcaactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 6404428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 10035296 - 10035354
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  10035296 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 10035354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18409006 - 18408968
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18409006 atgcaactgactccacttgtgtatatctacatacaactc 18408968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 18819087 - 18819145
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  18819087 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 18819145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24668997 - 24668959
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24668997 atgcaactgactccacttgtgtatatctacatacaactc 24668959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24738766 - 24738728
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24738766 atgcaactgactccacttgtgtatatctacatacaactc 24738728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24751535 - 24751497
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24751535 atgcaactgactccacttgtgtatatctacatacaactc 24751497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 427395 - 427432
Alignment:
Q  5 aactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  427395 aactgactccacttgtgtatatctacatacaactcaac 427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19236018 - 19236059
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  19236018 atgcaactgactccacttgtgtatatctgcatacaactcaac 19236059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20772088 - 20772129
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  20772088 atgcgactgactccacttgtgtatatctacatacaactcaac 20772129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20843317 - 20843358
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  20843317 atgcaattgactccacttgtgtatatctacatacaactcaac 20843358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21829675 - 21829712
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21829675 atgcaactgactccacttgtgtatatctacatacaact 21829712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 21869547 - 21869490
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactta 66  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | ||||||||||    
T  21869547 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgactta 21869490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 21873827 - 21873770
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactta 66  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | ||||||||||    
T  21873827 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgactta 21873770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22749925 - 22749966
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  22749925 atgcaactgactccacttgtggatatctacatacaactcaac 22749966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28371350 - 28371309
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  28371350 atgcaactgactccacctgtgtatatctacatacaactcaac 28371309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38145679 - 38145642
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38145679 atgcaactgactccacttgtgtatatctacatacaact 38145642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 397
Target Start/End: Original strand, 34829432 - 34829539
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||||||||||||||  |||| ||| ||| ||||||||||||| |||||||||||||  | ||| || ||||||||||| ||| ||| |||||    
T  34829432 gtcccctagtgcacgaagcaaag-ttcagaaaaaggttgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 34829530  T
Q  389 ctgggttct 397  Q
      |||||||    
T  34829531 tggggttct 34829539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6728266 - 6728228
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  6728266 atgcaactaactccacttgtgtatatctacatacaactc 6728228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20819301 - 20819339
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  20819301 atgcaactgactccacttgtgtatatctgcatacaactc 20819339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20826401 - 20826439
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  20826401 atgcaactgactccacttgtgtatatctgcatacaactc 20826439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 21901858 - 21901800
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||| ||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  21901858 gacttcacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 21901800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22232641 - 22232568
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatat-atttcatatgacttactactccg 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |  |||||  ||||||||||||||| ||||||    
T  22232641 atgcaactgac-ccacttgtgtatatctacatacaacttaacaatgcatatgttttcatatgacttacgactccg 22232568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 415
Target Start/End: Original strand, 22467130 - 22467254
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| | |||||||||||| | |||||| ||||| ||||| |||||||| ||||    
T  22467130 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagtacgcttaagcgacggctagttcgcttaaccgaccagcttacagtaggt 22467227  T
Q  389 ctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | ||||||| || |||||    
T  22467228 ctgggttcagttcgcttatgggtcgct 22467254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 22749996 - 22750030
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  22749996 tgactccacttgtgtatatctacatacaactcaac 22750030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28897037 - 28896999
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28897037 atgcaactgactccacttatgtatatctacatacaactc 28896999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28910285 - 28910247
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28910285 atgcaactgactccacttatgtatatctacatacaactc 28910247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28931977 - 28931939
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28931977 atgcaactgactccacttatgtatatctacatacaactc 28931939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28933480 - 28933442
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28933480 atgcaactgactccacttatgtatatctacatacaactc 28933442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28946680 - 28946642
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28946680 atgcaactgactccacttatgtatatctacatacaactc 28946642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 21624710 - 21624743
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  21624710 gactccacttgtgtatatctacatacaactcaac 21624743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22007928 - 22007888
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  22007928 atgcaactgac-ccacttgtgtatatctacatacaactcaac 22007888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22460273 - 22460314
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  22460273 atgcaactgactccacttgtgtatatatgcatacaactcaac 22460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23561614 - 23561577
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||| |||||||||||||||||||||||||||||||    
T  23561614 atgcaattgactccacttgtgtatatctacatacaact 23561577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24930866 - 24930825
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  24930866 atgcaactgactcctctagtgtatatctacatacaactcaac 24930825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 28371423 - 28371390
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  28371423 gactccacttgtgtatatctacatacaactcaac 28371390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37805324 - 37805280
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  37805324 atgcaactgac-ccacctgtgtatatctacatacaactcaactaca 37805280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 38145752 - 38145719
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  38145752 gactccacttgtgtatatctacatacaactcaac 38145719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 42960259 - 42960292
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  42960259 gactccacttgtgtatatctacatacaactcaac 42960292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 15194027 - 15193995
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaa 41  Q
    |||||||||||||||||||||||||||||||||    
T  15194027 gactccacttgtgtatatctacatacaactcaa 15193995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 17022856 - 17022824
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  17022856 actccacttgtgtatatctacatacaactcaac 17022824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 23538979 - 23539035
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||| | |||||||||    
T  23538979 gactccacttgtgtatatatacatacaactcaacaatgcatatatatgatatgactt 23539035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 20781102 - 20781192
Alignment:
Q  297 gtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||||||||||| |||| ||| |||||||||||  || | |||||||||||||| | ||| || ||||||||||| ||| ||| |||||    
T  20781102 gtgcacgaagcaaaa-ttcagaaaaaggctgactaacacttagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggt 20781192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 23112546 - 23112480
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaa 192  Q
    |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||  |||||||||||    
T  23112546 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattcactaa 23112480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 23112733 - 23112702
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  23112733 ccacttgtgtatatctacatacaactcaacta 23112702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 459
Target Start/End: Original strand, 20819639 - 20819689
Alignment:
Q  409 gttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    ||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  20819639 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20819689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 459
Target Start/End: Original strand, 20826739 - 20826789
Alignment:
Q  409 gttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacagg 459  Q
    ||||||||||||||| ||   |||||||||||| |||||||||||||||||    
T  20826739 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20826789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 25013736 - 25013794
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||| | | |||||||||    
T  25013736 gactccacttgtgtatatctacatacaacttaacaatgcatatatataaaatgacttac 25013794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28890333 - 28890295
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  28890333 atgcaactgactccacttatttatatctacatacaactc 28890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 758259 - 758219
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  758259 atgcaactgac-ccacttgtgtatatctacatacaacccaac 758219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20937764 - 20937804
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  20937764 atgcaactgac-ccacttgtgtatatctacatacaacccaac 20937804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 21495077 - 21495110
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  21495077 gactcaacttgtgtatatctacatacaactcaac 21495110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 21888731 - 21888764
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||| |||||||||||||||||||    
T  21888731 gactccacttgtgtctatctacatacaactcaac 21888764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22312836 - 22312796
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  22312836 atgcaactgac-ccacttgtgtatatctacatacaacccaac 22312796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22509177 - 22509137
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  22509177 atgcaactgac-ccacttgtgtatatctacatacaacccaac 22509137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34829200 - 34829236
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34829200 atgcaactgac-ccacttgtgtatatctacatacaact 34829236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 10816952 - 10817008
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| | ||||||||||||| |  ||||||| | |||||||||    
T  10816952 gactccacttgtgtatatattcatacaactcaacaatgcatatatatgatatgactt 10817008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 20819456 - 20819488
Alignment:
Q  238 cctatacaagggttatacaagttaaaggaaaca 270  Q
    ||||||||||||||||||||| |||||||||||    
T  20819456 cctatacaagggttatacaagctaaaggaaaca 20819488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 20826556 - 20826588
Alignment:
Q  238 cctatacaagggttatacaagttaaaggaaaca 270  Q
    ||||||||||||||||||||| |||||||||||    
T  20826556 cctatacaagggttatacaagctaaaggaaaca 20826588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 28890058 - 28889978
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||  || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  28890058 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 28889978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 28896762 - 28896682
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||  || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  28896762 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 28896682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 28910010 - 28909930
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||  || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  28910010 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 28909930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 28931702 - 28931622
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||  || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  28931702 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 28931622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 28946405 - 28946325
Alignment:
Q  335 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||| |||||||||||||| | ||  || |||||||||||  ||||||| |||||||||||| | ||||||| || |||||    
T  28946405 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgct 28946325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 29325540 - 29325504
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  29325540 gactcgacttgtgtatatcaacatacaactcaactac 29325504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 43121001 - 43121037
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  43121001 gactccacttgtgtatatcagcatacaactcaactac 43121037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 43124534 - 43124570
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||||||||||||||  ||||||||||||||||    
T  43124534 gactccacttgtgtatatcagcatacaactcaactac 43124570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 66; Significance: 5e-29; HSPs: 4)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 752 - 581
Alignment:
Q  290 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||| | |||||| |||||||||||||||||||||| ||    
T  752 tcccctagtgcacgacgcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagaaagt 655  T
Q  389 ctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacaggttc 462  Q
      |||||  ||||||| | ||||||||||||||||||||| ||||||| |||  | ||||||||| || |||||    
T  654 tggggtttcgctcgctgacggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 7688 - 7605
Alignment:
Q  290 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||| | |||||| |||||||||||    
T  7688 tcccctagtgcacgacgcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgacc 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1062 - 1024
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  1062 atgcaaccgactccacttgtgtatatctacataccactc 1024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7998 - 7960
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  7998 atgcaaccgactccacttgtgtatatctacataccactc 7960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 463
Target Start/End: Complemental strand, 15856 - 15521
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||| ||||||||||||||||||| ||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  15856 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaaagtgtttcag 15758  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    || ||||| | | | |||| || ||||||||||||| || ||||||||||  ||||||||| | | || ||| |||||||| || ||| ||| ||||| |    
T  15757 tatgattcag-tgcatatataaaggttatacaagttgaaagaaacatttttaaatgctcaaaaggatctcctagtgcacgaggc-aaagttc-aaaagtg 15661  T
Q  324 gctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcga 422  Q
    ||||||||||| ||| ||||||||||||||| | | |||| |||||||||||| |||| |||  || ||||||  | ||||| | |||||||||||||||    
T  15660 gctgactaagg-tcatcttcgcttaagcgacggttggttcgcttaagcgaccgtcttatagagagtttgggtttcgttcgctaacggttcgcttgagcga 15562  T
Q  423 acttctaacagaatcaaaacggtttttcgctcacaggttct 463  Q
    |||||| ||| |||  ||| | ||||||||| || ||||||    
T  15561 acttctgacataatggaaatgatttttcgcttacgggttct 15521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16004 - 15966
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16004 atgcaactgactccacttttgtatatctacatacaactc 15966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 3e-27; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 323 - 456
Target Start/End: Complemental strand, 15121 - 14977
Alignment:
Q  323 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctt-----------agggtt 411  Q
    ||||||||||||  ||||||||||||||||| | |||||| |||||||||||||||||||| | |||||||||| ||||||||           | ||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcagctcgcttacggttcgctcacggtt 15022  T
Q  412 cgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  15021 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 76890 - 76931
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  76890 atgcaactgactccacttgtgtatatctacatacaactcaac 76931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 71259 - 71299
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  71259 atgcaactgacac-acttgtgtatatctacatacaactcaac 71299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 15450 - 15422
Alignment:
Q  16 cttgtgtatatctacatacaactcaacta 44  Q
    |||||||||||||||||||||||||||||    
T  15450 cttgtgtatatctacatacaactcaacta 15422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 384
Target Start/End: Original strand, 1117 - 1261
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | |||||| ||||||||||||||| ||||||||| ||||||||||| | |     
T  1117 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 1215  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    ||||||||||||||| | | | || ||||||||||||||| |||||    
T  1216 cttcgcttaagcgacggctggctcgcttaagcgaccggctcacaga 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 885 - 918
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||| |||||||||||||    
T  885 gactccacttgtgtatatctgcatacaactcaac 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 18712098 - 18712270
Alignment:
Q  290 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    |||||| |||||||| |||||| ||||||| | |||||||||||| ||| ||||||||||||||| | |||||| ||||||||||| |||||||||| ||    
T  18712098 tcccctagtgcacgaggcaaaagttcaaaaggtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccagcttacagaaagt 18712196  T
Q  389 ctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacaggttc 462  Q
      |||||| ||||||| | ||| ||||| ||||||||||| ||||||| |||  | ||||||||| || |||||    
T  18712197 tggggttccgctcgctaacggtacgcttaagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 18712270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 415
Target Start/End: Original strand, 41111214 - 41111354
Alignment:
Q  275 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  41111214 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 41111312  T
Q  375 ggcttacagaagg-tctgggttctgctcgcttagggttcgct 415  Q
     |||||||| ||| ||||||||| | ||||||| || |||||    
T  41111313 agcttacagtaggttctgggttcagttcgcttacgggtcgct 41111354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 41110995 - 41111112
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattat 111  Q
    |||| |||||||||||||||||||||| || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||    
T  41110995 ccacctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttat 41111092  T
Q  112 aattatgcacatacatcaat 131  Q
    ||||||||||||||||||||    
T  41111093 aattatgcacatacatcaat 41111112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 20941714 - 20941657
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 140  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20941714 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 20941657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 415
Target Start/End: Original strand, 21710167 - 21710292
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||| ||||||||| | |||  ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  21710167 gtcccctagtgtacgaagcaaga-ttcggaaaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21710265  T
Q  389 ctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | ||||||| ||||||||    
T  21710266 ctgggttcagttcgcttatggttcgct 21710292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 374
Target Start/End: Original strand, 19961472 - 19961622
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||| ||||||||||||||||||||| |||| ||||||  | | ||| ||||| | | |||||| ||||||||||||||  |||| | ||    
T  19961472 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacgtaaaaatactcaaaagggtcccctagtgcacgaagcaaag-ttcagatag 19961569  T
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||||||||||||||||  ||||||||||||  | ||| || |||||||||||    
T  19961570 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgacc 19961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 411
Target Start/End: Complemental strand, 22030504 - 22030333
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||||||||| || |||||||| |||||||||||| | | |  ||| ||||| |||||||||||| |||||| ||||||||||| |       
T  22030504 tatacaaaggttatacaagttgaaagaaacattatagaatgctcaaaaggatttcctagtgcaagaagcaaaaatt-aaaaagtggctgactaagacctt 22030406  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggtt 411  Q
    ||||||||||||||  | | | || |||||||||| ||||||||||  ||  | |||||||||||| ||||||    
T  22030405 cttcgcttaagcgaaggctggctcgcttaagcgactggcttacagagagttggtgttctgctcgctaagggtt 22030333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 415
Target Start/End: Complemental strand, 20851838 - 20851714
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  20851838 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 20851741  T
Q  389 ctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | ||||||| || |||||    
T  20851740 ctgggttcagttcgcttatgggtcgct 20851714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 415
Target Start/End: Original strand, 21705625 - 21705749
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  21705625 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21705722  T
Q  389 ctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | ||||||| || |||||    
T  21705723 ctgggttcagttcgcttacgggtcgct 21705749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13226881 - 13226922
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13226881 atgcaactgactccacttgtgtatatctacatacaactcaac 13226922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15316511 - 15316470
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15316511 atgcaactgactccacttgtgtatatctacatacaactcaac 15316470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16371708 - 16371749
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16371708 atgcaactgactccacttgtgtatatctacatacaactcaac 16371749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16371789 - 16371830
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16371789 atgcaactgactccacttgtgtatatctacatacaactcaac 16371830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 20858434 - 20858341
Alignment:
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| |||||||||||| | ||||||| || |||||    
T  20858434 aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgct 20858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11157180 - 11157218
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11157180 atgcaactgactccacttgtgtatatctacatacaactc 11157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 353
Target Start/End: Original strand, 11157328 - 11157554
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||| ||||||||||||||||||  ||| ||||||||  || || |||||||| ||||   ||||  ||    
T  11157328 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatcttcaaa-ttcactaaactcgactaattcgattaccaaagtgtttcag 11157426  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    |||||||  | |   |||| |||||||||||||||| || ||||||||||  ||||||||| | | ||||||  ||||||| || ||| ||||||||| |    
T  11157427 taggatttag-tgtatatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggc-aaagttcaaaaagtg 11157524  T
Q  324 gctgactaaggctca-cttcgcttaagcgac 353  Q
    | ||||||||| ||| |||||||||||||||    
T  11157525 gttgactaagg-tcatcttcgcttaagcgac 11157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16883547 - 16883473
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    ||||||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  16883547 atgcaactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 16883473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21410681 - 21410607
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||||||| ||| |  ||||||| |  ||||||||||| ||||||    
T  21410681 atgcaactgactccacttgtgtatatctacatacaacttaacaatgcatatatgtatatatgacttacaactccg 21410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29554452 - 29554414
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29554452 atgcaactgactccacttgtgtatatctacatacaactc 29554414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32650271 - 32650309
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32650271 atgcaactgactccacttgtgtatatctacatacaactc 32650309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19666738 - 19666701
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19666738 atgcaactgactccacttgtgtatatctacatacaact 19666701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20849199 - 20849236
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20849199 atgcaactgactccacttgtgtatatctacatacaact 20849236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20852071 - 20852030
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20852071 atgcaactgactccacttgtgtatatctgcatacaactcaac 20852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20858697 - 20858656
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20858697 atgcaactgactccacttgtgtatatctgcatacaactcaac 20858656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21664333 - 21664370
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21664333 atgcaactgactccacttgtgtatatctacatacaact 21664370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21705393 - 21705434
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  21705393 atgcaactgactccacttgtgtatatctgcatacaactcaac 21705434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21732646 - 21732683
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21732646 atgcaactgactccacttgtgtatatctacatacaact 21732683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 23631136 - 23631200
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactcc 73  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||| | ||||||||||| |||||    
T  23631136 gactccacttgtgtatatctacatacaacttaacaatgcatatatataatatgacttacaactcc 23631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19778467 - 19778400
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttac 67  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| ||||||||||||||    
T  19778467 atgcaactaactccacttgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttac 19778400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20941862 - 20941789
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatat-atttcatatgacttactactccg 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |  |||||  ||||||||||||||| ||||||    
T  20941862 atgcaactgac-ccacttgtgtatatctacatacaacttaacaatgcatatgttttcatatgacttacaactccg 20941789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 32650338 - 32650372
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  32650338 tgactccacttgtgtatatctacatacaactcaac 32650372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19853204 - 19853241
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19853204 atgcaactgactccaattgtgtatatctacatacaact 19853241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19859339 - 19859376
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19859339 atgcaactgactccaattgtgtatatctacatacaact 19859376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 20108529 - 20108496
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  20108529 gactccacttgtgtatatctacatacaactcaac 20108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23195480 - 23195443
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23195480 atgcaactgactccacatgtgtatatctacatacaact 23195443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 20438327 - 20438224
Alignment:
Q  88 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 187  Q
    ||||||| ||||||||||||| ||||| |  |  || ||| || ||||||||| | | ||||| |||||||| |||||||||||||||||||  ||||||    
T  20438327 tccagaaaatacacaattaatcataatcaaactaatgcataaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattc 20438229  T
Q  188 actaa 192  Q
    |||||    
T  20438228 actaa 20438224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 19664126 - 19664095
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||||||||||||||||||||||||    
T  19664126 ccacttgtgtatatctacatacaactcaacta 19664095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 21698276 - 21698335
Alignment:
Q  9 gactccacttgtgtatatctacatacaact-caactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||| |||| |  ||||||| | |||||||||||    
T  21698276 gactccacttgtgtatatctacatacaactccaacaatgcatatatataatatgacttac 21698335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 20086479 - 20086449
Alignment:
Q  9 gactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||    
T  20086479 gactccacttgtgtatatctacatacaactc 20086449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 7792802 - 7792769
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  7792802 gactcaacttgtgtatatctacatacaactcaac 7792769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19961306 - 19961342
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19961306 atgcaactgac-ccacttgtgtatatctacatacaact 19961342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 20242714 - 20242743
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  20242714 ccacttgtgtatatctacatacaactcaac 20242743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21709934 - 21709975
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||  ||| ||||||||    
T  21709934 atgcaactgactccacttgtgtatatctttatataactcaac 21709975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 22030733 - 22030704
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  22030733 gactccacttgtgtatatctacatacaact 22030704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23066708 - 23066668
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  23066708 atgcaactgac-ccacttgtgtatatctacatacaacccaac 23066668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 30491436 - 30491407
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  30491436 gactccacttgtgtatatctacatacaact 30491407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 457
Target Start/End: Original strand, 41111358 - 41111407
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcaca 457  Q
    |||||||||||||||||||   ||||||| |||| |||||||||||||||    
T  41111358 ggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 41111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 20579291 - 20579327
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  20579291 gactcgacttgtgtatatcaacatacaactcaactac 20579327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 20586984 - 20587020
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  20586984 gactcgacttgtgtatatcaacatacaactcaactac 20587020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 24475494 - 24475526
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||| ||||||||||||||    
T  24475494 actccacttgtgtatatcaacatacaactcaac 24475526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 1460 - 1813
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatatttc-atatgacttactactccgaaaattctaacaa--tccaga-aca 96  Q
    |||||| ||||||||||||||||||||||| |||||||| || |  ||||||| |  ||||||||||| ||||| | ||||| |||||  |||||| | |    
T  1460 atgcaattgactccacttgtgtatatctacgtacaactcgacaatgcatatatgtatatatgacttacaactcc-ataattc-aacaacgtccagacaaa 1557  T
Q  97 tacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatc 196  Q
    | |||||||||| | ||| || |  || |||||  |||||||||   | |||||||||||||| ||||||||||| | || || ||||||||||||  ||    
T  1558 tgcacaattaataacaatcatactaatgcatcaggttcattcaacctagtatatattcacttggtttcatactcactgatatccaaaattcactaaattc 1657  T
Q  197 aaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccct 295  Q
    |||||| ||||| ||||   ||||| |||||||||| |     |||| || ||| ||||||||| || ||||||||||| ||||||||| | | ||||||    
T  1658 aaccaactcgattaccaatgtgttc-agtaggattcaggggtatatataaaggtcatacaagttgaaagaaacattttaaaatgctcaaaaggatcccct 1756  T
Q  296 cgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgac 353  Q
     |||||||| || ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  1757 agtgcacgaggc-aaaattcaaaaagtggctgactaagg-tcatcttcgcttaagcgac 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 59; Significance: 8e-25; HSPs: 6)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 462
Target Start/End: Complemental strand, 35010 - 34861
Alignment:
Q  313 ttcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggtt 411  Q
    ||||||||| |||||||||||| ||| ||||||||||||||  | |||||| |||||||||||||||||||||| ||   ||||| ||||||| | ||||    
T  35010 ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttgaggttccgctcgctgacggtt 34912  T
Q  412 cgcttgagcgaacttctaacagaatcaaaacggtttttcgctcacaggttc 462  Q
    ||||||||||||||||| ||||||| |||  | ||||||||| || |||||    
T  34911 cgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 34861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45068 - 45105
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45068 atgcaactgactccacttgtgtatatctacatacaact 45105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36825 - 36783
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  36825 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 36783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9398 - 9435
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  9398 atgcaactgaatccacttgtgtatatctacatacaact 9435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 36758 - 36724
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||| |||||||||||||||    
T  36758 tgactccacttgtgtatatttacatacaactcaac 36724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44000 - 43962
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  44000 atgcaaccgactccacttgtgtatatctacataccactc 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 449
Target Start/End: Complemental strand, 15633 - 15475
Alignment:
Q  290 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||  | ||| ||||||||||||| |||| |||||| ||    
T  15633 tcccctagtgcacgaggcaaat-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagctcacttaagcgactggctcacagaaagt 15536  T
Q  389 ctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatcaaaacggttttt 449  Q
      |||||| ||||||| | |||||||||||||||||||||  |||||| |||| |||||||    
T  15535 tggggttccgctcgctgacggttcgcttgagcgaacttctggcagaatgaaaatggttttt 15475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 23328 - 23192
Alignment:
Q  313 ttcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggtt 411  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| | ||| || |||| || ||||||| |||||| ||  ||||||  |||||| | ||||    
T  23328 ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaggcaaccggctcacagaaagttggggttcaactcgctgacggtt 23230  T
Q  412 cgcttgagcgaacttctaacagaatcaaaacggttttt 449  Q
    |||||||||||||||||  |||||| |||| |||||||    
T  23229 cgcttgagcgaacttctggcagaatgaaaatggttttt 23192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 125 - 384
Target Start/End: Original strand, 542 - 799
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||| | | ||||||||||||||  ||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  542 catcaagttcattcaacatagtatatgttcacttggtatgatactcaatcatcttcaaa-ttcactaaactcaactaattcgattaccaaagtgtttcag 640  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    |||||||| | | | |||| || |||||||||| || || ||||||||||  ||||||||| | | ||||||  ||||||| |||||  ||||||||| |    
T  641 taggattcag-tgcatatataaaggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaag-ttcaaaaagtg 738  T
Q  324 gctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
    ||||||||||| ||| ||||||||||||||| | | |||| |||||||||||||||||||||    
T  739 gctgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacaga 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 397 - 434
Alignment:
Q  5 aactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  397 aactgacttcacttgcgtatatctacatacaactcaac 434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 339 - 456
Target Start/End: Original strand, 6907 - 7024
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| | |||||||||||||||||||| | ||||||||||| || | ||  ||||||||    
T  6907 cttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacgattcgcttgagcaaattcctggcagaatca 7006  T
Q  439 aaacggtttttcgctcac 456  Q
    ||| ||||  ||||||||    
T  7007 aaaaggttcctcgctcac 7024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 453
Target Start/End: Complemental strand, 4281 - 4153
Alignment:
Q  325 ctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaac 424  Q
    ||||||||||   ||||||||||||||||   |||||| ||||||||| | |||||||| | |||||||||||||||| ||| |||||||||||||||||    
T  4281 ctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgatcagcttacagtaagtctgggttctgctcgattacggttcgcttgagcgaac 4182  T
Q  425 ttctaacagaatcaaaacggtttttcgct 453  Q
    |  |  ||||||||||  |||||||||||    
T  4181 tcttggcagaatcaaattggtttttcgct 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 18024 - 17972
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttca 135  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18024 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 17972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 23657 - 23605
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttca 135  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23657 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 23605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 3e-21; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 174551 - 174440
Alignment:
Q  20 tgtatatctacatacaactcaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataattatg 118  Q
    ||||| ||||||||||| || ||||  |||||| ||||| |||||||||| ||||| || | | |||||||||||||||||||||||| |||||||||||    
T  174551 tgtatctctacatacaattcgactattacatatttttcaaatgacttactgctccgcaact-caaacaatccagaacatacacaattatttataattatg 174453  T
Q  119 cacatacatcaat 131  Q
    |||||||||||||    
T  174452 cacatacatcaat 174440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 223 - 374
Target Start/End: Complemental strand, 493800 - 493650
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||| |||||||||| |||||||||| |||| ||||||||| | ||| ||||| | | |||||| |||||||||||||   |||| |||     
T  493800 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaagg-ttcagaaaa 493703  T
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    ||||||||||||||||| |||||||||||||  | ||| || |||||||||||    
T  493702 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgacc 493650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 96018 - 96055
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  96018 atgcaactgactccacttgtgtatatctacatacaact 96055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 493957 - 493924
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  493957 gactccacttgtgtatatctacatacaactcaac 493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 384
Target Start/End: Original strand, 525062 - 525205
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctc 337  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||| ||| |  | |||| ||||| ||| |||||  |||||| | ||||||| |||||      
T  525062 tatacaaaggttatacaagttgaaagaaacatttcagaatgctc-agatggattccctagtgcaggaaacaaaa--tcaaaatgtggctgaccaaggcct 525158  T
Q  338 acttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 384  Q
     ||||||||||||||  | | |||| |||||||||||| ||||||||    
T  525159 tcttcgcttaagcgaaggctggttcgcttaagcgaccgtcttacaga 525205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 488379 - 488350
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  488379 gactccacttgtgtatatctacatacaact 488350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 417
Target Start/End: Original strand, 16083 - 16247
Alignment:
Q  253 tacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagc 350  Q
    |||||||| || | ||||||| | ||||||||| | | |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||    
T  16083 tacaagttgaaaggaacatttaaaaatgctcaaaaggatcccctagtgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagc 16180  T
Q  351 gacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttg 417  Q
    ||| | ||| || |||||||||||||||||||||| ||  |||||| ||||||| | ||||||||||    
T  16181 gacggttagctcgcttaagcgaccggcttacagaaagttggggttccgctcgctaacggttcgcttg 16247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 289 - 415
Target Start/End: Complemental strand, 4377 - 4253
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| ||||||||||||| | |||| ||| ||||||||||| ||||| |||||||||||||  | |||||| ||||||||||| |||||||| ||||    
T  4377 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgatggctagttcgcttaagcgaccagcttacagtaggt 4280  T
Q  389 ctgggttctgctcgcttagggttcgct 415  Q
    |||||||| | ||||||| || |||||    
T  4279 ctgggttcagttcgcttacgggtcgct 4253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4609 - 4568
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  4609 atgcaactgactccacttgtgtatatcttcatacaactcaac 4568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 425
Target Start/End: Complemental strand, 102787 - 102489
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 224  Q
    |||||| ||||||||| | | ||||| |||||||| ||||||||||||||||||| ||| || |||||  ||||| |||||||| ||||   ||||   |    
T  102787 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctccaaattt-actaaactcaactaattcgattaccaaggtgtttctg 102689  T
Q  225 taggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagag 323  Q
    ||||| || | |   |||| || ||||||||| ||| || ||||| ||||| ||| ||||| | | |||||| |||||||| ||||   ||||||||| |    
T  102688 taggactcag-tgtgtatataaaggttatacaggttgaaagaaaccttttaaaatactcaaaaggatcccctagtgcacgaggcaagg-ttcaaaaagtg 102591  T
Q  324 gctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcga 422  Q
    || |||||||| ||| ||||||||||||||  | | |||| |||||||||||| ||||||||| ||  |||||| ||||||| | |||||||||||||||    
T  102590 gccgactaagg-tcatcttcgcttaagcgatggctggttcgcttaagcgaccgacttacagaaagttggggttccgctcgctgacggttcgcttgagcga 102492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 1584 - 1527
Alignment:
Q  83 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 140  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  1584 aacaatccagaacatacacaattaattaaaattatgctcatacatcaatttcattcaa 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8475 - 8516
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8475 atgcaactgactccacttgtgtatatctacatacaactcaac 8516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1732 - 1659
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatat-atttcatatgacttactactccg 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |  |||||  ||||||||||||||| ||||||    
T  1732 atgcaactgac-ccacttgtgtatatctacatacaacttaacaatgcatatgttttcatatgacttacaactccg 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 3102 - 3163
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactcc 73  Q
    |||||||||||||||||||||||||||||| | ||||||||   |||||||||||| |||||    
T  3102 ccacttgtgtatatctacatacaactcaaccatacatatatgcacatatgacttacaactcc 3163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 313 - 417
Target Start/End: Complemental strand, 3975 - 3871
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttc 412  Q
    ||||||||| ||||||||||||   ||||||||||||||||   |||||| ||||||||||||||||||||   |||||||||||||||  ||| |||||    
T  3975 ttcaaaaagtggctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtgagtctgggttctgctcaattacggttc 3876  T
Q  413 gcttg 417  Q
    |||||    
T  3875 gcttg 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 4297 - 4265
Alignment:
Q  12 tccacttgtgtatatctacatacaactcaacta 44  Q
    |||||||||||||||||||||||||||||||||    
T  4297 tccacttgtgtatatctacatacaactcaacta 4265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 266 - 417
Target Start/End: Original strand, 17492 - 17643
Alignment:
Q  266 aaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcac 364  Q
    |||| ||||||||||||||| | | || ||| ||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||||||  | | | || |    
T  17492 aaaccttttagaatgctcaaaaggctcgcctagtgcacgaaacaaaa-ttcagaaagtggctgaccaaggctcacttcgcttaagcgaaggctggctcgc 17590  T
Q  365 ttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttg 417  Q
    ||||||||||||||||||||| || ||||||  ||||||| |  |||||||||    
T  17591 ttaagcgaccggcttacagaaagtttgggtttcgctcgctcacagttcgcttg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 24342 - 24178
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||| |||| |||||||||||||||| |||| |||||| || | ||  ||||| | | |||||| ||||||||||||||  |||| ||||    
T  24342 agtaggatt-tgatgcctacacaagggttatacaagctaaaagaaacacttaaaaacactcaaaagggtcccctagtgcacgaagcaaag-ttcagaaag 24245  T
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    || ||||||||||||||  ||||||||||||  ||||| || ||||||||||| ||| ||| |||||    
T  24244 agactgactaaggctcatctcgcttaagcgaaggatagctcgcttaagcgaccagctcacaaaaggt 24178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 10655 - 10622
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  10655 gactccacttgtgtatatctacatacaactcaac 10622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 18834 - 18801
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  18834 gactccacttgtgtatatctacatacaactcaac 18801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24508 - 24472
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  24508 atgcaactgac-ccacttgtgtatatctacatacaact 24472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 409
Target Start/End: Original strand, 121200 - 121369
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | | |||| ||||||||||| |||| |||||||| ||||||||||| |       
T  121200 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagc-aaaagtcaaaaagtggctgactaagacctt 121298  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttaggg 409  Q
    ||||||||||||||  | | | || ||||||| |||||||||||||  ||  | |||||||||||| ||||    
T  121299 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggg 121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 409
Target Start/End: Original strand, 132077 - 132246
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | | |||| ||||||||||| |||| |||||||| ||||||||||| |       
T  132077 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagc-aaaagtcaaaaagtggctgactaagacctt 132175  T
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttaggg 409  Q
    ||||||||||||||  | | | || ||||||| |||||||||||||  ||  | |||||||||||| ||||    
T  132176 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggg 132246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 347
Target Start/End: Complemental strand, 19166 - 19059
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 338  Q
    ||||||| ||||||| ||||| || ||||||||||| ||||||||| | | |||||| ||||||||||| ||||||||||||| ||||||||||| | |     
T  19166 tatacaaaggttatataagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagc-aaaattcaaaaagtggctgactaagaccct 19068  T
Q  339 cttcgctta 347  Q
    |||||||||    
T  19067 cttcgctta 19059  T

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Target: scaffold0106 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46765 - 46685
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccgaaaatt 80  Q
    ||||||||||||||||||||||||||||||||||||||  || |  ||||||| |||||||||||||| |||||| |||||    
T  46765 atgcaactgactccacttgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttacaactccgcaaatt 46685  T

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Target: scaffold0106; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51038 - 50958
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccgaaaatt 80  Q
    ||||||||||||||||||||||||||||||||||||||  || |  ||||||| |||||||||||||| |||||| |||||    
T  51038 atgcaactgactccacttgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttacaactccgcaaatt 50958  T

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Target: scaffold0106; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28770 - 28811
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  28770 atgcaattgactccacttgtgtatatctacatacaactcaac 28811  T

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Target: scaffold0106; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 36364 - 36397
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||    
T  36364 gactccacttgtgtatatctacatacaactcaac 36397  T

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Target: scaffold0034 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 406
Target Start/End: Original strand, 72565 - 72747
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||||| ||||||||||||||| ||| |||| | |||| ||||  || || || | | ||||||  ||||||||||||||||||| ||||    
T  72565 agtaggatt-tgatacttatacaagggttatataagctaaaaggaacactttaagatactaaaaagggtcccctaatgcacgaagcaaaaattcagaaag 72663  T
Q  322 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgctta 406  Q
     |||||||| |||||||  ||||||||||||  | ||| || ||||||||||| ||| ||| |||||  ||||| ||||||||||    
T  72664 tggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggttggggttttgctcgctta 72747  T

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Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 437 - 400
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  437 atgcaactgaccccacttgtgtatatctacatacaact 400  T

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Target: scaffold0034; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6596 - 6559
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  6596 atgcaactgaccccacttgtgtatatctacatacaact 6559  T

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Target: scaffold0034; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10112 - 10072
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  10112 atgcaactgac-ccacttgtgtatatctacatacaactcaac 10072  T

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Target: scaffold0034; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 17397 - 17368
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  17397 ccacttgtgtatatctacatacaactcaac 17368  T

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Target: scaffold0107 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 462
Target Start/End: Complemental strand, 41236 - 41113
Alignment:
Q  339 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgcttgagcgaacttctaacagaatca 438  Q
    |||||||||||||||   |||||| ||||||||| ||||| |||||||||  |||||| ||||||| |  ||||||||||||||||||| | ||||||      
T  41236 cttcgcttaagcgacgtctagttcgcttaagcgatcggctcacagaaggttggggttccgctcgctgacagttcgcttgagcgaacttcaagcagaatgt 41137  T
Q  439 aaacggtttttcgctcacaggttc 462  Q
    ||| ||||||| ||| || |||||    
T  41136 aaatggttttttgcttacgggttc 41113  T

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Target: scaffold0107; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41624 - 41582
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  41624 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 41582  T

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Target: scaffold1469 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 473 - 514
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  473 atgcaactgactccacttgtgtatatctacatacaactcaac 514  T

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Target: scaffold0751 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 574 - 615
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  574 atgcaactgactccacttgtgtatatctacatacaactcaac 615  T

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Target: scaffold0720 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4199 - 4158
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4199 atgcaactgactccacttgtgtatatctacatacaactcaac 4158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 424
Target Start/End: Complemental strand, 3966 - 3831
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 388  Q
    ||||||| |||||||||||||   |||||||| ||||||||||| ||||| |||||||||||||  | ||| || ||||||||||| ||| ||| || ||    
T  3966 gtcccctagtgcacgaagcaagg-ttcaaaaaaaggctgactaatgctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaagt 3868  T
Q  389 ctgggttct-gctcgcttagggttcgcttgagcgaac 424  Q
       ||| || ||||||| | |||||||||||||||||    
T  3867 tgaggtcctcgctcgctcacggttcgcttgagcgaac 3831  T

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Target: scaffold0556 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5013 - 4972
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5013 atgcaactgactccacttgtgtatatctacatacaactcaac 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2774 - 2733
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2774 atgcaactgactccacttgtgtatatctacatacaactcaac 2733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2855 - 2814
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  2855 atgcaactgactccacttgtgtatatctgcatacaactcaac 2814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25757 - 25798
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25757 atgcaactgactccacttgtgtatatctacatacaactcaac 25798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5132 - 5091
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5132 atgcaactgactccacttgtgtatatctacatacaactcaac 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 5061 - 5027
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  5061 tgactccacttgtgtatatctacatacaactcaac 5027  T

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Target: scaffold0089 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2115 - 2156
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2115 atgcaactgactccacttgtgtatatctacatacaactcaac 2156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3335 - 3297
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3335 atgcaactgactccacttgtgtatatctacatacaactc 3297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16899 - 16861
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16899 atgcaactgactccacttgtgtatatctacatacaactc 16861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8647 - 8685
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8647 atgcaactgactccacttgtgtatatctacatacaactc 8685  T

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Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 45682 - 45740
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  45682 gactccacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 45740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 51552 - 51657
Alignment:
Q  248 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgctt 346  Q
    ||||||||||||| || ||||||||||| ||||||||| | | | |||| |||||| |||| ||||||||||||| ||||||||||| |   ||||||||    
T  51552 ggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacaaagc-aaaattcaaaaagtggctgactaagaccttcttcgctt 51650  T
Q  347 aagcgac 353  Q
    |||||||    
T  51651 aagcgac 51657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51306 - 51347
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  51306 atgcaattgactccacttgtgtatatctacatacaattcaac 51347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2301 - 2342
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  2301 atgcaactaactccacttgtgtatatctacatacaactcaac 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 374
Target Start/End: Complemental strand, 11782 - 11631
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 320  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| | || | || | ||||| | | |||||| ||||| ||||||||  |||| | |    
T  11782 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaaaacttaaaaaatactcaaaagggtcccctagtgcatgaagcaaag-ttcagata 11685  T
Q  321 gaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    ||||||||||||||||||  ||||||||||||  | |||||| |||||||||||    
T  11684 gaggctgactaaggctcagctcgcttaagcgaagggtagttcgcttaagcgacc 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11948 - 11912
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11948 atgcaactgac-ccacttgtgtatatctacatacaact 11912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11490 - 11449
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  11490 atgcaactgactccacttgtgtatatctacatataactcaac 11449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 11324 - 11196
Alignment:
Q  223 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 321  Q
    ||||||||| |||| |||||||||| |||||||||| ||||  ||||| || | | | ||||| | | |||||| |||||||||||||   |||| |||     
T  11324 agtaggatt-tgatgcctatacaagagttatacaagctaaaataaacacttaaaagtactcaaaagggtcccctagtgcacgaagcaagg-ttcagaaaa 11227  T
Q  322 aggctgactaaggctcacttcgcttaagcga 352  Q
    ||||||||||||||||| |||||||||||||    
T  11226 aggctgactaaggctcagttcgcttaagcga 11196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18675 - 18712
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18675 atgcaactgactccacttgtgtatatctacatacaact 18712  T

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Target: scaffold0298 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8410 - 8447
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8410 atgcaactgactccacttgtgtatatctacatacaact 8447  T

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Target: scaffold0298; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18494 - 18531
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18494 atgcaactgactccacttgtgtatatctacatacaact 18531  T

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Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8034 - 7997
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8034 atgcaactgactccacttgtgtatatctacatacaact 7997  T

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Target: scaffold0243; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12340 - 12303
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12340 atgcaactgactccacttgtgtatatctacatacaact 12303  T

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Target: scaffold0243; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16054 - 16017
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16054 atgcaactgactccacttgtgtatatctacatacaact 16017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27412 - 27449
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27412 atgcaactgactccacttgtgtatatctacatacaact 27449  T

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Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6811 - 6848
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6811 atgcaactgactccacttgtgtatatctacatacaact 6848  T

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Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44362 - 44403
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  44362 atgcaactaactccacttgtgtatatctacatacaactcaac 44403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47827 - 47790
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47827 atgcaactgactccacttgtgtatatctacatacaact 47790  T

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Target: scaffold0114; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42100 - 42135
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  42100 atgcaactgac-ccacttgtgtatatctacatacaac 42135  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3043 - 3080
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3043 atgcaactgactccacttgtgtatatctacatacaact 3080  T

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Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10618 - 10655
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10618 atgcaactgactccacttgtgtatatctacatacaact 10655  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 743 - 775
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||| |||||||||||    
T  743 actccacttgtgtatatctacgtacaactcaac 775  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 154301 - 154338
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  154301 atgcaactgactccacttgtgtatatctacatacaact 154338  T

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Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 252057 - 252094
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  252057 atgcaactgactccacttgtgtatatctacatacaact 252094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 152541 - 152601
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactc 72  Q
    |||||||||||||||||||||||||||||| | |||||||| | |||||||||||| ||||    
T  152541 ccacttgtgtatatctacatacaactcaaccatacatatatgtacatatgacttacaactc 152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 56771 - 56734
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  56771 atgcaactgacttcacttgtgtatatctacatacaact 56734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 75305 - 75342
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  75305 atgcaactgactgcacttgtgtatatctacatacaact 75342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 197446 - 197409
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||||||||||||||| |||||||||    
T  197446 atgcaactgactccacttgtgtatatcttcatacaact 197409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 258663 - 258700
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  258663 atgcaactaactccacttgtgtatatctacatacaact 258700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 21748 - 21715
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||| ||||||||||||||    
T  21748 gactccacttgtgtatatcaacatacaactcaac 21715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 147180 - 147213
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatac 34  Q
    |||||| |||||||||||||||||||||||||||    
T  147180 atgcaaatgactccacttgtgtatatctacatac 147213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5717 - 5753
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  5717 atgcaactgactccacttgtgtatatctacatacaac 5753  T

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Target: scaffold0337 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 10053 - 9950
Alignment:
Q  88 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 187  Q
    ||||||| ||||||||||||||||||| |  |  || |||||| |||||| || | | ||||| |||||||| |||||||||||||||||||  ||||||    
T  10053 tccagaaaatacacaattaattataatcaaactaatgcatcaagttcattaaacatagtatatgttcacttggtttcatactcaatcatctc-caaattc 9955  T
Q  188 actaa 192  Q
    |||||    
T  9954 actaa 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10266 - 10226
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  10266 atgcaactgac-ccacttatgtatatctacatacaactcaac 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 8767 - 8803
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  8767 actccacttgtgtatatctacatacaactcaactaca 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 20015 - 20079
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactcc 73  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| | | ||||||||| |||||    
T  20015 gactccacttgtgtatatctacatacaactcaacaatgcatatatataacatgacttacaactcc 20079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 7113 - 7184
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  7113 caactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 57190 - 57154
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  57190 atgcaactgactccacttgtgtatatctacatacaac 57154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 141443 - 141479
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaac 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  141443 atgcaactgactccacttgtgtatatctacatacaac 141479  T

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Target: scaffold1427 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1009 - 1051
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  1009 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 1207 - 1273
Alignment:
Q  125 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaa 192  Q
    |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||  |||||||||||    
T  1207 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattcactaa 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 175 - 133
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaacta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  175 atgcaactgac-ccacttgtgtatatctacatacaactcaacta 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8582 - 8649
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttac 67  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| ||||||||||||||    
T  8582 atgcaactaactccacttgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttac 8649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 44120 - 44049
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  44120 caactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 44049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 49186 - 49115
Alignment:
Q  4 caactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  49186 caactgactccacttgtgtatatctacatacaacttgacaatgcatatatgtacatatgacttacaactccg 49115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5910 - 5872
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5910 atgcaactgactccacttgtgtatatcttcatacaactc 5872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 330 - 296
Alignment:
Q  8 tgactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||||    
T  330 tgactccacttgtgtatatctacatacaactcaac 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 397 - 359
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  397 atgcaactgactcctcttgtgtatatctacatacaactc 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3380 - 3418
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  3380 atgcaactaactccacttgtgtatatctacatacaactc 3418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17111 - 17073
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  17111 atgcaattgactccacttgtgtatatctacatacaactc 17073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17434 - 17396
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  17434 atgcaactaactccacttgtgtatatctacatacaactc 17396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 56032 - 56106
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    |||||||| |||||||||||||||||||||||||||||  || |  ||||||| | |||||||||||| ||||||    
T  56032 atgcaactaactccacttgtgtatatctacatacaactagacaatgcatatatgtacatatgacttacaactccg 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 42933 - 42875
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||| |||||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  42933 gactcaacttgtgtatatctacatacaactcaacaatgcatatatataatatgacttac 42875  T

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Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 45123 - 45090
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  45123 gactcaacttgtgtatatctacatacaactcaac 45090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 171818 - 171780
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  171818 atgcaactgactccacttgtttatatctacatacaactc 171780  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34948 - 34986
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  34948 atgcaactgactccacttgtgtatatctacatgcaactc 34986  T

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Target: scaffold1853 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 802 - 737
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttactactccg 74  Q
    |||||||||||||||||||||||||||||||||  |  ||||| | | ||||||||||| ||||||    
T  802 gactccacttgtgtatatctacatacaactcaagaatgcatatgtataatatgacttacaactccg 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 492 - 532
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  492 atgcaactgac-ccacttgtgtatatctacatacaactcaac 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3304 - 3267
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  3304 atgcaactgactccgcttgtgtatatctacatacaact 3267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7419 - 7459
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  7419 atgcaactgac-ccacttgtgtatatctacatacaactcaac 7459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 18060 - 18121
Alignment:
Q  313 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 374  Q
    |||| ||| ||||||||||||||||| ||||||||||||| || ||| || |||||||||||    
T  18060 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaaaggtagctcgcttaagcgacc 18121  T

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Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9411 - 9448
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  9411 atgcaactgaatccacttgtgtatatctacatacaact 9448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51708 - 51668
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  51708 atgcaactgac-ccacttgtgtatatctacatacaactcaac 51668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20525 - 20485
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  20525 atgcaactgac-ccacttgtgtatatctacatacaactcaac 20485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 134867 - 134924
Alignment:
Q  358 agttcacttaagcgaccggcttacagaaggtctgggttctgctcgcttagggttcgct 415  Q
    ||||| ||||||||||| |||||||| |||||||||||| | ||||||| || |||||    
T  134867 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgct 134924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 153347 - 153311
Alignment:
Q  2 tgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||| |||||||||||||||||||||||||||    
T  153347 tgcaactgac-ccacttgtgtatatctacatacaactc 153311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 134820 - 134882
Alignment:
Q  289 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 353  Q
    ||||||| ||||||||||||| | |||| ||| ||||||||||| ||||| ||||||||||||||    
T  134820 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgac 134882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38673 - 38636
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  38673 atgcaactgactccactcgtgtatatctacatacaact 38636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 136733 - 136696
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  136733 atgcaactgactccactcgtgtatatctacatacaact 136696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 370557 - 370594
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaact 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  370557 atgcaactgacaccacttgtgtatatctacatacaact 370594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 821 - 789
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||||||||    
T  821 actccacttgtgtatatctacatacaactcaac 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 6299 - 6343
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctca 284  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||    
T  6299 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 6343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 29376 - 29412
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| ||||||||||||||||||    
T  29376 actccacttgtgtatatcaacatacaactcaactaca 29412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 34614 - 34650
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| |||||||| |||||||||    
T  34614 actccacttgtgtatatcaacatacaattcaactaca 34650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 146745 - 146801
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgactt 65  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||| | |||||||||    
T  146745 gactccacttgtgtatatatacatacaactcaacaatgcatatatatgatatgactt 146801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 141494 - 141534
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  141494 atgcaactgac-ccacttgtgtatatctacatacaacccaac 141534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 6027 - 5972
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttac 67  Q
    |||||| ||||||||||||||||||||||| | |||||||| | ||||||||||||    
T  6027 ccacttatgtatatctacatacaactcaaccatacatatatgtacatatgacttac 5972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 4120 - 4089
Alignment:
Q  9 gactccacttgtgtatatctacatacaactca 40  Q
    ||||||||||||||||||||||||||||||||    
T  4120 gactccacttgtgtatatctacatacaactca 4089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 9922 - 9887
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactac 45  Q
    |||||||| |||||||||||||||||||||||||||    
T  9922 actccactagtgtatatctacatacaactcaactac 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 1222 - 1192
Alignment:
Q  9 gactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||    
T  1222 gactccacttgtgtatatctacatacaactc 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 1265 - 1236
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  1265 gactccacttgtgtatatctacatacaact 1236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 13780 - 13838
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||| |||||||||||||||||||||| ||||| |  ||||||| | |||||||||||    
T  13780 gactcaacttgtgtatatctacatacaaatcaacaatgcatatatataatatgacttac 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 141 - 179
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  141 atgcaactgactccacttgtgtatatcagcatacaactc 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44755 - 44829
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaactacacatatat-ttcatatgacttactactccg 74  Q
    ||||||| |||||||||||||||||||| ||||||||| ||| |  ||||||| |  ||||||||||| ||||||    
T  44755 atgcaacggactccacttgtgtatatcttcatacaacttaacaatgcatatatataaatatgacttacaactccg 44829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 29985 - 30018
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||| |||||||||||||||||||||    
T  29985 gactccacttgtatatatctacatacaactcaac 30018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28032 - 28070
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactc 39  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  28032 atgcaactaactccactggtgtatatctacatacaactc 28070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 55898 - 55868
Alignment:
Q  9 gactccacttgtgtatatctacatacaactc 39  Q
    |||||||||||||||||||||||||||||||    
T  55898 gactccacttgtgtatatctacatacaactc 55868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 55941 - 55912
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  55941 gactccacttgtgtatatctacatacaact 55912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18173 - 18115
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactacacatatatttcatatgacttac 67  Q
    ||||| |||||||||||||||||||||||||||| |   |||||| | |||||||||||    
T  18173 gactcaacttgtgtatatctacatacaactcaacaatgaatatatataatatgacttac 18115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 2433 - 2462
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  2433 gactccacttgtgtatatctacatacaact 2462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 1391 - 1343
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    |||||||||||||||||||   ||||||||||||  |||||||||||||    
T  1391 ggttcgcttgagcgaactttggacagaatcaaaattgtttttcgctcac 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 1780 - 1747
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    |||||||||||||||||||||||||||| |||||    
T  1780 gactccacttgtgtatatctacatacaattcaac 1747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 4087 - 4058
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  4087 gactccacttgtgtatatctacatacaact 4058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 6308 - 6337
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  6308 gactccacttgtgtatatctacatacaact 6337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 4923 - 4956
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  4923 gactcaacttgtgtatatctacatacaactcaac 4956  T

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Target: scaffold0434 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 1352 - 1323
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  1352 gactccacttgtgtatatctacatacaact 1323  T

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Target: scaffold0377 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 3372 - 3401
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  3372 ccacttgtgtatatctacatacaactcaac 3401  T

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Target: scaffold0377; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 7411 - 7440
Alignment:
Q  13 ccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||||||||||||||||||    
T  7411 ccacttgtgtatatctacatacaactcaac 7440  T

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Target: scaffold0309 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 6005 - 6038
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  6005 gactcaacttgtgtatatctacatacaactcaac 6038  T

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Target: scaffold0309; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 8157 - 8190
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  8157 gactcaacttgtgtatatctacatacaactcaac 8190  T

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Target: scaffold0239 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14504 - 14464
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  14504 atgcaactgac-ccacttgtgtatatctacatacaacccaac 14464  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 9512 - 9541
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  9512 gactccacttgtgtatatctacatacaact 9541  T

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Target: scaffold0178 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 25646 - 25679
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  25646 gactcaacttgtgtatatctacatacaactcaac 25679  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17647 - 17687
Alignment:
Q  1 atgcaactgactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  17647 atgcaactgac-ccacttgtgtatatctacatacaacccaac 17687  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 62014 - 61985
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  62014 gactccacttgtgtatatctacatacaact 61985  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 223529 - 223496
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaac 42  Q
    ||||||||||||||| ||||||||||||||||||    
T  223529 gactccacttgtgtagatctacatacaactcaac 223496  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 207743 - 207714
Alignment:
Q  9 gactccacttgtgtatatctacatacaact 38  Q
    ||||||||||||||||||||||||||||||    
T  207743 gactccacttgtgtatatctacatacaact 207714  T

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Target: scaffold0585 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 8535 - 8499
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    |||||||||||||||||| | ||||||||||||||||    
T  8535 actccacttgtgtatatcaagatacaactcaactaca 8499  T

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Target: scaffold0525 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 8972 - 9008
Alignment:
Q  9 gactccacttgtgtatatctacatacaactcaactac 45  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  8972 gactcgacttgtgtatatcaacatacaactcaactac 9008  T

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Target: scaffold0480 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 577 - 605
Alignment:
Q  10 actccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||||||||||||||||    
T  577 actccacttgtgtatatctacatacaact 605  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 3372 - 3328
Alignment:
Q  240 tatacaagggttatacaagttaaaggaaacattttagaatgctca 284  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||||    
T  3372 tatacaaaggttatacaagttgaaagaaacatttcagaatgctca 3328  T

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Target: scaffold0322 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 19457 - 19485
Alignment:
Q  10 actccacttgtgtatatctacatacaact 38  Q
    |||||||||||||||||||||||||||||    
T  19457 actccacttgtgtatatctacatacaact 19485  T

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Target: scaffold0253 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 5360 - 5396
Alignment:
Q  10 actccacttgtgtatatctacatacaactcaactaca 46  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  5360 actccacttttgtatatctacatataactcaactaca 5396  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 49597 - 49645
Alignment:
Q  408 ggttcgcttgagcgaacttctaacagaatcaaaacggtttttcgctcac 456  Q
    |||||| ||||||||||||   |||||||||||| ||||||||||||||    
T  49597 ggttcgattgagcgaactttggacagaatcaaaatggtttttcgctcac 49645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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