View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11647_low_14 (Length: 241)
Name: NF11647_low_14
Description: NF11647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11647_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 43409089 - 43408911
Alignment:
| Q |
21 |
aaaaaggtgatactcactgcacgcttcttggaatcccaatacatccatgtcaccaacataacaagctgaatcaaccgttgatatgcagcaactcatagtt |
120 |
Q |
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| T |
43409089 |
aaaaaggtgatactcactgcacgcttcttggaatcccaatacatccatgtcaccaacataacaagctgaatcaaccgttgatatgcagcaactcatagtt |
43408990 |
T |
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| Q |
121 |
gaaacaccacaacctgatgcaccactacttccctttcctcctccttgttgttgttgtaggcaaggagcccatgttagtg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43408989 |
gaaacaccacaacctgatgcaccactacttccctttcctcctccttgttgttgttgtaggcaaggagcccatgttagtg |
43408911 |
T |
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