View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11647_low_18 (Length: 238)
Name: NF11647_low_18
Description: NF11647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11647_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 47080075 - 47080297
Alignment:
| Q |
1 |
aacaaacgaatatcgtgatgttttaatttaatttctggaatgtgttgtatctatctggctgcaatttaaactcatacagaacgcgtgcgtcccttgatct |
100 |
Q |
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| T |
47080075 |
aacaaacgaatatcgtgatgatttaatttaatttctggaatgtgttgtatctatctggctgcaatttaaactcatacagaacgcgtgcgtcccttgatct |
47080174 |
T |
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| Q |
101 |
tatccaattttactccatcaattcaatgcaaagaattggtagtcactcggaaaatgcttattaattcataatattaactatttgaccaattcgagatatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47080175 |
tatccaattttactccatcaattcaatgcaaagaattggtagtcactcggaaaatgcttattaattcataatattaactatttgaccaattcgagatatc |
47080274 |
T |
|
| Q |
201 |
aaacaaattttatattcattattg |
224 |
Q |
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||||||| |||||||||||||||| |
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| T |
47080275 |
aaacaaa-tttatattcattattg |
47080297 |
T |
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