View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11646_low_5 (Length: 622)

Name: NF11646_low_5
Description: NF11646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11646_low_5
NF11646_low_5
[»] chr8 (9 HSPs)
chr8 (5-303)||(32627764-32628062)
chr8 (385-603)||(32627405-32627623)
chr8 (64-301)||(32704047-32704288)
chr8 (82-303)||(7298000-7298221)
chr8 (387-593)||(32708996-32709202)
chr8 (105-255)||(32709802-32709952)
chr8 (401-560)||(7292554-7292713)
chr8 (404-570)||(7297579-7297745)
chr8 (54-155)||(7293498-7293599)
[»] chr4 (2 HSPs)
chr4 (2-263)||(5811406-5811667)
chr4 (410-586)||(5811047-5811223)
[»] chr3 (2 HSPs)
chr3 (1-278)||(27736724-27737001)
chr3 (395-603)||(27736303-27736511)
[»] chr6 (4 HSPs)
chr6 (400-597)||(21943144-21943341)
chr6 (69-252)||(20115800-20115983)
chr6 (66-252)||(21943673-21943859)
chr6 (385-587)||(20116529-20116731)
[»] chr5 (1 HSPs)
chr5 (394-555)||(8030369-8030530)


Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 5 - 303
Target Start/End: Original strand, 32627764 - 32628062
Alignment:
Q  5 aaaggaaccaggaactcctgagaagaagcatggacccagttcagtccccatttcttcaagtagtttttctttgaaaatgtcaagggacttaaatatggtg 104  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  32627764 aaaggaaccaggaactcctgagaagaagcatggacccatttcagtccccatttcatcaagtagtttttctttgaaaatgtcaagggacgtaaatatggtg 32627863  T
Q  105 ttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggagatttatgattaagttttcgacaaagcttttccacaactttgataatatcta 204  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32627864 ttgaagtcatttcccggtagatcgttcaaatatatcatatattcgggagatttatgattaagttttcgacaaagcttttccacaactttgataatatcta 32627963  T
Q  205 agatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattgtcaagcttttggagagtgtgttgttgtacatgctggttatggcttcat 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32627964 agatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattgtcaagcttttggagagtgtgttgttgtacatgctggttatggcttcat 32628062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 385 - 603
Target Start/End: Complemental strand, 32627623 - 32627405
Alignment:
Q  385 ttttgttgattggttattaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggctt 484  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32627623 ttttgttgattggtgattaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggctt 32627524  T
Q  485 actacaagcaattccaaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaa 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32627523 actacaagcaattccaaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaa 32627424  T
Q  585 aagcgacaatccaacaagc 603  Q
    |||||||||||||||||||    
T  32627423 aagcgacaatccaacaagc 32627405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 64 - 301
Target Start/End: Original strand, 32704047 - 32704288
Alignment:
Q  64 gtagtttttctttgaaaatgtcaagggacttaaatatggtgttgaagtcatttcccggtagatcgttcaaaaatatc----atatattcgggagatttat 159  Q
    |||| |||||||||||  |||| |||||| ||||||   |||||||||| || || ||||||||||||||||| | |    |||||||| ||||||||||    
T  32704047 gtagattttctttgaacgtgtcgagggacctaaatacattgttgaagtcgttccctggtagatcgttcaaaaagaccttatatatattcaggagatttat 32704146  T
Q  160 gattaagttttcgacaaagcttttccacaactttgataatatctaagatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattgtcaa 259  Q
    ||||||| | |||||||| |||||||||||| |||||| ||||| ||||| ||||||||||||||| |||| |||||||||| || |||||||||| |||    
T  32704147 gattaagctctcgacaaatcttttccacaaccttgatagtatctgagatcgccaacaaagtgtttggtccataagagcaacccaaatctgcaattgccaa 32704246  T
Q  260 gcttttggagagtgtgttgttgtacatgctggttatggcttc 301  Q
    |||| ||| |||||| || ||||||||| | |||||||||||    
T  32704247 gcttatggggagtgttttattgtacatgtttgttatggcttc 32704288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 82 - 303
Target Start/End: Original strand, 7298000 - 7298221
Alignment:
Q  82 tgtcaagggacttaaatatggtgttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggagatttatgattaagttttcgacaaagctt 181  Q
    ||||||| |||||||||||| |||||||||||||||| |  | ||| || ||||||||| | || |||||||||  ||| || | || | | ||||||||    
T  7298000 tgtcaagtgacttaaatatgttgttgaagtcatttccagaaacatcattaaaaaatatcttgtactcgggagatgaatggttcaattgttggcaaagctt 7298099  T
Q  182 ttccacaactttgataatatctaagatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattgtcaagcttttggagagtgtgttgttg 281  Q
     ||||||||  ||||||||||| | | ||| ||||||||||||| ||||||||| |||||||| ||||||||||  | ||||||| | ||||| |||  |    
T  7298100 ctccacaaccatgataatatctgataccacaaacaaagtgtttggtccagaagaacaacctaaatctgcaattgcaaggcttttgaaaagtgttttggag 7298199  T
Q  282 tacatgctggttatggcttcat 303  Q
    || | ||| |||||||||||||    
T  7298200 tagaggcttgttatggcttcat 7298221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 593
Target Start/End: Complemental strand, 32709202 - 32708996
Alignment:
Q  387 ttgttgattggttattaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttac 486  Q
    |||||||||||| |||| ||||||||| |||  ||   ||||||| |||||||||||||| ||  |  | ||||||||||  |||||  | |  || |||    
T  32709202 ttgttgattggtgattatttaggttccggagaatgtgaacaacaataagggcaacatttacatggctcgtacaagcccctcaaatgtacttactgcgtac 32709103  T
Q  487 tacaagcaattccaaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaaaa 586  Q
    ||||| ||||| ||||  ||||| |||||||||||||||||||||||  | ||| |||||||||| ||| |||||||| |||||||| ||||||||||||    
T  32709102 tacaaccaatttcaaagtgatttttctctttttctcaagtgtcgtgcaaaggaagtagttgaaggtggtcgcatgattctaacatttttaggaagaaaaa 32709003  T
Q  587 gcgacaa 593  Q
    | |||||    
T  32709002 gtgacaa 32708996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 32709802 - 32709952
Alignment:
Q  105 ttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggagatttatgattaagttttcgacaaagcttttccacaactttgataatatcta 204  Q
    |||||||| || ||||| | ||||||||| || | | | ||||||||||||| |||||| |  | |||||||||||||||||| || |||||||  |||     
T  32709802 ttgaagtcgttacccggcaaatcgttcaagaagaccttgtattcgggagattcatgattcaactctcgacaaagcttttccacgaccttgataaattctg 32709901  T
Q  205 agatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattg 255  Q
    | | |||||||||||||||||  |||||||||||||| |||||||||||||    
T  32709902 ataccaccaacaaagtgtttggcccagaagagcaacccaagtctgcaattg 32709952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 560
Target Start/End: Complemental strand, 7292713 - 7292554
Alignment:
Q  401 ttaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttactacaagcaattcca 500  Q
    ||||||||||||| || |||  ||| ||||| ||||| |||||||| ||   |  |||||| ||||  ||||||||||||||||||||| ||||||| ||    
T  7292713 ttaattaggttcccgaaggtatagataacaataagggtaacatttacatcagcgacacaagtccctcaaatgtcgtcaaggcttactacgagcaatttca 7292614  T
Q  501 aatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcat 560  Q
    || ||| || ||  |||||||||||||||| ||  | ||| | |||||||||||| ||||    
T  7292613 aagagacttgtcgatttttctcaagtgtcgcgcaaaggaattggttgaagggggtcgcat 7292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 570
Target Start/End: Complemental strand, 7297745 - 7297579
Alignment:
Q  404 attaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttactacaagcaattccaaat 503  Q
    |||||||||| ||||||  ||| ||||| ||| |||||||||| ||   |  |||||| ||||  ||||| ||||| || |||||  | |||||  |||     
T  7297745 attaggttccggagggtatagagaacaataagagcaacatttacatcaactacacaagtccctcaaatgttgtcaaagcatactatgatcaatttaaaag 7297646  T
Q  504 agatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataaca 570  Q
    ||| |||||  ||||||||||||||||||| || ||| |||||||||||||||||||| || |||||    
T  7297645 agacttctcggtttttctcaagtgtcgtgcagaggaactagttgaagggggttgcatggttctaaca 7297579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 7293498 - 7293599
Alignment:
Q  54 atttcttcaagtagtttttctttgaaaatgtcaagggacttaaatatggtgttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggag 153  Q
    ||||| ||||||||||| | ||| ||  | ||||| |||||||| ||| ||||||||||||| || |  |||||||| ||||| ||| | ||||||||||    
T  7293498 atttcatcaagtagtttatgtttaaagctatcaagtgacttaaaaatgttgttgaagtcattccctgaaagatcgttaaaaaagatcttgtattcgggag 7293597  T
Q  154 at 155  Q
    ||    
T  7293598 at 7293599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 5e-67; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 5811406 - 5811667
Alignment:
Q  2 ataaaaggaaccaggaactcctgagaagaagcatggacccagttcagtccccatttcttcaagtagtttttctttgaaaatgtcaagggacttaaatatg 101  Q
    ||||||||| |||||||| || |||||| |||| ||||||| ||||||  ||||||| | | ||||||||||||||||  ||||||||||| |||||| |    
T  5811406 ataaaaggatccaggaacaccagagaagtagcaaggacccatttcagtttccatttcattacgtagtttttctttgaaggtgtcaagggacataaatacg 5811505  T
Q  102 gtgttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggagatttatgattaagttttcgacaaagcttttccacaactttgataatat 201  Q
      |||||| |||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |    
T  5811506 tcgttgaaatcatttcccggtagatcgttcaaaaagactttatattcgggagatttatgattaagttctcgacaaagcttttcaacaaccttgataattt 5811605  T
Q  202 ctaagatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattgtcaagctt 263  Q
    |  |||||||||| |||||||||| |||| |||||||||| ||||||||||||| |||||||    
T  5811606 cagagatcaccaagaaagtgtttggtccaaaagagcaacccaagtctgcaattgccaagctt 5811667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 410 - 586
Target Start/End: Complemental strand, 5811223 - 5811047
Alignment:
Q  410 ttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttactacaagcaattccaaatagattt 509  Q
    ||||||||| || ||||||||||||||||||||||||  |  | |||||||||||||  ||||||  ||||||||||||||||||||| |||| ||||||    
T  5811223 ttcctgaggttggagacaacaacaagggcaacatttacctgacgagcacaagcccctcaaatgtccacaaggcttactacaagcaatttcaaacagattt 5811124  T
Q  510 ctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaaaa 586  Q
    |||| |||||||||||||||||||||||||| |||||||||| |||  ||||||| |||||||| ||||| ||||||    
T  5811123 ctctttttttctcaagtgtcgtgccgaagaactagttgaaggtggtcacatgattctaacatttttaggacgaaaaa 5811047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 27736724 - 27737001
Alignment:
Q  1 cataaaaggaaccaggaactcctgagaagaagcatggacccagttcagtccccatttcttcaagtagtttttctttgaaaatgtcaagggacttaaatat 100  Q
    ||||||| ||||||||||||||  ||||| |||| || || | || |||  ||||||| ||| ||||||| ||||||||  ||||||||||||| ||||     
T  27736724 cataaaatgaaccaggaactccatagaagtagcacgggcctattttagtttccatttcatcacgtagtttctctttgaaggtgtcaagggacttgaatac 27736823  T
Q  101 ggtgttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggagatttatgattaagttttcgacaaagcttttccacaactttgataata 200  Q
    | ||||||||||||||||||||||||| ||||||||||   ||||||| ||||||||||||| | |   | ||||||| ||||||||| ||||||||||     
T  27736824 gttgttgaagtcatttcccggtagatcattcaaaaatactttatattcaggagatttatgatgatgcacttgacaaagtttttccacacctttgataatt 27736923  T
Q  201 tctaagatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaattgtcaagcttttggagagtgtgttg 278  Q
    ||| | |||||||||| ||||||||  ||| |||||||||| ||||||||||||| ||||||| |||  |||||||||    
T  27736924 tctgatatcaccaacatagtgtttggcccaaaagagcaacccaagtctgcaattgccaagcttctgggaagtgtgttg 27737001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 395 - 603
Target Start/End: Complemental strand, 27736511 - 27736303
Alignment:
Q  395 tggttattaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttactacaagca 494  Q
    |||| ||| |||||||||| |||||||| |||||||||||||| ||||||||  |  | |||||||||||||  || ||| |||||||||||||||||||    
T  27736511 tggtgattcattaggttccagagggtgctgacaacaacaagggaaacatttacctgacgagcacaagcccctcaaacgtcatcaaggcttactacaagca 27736412  T
Q  495 attccaaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaaaagcgacaat 594  Q
    ||| | || |||||||||| |||||||    ||||||||| ||||| |||||||||| | |   |||||| ||||| || ||||||| ||| ||||||||    
T  27736411 atttcgaacagatttctctttttttcttcgatgtcgtgccaaagaattagttgaaggagctcaaatgattctaacacttttaggaaggaaatgcgacaat 27736312  T
Q  595 ccaacaagc 603  Q
    ||| |||||    
T  27736311 ccatcaagc 27736303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 400 - 597
Target Start/End: Complemental strand, 21943341 - 21943144
Alignment:
Q  400 attaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttactacaagcaattcc 499  Q
    ||||| ||||| ||| |||||| ||||||||| ||||||||||||||  |  | | |||||||||||  |||||| |||||||||||||  ||||||| |    
T  21943341 attaaataggtccctaagggtgtagacaacaataagggcaacatttacttggcgaccacaagcccctcaaatgtcttcaaggcttactatgagcaatttc 21943242  T
Q  500 aaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaaaagcgacaatcca 597  Q
    | | |||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||| |||| || |||||||||||    
T  21943241 atagagatttatctctttttctaaagtgtcgtgcccaagaactagttgaagggggttgcatggttataacatttttagtaagagaatgcgacaatcca 21943144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 69 - 252
Target Start/End: Complemental strand, 20115983 - 20115800
Alignment:
Q  69 ttttctttgaaaatgtcaagggacttaaatatggtgttgaagtcatttcccggtagatcgttcaaaaatatcat-atattcgggagatttatgattaagt 167  Q
    |||||||||||  ||||||||||||||||||||  ||||||||| ||||| | ||||||||||||| | | ||| |||||| ||||||| |||||| | |    
T  20115983 ttttctttgaaggtgtcaagggacttaaatatgccgttgaagtcgtttccggatagatcgttcaaagaga-catcatattcaggagattcatgattcaat 20115885  T
Q  168 tttcgacaaagcttttccacaactttgataatatctaagatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaa 252  Q
    | |  |||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  20115884 tctatacaaagcttttccacaaccttgataatttctgagatcaccaacaaggtgtttggtcctgaagagcaacctaagtctgcaa 20115800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 66 - 252
Target Start/End: Original strand, 21943673 - 21943859
Alignment:
Q  66 agtttttctttgaaaatgtcaagggacttaaatatggtgttgaagtcatttcccggtagatcgttcaaaaatatcatatattcgggagatttatgattaa 165  Q
    ||||||||||||||  | ||||||||| |||||| | ||||||| || ||||| ||||||||||||||||||| | ||||||||||||||| |||||| |    
T  21943673 agtttttctttgaaggtctcaagggacctaaatacgttgttgaaatcgtttccgggtagatcgttcaaaaataccttatattcgggagattcatgattca 21943772  T
Q  166 gttttcgacaaagcttttccacaactttgataatatctaagatcaccaacaaagtgtttgatccagaagagcaacctaagtctgcaa 252  Q
      | | ||||||||||||||||||| || ||||| ||  |||||||||||||||| |||  ||||||||| ||||| ||||||||||    
T  21943773 actcttgacaaagcttttccacaacatttataatctccgagatcaccaacaaagtatttagtccagaagaacaacccaagtctgcaa 21943859  T

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Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 587
Target Start/End: Original strand, 20116529 - 20116731
Alignment:
Q  385 ttttgttgattggttattaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggctt 484  Q
    |||||| ||| ||| ||||||||||||||  | ||||   |||||||||||||||| ||||| ||| | | ||||||||| |  |||||| ||||||| |    
T  20116529 ttttgtcgatcggtgattaattaggttcccaatggtgtgaacaacaacaagggcaatatttacatagcgaacacaagcccatcaaatgtcttcaaggcat 20116628  T
Q  485 actacaagcaattccaaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggttgcatgattataacatttgtaggaagaaa 584  Q
    | ||  | ||||| |  || |||||||||||||||||||||||||||||| ||||| | |||||||| |||||||||||| | |||||| |||||||| |    
T  20116629 attatgaacaatttcgtattgatttctctctttttctcaagtgtcgtgccaaagaattggttgaaggaggttgcatgattctgacatttataggaagaga 20116728  T
Q  585 aag 587  Q
    |||    
T  20116729 aag 20116731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 555
Target Start/End: Original strand, 8030369 - 8030530
Alignment:
Q  394 ttggttattaattaggttcctgagggtgcagacaacaacaagggcaacatttatatatccagcacaagccccttgaatgtcgtcaaggcttactacaagc 493  Q
    ||||| |||| |||||||||| | |||| ||| || || ||||| |||||||| ||  | | ||||||||||   || ||  |||| |||||| |  |||    
T  8030369 ttggtgattacttaggttcctaaaggtgtagagaataataagggtaacatttacatggctaccacaagccccgcaaacgtgctcaacgcttaccatgagc 8030468  T
Q  494 aattccaaatagatttctctctttttctcaagtgtcgtgccgaagaaatagttgaagggggt 555  Q
    |||| |||| |||||||||  | ||||||||||||||||| |||||| | ||||| ||||||    
T  8030469 aatttcaaagagatttctcattgtttctcaagtgtcgtgcagaagaacttgttgacgggggt 8030530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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