View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11646_low_37 (Length: 285)
Name: NF11646_low_37
Description: NF11646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11646_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 2259377 - 2259644
Alignment:
| Q |
19 |
aaaaagtacttctactgttagtgacaaataaactttgaaatgaaagtgatagtaagttcatacacactgtagctccttcttggcccctacattgtaattg |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2259377 |
aaaaagtacttctactgttagtgacaaataaactttgaaatgaaagtgatagtaagttcatacacactgtagctccttcttggcccctacattgtaattg |
2259476 |
T |
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| Q |
119 |
taacccatta------attccatcaccataacaacacttcattccacttctagtacaatattagtgttgcttattcaatctctttatatatctatctatc |
212 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2259477 |
taacccattattattaattccatcaccataacaacacttcattccacttctagtacaatattagtgttgcttattcaatctctttatatatctatctatc |
2259576 |
T |
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| Q |
213 |
actttgattccaaattaatatcaaatttagttaacattatatttatacaatatcacattcatctcact |
280 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2259577 |
actttgattccaaattaatatcaaacttagttaacattatatttatacaatatcacattcatttcact |
2259644 |
T |
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