View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11647_low_20 (Length: 219)

Name: NF11647_low_20
Description: NF11647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11647_low_20
NF11647_low_20
[»] chr5 (41 HSPs)
chr5 (1-208)||(23076799-23077006)
chr5 (1-208)||(23082246-23082453)
chr5 (28-208)||(39609378-39609558)
chr5 (28-208)||(24057071-24057252)
chr5 (1-205)||(26649839-26650050)
chr5 (1-205)||(26921424-26921635)
chr5 (46-208)||(25419314-25419475)
chr5 (89-208)||(5342224-5342342)
chr5 (155-208)||(21676014-21676067)
chr5 (49-109)||(27636169-27636229)
chr5 (149-208)||(42242160-42242222)
chr5 (155-208)||(22759652-22759704)
chr5 (89-173)||(6404976-6405060)
chr5 (137-208)||(28260377-28260453)
chr5 (3-208)||(19075496-19075704)
chr5 (3-208)||(31253474-31253682)
chr5 (133-183)||(7774187-7774237)
chr5 (55-171)||(23433328-23433443)
chr5 (55-171)||(23444693-23444808)
chr5 (28-208)||(18409480-18409670)
chr5 (28-109)||(21661899-21661981)
chr5 (1-208)||(6728699-6728910)
chr5 (133-183)||(33535857-33535907)
chr5 (175-208)||(19507644-19507677)
chr5 (175-208)||(37565658-37565691)
chr5 (48-208)||(43244203-43244366)
chr5 (177-208)||(596842-596873)
chr5 (16-77)||(16775691-16775757)
chr5 (130-208)||(23562053-23562134)
chr5 (149-208)||(19235487-19235547)
chr5 (175-208)||(20340147-20340180)
chr5 (175-208)||(20346750-20346783)
chr5 (51-95)||(20989807-20989851)
chr5 (49-77)||(22500417-22500445)
chr5 (49-77)||(22506995-22507023)
chr5 (176-208)||(22507131-22507163)
chr5 (149-208)||(28890835-28890895)
chr5 (149-208)||(28910739-28910799)
chr5 (149-208)||(28926007-28926067)
chr5 (149-208)||(28932430-28932490)
chr5 (149-208)||(28947134-28947194)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-206)||(143405-143610)
[»] chr6 (27 HSPs)
chr6 (1-208)||(17208242-17208456)
chr6 (4-208)||(29925158-29925365)
chr6 (28-208)||(13939903-13940084)
chr6 (1-208)||(10464702-10464914)
chr6 (1-208)||(10471224-10471436)
chr6 (27-109)||(23235531-23235615)
chr6 (28-208)||(23235841-23236026)
chr6 (1-208)||(2707895-2708103)
chr6 (8-208)||(7428858-7429062)
chr6 (28-166)||(17413541-17413682)
chr6 (1-108)||(19448809-19448917)
chr6 (3-208)||(28707466-28707674)
chr6 (1-108)||(19467335-19467443)
chr6 (89-208)||(22757879-22757999)
chr6 (8-178)||(14595145-14595316)
chr6 (133-183)||(19097243-19097293)
chr6 (1-108)||(19450803-19450911)
chr6 (133-183)||(24412011-24412061)
chr6 (133-183)||(29158627-29158677)
chr6 (145-208)||(938122-938186)
chr6 (175-208)||(19097206-19097239)
chr6 (145-208)||(19726279-19726343)
chr6 (175-208)||(24411974-24412007)
chr6 (175-208)||(27766979-27767012)
chr6 (130-208)||(14996399-14996481)
chr6 (147-208)||(18799051-18799113)
chr6 (1-74)||(27766793-27766867)
[»] scaffold1251 (1 HSPs)
scaffold1251 (1-208)||(1758-1971)
[»] chr3 (34 HSPs)
chr3 (1-208)||(18757486-18757691)
chr3 (1-208)||(12725629-12725845)
chr3 (1-208)||(10609183-10609389)
chr3 (1-171)||(11965379-11965550)
chr3 (89-208)||(32388530-32388648)
chr3 (1-172)||(12201842-12202018)
chr3 (89-208)||(30597375-30597493)
chr3 (1-108)||(12363100-12363209)
chr3 (80-208)||(18136760-18136891)
chr3 (1-108)||(12356551-12356660)
chr3 (155-208)||(24123790-24123843)
chr3 (80-208)||(18130264-18130395)
chr3 (1-108)||(11306322-11306430)
chr3 (1-108)||(12469459-12469567)
chr3 (8-208)||(14648714-14648918)
chr3 (1-179)||(2249513-2249692)
chr3 (155-208)||(11957112-11957164)
chr3 (16-95)||(9692035-9692119)
chr3 (137-208)||(29550496-29550575)
chr3 (130-207)||(16383322-16383398)
chr3 (28-172)||(11645302-11645452)
chr3 (3-208)||(5840773-5840981)
chr3 (3-208)||(45221226-45221434)
chr3 (1-108)||(2270808-2270916)
chr3 (175-208)||(16832872-16832905)
chr3 (1-94)||(16332223-16332317)
chr3 (16-95)||(15374137-15374221)
chr3 (133-180)||(16832815-16832862)
chr3 (89-208)||(22163321-22163443)
chr3 (152-208)||(10553545-10553603)
chr3 (145-207)||(14653157-14653220)
chr3 (176-208)||(16332105-16332137)
chr3 (111-208)||(17190462-17190560)
chr3 (147-208)||(26008803-26008865)
[»] chr2 (31 HSPs)
chr2 (28-208)||(32911970-32912151)
chr2 (89-208)||(45028052-45028170)
chr2 (4-208)||(22797117-22797328)
chr2 (22-171)||(24651870-24652022)
chr2 (155-208)||(43692985-43693038)
chr2 (155-208)||(21133808-21133861)
chr2 (155-208)||(27368063-27368116)
chr2 (155-208)||(36800155-36800208)
chr2 (1-208)||(25107913-25108129)
chr2 (1-208)||(23297043-23297253)
chr2 (1-109)||(23290455-23290564)
chr2 (155-208)||(25036543-25036595)
chr2 (155-208)||(25040650-25040702)
chr2 (27-109)||(28971908-28971992)
chr2 (1-94)||(17593077-17593171)
chr2 (133-183)||(2386444-2386494)
chr2 (175-208)||(2386407-2386440)
chr2 (145-208)||(2105248-2105312)
chr2 (85-172)||(19035052-19035140)
chr2 (176-208)||(22013597-22013629)
chr2 (89-171)||(26883729-26883813)
chr2 (176-208)||(40585087-40585119)
chr2 (130-208)||(8890424-8890506)
chr2 (28-109)||(21906784-21906865)
chr2 (130-172)||(22859953-22859995)
chr2 (149-208)||(9162-9222)
chr2 (175-208)||(33663-33696)
chr2 (175-208)||(24427326-24427359)
chr2 (179-208)||(24482141-24482170)
chr2 (149-208)||(29280581-29280642)
chr2 (49-77)||(35244628-35244656)
[»] chr7 (45 HSPs)
chr7 (1-208)||(12460969-12461181)
chr7 (1-208)||(30272248-30272467)
chr7 (89-208)||(15454926-15455044)
chr7 (89-208)||(19438847-19438965)
chr7 (89-172)||(15811631-15811714)
chr7 (1-208)||(16188200-16188413)
chr7 (48-123)||(18959040-18959115)
chr7 (155-208)||(10305600-10305653)
chr7 (155-208)||(10305875-10305928)
chr7 (1-172)||(46349235-46349410)
chr7 (149-205)||(46173899-46173958)
chr7 (48-104)||(3902-3958)
chr7 (119-183)||(23518376-23518440)
chr7 (48-123)||(37244918-37244992)
chr7 (28-172)||(82569-82715)
chr7 (29-176)||(13677816-13677970)
chr7 (28-172)||(15098442-15098590)
chr7 (69-172)||(15438098-15438198)
chr7 (133-183)||(21756897-21756947)
chr7 (133-183)||(26090517-26090567)
chr7 (134-183)||(37379489-37379538)
chr7 (176-208)||(2026760-2026792)
chr7 (22-208)||(14946280-14946466)
chr7 (97-172)||(15104828-15104904)
chr7 (22-208)||(15373873-15374059)
chr7 (1-179)||(16185121-16185300)
chr7 (145-208)||(11395142-11395208)
chr7 (177-208)||(49149517-49149548)
chr7 (145-208)||(11395564-11395628)
chr7 (133-183)||(13454318-13454367)
chr7 (130-172)||(14179491-14179533)
chr7 (178-208)||(16844389-16844419)
chr7 (133-183)||(17468823-17468873)
chr7 (133-183)||(17584341-17584391)
chr7 (81-170)||(36306586-36306676)
chr7 (175-208)||(642161-642194)
chr7 (175-208)||(2438498-2438531)
chr7 (8-179)||(10308475-10308647)
chr7 (175-208)||(13454281-13454314)
chr7 (145-208)||(19599516-19599580)
chr7 (175-208)||(37284822-37284855)
chr7 (147-208)||(11384288-11384350)
chr7 (147-208)||(16675855-16675918)
chr7 (147-208)||(17650092-17650155)
chr7 (176-208)||(20020202-20020234)
[»] chr8 (41 HSPs)
chr8 (1-208)||(43686835-43687051)
chr8 (1-183)||(29299596-29299779)
chr8 (1-183)||(29306142-29306325)
chr8 (23-171)||(20840408-20840559)
chr8 (1-205)||(21300622-21300834)
chr8 (155-208)||(23824651-23824704)
chr8 (89-172)||(19988673-19988756)
chr8 (55-208)||(14595213-14595367)
chr8 (137-208)||(27889504-27889580)
chr8 (28-172)||(36446237-36446387)
chr8 (48-123)||(31412839-31412914)
chr8 (48-123)||(31419278-31419353)
chr8 (28-172)||(21686600-21686752)
chr8 (28-172)||(21690924-21691076)
chr8 (149-208)||(29327790-29327852)
chr8 (1-179)||(34949689-34949868)
chr8 (120-208)||(10606565-10606657)
chr8 (8-80)||(22989095-22989167)
chr8 (137-208)||(27948162-27948238)
chr8 (1-109)||(20784418-20784527)
chr8 (1-95)||(14417165-14417263)
chr8 (133-183)||(16259153-16259203)
chr8 (133-183)||(16267397-16267447)
chr8 (133-183)||(23116769-23116819)
chr8 (175-208)||(14747004-14747037)
chr8 (1-208)||(36601150-36601361)
chr8 (176-208)||(6587737-6587769)
chr8 (89-208)||(11252347-11252467)
chr8 (1-60)||(8415528-8415587)
chr8 (130-208)||(20005985-20006067)
chr8 (149-208)||(28853100-28853162)
chr8 (1-60)||(44430901-44430960)
chr8 (28-95)||(5239555-5239624)
chr8 (145-208)||(22177258-22177322)
chr8 (176-209)||(25702041-25702074)
chr8 (175-208)||(26486504-26486537)
chr8 (176-208)||(3697240-3697272)
chr8 (49-77)||(6587601-6587629)
chr8 (176-208)||(7004581-7004613)
chr8 (146-208)||(22049874-22049937)
chr8 (176-208)||(27345327-27345359)
[»] scaffold0191 (1 HSPs)
scaffold0191 (1-209)||(6324-6537)
[»] scaffold1517 (1 HSPs)
scaffold1517 (1-183)||(359-540)
[»] chr1 (35 HSPs)
chr1 (89-208)||(49327568-49327686)
chr1 (1-108)||(21732218-21732326)
chr1 (48-162)||(24109553-24109666)
chr1 (1-208)||(20032440-20032651)
chr1 (155-208)||(21541548-21541601)
chr1 (80-172)||(16884024-16884116)
chr1 (80-172)||(20942340-20942432)
chr1 (3-179)||(11944601-11944777)
chr1 (1-172)||(19667218-19667393)
chr1 (1-172)||(19852550-19852725)
chr1 (1-172)||(23196061-23196237)
chr1 (28-172)||(21411173-21411322)
chr1 (133-183)||(37674895-37674945)
chr1 (133-183)||(37681588-37681638)
chr1 (118-208)||(43631256-43631349)
chr1 (130-208)||(20848676-20848755)
chr1 (1-172)||(19858685-19858860)
chr1 (16-77)||(21948891-21948954)
chr1 (16-77)||(21962452-21962515)
chr1 (176-208)||(42625821-42625853)
chr1 (1-60)||(2341612-2341671)
chr1 (54-108)||(12237830-12237884)
chr1 (133-183)||(36917337-36917387)
chr1 (147-208)||(41110476-41110539)
chr1 (131-208)||(15316953-15317033)
chr1 (175-208)||(24849711-24849744)
chr1 (175-208)||(28556974-28557007)
chr1 (175-208)||(29597326-29597359)
chr1 (149-208)||(16669749-16669809)
chr1 (176-208)||(20292286-20292318)
chr1 (147-208)||(21732369-21732431)
chr1 (1-80)||(29555014-29555094)
chr1 (180-208)||(37681647-37681675)
chr1 (49-77)||(42625685-42625713)
chr1 (176-208)||(52990333-52990365)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-171)||(8513-8684)
scaffold0243 (1-75)||(23100-23175)
[»] scaffold0010 (4 HSPs)
scaffold0010 (1-171)||(49667-49839)
scaffold0010 (1-171)||(57200-57372)
scaffold0010 (1-171)||(38073-38245)
scaffold0010 (155-208)||(179550-179604)
[»] chr4 (45 HSPs)
chr4 (133-208)||(42220011-42220085)
chr4 (49-208)||(30873376-30873536)
chr4 (1-109)||(14556628-14556737)
chr4 (130-208)||(14508360-14508438)
chr4 (155-208)||(2973205-2973258)
chr4 (133-208)||(20888900-20888981)
chr4 (1-208)||(14062438-14062646)
chr4 (1-208)||(41529524-41529732)
chr4 (133-208)||(20894519-20894600)
chr4 (3-179)||(37839487-37839663)
chr4 (155-208)||(30395746-30395798)
chr4 (28-172)||(16484143-16484291)
chr4 (133-183)||(11202961-11203011)
chr4 (133-183)||(11209116-11209166)
chr4 (133-183)||(11936609-11936659)
chr4 (133-183)||(35463141-35463191)
chr4 (175-208)||(1583471-1583504)
chr4 (148-208)||(42598184-42598247)
chr4 (130-173)||(13900113-13900156)
chr4 (130-208)||(12931491-12931572)
chr4 (54-108)||(15243661-15243715)
chr4 (89-171)||(15406519-15406601)
chr4 (133-183)||(19128859-19128909)
chr4 (130-208)||(20939918-20939995)
chr4 (49-95)||(21881038-21881084)
chr4 (16-95)||(45143163-45143244)
chr4 (16-95)||(45151932-45152013)
chr4 (1-77)||(2973333-2973413)
chr4 (175-208)||(5938487-5938520)
chr4 (73-162)||(10977489-10977578)
chr4 (145-208)||(16750543-16750607)
chr4 (175-208)||(19128825-19128858)
chr4 (175-208)||(21396376-21396409)
chr4 (145-208)||(23121271-23121335)
chr4 (179-208)||(29455905-29455934)
chr4 (175-208)||(33198682-33198715)
chr4 (176-208)||(13481354-13481386)
chr4 (176-208)||(15471100-15471132)
chr4 (130-162)||(15546206-15546238)
chr4 (1-80)||(16220756-16220836)
chr4 (176-208)||(23436480-23436512)
chr4 (150-208)||(27904890-27904949)
chr4 (176-208)||(34771795-34771827)
chr4 (176-208)||(36036410-36036442)
chr4 (176-208)||(43251716-43251748)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-171)||(369939-370111)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-108)||(7218-7326)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-208)||(5034-5248)
[»] scaffold0298 (2 HSPs)
scaffold0298 (28-173)||(14094-14245)
scaffold0298 (28-173)||(17864-18015)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-171)||(39209-39381)
[»] scaffold0316 (1 HSPs)
scaffold0316 (27-109)||(90-174)
[»] scaffold0104 (2 HSPs)
scaffold0104 (155-208)||(19769-19822)
scaffold0104 (155-208)||(22589-22642)
[»] scaffold0947 (1 HSPs)
scaffold0947 (28-172)||(299-449)
[»] scaffold0077 (2 HSPs)
scaffold0077 (80-172)||(18648-18740)
scaffold0077 (80-172)||(24274-24366)
[»] scaffold0031 (1 HSPs)
scaffold0031 (133-208)||(74636-74716)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-172)||(146525-146700)
scaffold0011 (80-172)||(197922-198014)
scaffold0011 (1-81)||(251403-251484)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-179)||(57708-57891)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-179)||(140742-140925)
scaffold0017 (55-208)||(3148-3302)
[»] scaffold1311 (1 HSPs)
scaffold1311 (130-208)||(1964-2042)
[»] scaffold0355 (1 HSPs)
scaffold0355 (130-208)||(1991-2069)
[»] scaffold0113 (3 HSPs)
scaffold0113 (1-172)||(27261-27437)
scaffold0113 (133-180)||(14738-14785)
scaffold0113 (133-183)||(18748-18798)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-208)||(55439-55647)
[»] scaffold0106 (2 HSPs)
scaffold0106 (80-172)||(47241-47333)
scaffold0106 (129-173)||(35821-35865)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-171)||(7759-7931)
[»] scaffold0098 (1 HSPs)
scaffold0098 (8-208)||(33664-33868)
[»] scaffold0516 (1 HSPs)
scaffold0516 (155-208)||(8482-8534)
[»] scaffold0188 (1 HSPs)
scaffold0188 (48-109)||(32173-32234)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-109)||(321-429)
[»] scaffold0124 (1 HSPs)
scaffold0124 (28-109)||(15341-15424)
[»] scaffold0037 (3 HSPs)
scaffold0037 (137-208)||(102166-102242)
scaffold0037 (118-208)||(37445-37538)
scaffold0037 (130-209)||(43008-43090)
[»] scaffold0026 (1 HSPs)
scaffold0026 (55-172)||(28416-28531)
[»] scaffold0679 (1 HSPs)
scaffold0679 (3-179)||(3589-3765)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-108)||(39248-39357)
scaffold0022 (1-108)||(137308-137417)
scaffold0022 (176-208)||(103899-103931)
[»] scaffold0661 (1 HSPs)
scaffold0661 (85-172)||(4584-4672)
[»] scaffold0324 (1 HSPs)
scaffold0324 (55-172)||(7623-7738)
[»] scaffold0028 (1 HSPs)
scaffold0028 (69-172)||(64523-64627)
[»] scaffold0065 (1 HSPs)
scaffold0065 (89-208)||(28222-28341)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-95)||(1456-1554)
[»] scaffold0301 (2 HSPs)
scaffold0301 (130-208)||(2858-2939)
scaffold0301 (8-80)||(13987-14059)
[»] scaffold0205 (1 HSPs)
scaffold0205 (130-208)||(23977-24058)
[»] scaffold0001 (5 HSPs)
scaffold0001 (89-208)||(494436-494558)
scaffold0001 (147-208)||(175015-175078)
scaffold0001 (147-208)||(488790-488852)
scaffold0001 (176-208)||(513050-513082)
scaffold0001 (176-208)||(519467-519499)
[»] scaffold0310 (2 HSPs)
scaffold0310 (175-208)||(12522-12555)
scaffold0310 (175-208)||(7333-7366)
[»] scaffold0156 (1 HSPs)
scaffold0156 (131-204)||(25239-25315)
[»] scaffold0114 (2 HSPs)
scaffold0114 (145-208)||(25920-25984)
scaffold0114 (145-208)||(41602-41666)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-80)||(2913-2993)
scaffold0203 (1-80)||(17669-17749)
[»] scaffold0025 (2 HSPs)
scaffold0025 (55-208)||(76292-76446)
scaffold0025 (89-208)||(15906-16026)
[»] scaffold0004 (1 HSPs)
scaffold0004 (130-208)||(115380-115463)
[»] scaffold1555 (1 HSPs)
scaffold1555 (145-208)||(108-174)
[»] scaffold0811 (1 HSPs)
scaffold0811 (130-208)||(406-485)
[»] scaffold0556 (1 HSPs)
scaffold0556 (69-172)||(5443-5550)
[»] scaffold0334 (1 HSPs)
scaffold0334 (130-205)||(8126-8204)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-60)||(1391-1450)
[»] scaffold1684 (1 HSPs)
scaffold1684 (89-171)||(1095-1177)
[»] scaffold1433 (1 HSPs)
scaffold1433 (73-151)||(92-170)
[»] scaffold0827 (1 HSPs)
scaffold0827 (130-172)||(1395-1437)
[»] scaffold0211 (1 HSPs)
scaffold0211 (130-172)||(8981-9023)
[»] scaffold0078 (1 HSPs)
scaffold0078 (130-172)||(17913-17955)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-59)||(136900-136958)
[»] scaffold0343 (1 HSPs)
scaffold0343 (149-208)||(613-673)
[»] scaffold0239 (1 HSPs)
scaffold0239 (145-208)||(8500-8564)
[»] scaffold0068 (2 HSPs)
scaffold0068 (175-208)||(65807-65840)
scaffold0068 (133-182)||(65848-65897)
[»] scaffold0053 (1 HSPs)
scaffold0053 (145-208)||(63334-63398)
[»] scaffold1752 (1 HSPs)
scaffold1752 (176-208)||(80-112)
[»] scaffold1426 (2 HSPs)
scaffold1426 (176-208)||(337-369)
scaffold1426 (49-77)||(476-504)
[»] scaffold0720 (1 HSPs)
scaffold0720 (89-171)||(4685-4769)
[»] scaffold0279 (1 HSPs)
scaffold0279 (176-208)||(6228-6260)
[»] scaffold0266 (1 HSPs)
scaffold0266 (49-77)||(14579-14607)
[»] scaffold0167 (1 HSPs)
scaffold0167 (130-162)||(10871-10903)
[»] scaffold0154 (1 HSPs)
scaffold0154 (145-208)||(29412-29475)
[»] scaffold0139 (1 HSPs)
scaffold0139 (29-109)||(16606-16689)
[»] scaffold0103 (1 HSPs)
scaffold0103 (176-208)||(24323-24355)
[»] scaffold0081 (1 HSPs)
scaffold0081 (130-162)||(56444-56476)
[»] scaffold0058 (1 HSPs)
scaffold0058 (49-109)||(41031-41091)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-115)||(103481-103568)


Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 23077006 - 23076799
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23077006 aacatctttcctaaacttcaataattatgcagcggaatatttgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 23076907  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatca 200  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23076906 ctcatcaaagaaatctaaacaaccacagggctacattatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatca 23076807  T
Q  201 gagcccta 208  Q
    ||||||||    
T  23076806 gagcccta 23076799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 23082453 - 23082246
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23082453 aacatctttcctaaacttcaataattatgcagcggaatatttgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcaaagaagc 23082354  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatca 200  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  23082353 ctcatcaaagaaatctaaacaaccacaggactacatcatcatgtttcaaaaattggtacataggaaagaaaaacaataataattcccatcccacgtatca 23082254  T
Q  201 gagcccta 208  Q
    || |||||    
T  23082253 gaccccta 23082246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 208
Target Start/End: Complemental strand, 39609558 - 39609378
Alignment:
Q  28 tgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccac 126  Q
    |||||||||||| ||||||| |||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||     
T  39609558 tgcagcggaatatttgcatttaaacaacaatgacaacggttaaattctccatcaaattatcctggcataaaagcctcatcaaagaaatctaaacaatcat 39609459  T
Q  127 agagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    || || ||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  39609458 agggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagaaatctcatcccacgtatcagagcccta 39609378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 24057071 - 24057252
Alignment:
Q  28 tgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacca 125  Q
    |||||||||||| |||||||  |||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||    
T  24057071 tgcagcggaatatttgcatttaaaacaacaacgacaacggttaaattctccatcaaattatcctggcataaaagcctcatcaaagaaatctaaacaatca 24057170  T
Q  126 cagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
     || || ||||||||||||| |||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||    
T  24057171 tagggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagaaatcccatcccacgtatcagagcccta 24057252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26649839 - 26650050
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  26649839 aacatctttcataaacttcaataattatgcagcggaatatttgcatttaaacaacaacaacaacggttaaattctccatcaaattatcctggcataaaag 26649938  T
Q  100 cctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac-------aataataattctcatccc 192  Q
     ||| |||||||||||  ||||| || || || ||||||||| ||| ||||||||||||||||||||||||||||       ||||||||||||||||||    
T  26649939 tctcctcaaagaaatc-caacaatcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaaacaataataaataataattctcatccc 26650037  T
Q  193 acgtatcagagcc 205  Q
    |||||||||||||    
T  26650038 acgtatcagagcc 26650050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26921424 - 26921635
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  26921424 aacatctttcataaacttcaataattatgcagcggaatatttgcatttaaacaacaacaacaacggttaaattctccatcaaattatcctggcataaaag 26921523  T
Q  100 cctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac-------aataataattctcatccc 192  Q
     ||| |||||||||||  ||||| || || || ||||||||| ||| ||||||||||||||||||||||||||||       ||||||||||||||||||    
T  26921524 tctcctcaaagaaatc-caacaatcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaaacaataataaataataattctcatccc 26921622  T
Q  193 acgtatcagagcc 205  Q
    |||||||||||||    
T  26921623 acgtatcagagcc 26921635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 25419314 - 25419475
Alignment:
Q  46 ttaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtt 145  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || || || |||||||||||||    
T  25419314 ttaaacaacaacgacaatggttaaattctccatcaaattatcctggcataaaagcctcatcaaagaaatctaaacaatcatagggccacatcatcatgtt 25419413  T
Q  146 tcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
     |||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||    
T  25419414 ccaaaaattgatacataggaaag-aaaacaataagaaatcccatcccacgtatcagagcccta 25419475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 5342342 - 5342224
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| |||||||||||||||||||||||||| || || || ||||||||||||| |||||||||||||||||||||| |||||||||| |  || ||    
T  5342342 tggcataaaagcctcatcaaagaaatctaaacaatcatagggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagacatccca 5342244  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||    
T  5342243 tcccacgtatcagagcccta 5342224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 21676067 - 21676014
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21676067 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 21676014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 27636229 - 27636169
Alignment:
Q  49 aacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  27636229 aacaacaacaacaactgtttaattctccataaaattatcctggcataaaagcctcatcaaa 27636169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 42242222 - 42242160
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataat---aattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  42242222 aaaattgatacataggaaagaaaaacaataataaaaattctcatcccacgtatcagagcccta 42242160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 22759704 - 22759652
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22759704 gatacataggaaagaaaa-caataataattctcatcccacgtatcagagcccta 22759652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 6405060 - 6404976
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaa 173  Q
    ||||||| ||| ||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| ||||||    
T  6405060 tggcataaaagtctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaaa 6404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 28260453 - 28260377
Alignment:
Q  137 catcatgtttcaaaaattgatacataggaaagaaaa-----acaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| ||| ||||||||||||||||||||||||||     | |||||||||||||||||||| |||||||||||||    
T  28260453 catcaagttccaaaaattgatacataggaaagaaaacaatcataataataattctcatcccacatatcagagcccta 28260377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 19075496 - 19075704
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| ||||  || || |||||||||    ||| ||||||| |||||    
T  19075496 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 19075594  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgta 197  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || || ||||||  |||||    
T  19075595 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgta 19075693  T
Q  198 tcagagcccta 208  Q
    |||||||||||    
T  19075694 tcagagcccta 19075704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 208
Target Start/End: Complemental strand, 31253682 - 31253474
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||||||||  || || ||||| |||    ||| ||||||| |||||    
T  31253682 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacaacaactatttaaatctccgtaattaaatcttggcataaaagcc 31253584  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgta 197  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || || ||||||  |||||    
T  31253583 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgta 31253485  T
Q  198 tcagagcccta 208  Q
    |||||||||||    
T  31253484 tcagagcccta 31253474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 7774237 - 7774187
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  7774237 acatcatcaagttccaaaaattgatacataggaaggaaaaacaataataat 7774187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 23433443 - 23433328
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaat 153  Q
    |||| |||| ||| |||||||||||||| |||  ||||||  |||||||||||||| |||  ||||||| | | | ||||||||| |||||| |||||||    
T  23433443 aacatcaactgtttaattctccataaaaatat--tggcatgaaagcctcatcaaagtaattcaaacaacaataagggctacatcagcatgttccaaaaat 23433346  T
Q  154 tgatacataggaaagaaa 171  Q
    ||||||||||||| ||||    
T  23433345 tgatacataggaatgaaa 23433328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 23444808 - 23444693
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaat 153  Q
    |||| |||| ||| |||||||||||||| |||  ||||||  |||||||||||||| |||  ||||||| | | | ||||||||| |||||| |||||||    
T  23444808 aacatcaactgtttaattctccataaaaatat--tggcatgaaagcctcatcaaagtaattcaaacaacaataagggctacatcagcatgttccaaaaat 23444711  T
Q  154 tgatacataggaaagaaa 171  Q
    ||||||||||||| ||||    
T  23444710 tgatacataggaatgaaa 23444693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 208
Target Start/End: Complemental strand, 18409670 - 18409480
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaat----ctaaaca 121  Q
    |||||||||||| |||||| |||  ||||||||| ||| ||| |||||||||| ||| |||| ||||||| |||||||||||||  |||      || ||    
T  18409670 tgcagcggaatatttgcatcaaaaacaacaacaataaccgtttaattctccatgaaa-tatcttggcataaaagcctcatcaaaataattccaacaatca 18409572  T
Q  122 accacagagctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaac-aataa-taattctcatccc--acgtatcagagcccta 208  Q
    | || || ||||||||| || ||| ||||||||||||||| ||||| ||||||| |||||  ||||||||||||  ||||||||||||||||    
T  18409571 agcatagggctacatcagcaagttccaaaaattgatacataaggaatgaaaaacaaataagaaattctcatcccgtacgtatcagagcccta 18409480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 21661899 - 21661981
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| |||||||||| |||| ||| ||||||| |||||||||||||    
T  21661899 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccat-aaataatcttggcataaaagcctcatcaaa 21661981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 6728910 - 6728699
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || |||||||||    ||| ||||||| |||    
T  6728910 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaag 6728811  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttc---aaaaattgatacataggaaagaa--aaacaataataattctcatccca 193  Q
     || ||||| | |||| | |||||||| || ||||||||| ||   |||   ||||||||||||||||||| |||   |||| ||  || ||||||||||    
T  6728810 tcttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaaaaattgatacataggaatgaaggtaacatta--aaatctcatccca 6728714  T
Q  194 cgtatcagagcccta 208  Q
    |||||||||||||||    
T  6728713 cgtatcagagcccta 6728699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 33535857 - 33535907
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  33535857 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 33535907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 19507644 - 19507677
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  19507644 aataataattctcatcccacgtatcagagcccta 19507677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 37565658 - 37565691
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  37565658 aataataattctcatcccacgtatcagagcccta 37565691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 43244366 - 43244203
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaa-agaaatctaaacaaccacagagctacatcatcatgttt 146  Q
    ||||||||||| |||| ||| || |||||||||    ||| ||||||| |||||| ||||| | |||| | |||||||| || ||||| ||| ||   ||    
T  43244366 aaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaagccttatcaacataaat-tcaacaaccatagggctacgtcagcaatatt 43244268  T
Q  147 caaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||||||||||  || |||||||||  ||||||||||||||||    
T  43244267 caaaacttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagagcccta 43244203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 208
Target Start/End: Original strand, 596842 - 596873
Alignment:
Q  177 taataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||    
T  596842 taataattctcatcccacgtatcagagcccta 596873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 16775757 - 16775691
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatta-----aacaacaacaacaacggttaaattctcca 77  Q
    |||||| ||||||||||||||||  |||||||      |||||||||||||||||||||||||||||    
T  16775757 cttcaacaattatgcagcggaatgtttgcatttcaaataacaacaacaacaacggttaaattctcca 16775691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 23562134 - 23562053
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatac-ataggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| || ||| ||||||||||||| | ||||| |||||||||||| || || ||||||  ||||||||||||||||    
T  23562134 gctacatcagcaagttccaaaaattgatacaaaaggaatgaaaaacaataagaaatcccatcccgtacgtatcagagcccta 23562053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 19235487 - 19235547
Alignment:
Q  149 aaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  19235487 aaaattgatacataggaaagaattcaaacaata--aaatcccatcccacgtatcagagcccta 19235547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 20340147 - 20340180
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||| ||||||||||||||    
T  20340147 aataataattctcatcccatgtatcagagcccta 20340180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 20346750 - 20346783
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  20346750 aataataattcccatcccacgtatcagagcccta 20346783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 20989807 - 20989851
Alignment:
Q  51 caacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    ||||||||||||||||||||||||||| || | |||| |||||||    
T  20989807 caacaacaacaacggttaaattctccaaaacaatatcttggcata 20989851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 22500417 - 22500445
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  22500417 aacaacaacaacaacggttaaattctcca 22500445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 22506995 - 22507023
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  22506995 aacaacaacaacaacggttaaattctcca 22507023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 22507131 - 22507163
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  22507131 ataataattcccatcccacgtatcagagcccta 22507163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 28890895 - 28890835
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    ||||||||  || ||||||||||||||||||||||    
T  28890895 aaaattgatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28890835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 28910799 - 28910739
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    ||||||||  || ||||||||||||||||||||||    
T  28910799 aaaattgatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 28926067 - 28926007
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    ||||||||  || ||||||||||||||||||||||    
T  28926067 aaaattgatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28926007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 28932490 - 28932430
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    ||||||||  || ||||||||||||||||||||||    
T  28932490 aaaattgatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28932430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 28947194 - 28947134
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    ||||||||  || ||||||||||||||||||||||    
T  28947194 aaaattgatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28947134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 143405 - 143610
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||| || ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  143405 aacatctttcataaacttcaataattatgcagcgaaatatttgcattaaacagcaacaacaacggttaaattctccataaaatgatcctggcatagaagc 143504  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatca 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  143505 ctcatcaaagaaatctaaacaaccacagggctacatcatcatgtttcaaaaattgatacattggaaagaaaaacaataataattcccatcccaggtatca 143604  T
Q  201 gagccc 206  Q
    ||||||    
T  143605 gagccc 143610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 17208456 - 17208242
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  17208456 aacatctttcataaacttcaataattatgcagcggaatatttgcattcaaacaacaacaacaacggttaaattctccatcaaattatcctggcataaaag 17208357  T
Q  100 cctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa------taattctcatccca 193  Q
    ||||||||||||||||||||||| || || || ||||||||| ||| |||||||||||||||||||||||||||||||||      ||||||||||||||    
T  17208356 cctcatcaaagaaatctaaacaatcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaaacaataataataataattctcatccca 17208257  T
Q  194 cgtatcagagcccta 208  Q
    |||||||||||||||    
T  17208256 cgtatcagagcccta 17208242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 29925158 - 29925365
Alignment:
Q  4 atctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcct 102  Q
    |||||||| || |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  29925158 atctttcataaacttcaataattatgcagcggaatatttgcatttaaacaataacaacaacggttaaattctccatcaaattatcctggcataaaagcct 29925257  T
Q  103 catcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac---aataataattctcatcccacgtatc 199  Q
    |||||||||||||||||||| || || || |||||| || | | ||||||||||||||||||| ||||||||   ||||||||||| ||||||||| |||    
T  29925258 catcaaagaaatctaaacaatcatagggccacatcaacaag-tccaaaaattgatacataggacagaaaaacaataataataattcccatcccacgcatc 29925356  T
Q  200 agagcccta 208  Q
    |||||||||    
T  29925357 agagcccta 29925365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 13939903 - 13940084
Alignment:
Q  28 tgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacca 125  Q
    ||||||||||||  ||||||  |||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||  ||    
T  13939903 tgcagcggaatatatgcattttaaacaacaacgacaacggttaaattctccatcaaattattctggcataaaagcctcatcaaagaaatctaaacagtca 13940002  T
Q  126 cagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
     || || ||||||||||||| |||||||||||||||||||||| ||| |||||| || || ||||||||||||||||||||||    
T  13940003 tagggccacatcatcatgttccaaaaattgatacataggaaag-aaatcaataagaaatcccatcccacgtatcagagcccta 13940084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 10464914 - 10464702
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||| || |||||| ||||||||||||||||| | |||||||||||| ||| |||| |||||  ||||||| |||||||||||||||| ||||    
T  10464914 aacatctttcataa-cttcaaaaattatgcagcggaatactagcattaaacaactacatcaacagttaatgtctccatcaaattatcctggcatacaagc 10464816  T
Q  101 ctcatcaaagaaatct-aaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa-----aacaataataattctcatcccac 194  Q
    |||||||||| ||| | |||||| || || || ||||||||| ||| |||||||||||||||||||||||||     || ||||||||||||||||||||    
T  10464815 ctcatcaaaggaatttaaaacaatcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaacaataataataataattctcatcccac 10464716  T
Q  195 gtatcagagcccta 208  Q
    ||||||||||||||    
T  10464715 gtatcagagcccta 10464702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 10471436 - 10471224
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||| || |||||| ||||||||||||||||| | |||||||||||| ||| |||| |||||  ||||||| |||||||||||||||| ||||    
T  10471436 aacatctttcataa-cttcaaaaattatgcagcggaatactagcattaaacaactacatcaacagttaatgtctccatcaaattatcctggcatacaagc 10471338  T
Q  101 ctcatcaaagaaatct-aaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa-----aacaataataattctcatcccac 194  Q
    |||||||||| ||| | |||||| || || || ||||||||| ||| |||||||||||||||||||||||||     || ||||||||||||||||||||    
T  10471337 ctcatcaaaggaatttaaaacaatcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaacaataataataataattctcatcccac 10471238  T
Q  195 gtatcagagcccta 208  Q
    ||||||||||||||    
T  10471237 gtatcagagcccta 10471224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 23235615 - 23235531
Alignment:
Q  27 atgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    ||||||||||| | ||||||||||  ||||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||||    
T  23235615 atgcagcggaacatttgcattaaaagcaacaacaacaactgtttaattctccatcaaattatcctggcataaaagcctcatcaaa 23235531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 208
Target Start/End: Complemental strand, 23236026 - 23235841
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcat-agaagcctcatcaaagaaatctaaacaacc 124  Q
    |||||||||||| |||||| |||  ||||||||||||| | | ||||||||||||||| |||||||||| | ||||||||||||| | ||  |||||||     
T  23236026 tgcagcggaatatttgcatcaaaagcaacaacaacaactgattaattctccataaaatcatcctggcataaaaagcctcatcaaa-atattcaaacaaca 23235928  T
Q  125 a-cagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    |  || ||||||||| || ||| |||||||||||||||| | ||  |||||||||| || ||||| |||  ||||||||||||||||    
T  23235927 ataagggctacatcagcaagttccaaaaattgatacataaggaatgaaaacaataagaaatctcaccccgtacgtatcagagcccta 23235841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 2707895 - 2708103
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || |||||||||    ||| ||||||| |||    
T  2707895 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaag 2707994  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa--aaacaataataattctcatcccacgt 196  Q
    ||| ||||| | |||| | |||||||| || ||| ||||| ||   |||||||||||||||||||||| |||   |||| ||  || |||||||||||||    
T  2707995 ccttatcaacataaat-tcaacaaccatagggcttcatcagcaatattcaaaaattgatacataggaatgaaggtaacatta--aaatctcatcccacgt 2708091  T
Q  197 atcagagcccta 208  Q
    ||||||||||||    
T  2708092 atcagagcccta 2708103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 7428858 - 7429062
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc 106  Q
    ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| |||| ||| || |||||||||    ||| ||||||| |||||| |||    
T  7428858 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaagccttatc 7428957  T
Q  107 aa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcaga 202  Q
    || | |||| | |||||||| || ||||| ||| ||   ||||||| |||||||||||||| ||||||||||||  || |||||||||  ||||||||||    
T  7428958 aacataaat-tcaacaaccatagggctacgtcagcaatattcaaaacttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcaga 7429056  T
Q  203 gcccta 208  Q
    ||||||    
T  7429057 gcccta 7429062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 17413541 - 17413682
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacca 125  Q
    |||||||||||| |||||| |||  ||||||||| ||  ||| ||||||||||||||| ||| ||||||| || | ||||||||| |||  ||||||| |    
T  17413541 tgcagcggaatatttgcatcaaaagcaacaacaataattgtttaattctccataaaataatcttggcataaaaacatcatcaaagtaattcaaacaacaa 17413640  T
Q  126 -cagagctacatcatcatgtttcaaaaattgatacataggaa 166  Q
      || ||||||||| |||||| ||||| ||||||||||||||    
T  17413641 taagggctacatcagcatgttccaaaatttgatacataggaa 17413682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19448809 - 19448917
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||||||  | ||||||||||| | |||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||| | ||| ||||||| ||    
T  19448809 aacatctttcatgaacttcaataatt-tacagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaagtaatcttggcataaaa 19448907  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  19448908 gcctcatcaa 19448917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 28707466 - 28707674
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| ||||  || || |||||||||    ||| ||||||| |||||    
T  28707466 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 28707564  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgta 197  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || || ||||||  |||||    
T  28707565 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgta 28707663  T
Q  198 tcagagcccta 208  Q
    |||||||||||    
T  28707664 tcagagcccta 28707674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19467335 - 19467443
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||||||  | ||||||||||| | |||||||||| |||||| |||  ||||||||||||| ||| |||||| |||||| | ||| ||||||| ||    
T  19467335 aacatctttcatgaacttcaataatt-tacagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctacataaagtaatcttggcataaaa 19467433  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  19467434 gcctcatcaa 19467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 22757879 - 22757999
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa---aaacaataataattc 185  Q
    ||||||| |||||||||||| |||||| ||||| | | || |||||| |||||   ||||||| || |||||||||||||||   || |||||  || ||    
T  22757879 tggcataaaagcctcatcaaggaaatccaaacatcaatagggctacaacatcaatattcaaaatttcatacataggaaagaagttaagcaata--aaatc 22757976  T
Q  186 tcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||    
T  22757977 tcatcccacgtatcagagcccta 22757999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 14595316 - 14595145
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc 106  Q
    ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| |||| ||| || |||||||||    ||| ||||||| |||||| |||    
T  14595316 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatcttggcataaaagccttatc 14595217  T
Q  107 aa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaata 178  Q
    || | |||| | |||||||| || ||||| ||| ||   ||||||||||||||||||||||  ||||||||||    
T  14595216 aacataaat-tcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaataaaaaacaata 14595145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 19097293 - 19097243
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  19097293 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 19097243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19450803 - 19450911
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||||||  | ||||||||||| | |||||||||| |||||| |||  ||||| ||||||| ||| |||||| |||||| | ||| ||||||| ||    
T  19450803 aacatctttcatgaacttcaataatt-tacagcggaatatttgcatcaaaagcaacatcaacaactgtttaattcttcataaagtaatcttggcataaaa 19450901  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  19450902 gcctcatcaa 19450911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 24412061 - 24412011
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  24412061 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 24412011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 29158627 - 29158677
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  29158627 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 29158677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 938186 - 938122
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||||||||   |||||||| |  |||||||||||||||||||||||||    
T  938186 ttcaaaatttgatacataggaaagaaattaaacaataaaa--tctcatcccacgtatcagagcccta 938122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 19097239 - 19097206
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  19097239 aataataattctcatcccacgtatcagagcccta 19097206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 19726279 - 19726343
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||||||||   |||||||| |  |||||||||||||||||||||||||    
T  19726279 ttcaaaatttgatacataggaaagaaattaaacaataaaa--tctcatcccacgtatcagagcccta 19726343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 24412007 - 24411974
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  24412007 aataataattctcatcccacgtatcagagcccta 24411974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 27766979 - 27767012
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  27766979 aataataattctcatcccacgtatcagagcccta 27767012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 14996481 - 14996399
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaa--aacaataataattctcatccc--acgtatcagagcccta 208  Q
    |||||||||| ||||| |||||||||||||||||||| ||||  || || || || |||||||||  ||||||||||||||||    
T  14996481 gctacatcattatgttccaaaaattgatacataggaatgaaaataataacaagaaatctcatcccgtacgtatcagagcccta 14996399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 18799051 - 18799113
Alignment:
Q  147 caaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||  |||| ||| ||| ||||||||||||||||||||||||    
T  18799051 caaaatttgatacataggaatgaaagaaacattaaaaat-ctcatcccacgtatcagagcccta 18799113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27766793 - 27766867
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattct 74  Q
    ||||||||||| || |||||| ||| ||||||||||||  |||||||  |||  ||||||||||||||||||||||    
T  27766793 aacatctttcataa-cttcaaaaatcatgcagcggaatgtttgcatttcaaatgacaacaacaacggttaaattct 27766867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 1758 - 1971
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  1758 aacatctttcataaacttcaataattatgcagcggaatatttgcatttaaacaacaacaacaacggttaaattctccatcaaattatcctggcatataag 1857  T
Q  100 cctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaaca------ataataattctcatccca 193  Q
    ||||||||||||||||  ||||| || || |||||||||||| ||| |||||||||||||||||||||||||||||      |||||||||| |||||||    
T  1858 cctcatcaaagaaatc-caacaatcatagggctacatcatcaagttccaaaaattgatacataggaaagaaaaacaataatgataataattcccatccca 1956  T
Q  194 cgtatcagagcccta 208  Q
    |||||||||||||||    
T  1957 cgtatcagagcccta 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 18757691 - 18757486
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    |||| ||||||||| | ||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || |    
T  18757691 aacaactttcaaaa-catcattaattttgcagcggaatatttgcattaaacaacaacgacaacggttaaattctccatcaaattatcctggcataaaaac 18757593  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatca 200  Q
    |||||||||||||||||||||| || || || ||||||| ||||| |||||| ||||||||||||| |||||||||||| || || ||||||||||||||    
T  18757592 ctcatcaaagaaatctaaacaatcatagggccacatcatgatgttccaaaaa-tgatacataggaatgaaaaacaataagaaatcacatcccacgtatca 18757494  T
Q  201 gagcccta 208  Q
    ||||||||    
T  18757493 gagcccta 18757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12725845 - 12725629
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa----caacaacaacaacggttaaattctccataaaattatcctggcatag 96  Q
    ||||||||||| || | |||||||||||||||||||||| ||||||| ||    |||||||||||||||||||||||||||| ||||||||||||||||     
T  12725845 aacatctttcataaacctcaataattatgcagcggaatatttgcatttaaacaacaacaacaacaacggttaaattctccatcaaattatcctggcataa 12725746  T
Q  97 aagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac------aataataattctcatc 190  Q
    |||||||||||| ||||||  ||||| || || || ||||||||| ||| ||||||||||||||||||||||||||||      ||||||||||||||||    
T  12725745 aagcctcatcaaggaaatc-caacaagcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaaacaataataataataattctcatc 12725647  T
Q  191 ccacgtatcagagcccta 208  Q
    ||||||||||||||||||    
T  12725646 ccacgtatcagagcccta 12725629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 10609389 - 10609183
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    |||||||||||||| | ||| ||||| |||| ||||||| ||||||||||||||||| ||||| |||||||| ||||||||| |||| ||||||| ||||    
T  10609389 aacatctttcaaaa-catcattaattttgcaacggaatatttgcattaaacaacaacgacaacagttaaattgtccataaaactatcttggcataaaagc 10609291  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaaca-ataataattctcatcccacgtatc 199  Q
    ||||||||||||||||||||||||| |  |||||||||||||| |||  ||||||||||||||||| |||||| | |||| || || |||||||||||||    
T  10609290 ctcatcaaagaaatctaaacaaccataaggctacatcatcatg-ttcctaaattgatacataggaatgaaaaaaatataagaaatcccatcccacgtatc 10609192  T
Q  200 agagcccta 208  Q
    |||||||||    
T  10609191 agagcccta 10609183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 11965550 - 11965379
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||||||||| | ||| ||    
T  11965550 aacatccttcaaaa-catcattaattttgcagcggaatatttgcattaaaatcaacaacgacaacggtttaattctccataaaattatcctagtataaaa 11965452  T
Q  99 gcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||||||||||||||||| ||||| | || |||||||||||||||| ||||| |||||||||||||| ||||    
T  11965451 gcctcatcaaagaaatctatacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaa 11965379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 32388648 - 32388530
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| |||||||||||||||||||||||||| || || |  ||||||||||||| |||||||||||||||||||||| |||||||||| |  |||||    
T  32388648 tggcataaaagcctcatcaaagaaatctaaacaatcatagggtcacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagacatctca 32388550  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||    
T  32388549 tcccacgtatcagagcccta 32388530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12201842 - 12202018
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||||| ||| ||||||| ||    
T  12201842 aacatccttcaaaaacatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaa 12201940  T
Q  99 gcctcatcaaagaaatctaaacaacc----acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||||||||||  ||  | |||||||    | || ||||||||| |||||| |||||||||||||||||||| |||||    
T  12201941 gcctcatcaaaataaattcaacaaccaaataaagggctacatcaacatgttccaaaaattgatacataggaatgaaaa 12202018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 30597493 - 30597375
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| ||||||| |||||||||||||||||| || || || ||||||||||||| ||||||||||||||| |||||| |||| ||||| |  || ||    
T  30597493 tggcataaaagcctcttcaaagaaatctaaacaaacatagggccacatcatcatgttccaaaaattgatacatgggaaag-aaaataataagacatccca 30597395  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||| ||||||||||||||    
T  30597394 tcccatgtatcagagcccta 30597375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12363209 - 12363100
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || ||||||||| |||||||||||||| |||||| |||  |||||||||||| |||| ||||||||||||| | ||| ||||||| ||    
T  12363209 aacatctttcataaacttcaataaatatgcagcggaatatttgcatcaaaagcaacaacaacaatggtttaattctccataaagtaatcttggcataaaa 12363110  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  12363109 gcctcatcaa 12363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 18136891 - 18136760
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    |||| ||| ||||||| ||||||||||||||||||  ||||||| | ||||||||||||||||||| ||||| |||||||| ||||| |||||  || ||    
T  18136891 aaataatcttggcataaaagcctcatcaaagaaattcaaacaacaatagagctacatcatcatgttccaaaatttgatacacaggaatgaaaataaacaa 18136792  T
Q  180 t-aattctcatccc--acgtatcagagcccta 208  Q
    | || |||||||||  ||||||||||||||||    
T  18136791 taaaatctcatcccgtacgtatcagagcccta 18136760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12356660 - 12356551
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||| || || ||||||||| |||||||||||||| |||||| |||  |||||||||||| |||| ||||||||||||| | ||| ||||||| ||    
T  12356660 aacatcttccataaacttcaataaatatgcagcggaatatttgcatcaaaagcaacaacaacaatggtttaattctccataaagtaatcttggcataaaa 12356561  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  12356560 gcctcatcaa 12356551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 24123843 - 24123790
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24123843 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 24123790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 18130395 - 18130264
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    |||| ||| ||||||| ||||||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||| ||||| |||||  || ||    
T  18130395 aaataatcttggcataaaagcctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacacaggaatgaaaataaacaa 18130296  T
Q  180 t-aattctcatccc--acgtatcagagcccta 208  Q
    | || |||||||||  ||||||||||||||||    
T  18130295 taaaatctcatcccgtacgtatcagagcccta 18130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11306430 - 11306322
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || |||||| |||| |||||||||||| ||||||||||  |||||||||||||  || ||||||||||||||| ||| ||||||| ||    
T  11306430 aacatctttcataaacttcaacaatt-tgcagcggaatatttgcattaaaagcaacaacaacaactatttaattctccataaaataatcttggcataaaa 11306332  T
Q  99 gcctcatcaa 108  Q
    || |||||||    
T  11306331 gcgtcatcaa 11306322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12469567 - 12469459
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || ||||||||||| ||||||||| || ||||||||||  ||||||||||||| ||| |||||||| | |||| ||| ||||||| ||    
T  12469567 aacatctttcataaacttcaataatt-tgcagcggattatttgcattaaaagcaacaacaacaaccgtttaattctccttcaaataatcttggcataaaa 12469469  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  12469468 gcctcatcaa 12469459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 14648918 - 14648714
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc 106  Q
    ||||||||| ||| ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || |||||||||    ||| ||||||| |||||| |||    
T  14648918 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagccttatc 14648819  T
Q  107 aa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcaga 202  Q
    || | |||| | |||||||| || ||||| ||| ||   ||||||| |||||||||||||| ||||||||||||  || |||||||||  ||||||||||    
T  14648818 aacataaat-tcaacaaccatagggctacgtcagcaatattcaaaacttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcaga 14648720  T
Q  203 gcccta 208  Q
    ||||||    
T  14648719 gcccta 14648714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 2249692 - 2249513
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| |||| ||| || |||||||||    ||| ||||||| |||    
T  2249692 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacatcaactgtttaaatctccataattaaatcttggcataaaag 2249593  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    ||| ||||| | |||| | |||||||| || ||||| ||| ||   |||||||||||||||||||||| ||||||||||||    
T  2249592 ccttatcaacataaat-tcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataa 2249513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 11957164 - 11957112
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  11957164 gatacataggaaagaaaa-cattaataattctcatcccacgtatcagagcccta 11957112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 9692119 - 9692035
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatt--aaa---caacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    |||||||||||||||||||||||| |||||||  |||   ||||||||||||||||||||||||||| || | |||| |||||||    
T  9692119 cttcaataattatgcagcggaatatttgcattttaaatagcaacaacaacaacggttaaattctccaaaacaatatcttggcata 9692035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 29550496 - 29550575
Alignment:
Q  137 catcatgtttcaaaaattgatacataggaaagaaaa--------acaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| ||| ||||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||    
T  29550496 catcaagttccaaaaattgatacataggaaagaaaacaataataataataataattctcatcccacgtatcagagcccta 29550575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 16383398 - 16383322
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagccct 207  Q
    ||||||||| |||||| |||||||||||||||||| ||||||   || ||||| || |||||||||||||||||||||    
T  16383398 gctacatcagcatgttccaaaaattgatacatagg-aagaaattaaacaataaatcccatcccacgtatcagagccct 16383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 11645452 - 11645302
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaa--tc-taaacaa 122  Q
    |||||||||||| || ||| |||  ||||||||||||| ||| |||| |||||||| | ||| ||||||| |||||||||||||  ||  || ||| |||    
T  11645452 tgcagcggaatattttcatcaaaagcaacaacaacaactgtttaattttccataaagtaatcttggcataaaagcctcatcaaaataagttcataatcaa 11645353  T
Q  123 ccac-agagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
      || || |||||||||||||||| |||||||||||||||| ||| |||||    
T  11645352 atacaagggctacatcatcatgttccaaaaattgatacataagaatgaaaa 11645302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 5840773 - 5840981
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| ||||||| || | |||||| ||| |||||||| ||||  || || |||||||||    ||| ||||||| |||||    
T  5840773 catccttcaaaatcatcattaattttgcagcgaaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 5840871  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgta 197  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || || ||||||  |||||    
T  5840872 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgta 5840970  T
Q  198 tcagagcccta 208  Q
    |||||||||||    
T  5840971 tcagagcccta 5840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 208
Target Start/End: Complemental strand, 45221434 - 45221226
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||  |||||||||| | |||||| ||| ||||||||||| |  || || |||||||||    ||| ||||||| |||||    
T  45221434 catccttcaaaatcatcattaatgttgcagcggaa-atttgcatcaaaacaacaacaacagctatttaaatctccataattaaatcttggcataaaagcc 45221336  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgta 197  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || |||||||||  || ||    
T  45221335 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacata 45221237  T
Q  198 tcagagcccta 208  Q
    |||||||||||    
T  45221236 tcagagcccta 45221226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2270916 - 2270808
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||||| ||| ||||| |||||||||||| |||||| |||  ||||||||||||| |||  ||||||||||||   ||  ||||||| ||    
T  2270916 aacatccttcaaaatcatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttgattctccataaataaatgttggcataaaa 2270818  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  2270817 gcctcatcaa 2270808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 16832872 - 16832905
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  16832872 aataataattctcatcccacgtatcagagcccta 16832905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16332317 - 16332223
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcat 94  Q
    ||||||||||| || |||||| ||| ||||||||||||  |||| ||  ||| |||||||||||| |||||||||||||||| | |||| ||||||    
T  16332317 aacatctttcataa-cttcaaaaatgatgcagcggaatgtttgcgtttcaaataacaacaacaacagttaaattctccataataatatcttggcat 16332223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 15374137 - 15374221
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatt--aaa---caacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    |||||||| ||||||||||||||| |||||||  |||   |||||||||||||| |||||||||||| || | |||| |||||||    
T  15374137 cttcaatagttatgcagcggaatatttgcattttaaatagcaacaacaacaacgattaaattctccaaaacaatatcttggcata 15374221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 16832815 - 16832862
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataat 180  Q
    ||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  16832815 acatcatcaagttccaaaatttgatacataggaaggaaaaacaataat 16832862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 22163321 - 22163443
Alignment:
Q  89 tggcatagaagcctcatcaaa-gaaatctaaacaaccacagagctacatcatca-tgtttcaaaaattgatacataggaaagaa---aaacaataataat 183  Q
    ||||||| ||||||||||||| |||| | || || ||| || |||||| || || | |||||||||||||||||||||||||||   || |||||  ||     
T  22163321 tggcataaaagcctcatcaaaagaaaccaaatcatccatagggctacaacaacaatatttcaaaaattgatacataggaaagaaattaagcaata--aaa 22163418  T
Q  184 tctcatcccacgtatcagagcccta 208  Q
    || ||||||||||||||||||||||    
T  22163419 tcccatcccacgtatcagagcccta 22163443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 10553545 - 10553603
Alignment:
Q  152 attgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||||||||    
T  10553545 attgatacataggaaagaattcaagcaataaaaat-ctcatcccacgtatcagagcccta 10553603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 14653220 - 14653157
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagccct 207  Q
    ||||||| ||||||||||||||||||   ||||||||  || || |||||||||||||||||||||    
T  14653220 ttcaaaatttgatacataggaaagaaattaaacaata--aaatcccatcccacgtatcagagccct 14653157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 16332137 - 16332105
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  16332137 ataataattcttatcccacgtatcagagcccta 16332105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 17190462 - 17190560
Alignment:
Q  111 aaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||| || || |||||| || ||| || ||||| |||||||||||||| ||||  |||| ||| ||| | ||||||||||||||||||||||    
T  17190462 aaatccaaacaatcatagggctacaacaacattttccaaaatttgatacataggaatgaaagaaacattaaaaatcc-catcccacgtatcagagcccta 17190560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 26008803 - 26008865
Alignment:
Q  147 caaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||  |||| ||| ||| ||||||||||||||||||||||||    
T  26008803 caaaacttgatacataggaatgaaagaaacattaaaaat-ctcatcccacgtatcagagcccta 26008865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 208
Target Start/End: Complemental strand, 32912151 - 32911970
Alignment:
Q  28 tgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacca 125  Q
    |||||||||||| |||||||  |||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||    
T  32912151 tgcagcggaatatttgcatttaaaacaacaacgacaacggttaaattctccatcaaattatcctggcataaaagcctcatcaaagaaatctaaacaatca 32912052  T
Q  126 cagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
     || || ||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||||    
T  32912051 tagggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagaaatctcatcccacgtatcaaagcccta 32911970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 45028052 - 45028170
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| |||||||| ||||||||||||||||| || || || ||||||||||||| |||||||||||||||||||||| |||||||||| || || ||    
T  45028052 tggcataaaagcctcaacaaagaaatctaaacaatcatagggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagaaatccca 45028150  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||    
T  45028151 tcccacgtatcagagcccta 45028170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 22797328 - 22797117
Alignment:
Q  4 atctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||||||| || ||||||||||| |||||||||||| ||| ||||||  ||||||||||||| ||| || |||||||||||| ||| ||||||| |||||    
T  22797328 atctttcataaacttcaataatt-tgcagcggaatatttgaattaaaagcaacaacaacaactgtttaaatctccataaaataatcttggcataaaagcc 22797230  T
Q  102 tcatcaa-agaaatctaaacaacc---acagagctacatcatcatgttt-caaaaattgatacataggaaagaaaaacaataataattctcatccc--ac 194  Q
    ||||||| | |||| | |||||||   | || ||||||||  || |||| |||||||||||||||||||| |||||||||||| || || ||||||  ||    
T  22797229 tcatcaagataaat-ttaacaaccaataaagggctacatccacaagtttccaaaaattgatacataggaatgaaaaacaataagaaatcccatcccgtac 22797131  T
Q  195 gtatcagagcccta 208  Q
    ||||||||||||||    
T  22797130 gtatcagagcccta 22797117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 24651870 - 24652022
Alignment:
Q  22 taattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc-aaagaaatctaa 118  Q
    ||||| |||||||||||| ||||||||||  ||||||| ||||| ||| ||||||||||||||| ||||||||||| |||||||||| ||| ||||  ||    
T  24651870 taattttgcagcggaatatttgcattaaaagcaacaacgacaactgtttaattctccataaaatcatcctggcataaaagcctcatcaaaataaattcaa 24651969  T
Q  119 acaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  24651970 acaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 24652022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 43692985 - 43693038
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43692985 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 43693038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 21133861 - 21133808
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21133861 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 21133808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 27368116 - 27368063
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27368116 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 27368063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 36800155 - 36800208
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36800155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagaacccta 36800208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 25108129 - 25107913
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacg-gttaaattctccataaaattatcctggcataga 97  Q
    |||||| ||||||| | ||| ||||| |||||||||||| |||||| |||  |||||||||||||  ||| ||||||||||||||| ||| ||||||| |    
T  25108129 aacatccttcaaaaacatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacaacaacatgtttaattctccataaaatcatcttggcataaa 25108031  T
Q  98 agcctcatcaaag--aaatc-taaacaaccaca-gagctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaacaataataattctcatccc 192  Q
    ||||| ||||||   || || ||| |||  ||| | ||||||||| || ||| ||||||||||||||| ||||| |||||||||||| || |||||||||    
T  25108030 agccttatcaaaattaattcataatcaaatacaagggctacatcagcaagttccaaaaattgatacataaggaatgaaaaacaataagaaatctcatccc 25107931  T
Q  193 --acgtatcagagcccta 208  Q
      ||||||||||||||||    
T  25107930 gtacgtatcagagcccta 25107913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 23297043 - 23297253
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| |||||||||||| ||||| ||||||||||  |||| || ||||| ||| ||||||||||||||| |||||||| || ||    
T  23297043 aacatccttcaaaa-catcattaattatgcagcagaatatttgcattaaaagcaaccacgacaactgtttaattctccataaaatcatcctggcttaaaa 23297141  T
Q  99 gcctcatc-aaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa--aacaataataattctcatcccacg 195  Q
    |||||||| ||| ||||  ||||||| | || || |||||| ||  || ||||| |||||||||| ||| ||||  || ||| | || || |||||||||    
T  23297142 gcctcatcaaaataaattcaaacaacaatagggcaacatcagcaatttccaaaatttgatacataagaatgaaagtaagaatta-aaatcccatcccacg 23297240  T
Q  196 tatcagagcccta 208  Q
    |||||||||||||    
T  23297241 tatcagagcccta 23297253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23290455 - 23290564
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| |||||||||||| ||||| ||||||||||  |||| || ||||| ||| ||||||||||||||| |||||||| || ||    
T  23290455 aacatccttcaaaa-catcattaattatgcagcagaatatttgcattaaaagcaaccacgacaactgtttaattctccataaaatcatcctggcttaaaa 23290553  T
Q  99 gcctcatcaaa 109  Q
    |||||||||||    
T  23290554 gcctcatcaaa 23290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 25036595 - 25036543
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25036595 gatacataggaaagaaaa-caataataattcccatcccacgtatcagagcccta 25036543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 25040702 - 25040650
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25040702 gatacataggaaagaaaa-caataataattcccatcccacgtatcagagcccta 25040650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 28971992 - 28971908
Alignment:
Q  27 atgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    ||||||| ||| | ||||||||||  ||||||||||||| ||| |||||||||| || ||||||||||||| |||||||||||||    
T  28971992 atgcagcagaacatttgcattaaaagcaacaacaacaactgtttaattctccatcaagttatcctggcataaaagcctcatcaaa 28971908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17593171 - 17593077
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcat 94  Q
    ||||||||||| || |||||| ||| ||||||||||||  |||||||  ||| ||||||||||||| ||||||||||||||| | |||| ||||||    
T  17593171 aacatctttcataa-cttcaaaaatcatgcagcggaatgtttgcatttcaaataacaacaacaacgattaaattctccataataatatcttggcat 17593077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 2386494 - 2386444
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  2386494 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 2386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 2386440 - 2386407
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  2386440 aataataattctcatcccacgtatcagagcccta 2386407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 2105248 - 2105312
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||   ||||||||| ||||| ||||||||||||||||||||||    
T  2105248 ttcaaaatttgatacataggaaagaaattaaacaataa-aattc-catcccacgtatcagagcccta 2105312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 19035052 - 19035140
Alignment:
Q  85 atcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||||  |||||||||||||| |||  ||||||| | | | ||||||||| |||||| ||||||||||| |||||||| |||||    
T  19035052 atcctggcatgaaagcctcatcaaagtaattcaaacaacaataagggctacatcagcatgttccaaaaattgatgcataggaatgaaaa 19035140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 22013629 - 22013597
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||    
T  22013629 ataataattctcatcccacgtatcagagcccta 22013597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 26883729 - 26883813
Alignment:
Q  89 tggcatagaagcctcatcaaa-gaaatctaaacaaccacagagctacatcatca-tgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||||| ||||||||||||| |||| | || || ||| || |||||| || || ||||||||||||||||||||||||||||||    
T  26883729 tggcataaaagcctcatcaaaagaaaccaaatcatccatagggctacaacaacagtgtttcaaaaattgatacataggaaagaaa 26883813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 40585087 - 40585119
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||    
T  40585087 ataataattctcatcccacgtatcagagcccta 40585119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 8890506 - 8890424
Alignment:
Q  130 gctacatcatcatgtttcaaaaa-ttgatacataggaaagaaaaa-caataataattctcatccc--acgtatcagagcccta 208  Q
    |||||||||||| ||| |||||| |||||||||||||| ||||||  ||||| || |||||||||  ||||||||||||||||    
T  8890506 gctacatcatcaagttccaaaaaattgatacataggaatgaaaaataaataagaaatctcatcccgtacgtatcagagcccta 8890424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 21906784 - 21906865
Alignment:
Q  28 tgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    |||||| ||||| |||||| ||| | ||||||| ||||||| ||| |||||||||| |||| ||||||| |||||||||||||    
T  21906784 tgcagcagaatatttgcatcaaaacgacaacaataacggtttaatcctccataaaa-tatcttggcataaaagcctcatcaaa 21906865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 22859953 - 22859995
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  22859953 gctacatcaacatgttccaaaaattgatacataggaatgaaaa 22859995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 9162 - 9222
Alignment:
Q  149 aaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  9162 aaaattgatacataggaaagaattcaaacaata--aaatcccatcccacgtatcagagcccta 9222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 33663 - 33696
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    |||||| |||||||||||||||||||||||||||    
T  33663 aataatgattctcatcccacgtatcagagcccta 33696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 24427359 - 24427326
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  24427359 aataataattcccatcccacgtatcagagcccta 24427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 24482170 - 24482141
Alignment:
Q  179 ataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||    
T  24482170 ataattctcatcccacgtatcagagcccta 24482141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 29280581 - 29280642
Alignment:
Q  149 aaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||   || |||||| || || ||||||||||||||||||||||    
T  29280581 aaaattgatacataggaaagaattcaagcaataa-aaatcccatcccacgtatcagagcccta 29280642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Complemental strand, 35244656 - 35244628
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  35244656 aacaacaacaacaacggttaaattctcca 35244628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 12460969 - 12461181
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||| || |||||| |||||| |||||||||| |||||||||||||| ||| |||| |||||  ||||||| |||||||||||||||| ||||    
T  12460969 aacatctttcataa-cttcaaaaattattcagcggaatacttgcattaaacaactacatcaacagttaatgtctccatcaaattatcctggcatacaagc 12461067  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac------aataataattctcatcccac 194  Q
    |||||||||| ||||||||||| || || || ||||||||| ||||||||||||||||||||||||||||||||      ||||||||||||||||||||    
T  12461068 ctcatcaaaggaatctaaacaatcatagggccacatcatcaagtttcaaaaattgatacataggaaagaaaaacaataataataataattctcatcccac 12461167  T
Q  195 gtatcagagcccta 208  Q
    ||||||||| ||||    
T  12461168 gtatcagagaccta 12461181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 30272467 - 30272248
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-------caacaacaacaacggttaaattctccataaaattatcctggca 93  Q
    ||||||||||| || | |||||||||||||||||||||| ||||||| ||       ||||||||||||||||||||||||||||  |||||||||||||    
T  30272467 aacatctttcataaacctcaataattatgcagcggaatatttgcatttaaacaacaacaacaacaacaacggttaaattctccatctaattatcctggca 30272368  T
Q  94 tagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac------aataataattctc 187  Q
    || ||||||||||||  |||||  ||||| || || || ||||||||| ||| ||||||||||||||||| ||||||||||      |||||||||||||    
T  30272367 taaaagcctcatcaagtaaatc-caacaagcatagggccacatcatcaagttccaaaaattgatacatagaaaagaaaaacaataataataataattctc 30272269  T
Q  188 atcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||    
T  30272268 atcccacgtatcagagcccta 30272248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 15454926 - 15455044
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| |||||||||||||||||||||||||| || || |  ||||||||||||| |||||||||||||||||||||| |||||||||| |  || ||    
T  15454926 tggcataaaagcctcatcaaagaaatctaaacaatcatagggacacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagacatccca 15455024  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||    
T  15455025 tcccacgtatcagagcccta 15455044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 19438847 - 19438965
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| |||||||||||||||||||||||||| || || || ||||||||||||| |||||||||||||||||||||| |||||||||| |  || ||    
T  19438847 tggcataaaagcctcatcaaagaaatctaaacaatcatagggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagacatccca 19438945  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||||||||||||| ||||    
T  19438946 tcccacgtatcagagtccta 19438965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 15811631 - 15811714
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||| |||||||||||||||||||||||||| || || || ||||||||||||| ||||||||||||||||||||||||||    
T  15811631 tggcataaaagcctcatcaaagaaatctaaacaatcatagggccacatcatcatgttccaaaaattgatacataggaaagaaaa 15811714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 16188413 - 16188200
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || ||||||||||| |||||||||||| ||||||||||  |||||||||||||  || |||||||| | |||| ||| ||||||| ||    
T  16188413 aacatctttcataaacttcaataatt-tgcagcggaatatttgcattaaaagcaacaacaacaaccatttaattctccttcaaataatcttggcataaaa 16188315  T
Q  99 gcctcatcaa-agaaatctaaacaacc----acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatccc- 192  Q
    |||||||||| | |||| | |||||||    | || ||||||||  ||  || |||||||||||||||||||| | |||||||||| || |||||||||     
T  16188314 gcctcatcaagataaat-tcaacaaccaaataaagggctacatccacaaattccaaaaattgatacataggaatg-aaaacaataagaaatctcatcccg 16188217  T
Q  193 -acgtatcagagcccta 208  Q
     ||||||||||||||||    
T  16188216 tacgtatcagagcccta 16188200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 18959115 - 18959040
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaac 123  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||    
T  18959115 aaacaacaacaacaactgtttaattctccataaaattatcctggcataaaagcctcatcaaataaattcaaacaac 18959040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 10305600 - 10305653
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10305600 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 10305653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 10305928 - 10305875
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10305928 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 10305875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 46349410 - 46349235
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||||||||||| ||| ||||| |||||||||||| |||||| |||  ||||||| ||||  ||| |||||||||||||   ||| ||||||| ||    
T  46349410 aacatctttcaaaatcatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacgacaattgtttaattctccataaataaatcttggcataaaa 46349312  T
Q  99 gcctcatcaa-agaaatctaaacaacc---acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||||||||| | |||| | |||||||   | || |||||||||| | ||||||||| |||||||||||||| |||||    
T  46349311 gcctcatcaacataaat-tcaacaaccaataaagggctacatcattaagtttcaaaatttgatacataggaatgaaaa 46349235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 46173899 - 46173958
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaata---ataattctcatcccacgtatcagagcc 205  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||    
T  46173899 aaaattgatacataggaaagaaaaacaataaatataattcacatcccacgtatcagagcc 46173958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 3958 - 3902
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctca 104  Q
    ||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||    
T  3958 aaacaacaacaacaactatttaattctccataaaattatcctggcataaaagcctca 3902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 23518376 - 23518440
Alignment:
Q  119 acaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||| || |||| | ||||| ||| |||||||||||||||||||||||||||||||||||||    
T  23518376 acaaccaaagggctataacatcaagttccaaaaattgatacataggaaagaaaaacaataataat 23518440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 37244992 - 37244918
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaac 123  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||    
T  37244992 aaacaacaacaata-ctgtttaattctccataaaattatcctggcataaaagcctcatcaaataaattcaaacaac 37244918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 82715 - 82569
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaa--caacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaac 123  Q
    |||||||||||| || |||||||  |||||||||  |||| ||| ||||||||||||||||   |||||||  |||||||| |||||  ||  |||||||    
T  82715 tgcagcggaatattttcattaaaaacaacaacaaatcaactgtttaattctccataaaatt---ctggcatgaaagcctcaccaaagttattcaaacaac 82619  T
Q  124 caca-gagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
     | | | ||||||||| |||||| |||||||||||||||||||| |||||    
T  82618 aataagggctacatcagcatgttccaaaaattgatacataggaatgaaaa 82569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 13677816 - 13677970
Alignment:
Q  29 gcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc-aaagaaatc---taaacaa 122  Q
    ||||||||||| |||||| |||  ||||||||| ||  ||| ||||||||||||||| ||| ||||||| |||||||||| ||| |||||    || |||    
T  13677816 gcagcggaatatttgcatcaaaagcaacaacaataattgtttaattctccataaaataatcttggcataaaagcctcatcaaaataaatccaacaatcaa 13677915  T
Q  123 ccacagagctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaacaa 176  Q
     || || ||||||||| || ||| ||||||||||||||| ||||| |||||||||    
T  13677916 gcaaagggctacatcagcaagttccaaaaattgatacataaggaatgaaaaacaa 13677970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 15098590 - 15098442
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaa----caacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaaca 121  Q
    |||||||||||| || |||||||  |||||||||    |||| ||| |||||||||||||||   ||| ||||  |||||||||||||| |||  |||||    
T  15098590 tgcagcggaatattttcattaaaaacaacaacaaacatcaactgtttaattctccataaaat---cctagcatgaaagcctcatcaaagtaattcaaaca 15098494  T
Q  122 accaca-gagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    || | | | ||||||||| |||||| |||||||||||||||||||| |||||    
T  15098493 acaataagggctacatcagcatgttccaaaaattgatacataggaatgaaaa 15098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 15438198 - 15438098
Alignment:
Q  69 aattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaag 168  Q
    |||||||||||||||   ||||||||  ||| |||||||||  |||  ||||||| | || ||||||||| |||||| |||||||||||||||||||| |    
T  15438198 aattctccataaaat---cctggcatgaaagtctcatcaaaataattcaaacaacgatagggctacatcagcatgttccaaaaattgatacataggaatg 15438102  T
Q  169 aaaa 172  Q
    ||||    
T  15438101 aaaa 15438098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 21756897 - 21756947
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  21756897 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 21756947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 26090567 - 26090517
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  26090567 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 26090517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 37379489 - 37379538
Alignment:
Q  134 catcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    |||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  37379489 catcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 37379538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 2026792 - 2026760
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||    
T  2026792 ataataattctcatcccacgtatcagagcccta 2026760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 14946466 - 14946280
Alignment:
Q  22 taattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaa-agaaatctaaa 119  Q
    ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || |||| ||||    ||| ||||||| |||||| ||||| | ||||| ||     
T  14946466 taattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctcaataattaaatcttggcataaaagccttatcaacataaatccaa- 14946368  T
Q  120 caaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||| || ||||||||| ||   |||||||||||||||||||| || |||   || | ||| || ||||||||||||||||||||||    
T  14946367 caaccatagggctacatcagcaatattcaaaaattgatacatagg-aataaaggtaacattaaatcccatcccacgtatcagagcccta 14946280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 15104904 - 15104828
Alignment:
Q  97 aagcctcatcaaagaaatctaaacaaccacagag-ctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||||||||||||| |||  ||||||| | | || |||||||| |||||| |||||||||||||||||||| |||||    
T  15104904 aagcctcatcaaagtaattcaaacaacaataaaggctacatcagcatgttccaaaaattgatacataggaatgaaaa 15104828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 15374059 - 15373873
Alignment:
Q  22 taattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaa-agaaatctaaa 119  Q
    ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || |||| ||||    ||| ||||||| |||||| ||||| | ||||| ||     
T  15374059 taattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctcaataattaaatcttggcataaaagccttatcaacataaatccaa- 15373961  T
Q  120 caaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||| || ||||||||| ||   |||||||||||||||||||| || |||   || | ||| || ||||||||||||||||||||||    
T  15373960 caaccatagggctacatcagcaatattcaaaaattgatacatagg-aataaaggtaacattaaatcccatcccacgtatcagagcccta 15373873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 16185121 - 16185300
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||  ||| ||||| |||||||||  | |||||| ||| |||||||| |||| ||| || |||||||||    ||| ||||||| ||     
T  16185121 aacatccttcaaaattatcattaattttgcagcggataatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaa 16185220  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    ||| ||||| | |||| | |||||||| || ||||||||| ||   ||||||||||||||| |||||| ||||||||||||    
T  16185221 ccttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacttaggaatgaaaaacaataa 16185300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 11395208 - 11395142
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    |||||||||||||||||||||| ||||||||||||  || || ||||||  ||||||||||||||||    
T  11395208 ttcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagcccta 11395142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 208
Target Start/End: Original strand, 49149517 - 49149548
Alignment:
Q  177 taataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||    
T  49149517 taataattctcatcccacgtatcagagcccta 49149548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 11395628 - 11395564
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||| ||||  |||| ||| ||| ||||||||||||||||||||||||    
T  11395628 ttcaaaatttgatacataggaatgaaagaaacattaaaaat-ctcatcccacgtatcagagcccta 11395564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 13454367 - 13454318
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  13454367 acatcatca-gttccaaaaattgatacataggaaggaaaaacaacaataat 13454318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 14179533 - 14179491
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  14179533 gctacatcaacatgttccaaaaattgatacataggaatgaaaa 14179491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 16844419 - 16844389
Alignment:
Q  178 aataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||    
T  16844419 aataattctcatcccacgtatcagagcccta 16844389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 17468873 - 17468823
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||| ||||||    
T  17468873 acatcattaagttccaaaaattgatacataggaaggaaaaacaacaataat 17468823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 17584341 - 17584391
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||| ||||||    
T  17584341 acatcattaagttccaaaaattgatacataggaaggaaaaacaacaataat 17584391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 36306676 - 36306586
Alignment:
Q  81 aattatcc-tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa 170  Q
    |||||||| ||||||| |||||||| ||| |||||| ||||| | | || |||||| |||||   ||||||| ||||||||||||||||||    
T  36306676 aattatccatggcataaaagcctcaacaaggaaatccaaacatcaatagggctacaacatcaatattcaaaacttgatacataggaaagaa 36306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 642161 - 642194
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||||||||||    
T  642161 aataatagttctcatcccacgtatcagagcccta 642194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 2438498 - 2438531
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||||||||||    
T  2438498 aataatagttctcatcccacgtatcagagcccta 2438531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 10308647 - 10308475
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc 106  Q
    ||||||||| ||| ||||| |||||| ||| | |||||| ||| |||||||| |||| ||| || | |||||||    ||| ||||||| |||||| |||    
T  10308647 ttcaaaatcatcattaattttgcagcagaaaatttgcatcaaaacaacaacagcaactgtttaaatatccataattaaatcttggcataaaagccttatc 10308548  T
Q  107 aa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    || | |||| | |||||||| || ||||| ||| ||   ||||||| |||||||||||||| ||||||||||||    
T  10308547 aacataaat-tcaacaaccatagggctacgtcagcaatattcaaaacttgatacataggaatgaaaaacaataa 10308475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 13454314 - 13454281
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    |||| |||||||||||||||||||||||||||||    
T  13454314 aatagtaattctcatcccacgtatcagagcccta 13454281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 19599516 - 19599580
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||   |||||  ||||| || ||||||||||||||||||||||    
T  19599516 ttcaaaatttgatacataggaaagaaattaaaca--aataaatcccatcccacgtatcagagcccta 19599580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 37284822 - 37284855
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  37284822 aataataattcccatcccacgtatcagagcccta 37284855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 11384350 - 11384288
Alignment:
Q  147 caaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||  |||| ||| ||| ||||||||||||||||||||||||    
T  11384350 caaaatttgatacataggaatgaaagaaacattaaaaat-ctcatcccacgtatcagagcccta 11384288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 16675855 - 16675918
Alignment:
Q  147 caaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||  |||| ||| || || ||||||||||||||||||||||    
T  16675855 caaaatttgatacataggaatgaaagaaacattaaaaaatcccatcccacgtatcagagcccta 16675918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 17650092 - 17650155
Alignment:
Q  147 caaaaattgatacataggaaagaaa--aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||  |||| ||| || || ||||||||||||||||||||||    
T  17650092 caaaatttgatacataggaatgaaagaaacattaaaaaatcccatcccacgtatcagagcccta 17650155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 20020234 - 20020202
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  20020234 ataataattcccatcccacgtatcagagcccta 20020202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 8e-51; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 43686835 - 43687051
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa----caacaacaacaacggttaaattctccataaaattatcctggcatag 96  Q
    ||||||||||| || | |||||||||||||||||||||| ||||||| ||    |||||||||||||||||||||||||||| ||||||||||||||||     
T  43686835 aacatctttcataaacctcaataattatgcagcggaatatttgcatttaaacaacaacaacaacaacggttaaattctccatcaaattatcctggcataa 43686934  T
Q  97 aagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaac------aataataattctcatc 190  Q
    ||||||||||||  |||||  ||||| || || || ||||||||| ||| ||||||||||||||||||||||||||||      ||||||||||| ||||    
T  43686935 aagcctcatcaagtaaatc-caacaagcatagggccacatcatcaagttccaaaaattgatacataggaaagaaaaacaataataataataattcccatc 43687033  T
Q  191 ccacgtatcagagcccta 208  Q
    ||||||||||||||||||    
T  43687034 ccacgtatcagagcccta 43687051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 29299779 - 29299596
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||  ||||| |||||||||||||| | |||    
T  29299779 aacatctttcatagacttcaataattatgcagcggaatatttgcattcaaacaaaaacaacaacggttaaatcttccattaaattatcctggcacaaaag 29299680  T
Q  100 cctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    |||||| ||||||||  |||||| || || || ||| ||||| ||| ||||||||||||||||||| ||| |||||| ||||||    
T  29299679 cctcattaaagaaattcaaacaatcatagggccacagcatcaagttccaaaaattgatacataggagagagaaacaaaaataat 29299596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 29306325 - 29306142
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt-aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||  ||||| |||||||||||||| | |||    
T  29306325 aacatctttcatagacttcaataattatgcagcggaatatttgcattcaaacaaaaacaacaacggttaaatcttccattaaattatcctggcacaaaag 29306226  T
Q  100 cctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    |||||| ||||||||  |||||| || || || ||| ||||| ||| ||||||||||||||||||| ||| |||||| ||||||    
T  29306225 cctcattaaagaaattcaaacaatcatagggccacagcatcaagttccaaaaattgatacataggagagagaaacaaaaataat 29306142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 20840559 - 20840408
Alignment:
Q  23 aattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc-aaagaaatctaaa 119  Q
    |||| |||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||| ||||||||||| |||||||||| ||| ||||  |||    
T  20840559 aattttgcagcggaatatttgcattaaaagcaacaacgacaacggtttaattctccataaaatcatcctggcataaaagcctcatcaaaataaattcaaa 20840460  T
Q  120 caaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  20840459 caacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 20840408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21300834 - 21300622
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || ||||||| ||| |||||||||||| ||||||||||  ||||||||||||| ||| || || ||||||||| ||| ||||||| ||    
T  21300834 aacatctttcataaacttcaatcatt-tgcagcggaatatttgcattaaaagcaacaacaacaactgtttaaatccccataaaataatcttggcataaaa 21300736  T
Q  99 gcctcatcaa-agaaatctaaacaacc----acagagctacatcatcatgttt-caaaaattgatacataggaaagaaaaacaataataattctcatccc 192  Q
    |||||||||| | |||| | |||||||    | || ||||||||  || |||| |||||||||||||||||||| |||||||||||| || |||||||||    
T  21300735 gcctcatcaagataaat-tcaacaaccaaaaaaagggctacatccacaagtttccaaaaattgatacataggaatgaaaaacaataagaaatctcatccc 21300637  T
Q  193 --acgtatcagagcc 205  Q
      |||||||||||||    
T  21300636 gtacgtatcagagcc 21300622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 23824651 - 23824704
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23824651 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 23824704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 19988756 - 19988673
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||| ||||||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| |||||    
T  19988756 tggcataaaagcctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaa 19988673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 55 - 208
Target Start/End: Complemental strand, 14595367 - 14595213
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaat 153  Q
    |||| |||| ||| ||||||||||||||||   |||||||  |||||||||||||| |||  ||||||| | | | ||||||||| |||||| |||||||    
T  14595367 aacatcaactgtttaattctccataaaatt---ctggcatgaaagcctcatcaaagtaattcaaacaacaataagggctacatcagcatgttccaaaaat 14595271  T
Q  154 tgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    ||||||||||||| |||||  || || ||| |||||||||  ||||||||||||||||    
T  14595270 tgatacataggaatgaaaataaacaagtaaatctcatcccgtacgtatcagagcccta 14595213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 27889504 - 27889580
Alignment:
Q  137 catcatgtttcaaaaattgatacataggaaagaaaa-----acaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| ||| ||||||||||||||||||||||||||     | ||||||||||||||||||||||||||||||||||    
T  27889504 catcaagttccaaaaattgatacataggaaagaaaacaataataataataattctcatcccacgtatcagagcccta 27889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 36446387 - 36446237
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaa--tc-taaacaa 122  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||| | ||| ||||||| || ||||||||||  ||  || ||| |||    
T  36446387 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaagtaatcttggcataaaaacctcatcaaaataagttcataatcaa 36446288  T
Q  123 ccac-agagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
      || || |||||||||||||||| |||||||||||||||||||| |||||    
T  36446287 atacaagggctacatcatcatgttccaaaaattgatacataggaatgaaaa 36446237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 31412914 - 31412839
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaac 123  Q
    |||||||||||| ||| ||| |||||||||||||||||| |||||||| ||||||||||||| ||||  |||||||    
T  31412914 aaacaacaacaataactgtttaattctccataaaattatactggcataaaagcctcatcaaataaattcaaacaac 31412839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 31419353 - 31419278
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaac 123  Q
    |||||||||||| ||| ||| |||||||||||||||||||| |||||| ||||||||||||| ||||  |||||||    
T  31419353 aaacaacaacaataactgtttaattctccataaaattatccaggcataaaagcctcatcaaataaattcaaacaac 31419278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 21686752 - 21686600
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaa----caacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaaca 121  Q
    |||||||||||| || |||||||  |||||||||    |||| ||| ||||||||||||||| ||| ||||||| ||||||||||||| || ||  ||||    
T  21686752 tgcagcggaatattttcattaaaaacaacaacaaacatcaactgtttaattctccataaaataatcttggcataaaagcctcatcaaacaattc--aaca 21686655  T
Q  122 acc----acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||    | || ||||||||| |||||| |||||||||||||||||||| |||||    
T  21686654 accaaataaagggctacatcagcatgttccaaaaattgatacataggaatgaaaa 21686600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 21691076 - 21690924
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaa----caacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaaca 121  Q
    |||||||||||| || |||||||  |||||||||    |||| ||| ||||||||||||||| ||| ||||||| ||||||||||||| || ||  ||||    
T  21691076 tgcagcggaatattttcattaaaaacaacaacaaacatcaactgtttaattctccataaaataatcttggcataaaagcctcatcaaacaattc--aaca 21690979  T
Q  122 acc----acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||    | || ||||||||| |||||| |||||||||||||||||||| |||||    
T  21690978 accaaataaagggctacatcagcatgttccaaaaattgatacataggaatgaaaa 21690924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 29327790 - 29327852
Alignment:
Q  149 aaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||   || ||||||||||| ||||||||||||||||||||||    
T  29327790 aaaattgatacataggaaagaaaagcaataataataattcccatcccacgtatcagagcccta 29327852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 34949689 - 34949868
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| |||| ||| || |||||||||    ||| ||||||| |||    
T  34949689 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaag 34949788  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    ||| ||||| | |||| | |||||||| || | ||| ||| ||   |||||||||||||||||||||| ||||||||||||    
T  34949789 ccttatcaacataaat-tcaacaaccatagggttacgtcaacagtattcaaaaattgatacataggaatgaaaaacaataa 34949868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 10606565 - 10606657
Alignment:
Q  120 caaccacagagctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaacaat-aataattctcatccc--acgtatcagagcccta 208  Q
    |||||| || |||||||||||| ||| ||||||||||||||| ||||| |||||||||| ||||| || ||||||  ||||||||||||||||    
T  10606565 caaccaaagggctacatcatcaagttccaaaaattgatacataaggaatgaaaaacaataaataaatcccatcccgtacgtatcagagcccta 10606657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 22989095 - 22989167
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataa 80  Q
    ||||||||| ||| ||||| |||||||||| | |||||| |||||||||||||||| ||| || |||||||||    
T  22989095 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaacaacaacaacaactgtttaaatctccataa 22989167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 27948162 - 27948238
Alignment:
Q  137 catcatgtttcaaaaattgatacataggaaagaaa-----aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| ||| |||||||||||||||||||||||||     || | ||||||||| ||||||||||||||||||||||    
T  27948162 catcaagttccaaaaattgatacataggaaagaaaacaataatagtaataattcccatcccacgtatcagagcccta 27948238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20784527 - 20784418
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||| ||||||| |||||| |||  ||||||||||||| ||| ||||||||||||||| ||  ||||||| ||    
T  20784527 aacatccttcaaaaacatcattaatt-tgcatcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatattggcataaaa 20784429  T
Q  99 gcctcatcaaa 109  Q
    ||| |||||||    
T  20784428 gccccatcaaa 20784418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14417263 - 14417165
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt--aaa---caacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    ||||||||||| || |||||| ||||||||| ||||||| |||||||  |||   ||||||||||||||||||||||||||| || | |||| |||||||    
T  14417263 aacatctttcataa-cttcaaaaattatgcaacggaatatttgcattttaaatagcaacaacaacaacggttaaattctccaaaacaatatcttggcata 14417165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 16259153 - 16259203
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  16259153 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 16259203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 16267447 - 16267397
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  16267447 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 16267397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 23116769 - 23116819
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  23116769 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 23116819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 14747037 - 14747004
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  14747037 aataataattctcatcccacgtatcagagcccta 14747004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 36601150 - 36601361
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| |||||| || ||| ||||| | |||||||| | |||||| ||| ||||||||||||| ||| || |||||||||    ||| ||||||| ||     
T  36601150 aacatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaaa 36601249  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acg 195  Q
    ||| ||||| | |||| | |||||||| |  ||||| ||| ||   |||||||||||||| ||||||| ||||||||||||  || |||||||||  |||    
T  36601250 ccttatcaacataaat-tcaacaaccatatggctacgtcagcaatattcaaaaattgatatataggaatgaaaaacaataagaaaatctcatcccgtacg 36601348  T
Q  196 tatcagagcccta 208  Q
    |||||||||||||    
T  36601349 tatcagagcccta 36601361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 6587737 - 6587769
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||    
T  6587737 ataataattctcatcccacgtatcagagcccta 6587769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 11252467 - 11252347
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctc 187  Q
    ||||||| ||||||||||||  || ||  |||||||| || ||||| ||| ||   |||||||||||||||||||||| ||||||||||||  || || |    
T  11252467 tggcataaaagcctcatcaattaattc--aacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatccc 11252370  T
Q  188 atccc--acgtatcagagcccta 208  Q
    |||||  ||||||||||||||||    
T  11252369 atcccgtacgtatcagagcccta 11252347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8415587 - 8415528
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaac 60  Q
    |||||| ||||| ||| ||| ||||| |||||||||||| |||||| |||||||||||||    
T  8415587 aacatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaac 8415528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 20005985 - 20006067
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaa-caataataattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| |||||| ||||||||||||||| ||||| ||||||  ||||| || |||||||||  ||||||||||||||||    
T  20005985 gctacatcagcatgttccaaaaattgatacataaggaatgaaaaataaataagaaatctcatcccgtacgtatcagagcccta 20006067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 28853100 - 28853162
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    |||||||||||||||||| ||||||||||||  || |||||||||  ||||||||||||||||    
T  28853100 aaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagagcccta 28853162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44430901 - 44430960
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaac 60  Q
    |||||| ||||| ||| ||| ||||| |||||||||||| |||||| |||||||||||||    
T  44430901 aacatccttcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaac 44430960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 5239555 - 5239624
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    |||||||||||| |||||| |||  ||||||||| ||| ||| |||||||||||||| |||| |||||||    
T  5239555 tgcagcggaatatttgcatcaaaagcaacaacaataacagtttaattctccataaaaatatcttggcata 5239624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 22177258 - 22177322
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  22177258 ttcaaaatttgatacataggaaagaaattaaacaata--aaatcccatcccacgtatcagagcccta 22177322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 25702074 - 25702041
Alignment:
Q  176 ataataattctcatcccacgtatcagagccctat 209  Q
    |||||||||| |||||||||||||||||||||||    
T  25702074 ataataattcccatcccacgtatcagagccctat 25702041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 26486537 - 26486504
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||| |||||||    
T  26486537 aataataattctcatcccacgtatcaaagcccta 26486504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 3697240 - 3697272
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  3697240 ataataattcccatcccacgtatcagagcccta 3697272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 6587601 - 6587629
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  6587601 aacaacaacaacaacggttaaattctcca 6587629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 7004613 - 7004581
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  7004613 ataataattcacatcccacgtatcagagcccta 7004581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 22049874 - 22049937
Alignment:
Q  146 tcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||| ||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  22049874 tcaaaatttgatacataggaaagaaattaaacaata--aaatcccatcccacgtatcagagcccta 22049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 27345327 - 27345359
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  27345327 ataataattcccatcccacgtatcagagcccta 27345359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 6324 - 6537
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||| || |||||| |||||| |||||||||| |||||||||||||| ||| |||| |||||  ||||||| |||||||||||||||| ||||    
T  6324 aacatctttcataa-cttcaaaaattatacagcggaatacttgcattaaacaactacatcaacagttaatgtctccatcaaattatcctggcatacaagc 6422  T
Q  101 ctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa------aacaataataattctcatcccac 194  Q
    |||||||||| ||||||||||| || || |     |||||| ||| |||||||||||||||||||||||||      || ||||||||||||||||||||    
T  6423 ctcatcaaaggaatctaaacaatcatagggtcttgtcatcaagttccaaaaattgatacataggaaagaaaaataataataataataattctcatcccac 6522  T
Q  195 gtatcagagccctat 209  Q
    |||||||||||||||    
T  6523 gtatcagagccctat 6537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 540 - 359
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    ||||||||||| || |||||| ||||||||||||||||| |||||||||||||| ||| |||| |||||  ||||||| |||||||||| ||||| ||||    
T  540 aacatctttcataa-cttcaaaaattatgcagcggaatacttgcattaaacaactacatcaacagttaatgtctccatcaaattatcctagcatacaagc 442  T
Q  101 ctcatcaaagaaatct-aaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    |||||||||| ||| | |||||| || || || ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  441 ctcatcaaaggaatttaaaacaatcatagggccacatcatcaagtttcaaaaattgatacataggaaag-aaaacaataataat 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 6e-33; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 49327568 - 49327686
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctca 188  Q
    ||||||| |||||||||||||||||||||||||| || || || ||||||||||||| |||||||||||||||||||||| |||||||||| |  || ||    
T  49327568 tggcataaaagcctcatcaaagaaatctaaacaatcatagggccacatcatcatgttccaaaaattgatacataggaaag-aaaacaataagacatccca 49327666  T
Q  189 tcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||    
T  49327667 tcccacgtatcagagcccta 49327686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21732218 - 21732326
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || |||||||||| ||||||||||||| ||||||||||  ||||||||||||| ||| |||||||| | |||| ||| ||||||| ||    
T  21732218 aacatctttcataaacttcaataat-atgcagcggaatatttgcattaaaagcaacaacaacaaccgtttaattctccttcaaataatcttggcataaaa 21732316  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  21732317 gcctcatcaa 21732326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 24109666 - 24109553
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttc 147  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||| | || |||| |||| || | |||    
T  24109666 aaacaacaacaataactgtttaattctccataaaattatcctggcataaaagcctcatcaaataaattcaaacaacaatagggctatatcagcaag-ttc 24109568  T
Q  148 aaaaattgatacata 162  Q
     ||||||||||||||    
T  24109567 caaaattgatacata 24109553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 20032651 - 20032440
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||||||||  || || |||||||||    ||| ||||||| |||    
T  20032651 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaacaatttaaatctccataattaaatcttggcataaaag 20032552  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acg 195  Q
    ||| ||||| | |||| | |||||||| || ||||| ||| ||   |||||||||||||||||||||| ||||||||||||  || |||||||||  |||    
T  20032551 ccttatcaacataaat-tcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacg 20032453  T
Q  196 tatcagagcccta 208  Q
    |||||||||||||    
T  20032452 tatcagagcccta 20032440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 21541548 - 21541601
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21541548 gatacataggaaagaaaaacaataataattctcatcccacatatcagagcccta 21541601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 16884116 - 16884024
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||| ||| ||||||| ||||||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| |||||    
T  16884116 aaataatcttggcataaaagcctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaa 16884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 20942432 - 20942340
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||| ||| ||||||| ||||| ||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| |||||    
T  20942432 aaataatcttggcataaaagccgcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaa 20942340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 11944601 - 11944777
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| ||||  || || |||||||||    ||| ||||||| |||||    
T  11944601 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 11944699  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||    
T  11944700 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataa 11944777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19667393 - 19667218
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||||| ||| ||||| |||||||||||| |||||| |||  ||||||| |||||  || |||||||||||||   ||| ||||||| ||    
T  19667393 aacatccttcaaaatcatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacgacaaccatttaattctccataaataaatcttggcataaaa 19667295  T
Q  99 gcctcatcaa-agaaatctaaacaacc---acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||||||||| | |||| | |||||||   | || |||||||||| | ||| ||||| |||||||||||||| |||||    
T  19667294 gcctcatcaacataaat-tcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaa 19667218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19852550 - 19852725
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||||| ||| ||||| |||||||||||| |||||| |||  ||||||| ||||| ||| |||||||||||||   |||  |||||| ||    
T  19852550 aacatccttcaaaatcatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacgacaactgtttaattctccataaataaatctcggcataaaa 19852648  T
Q  99 gcctcatcaa-agaaatctaaacaacc---acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
     ||||||||| | |||| | |||||||   | || |||||||||| | ||||||||| |||||||||||||| |||||    
T  19852649 acctcatcaacataaat-tcaacaaccaataaagggctacatcattaagtttcaaaatttgatacataggaatgaaaa 19852725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23196237 - 23196061
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcat--taaacaacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||||| ||| ||||| |||||||||||| ||||||    ||||||||| ||||| ||| |||||||||||||   ||| ||||||| ||    
T  23196237 aacatccttcaaaatcatcattaattttgcagcggaatatttgcatcgagaacaacaacgacaactgtttaattctccataaataaatcttggcataaaa 23196138  T
Q  99 gcctcatcaa-agaaatctaaacaacc---acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
     ||||||||| | |||| | |||||||   | || |||||||||| | ||| ||||| |||||||||||||| |||||    
T  23196137 acctcatcaacataaat-tcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaa 23196061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 21411322 - 21411173
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaac----aacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaaca 121  Q
    |||||||||||| || |||||||  ||||||||||    ||||||| |||||||||||||||   ||||||||  |||||||||||||| |||  |||||    
T  21411322 tgcagcggaatattttcattaaaaacaacaacaaccatcaacggtttaattctccataaaat---cctggcatgaaagcctcatcaaagtaattaaaaca 21411226  T
Q  122 accaca-gagctacatcatcatgtttcaaaaa-ttgatacataggaaagaaaa 172  Q
    || | | | ||||||||| ||||||  ||||| |||||||||||||| |||||    
T  21411225 acaataagggctacatcagcatgttcaaaaaaattgatacataggaatgaaaa 21411173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 37674895 - 37674945
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  37674895 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 37674945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 37681588 - 37681638
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  37681588 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 37681638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 43631349 - 43631256
Alignment:
Q  118 aacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || || ||||||  ||||||||||||||||    
T  43631349 aacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcacatcccgtacgtatcagagcccta 43631256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 20848676 - 20848755
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| || ||| |||||||||||||||||||| |||||| || | |||||| ||||||  ||||||||||||||||    
T  20848676 gctacatcagcaagttccaaaaattgatacataggaatgaaaaataa-agtaattcccatcccgtacgtatcagagcccta 20848755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19858685 - 19858860
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||||| ||| ||||| |||||||||||| |||||| |||  ||||||| ||||| ||| |||||||||||||   ||  ||||||| ||    
T  19858685 aacatccttcaaaatcatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacgacaactgtttaattctccataaataaattttggcataaaa 19858783  T
Q  99 gcctcatcaa-agaaatctaaacaacc---acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
     ||||||||| | |||| | |||||||   | || |||||||||| | ||| ||||| |||||||||||||| |||||    
T  19858784 acctcatcaacataaat-tcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaa 19858860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 21948891 - 21948954
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctcca 77  Q
    ||||||||||||||||||||||   |||||||  ||| ||| ||||||||||||||||||||||    
T  21948891 cttcaataattatgcagcggaaagcttgcatttcaaataaccacaacaacggttaaattctcca 21948954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 21962452 - 21962515
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctcca 77  Q
    ||||||||||||||||||||||   |||||||  ||| ||| ||||||||||||||||||||||    
T  21962452 cttcaataattatgcagcggaaagcttgcatttcaaataaccacaacaacggttaaattctcca 21962515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 42625821 - 42625853
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||||||    
T  42625821 ataataattctcatcccacgtatcagagcccta 42625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2341671 - 2341612
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaac 60  Q
    |||||| ||||| ||| ||| ||||| |||||||||||| |||||| |||||||||||||    
T  2341671 aacatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaac 2341612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 12237884 - 12237830
Alignment:
Q  54 caacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaa 108  Q
    ||||| |||| ||| ||||||||||||||| ||| ||||||| ||||||||||||    
T  12237884 caacatcaaccgtttaattctccataaaataatcttggcataaaagcctcatcaa 12237830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 36917337 - 36917387
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||| ||||||    
T  36917337 acatcattaagttccaaaaattgatacataggaaggaaaaacaacaataat 36917387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 41110476 - 41110539
Alignment:
Q  147 caaaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||   |||||||| ||||| ||||||||||||||||||||||    
T  41110476 caaaatttgatacataggaatgaaagaaaacaataaaaattc-catcccacgtatcagagcccta 41110539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 15317033 - 15316953
Alignment:
Q  131 ctacatcatcatgtttcaaaaattgatacataggaaagaaaa-acaataataattctcatccc--acgtatcagagcccta 208  Q
    |||||||| |||||| || ||||||||||||||||| ||||| |  | ||||| |||||||||  ||||||||||||||||    
T  15317033 ctacatcaacatgttccagaaattgatacataggaatgaaaataagaaaataaatctcatcccgtacgtatcagagcccta 15316953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 24849711 - 24849744
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||| ||||||||||||||    
T  24849711 aataataattctcatcccaagtatcagagcccta 24849744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 28557007 - 28556974
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||||||||||    
T  28557007 aataatagttctcatcccacgtatcagagcccta 28556974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 29597359 - 29597326
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||| ||||    
T  29597359 aataataattctcatcccacgtatcagagtccta 29597326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 16669809 - 16669749
Alignment:
Q  149 aaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    ||||||||  || ||||||||||||||||||||||    
T  16669809 aaaattgatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 16669749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 20292286 - 20292318
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  20292286 ataataattcccatcccacgtatcagagcccta 20292318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 21732369 - 21732431
Alignment:
Q  147 caaaaattgatacataggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    |||||||||||||||||||| | |||||||||| || || ||||||  ||||||||||||||||    
T  21732369 caaaaattgatacataggaatg-aaaacaataagaaatcccatcccgtacgtatcagagcccta 21732431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29555094 - 29555014
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataa 80  Q
    |||||| ||||||||| ||| ||||| |||||||| ||| |||||| ||| ||||||||||||| ||| ||  ||||||||    
T  29555094 aacatccttcaaaatcatcattaattttgcagcggtatatttgcatcaaaacaacaacaacaactgtttaaacctccataa 29555014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 208
Target Start/End: Original strand, 37681647 - 37681675
Alignment:
Q  180 taattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||||||||||    
T  37681647 taattctcatcccacgtatcagagcccta 37681675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 42625685 - 42625713
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  42625685 aacaacaacaacaacggttaaattctcca 42625713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 52990333 - 52990365
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  52990333 ataataattcccatcccacgtatcagagcccta 52990365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8684 - 8513
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcat-aga 97  Q
    |||||| ||||||| | ||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||||||||| |||| | |    
T  8684 aacatccttcaaaa-catcattaattttgcagcggaatatttgcattaaaaacaacaacgacaacggtttaattctccataaaattatcctagcataaaa 8586  T
Q  98 agcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||||||| |||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| ||||    
T  8585 agcctcatc-aagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaa 8513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23175 - 23100
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctc 75  Q
    |||||| ||||||| | ||| ||||| |||||||||||| |||||||  |||||||||| ||||||||| |||||||    
T  23175 aacatccttcaaaa-catcattaattttgcagcggaatatttgcattaaaaacaacaaccacaacggtttaattctc 23100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 63; Significance: 1e-27; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 49839 - 49667
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||| ||||||||||| ||    
T  49839 aacatccttcaaaa-catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaacggtttaattctccataaaatcatcctggcataaaa 49741  T
Q  99 gcctcatc-aaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||||||| ||| ||||  ||||||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  49740 gcctcatcaaaataaattcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 49667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 57372 - 57200
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||| ||||||||||| ||    
T  57372 aacatccttcaaaa-catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaacggtttaattctccataaaatcatcctggcataaaa 57274  T
Q  99 gcctcatc-aaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||||||| ||| ||||  ||||||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  57273 gcctcatcaaaataaatgcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 57200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 38245 - 38073
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| ||| ||||||  ||||||  |||||| || ||||||||||||||||||||| ||||| ||    
T  38245 aacatccttcaaaa-catcattaattttgcagcggaatatttggattaaaagcaacaatgacaacgatttaattctccataaaattatcctagcataaaa 38147  T
Q  99 gcctcatc-aaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||||||| ||| ||||  ||||||| | || | ||||||| ||  || ||||| |||||||||||||| ||||    
T  38146 gcctcatcaaaataaattcaaacaacaatagggttacatcaacaatttccaaaatttgatacataggaatgaaa 38073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 179604 - 179550
Alignment:
Q  155 gatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||  | ||||||||  |||||||||||||||||||||||||    
T  179604 gatacataggaaagaattaaaataataaaatctcatcccacgtatcagagcccta 179550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 9e-26; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 42220011 - 42220085
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  42220011 acatcatcatgttccaaaaattgatacataggaaag-aaaacaataataaatctcatcccacgtatcagagcccta 42220085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 30873376 - 30873536
Alignment:
Q  49 aacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttc 147  Q
    |||||||||| |||  ||| |||||||||||||||   ||||||||  |||||||||||||| |||  ||||||| | | ||||||||||| |||||| |    
T  30873376 aacaacaacatcaattgtttaattctccataaaat---cctggcatgaaagcctcatcaaagtaattaaaacaacaataagagctacatcagcatgttcc 30873472  T
Q  148 aaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    ||||||||||||||||||| |||||  ||||| ||| || ||||||  ||||||||||||||||    
T  30873473 aaaaattgatacataggaatgaaaataaataagtaaatcccatcccgtacgtatcagagcccta 30873536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 14556737 - 14556628
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| |||||||||||||||||| ||||||||||  | ||||| ||||| ||| ||||||||||||||| ||| ||||||| ||    
T  14556737 aacatccttcaaaa-catcattaattatgcagcggaatatttgcattaaaagcgacaacgacaactgtttaattctccataaaatcatcatggcataaaa 14556639  T
Q  99 gcctcatcaaa 109  Q
    |||||||||||    
T  14556638 gcctcatcaaa 14556628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 14508438 - 14508360
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| |||||| |||||||||||||||||||||||||   || ||||| || ||||||||||||||||||||||    
T  14508438 gctacatcagcatgttccaaaaattgatacataggaaagaaattaaacaataaatcccatcccacgtatcagagcccta 14508360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 2973258 - 2973205
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  2973258 gatacataggaaagaaaaacaataataattcccctcccacgtatcagagcccta 2973205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 20888900 - 20888981
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaa------acaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| |||||||||||||||||||||||| |||||      | |||||||| |||||||||||||||||||||||||    
T  20888900 acatcatcaagtttcaaaaattgatacataggaaggaaaacaattcataataataaatctcatcccacgtatcagagcccta 20888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 14062438 - 14062646
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| || |||||||||| |||||| |||||||||    ||| ||||||| |||    
T  14062438 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacagcaacaacaactgttaaaatctccataattaaatcttggcataaaag 14062537  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa--aaacaataataattctcatcccacgt 196  Q
    ||| ||||| | |||| | ||| |||| || ||||||||| ||   |||||||||||||||||||||| |||   |||| ||  || || ||||||||||    
T  14062538 ccttatcaacataaat-tcaacgaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaggtaacatta--aaatcccatcccacgt 14062634  T
Q  197 atcagagcccta 208  Q
    ||||||||||||    
T  14062635 atcagagcccta 14062646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 41529732 - 41529524
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||||||||||||| ||| ||||| |||||||||| | ||| || ||| ||||||||||||| ||| || |||| ||||    ||| ||||||| |||    
T  41529732 aacatctttcaaaatcatcattaattttgcagcggaaaatttgtatcaaaacaacaacaacaactgtttaaatctctataattaaatcttggcataaaag 41529633  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa--aaacaataataattctcatcccacgt 196  Q
    ||| ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| |||   |||| ||| ||| || |||||||||    
T  41529632 ccttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaggtaacattaa-aatcct-atcccacgt 41529536  T
Q  197 atcagagcccta 208  Q
    ||||||||||||    
T  41529535 atcagagcccta 41529524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 20894519 - 20894600
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaa------acaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| |||||||||||||||||||||||| |||||      | |||||||| || ||||||||||||||||||||||    
T  20894519 acatcatcaagtttcaaaaattgatacataggaaggaaaacaattcataataataaatcccatcccacgtatcagagcccta 20894600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 37839663 - 37839487
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| ||||  || || |||||||||    ||| ||||||| |||||    
T  37839663 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 37839565  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||    
T  37839564 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataa 37839487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 30395746 - 30395798
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  30395746 gatacataggaaagaaaa-cattaataattcccatcccacgtatcagagcccta 30395798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 16484143 - 16484291
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacc- 124  Q
    |||||||||||| || |||||||  ||||||||||||  ||| |||||||||  |||  |||||| |||| ||||||||||||| || ||  |||||||     
T  16484143 tgcagcggaatattttcattaaaaacaacaacaacaaatgtttaattctccactaaacaatcctgacataaaagcctcatcaaataattc--aacaacca 16484240  T
Q  125 ---acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
       | || ||||||| | |||||| |||||||||||||||||||| |||||    
T  16484241 aataaagggctacattagcatgttccaaaaattgatacataggaatgaaaa 16484291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 11203011 - 11202961
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  11203011 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 11202961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 11209166 - 11209116
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  11209166 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 11209116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 11936609 - 11936659
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  11936609 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 11936659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 35463191 - 35463141
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  35463191 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 35463141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 1583471 - 1583504
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  1583471 aataataattctcatcccacgtatcagagcccta 1583504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 42598247 - 42598184
Alignment:
Q  148 aaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    ||||||||||||||||||| ||||||||||||  || |||||||||  ||||||||||||||||    
T  42598247 aaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagagcccta 42598184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 13900156 - 13900113
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaa 173  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||    
T  13900156 gctacatcagcatgttccaaaaattgatacataggaatgaaaaa 13900113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 12931491 - 12931572
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| || ||| ||||||||||||||| ||||| |||||||||||| || |  ||||||  ||||||||||||||||    
T  12931491 gctacatcagcaagttgcaaaaattgatacataaggaatgaaaaacaataagaaattccatcccgtacgtatcagagcccta 12931572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 15243661 - 15243715
Alignment:
Q  54 caacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaa 108  Q
    ||||| |||| ||| ||||||||||||||| ||| ||||||| ||||||||||||    
T  15243661 caacatcaaccgtttaattctccataaaataatcttggcataaaagcctcatcaa 15243715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 15406519 - 15406601
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||||| |||||||| ||| |||||| ||||| | | || |||||| |||||   ||||||| |||||||||||||||||||    
T  15406519 tggcataaaagcctcaacaaggaaatccaaacatcaatagggctacaacatcaatattcaaaatttgatacataggaaagaaa 15406601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 19128909 - 19128859
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||| | ||| |||||||||||||||||||| ||||| ||||||||||    
T  19128909 acatcattaagttccaaaaattgatacataggaaggaaaagcaataataat 19128859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 20939918 - 20939995
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| | |||| |||||||||||||||||| ||||||   || ||||| || |||||||| |||||||||||||    
T  20939918 gctacatcagcttgttccaaaaattgatacatagg-aagaaattaaacaataagtcccatcccacatatcagagcccta 20939995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 21881038 - 21881084
Alignment:
Q  49 aacaacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    ||||||||||||||||||||||||||||| || | |||| |||||||    
T  21881038 aacaacaacaacaacggttaaattctccaaaacaatatcttggcata 21881084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 45143244 - 45143163
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    |||||| |||||||||||||||   |||||||  ||| ||| |||||||||||||||||||||| || | |||| |||||||    
T  45143244 cttcaaaaattatgcagcggaaagtttgcatttcaaataaccacaacaacggttaaattctccaaaataatatcttggcata 45143163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 45152013 - 45151932
Alignment:
Q  16 cttcaataattatgcagcggaataattgcatt--aaacaacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    |||||| |||||||||||||||   |||||||  ||| ||| |||||||||||||||||||||| || | |||| |||||||    
T  45152013 cttcaaaaattatgcagcggaaagtttgcatttcaaataaccacaacaacggttaaattctccaaaataatatcttggcata 45151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2973413 - 2973333
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatta-----aacaacaacaacaacggttaaattctcca 77  Q
    ||||||||||| || |||||| ||| ||||||||||||  |||||||      |||||||||||||||||||||||||||||    
T  2973413 aacatctttcataa-cttcaaaaatcatgcagcggaatgtttgcatttcaaataacaacaacaacaacggttaaattctcca 2973333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 5938487 - 5938520
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  5938487 aataataattcccatcccacgtatcagagcccta 5938520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 10977578 - 10977489
Alignment:
Q  73 ctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacata 162  Q
    ||||| ||||| ||||||||||| |||||||||||||  |||  ||||||| | || |||||||||  ||||| |||||  |||||||||    
T  10977578 ctccacaaaataatcctggcataaaagcctcatcaaattaattcaaacaacaatagggctacatcagtatgttccaaaatatgatacata 10977489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 16750543 - 16750607
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  16750543 ttcaaaatttgatacataggaaagaaattaaacaata--aaatcccatcccacgtatcagagcccta 16750607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 19128858 - 19128825
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  19128858 aataataattcccatcccacgtatcagagcccta 19128825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 21396376 - 21396409
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  21396376 aataataattcccatcccacgtatcagagcccta 21396409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 23121271 - 23121335
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  23121271 ttcaaaatttgatacataggaaagaaattaaacaata--aaatcccatcccacgtatcagagcccta 23121335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 29455934 - 29455905
Alignment:
Q  179 ataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||    
T  29455934 ataattctcatcccacgtatcagagcccta 29455905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 33198682 - 33198715
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  33198682 aataataattcccatcccacgtatcagagcccta 33198715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 13481386 - 13481354
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  13481386 ataataattcccatcccacgtatcagagcccta 13481354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 15471132 - 15471100
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  15471132 ataataattcccatcccacgtatcagagcccta 15471100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 15546206 - 15546238
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacata 162  Q
    ||||||||| |||||||||||||||||||||||    
T  15546206 gctacatcagcatgtttcaaaaattgatacata 15546238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16220756 - 16220836
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataa 80  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||||||||  || || |||||||||    
T  16220756 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactatttaaatctccataa 16220836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 23436512 - 23436480
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  23436512 ataataattcccatcccacgtatcagagcccta 23436480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 27904890 - 27904949
Alignment:
Q  150 aaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  27904890 aaattgatacataggaaagaaattaaacaata--aaatcacatcccacgtatcagagcccta 27904949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 34771795 - 34771827
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  34771795 ataataattcccatcccacgtatcagagcccta 34771827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 36036410 - 36036442
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||||||||||||||||    
T  36036410 ataatgattctcatcccacgtatcagagcccta 36036442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 43251716 - 43251748
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||||||||||||||    
T  43251716 ataataaatctcatcccacgtatcagagcccta 43251748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 369939 - 370111
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||||||||| | ||| ||||| |||||||||||| ||||||||||  ||||||| ||||| ||| |||||| |||||||| ||||||||||| ||    
T  369939 aacatctttcaaaa-catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaacagtttaattctacataaaatcatcctggcataaaa 370037  T
Q  99 gcctcatc-aaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||||||| ||| ||||  ||||||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  370038 gcctcatcaaaataaattcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 370111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7326 - 7218
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| ||| ||||||||| ||||||||||||| |||||| |||  ||||||||||||||||| ||||||||||||| | ||| ||||||| ||    
T  7326 aacatctttcataattttcaataat-atgcagcggaatatttgcatcaaaagcaacaacaacaacggtttaattctccataaagtaatcttggcataaaa 7228  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  7227 gcctcatcaa 7218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5034 - 5248
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    ||||||||||| || ||||||||||| |||||||||||| ||||||||||  |||||||||| || ||| || |||||||||||| ||| ||||||| ||    
T  5034 aacatctttcataaacttcaataatt-tgcagcggaatatttgcattaaaagcaacaacaacgactgtttaaatctccataaaataatcttggcataaaa 5132  T
Q  99 gcctcatcaa-agaaatctaaacaacc---acagagctacatcatcatgttt-caaaaattgatacataggaaagaaaaacaataataattctcatcc-- 191  Q
    |||||||||| | |||| | ||| |||   | || ||||||||  || |||| ||||||| |||||||||||| |||||||||||| || || |||||      
T  5133 gcctcatcaagataaat-tcaactaccaataaagggctacatccacaagtttccaaaaatggatacataggaatgaaaaacaataagaaatcccatcctg 5231  T
Q  192 cacgtatcagagcccta 208  Q
     ||||||||||||||||    
T  5232 tacgtatcagagcccta 5248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 14094 - 14245
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc-aaagaaatc---taaaca 121  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||||| ||| ||||||| |||||||||| ||| |||||    || ||    
T  14094 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaagcctcatcaaaataaatccaacaatca 14193  T
Q  122 accacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaa 173  Q
    |  | || ||||||||| |||||| |||||||||||||||||||| ||||||    
T  14194 aataaagggctacatcaacatgttccaaaaattgatacataggaatgaaaaa 14245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 17864 - 18015
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc-aaagaaatc---taaaca 121  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||||| ||| ||||||| |||||||||| ||| |||||    || ||    
T  17864 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaagcctcatcaaaataaatccaacaatca 17963  T
Q  122 accacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaa 173  Q
    |  | || ||||||||| |||||| |||||||||||||||||||| ||||||    
T  17964 aataaagggctacatcaacatgttccaaaaattgatacataggaatgaaaaa 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39209 - 39381
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||||||||||| |||| ||||||||||  |||| || ||||| ||| ||||||||||||||| |||||||| || ||    
T  39209 aacatccttcaaaa-catcattaattatgcagcgaaatatttgcattaaaagcaaccacgacaactgtttaattctccataaaatcatcctggcttaaaa 39307  T
Q  99 gcctcatc-aaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||||||| ||| ||||  ||||||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  39308 gcctcatcaaaataaattcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 39381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 174 - 90
Alignment:
Q  27 atgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    ||||||||||| | ||||||||||  ||||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||||    
T  174 atgcagcggaacatttgcattaaaagcaacaacaacaactgtttaattctccatcaaattatcctggcataaaagcctcatcaaa 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 19822 - 19769
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19822 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 19769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 22642 - 22589
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22642 gatacataggaaagaaaaacaataataattcccatcccacgtatcagagcccta 22589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 449 - 299
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaa--tc-taaacaa 122  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||| | ||| ||||||| |||||||||||||  ||  || ||| |||    
T  449 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaagtaatcttggcataaaagcctcatcaaaataagttcataatcaa 350  T
Q  123 ccac-agagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
      || || |||||||||||||||| |||||||||||||||||||| |||||    
T  349 atacaagggctacatcatcatgttccaaaaattgatacataggaatgaaaa 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 18740 - 18648
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||| ||| ||||||| ||||||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| |||||    
T  18740 aaataatcttggcataaaagcctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaa 18648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 24366 - 24274
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||| ||| ||||||  ||||||||||||||||||  ||||||| | || |||||| ||||||||| ||||| |||||||||||||| |||||    
T  24366 aaataatcttggcatgaaagcctcatcaaagaaattcaaacaacaatagggctacaacatcatgttccaaaatttgatacataggaatgaaaa 24274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 74716 - 74636
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaa-----aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| ||| |||||||||||||||||||||||||     || ||||||||||||||||||||||||||||||||||    
T  74716 acatcatcaagttccaaaaattgatacataggaaagaaaacaataataataataattctcatcccacgtatcagagcccta 74636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 146525 - 146700
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||| ||||||| |||||| |||  ||||||||||||| ||| ||||||||||||||| ||| ||||||| ||    
T  146525 aacatccttcaaaaacatcattaatt-tgcaacggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaa 146623  T
Q  99 gcctcatc-aaagaaatctaaacaacca---cagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||||||| ||| |||||  |||||| |    || ||||||||| |||||| |||||||||||||||||||| |||||    
T  146624 gcctcatcaaaataaatc-caacaactaaataagggctacatcaacatgttccaaaaattgatacataggaatgaaaa 146700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 198014 - 197922
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||| ||| ||||||| ||||||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| |||||    
T  198014 aaataatcttggcataaaagcctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaa 197922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 251403 - 251484
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaa 81  Q
    |||||| ||||||||| ||| ||||| |||||||||||| |||||| |||  ||||||| ||||| ||| |||||||||||||    
T  251403 aacatccttcaaaatcatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacgacaactgtttaattctccataaa 251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 57891 - 57708
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||| || || ||||||||||| |||||||||||| ||||||||||  ||||||||||||  ||| || |||||||||||| ||| ||||||| ||    
T  57891 aacatcttacataaacttcaataatt-tgcagcggaatatttgcattaaaagcaacaacaacaattgtttaaatctccataaaataatcttggcataaaa 57793  T
Q  99 gcctcatcaaagaaatctaaacaacc---acagagctacatcatcatgttt-caaaaattgatacataggaaagaaaaacaataa 179  Q
    ||||| ||||  |||  | |||||||   | |  ||||||||  || |||| |||||||||||||||||||| ||||||||||||    
T  57792 gcctcttcaagaaaaattcaacaaccaataaaaggctacatccacaagtttccaaaaattgatacataggaatgaaaaacaataa 57708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 140742 - 140925
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||| || || ||||||||||| |||||||||||| ||||||||||  ||||||||||||  ||| || |||||||||||| ||| ||||||| ||    
T  140742 aacatcttacataaacttcaataatt-tgcagcggaatatttgcattaaaagcaacaacaacaattgtttaaatctccataaaataatcttggcataaaa 140840  T
Q  99 gcctcatcaaagaaatctaaacaacc---acagagctacatcatcatgttt-caaaaattgatacataggaaagaaaaacaataa 179  Q
    ||||| ||||  |||  | |||||||   | |  ||||||||  || |||| |||||||||||||||||||| ||||||||||||    
T  140841 gcctcttcaagaaaaattcaacaaccaataaaaggctacatccacaagtttccaaaaattgatacataggaatgaaaaacaataa 140925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 208
Target Start/End: Complemental strand, 3302 - 3148
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaat 153  Q
    |||| |||| ||| |||||||||||||||   |||||| |  |||||||||||||| |||  ||||||| | | | ||||| ||| |||||| |||||||    
T  3302 aacatcaactgtttaattctccataaaat---cctggcgtgaaagcctcatcaaagtaattaaaacaacaataagggctacgtcagcatgttccaaaaat 3206  T
Q  154 tgatacat-aggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    |||||||| ||||| |||||  ||||| || || ||||||  ||||||||||||||||    
T  3205 tgatacataaggaatgaaaataaataagaaatcccatcccgtacgtatcagagcccta 3148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 1964 - 2042
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| |||||| |||||||||||||||||||||||||   || ||||| || ||||||||||||||||||||||    
T  1964 gctacatcagcatgttccaaaaattgatacataggaaagaaattaaacaataaatcccatcccacgtatcagagcccta 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 2069 - 1991
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||| ||||| ||| |||||   ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  2069 gctacaacatcaagttccaaaataagatacataggaaagaaaaacaataataattcccatcccacgtatcagagaccta 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 47; Significance: 5e-18; HSPs: 3)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 27437 - 27261
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| |||||| |||  ||||||||| ||| ||| ||||||||||||||| ||| ||||||| ||    
T  27437 aacatccttcaaaaacatcattaatt-tgcagcggaatatttgcatcaaaagcaacaacaataactgtttaattctccataaaataatcttggcataaaa 27339  T
Q  99 gcctcatcaa-agaaatctaaacaacc----acagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||||||||| | |||| | |||||||    | || ||||||||  |||||| |||||||||||||||||||| |||||    
T  27338 gcctcatcaagataaat-tcaacaaccaaataaagggctacatccacatgttccaaaaattgatacataggaatgaaaa 27261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 14738 - 14785
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataat 180  Q
    ||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  14738 acatcatcaagttccaaaaattgatacataggaaggaaaaacaataat 14785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 18748 - 18798
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat 183  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  18748 acatcatcaagttccaaaaattgatacataggaaggaaaaacaacaataat 18798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 55439 - 55647
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaag 99  Q
    |||||| ||||||||| ||| ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || |||||||||    ||| ||||||| |||    
T  55439 aacatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaag 55538  T
Q  100 cctcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa--aaacaataataattctcatcccacgt 196  Q
    ||| ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| |||   |||| ||  || || ||||||||||    
T  55539 ccttatcaacataaat-tcaacaaccatagggctacatcaacaatattcaaaaattgatacataggaatgaaggtaacatta--aaatcccatcccacgt 55635  T
Q  197 atcagagcccta 208  Q
    ||||||||||||    
T  55636 atcagagcccta 55647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 47333 - 47241
Alignment:
Q  80 aaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    |||| ||| ||||||| | ||||||||||||||||  ||||||| | || |||||||||||||||| ||||| |||||||||||||| |||||    
T  47333 aaataatcttggcataaacgcctcatcaaagaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaa 47241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 35821 - 35865
Alignment:
Q  129 agctacatcatcatgtttcaaaaattgatacataggaaagaaaaa 173  Q
    |||||||||| || ||| |||||||||||||||||||| ||||||    
T  35821 agctacatcaacaagttccaaaaattgatacataggaatgaaaaa 35865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7931 - 7759
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||| ||||||| | ||| ||||| |||||||||||| ||||||||||  |||||   ||| | ||| ||||||||||||||| ||||||||||| ||    
T  7931 aacatccttcaaaa-catcattaattttgcagcggaatatttgcattaaaagcaacatagacagctgtttaattctccataaaatcatcctggcataaaa 7833  T
Q  99 gcctcatcaaaga-aatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    |||||||||||   |||  ||||||| | || ||||||||| ||  || ||||| |||||||||||||| ||||    
T  7832 gcctcatcaaaattaattcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaa 7759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 33664 - 33868
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatc 106  Q
    ||||||||| ||| ||||| |||||||||| | |||||| ||| ||||||||||||| ||| || ||||||||     ||| ||||||| |||| | |||    
T  33664 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaacagtttaaatctccatagttaaatcttggcataaaagcattatc 33763  T
Q  107 aa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcaga 202  Q
    || | |||| | |||||||| || ||||| ||| ||   |||||||||||||||||||||| ||||||||||||  || |||||||||  ||||||||||    
T  33764 aacataaat-tcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcaga 33862  T
Q  203 gcccta 208  Q
    ||||||    
T  33863 gcccta 33868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 8482 - 8534
Alignment:
Q  155 gatacataggaaagaaaaacaataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  8482 gatacataggaaagaaaa-caataataattcccatcccacgtatcagagcccta 8534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 32234 - 32173
Alignment:
Q  48 aaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    |||||||||||||||| ||| |||| ||||||||||||||||| |||| |||||||||||||    
T  32234 aaacaacaacaacaactgtttaattatccataaaattatcctgccataaaagcctcatcaaa 32173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 321 - 429
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataaaattatcctggcatagaagc 100  Q
    |||||| |||| || |||||||||||| ||||||   || ||||||||||||||| ||  ||| |||||||||||| ||| |||||||||||||| | ||    
T  321 aacatccttcataaacttcaataattaagcagcgaggtatttgcattaaacaacatcattaacagttaaattctccgtaacattatcctggcataaatgc 420  T
Q  101 ctcatcaaa 109  Q
    |||| ||||    
T  421 ctcaacaaa 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 15341 - 15424
Alignment:
Q  28 tgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    |||||||||||| |||||| |||  ||||||||||||| ||| ||||||||||||||| |||  |||||| |||||||||||||    
T  15341 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatctaggcataaaagcctcatcaaa 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 102242 - 102166
Alignment:
Q  137 catcatgtttcaaaaattgatacataggaaagaaa-----aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| ||| |||||||||||||||||||||||||     || ||| ||||||||||||||||||||||||||||||    
T  102242 catcaagttccaaaaattgatacataggaaagaaaacaataataatgataattctcatcccacgtatcagagcccta 102166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 37445 - 37538
Alignment:
Q  118 aacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||  || |||||||||  ||||||||||||||||    
T  37445 aacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagagcccta 37538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 43008 - 43090
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa-acaataataattctcatccc--acgtatcagagccctat 209  Q
    ||||||||| |||||| |||||||||||||||||||| ||||| | || ||||| |||||||||  || ||||||||||||||    
T  43008 gctacatcaacatgttccaaaaattgatacataggaatgaaaataaaaaaataaatctcatcccgtacatatcagagccctat 43090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 28531 - 28416
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaat 153  Q
    |||| |||| ||| |||||||||||||||   ||||||||  |||||||||||||| |||  ||||||| | | | ||||||||| |||||| |||||||    
T  28531 aacatcaactgtttaattctccataaaat---cctggcatgaaagcctcatcaaagtaattcaaacaacaataagggctacatcagcatgttccaaaaat 28435  T
Q  154 tgatacataggaaagaaaa 172  Q
    ||||||||||||| |||||    
T  28434 tgatacataggaatgaaaa 28416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 3765 - 3589
Alignment:
Q  3 catctttcaaaatcttcaataattatgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcc 101  Q
    |||| ||||||||| ||| ||||| |||||||||| | |||||| ||| |||||||| ||||  || || |||||||||    ||| ||||||| |||||    
T  3765 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 3667  T
Q  102 tcatcaa-agaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataa 179  Q
    | ||||| | |||| | |||||||| || ||||||||| ||   |||||||||||||||||||||| ||||||||||||    
T  3666 ttatcaacataaat-tcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataa 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39357 - 39248
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||| || || ||||||||  |||||| ||||||| |||||| |||  |||||||||||| |||| ||||||||||||| |  || ||||||| ||    
T  39357 aacatcttccataaacttcaatagatatgcaccggaatatttgcatcaaaagcaacaacaacaatggtttaattctccataaagtattcttggcataaaa 39258  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  39257 gcctcatcaa 39248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 137417 - 137308
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcctggcatagaa 98  Q
    |||||||| || || ||||||||  |||||| ||||||| |||||| |||  |||||||||||| |||| ||||||||||||| |  || ||||||| ||    
T  137417 aacatcttccataaacttcaatagatatgcaccggaatatttgcatcaaaagcaacaacaacaatggtttaattctccataaagtattcttggcataaaa 137318  T
Q  99 gcctcatcaa 108  Q
    ||||||||||    
T  137317 gcctcatcaa 137308  T

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Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 103899 - 103931
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  103899 ataataattcccatcccacgtatcagagcccta 103931  T

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Target: scaffold0661 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 4672 - 4584
Alignment:
Q  85 atcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||||  ||||||||| |||| |||  ||||||| | | | |||||||||||||||| |||||||||||||||||||| |||||    
T  4672 atcctggcatgaaagcctcattaaagtaattaaaacaacaataagggctacatcatcatgttccaaaaattgatacataggaatgaaaa 4584  T

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Target: scaffold0324 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 7738 - 7623
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacca-cagagctacatcatcatgtttcaaaaat 153  Q
    |||| |||| ||| |||||||||||||||   ||||||||  |||||||||||||| |||  ||||||| |  ||  |||||||| |||||| |||||||    
T  7738 aacatcaactgtttaattctccataaaat---cctggcatgaaagcctcatcaaagtaattcaaacaacaataaggcctacatcagcatgttccaaaaat 7642  T
Q  154 tgatacataggaaagaaaa 172  Q
    ||||||||||||| |||||    
T  7641 tgatacataggaatgaaaa 7623  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 64523 - 64627
Alignment:
Q  69 aattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccaca-gagctacatcatcatgtttcaaaaattgatacataggaaa 167  Q
    |||||||||  |||| ||| ||||||| ||| |||||||||| |||  ||||||| | | | |||||||||||||||| ||||| ||||||||||||||     
T  64523 aattctccaataaataatcttggcataaaagtctcatcaaagtaattcaaacaacaataagggctacatcatcatgttccaaaatttgatacataggaat 64622  T
Q  168 gaaaa 172  Q
    |||||    
T  64623 gaaaa 64627  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 28341 - 28222
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaa--aaacaataataattct 186  Q
    ||||||| ||||||||||||  ||||| ||||| | | || |||||| || ||   ||||||||||||||||||||||||||  || |||||  || ||     
T  28341 tggcataaaagcctcatcaagaaaatccaaacatcaatagggctacaacagcaatattcaaaaattgatacataggaaagaattaagcaata--aagtcc 28244  T
Q  187 catcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    
T  28243 catcccacgtatcagagcccta 28222  T

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Target: scaffold0363 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1456 - 1554
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcatt--aaa---caacaacaacaacggttaaattctccataaaattatcctggcata 95  Q
    ||||||||||| || |||||| ||||||||| ||||||| |||||||  |||   ||||||||||||||||||||||||||| || | |||| |||||||    
T  1456 aacatctttcataa-cttcaaaaattatgcaacggaatatttgcattttaaatagcaacaacaacaacggttaaattctccaaaacaatatcttggcata 1554  T

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Target: scaffold0301 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 2858 - 2939
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| || ||| ||||||||||||||| ||||  |||||||||||| || |||||||||  ||||||||||||||||    
T  2858 gctacatcagcaagttccaaaaattgatacataaggattgaaaaacaataagaaatctcatcccgtacgtatcagagcccta 2939  T

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Target: scaffold0301; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 14059 - 13987
Alignment:
Q  8 ttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaacaacggttaaattctccataa 80  Q
    |||||||||  || ||||| |||| ||||| | |||||| |||||||||||||||| ||| || |||||||||    
T  14059 ttcaaaatcaacattaattttgcaacggaaaatttgcatcaaacaacaacaacaactgtttaaatctccataa 13987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 23977 - 24058
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaa-caataataattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| || ||| |||||||||||||||||||| ||||||  ||||| || |||||||||  ||||||||||||||||    
T  23977 gctacatcagcaagttccaaaaattgatacataggaatgaaaaataaataagaaatctcatcccgtacgtatcagagcccta 24058  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 494558 - 494436
Alignment:
Q  89 tggcatagaagcctcatcaaa-gaaatctaaacaaccacagagctacatcatca-tgtttcaaaaattgatacataggaaagaaaaacaataa-taattc 185  Q
    ||||||| ||||||||||||| |||| | || || ||| || |||||| || || ||||||||||||||||||||||||||||||   | |||  || ||    
T  494558 tggcataaaagcctcatcaaaagaaaccaaatcatccatagggctacaacaacagtgtttcaaaaattgatacataggaaagaaattaattaacaaaatc 494459  T
Q  186 tcatcccacgtatcagagcccta 208  Q
     ||||||||||||||||||||||    
T  494458 ccatcccacgtatcagagcccta 494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 175078 - 175015
Alignment:
Q  147 caaaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||| |||||||||||||| ||||   |||||||| ||| ||||||||||||||||||||||||    
T  175078 caaaatttgatacataggaatgaaagaaaacaataaaaat-ctcatcccacgtatcagagcccta 175015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 488790 - 488852
Alignment:
Q  147 caaaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    |||||||||||||||||||| |||| | || |||||  || ||||||||||||||||||||||    
T  488790 caaaaattgatacataggaatgaaagaaaacaataaaatcccatcccacgtatcagagcccta 488852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 513082 - 513050
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  513082 ataataattcccatcccacgtatcagagcccta 513050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 519499 - 519467
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  519499 ataataattcccatcccacgtatcagagcccta 519467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 12522 - 12555
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||||||||||    
T  12522 aataataattctcatcccacgtatcagagcccta 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 7333 - 7366
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  7333 aataataattcacatcccacgtatcagagcccta 7366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 25239 - 25315
Alignment:
Q  131 ctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaacaataataattctcatccc--acgtatcagagc 204  Q
    |||||||| || ||| ||||||||||||||| ||||| |||||||||||| || |||||||||  ||||||||||||    
T  25239 ctacatcagcaagttccaaaaattgatacataaggaatgaaaaacaataagaaatctcatcccgtacgtatcagagc 25315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 25920 - 25984
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||||||||   |||||||| |  |||||||||||||||||||||||||    
T  25920 ttcaaaatttgatacataggaaagaaattaaacaataaaa--tctcatcccacgtatcagagcccta 25984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 41602 - 41666
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaa---aacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||||||||   |||||||| |  |||||||||||||||||||||||||    
T  41602 ttcaaaatttgatacataggaaagaaattaaacaataaaa--tctcatcccacgtatcagagcccta 41666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2993 - 2913
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcat-taaacaacaacaacaacggttaaattctccataa 80  Q
    |||||| ||||||||| ||| ||||| |||||||||||| ||||||  |||||||||||||||  ||| || |||||||||    
T  2993 aacatccttcaaaatcatcattaattttgcagcggaatatttgcatcaaaacaacaacaacaattgtttaaatctccataa 2913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17749 - 17669
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcat-taaacaacaacaacaacggttaaattctccataa 80  Q
    |||||| ||||||||| ||| ||||| |||||||||||| ||||||  |||||||||||||||  ||| || |||||||||    
T  17749 aacatccttcaaaatcatcattaattttgcagcggaatatttgcatcaaaacaacaacaacaattgtttaaatctccataa 17669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 208
Target Start/End: Original strand, 76292 - 76446
Alignment:
Q  55 aacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaacca-cagagctacatcatcatgtttc-aaaaa 152  Q
    |||| |||| ||| |||||||||||||   ||| ||||||  |||||||||||||| |||  ||||||| |  || ||||||||| |||||| | |||||    
T  76292 aacatcaactgtttaattctccataaa---atcttggcatgaaagcctcatcaaagtaattcaaacaacaataagggctacatcaacatgttacaaaaaa 76388  T
Q  153 ttgatacataggaaagaaaaacaataataattctcatccc--acgtatcagagcccta 208  Q
    |||||||||| ||| |||||  || || || |||||||||  ||||||||||||||||    
T  76389 ttgatacatatgaatgaaaataaacaagaaatctcatcccgtacgtatcagagcccta 76446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 16026 - 15906
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa--aacaataataattct 186  Q
    ||||||| |||||||| | |  ||||| |||||| || || |||||| || |||  | ||||| |||||||||||||| ||||  |||| ||| ||| ||    
T  16026 tggcataaaagcctcaaccagaaaatccaaacaatcatagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaat-ct 15928  T
Q  187 catcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||    
T  15927 catcccacgtatcagagcccta 15906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 115380 - 115463
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacat-aggaaagaaaaa-caataat-aattctcatccc--acgtatcagagcccta 208  Q
    ||||||||| || ||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||  ||||||||||||||||    
T  115380 gctacatcagcaagtttcaaaaattgatacataaggaatgaaaaataaataataaattctcatcccgtacgtatcagagcccta 115463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 108 - 174
Alignment:
Q  145 ttcaaaaattgatacataggaaagaaaaacaataa-taattctcatccc--acgtatcagagcccta 208  Q
    |||||||||||||| ||||||| ||||||||||||  || |||||||||  ||||||||||||||||    
T  108 ttcaaaaattgatatataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagagcccta 174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 485 - 406
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataat-tctcatcccacgtatcagagcccta 208  Q
    |||||| ||||||  | ||||| |||||||||||||| |||| | ||||||||  || ||||||||||||||||||||||    
T  485 gctacaacatcattatccaaaatttgatacataggaatgaaagaaaataataaaatcccatcccacgtatcagagcccta 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 5550 - 5443
Alignment:
Q  69 aattctccataaaattatcctggcatagaagcctcatcaaag-aaatctaaacaaccacaga----gctacatcatcatgtttcaaaaattgatacatag 163  Q
    |||||||||| |||| ||| ||||||| |||||||||||||  ||||| || |||||| | |    ||||||||| |||||| |||||||||||||||||    
T  5550 aattctccattaaataatcttggcataaaagcctcatcaaaataaatccaa-caaccaaataaagggctacatcaacatgttccaaaaattgatacatag 5452  T
Q  164 gaaagaaaa 172  Q
    ||| |||||    
T  5451 gaatgaaaa 5443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 8126 - 8204
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa-acaataataattctcatccc--acgtatcagagcc 205  Q
    ||||||||| |||||| |||||||||||||||||||| ||||| |  | ||||| |||||||||  |||||||||||||    
T  8126 gctacatcaacatgttccaaaaattgatacataggaatgaaaataagaaaataaatctcatcccgtacgtatcagagcc 8204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1391 - 1450
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaac 60  Q
    |||||| ||||| ||| ||| ||||| |||||||||||| |||||| |||||||||||||    
T  1391 aacatccttcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaac 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 1095 - 1177
Alignment:
Q  89 tggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||||| |||||||| ||| |||||| ||||| | | || |||||| |||||   ||||||| |||||||||||||||||||    
T  1095 tggcataaaagcctcaacaaggaaatccaaacatcaatagggctacaacatcaatattcaaaatttgatacataggaaagaaa 1177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 170 - 92
Alignment:
Q  73 ctccataaaattatcctggcatagaagcctcatcaaagaaatctaaacaaccacagagctacatcatcatgtttcaaaa 151  Q
    ||||| ||||| ||||||||||| |||||||||||||  |||  ||||||| | || ||||||||| |||||| |||||    
T  170 ctccacaaaataatcctggcataaaagcctcatcaaattaattcaaacaacaatagggctacatcagcatgttccaaaa 92  T

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Target: scaffold0827 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 1437 - 1395
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  1437 gctacatcaacatgttccaaaaattgatacataggaatgaaaa 1395  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 8981 - 9023
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  8981 gctacatcaacatgttccaaaaattgatacataggaatgaaaa 9023  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 17955 - 17913
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacataggaaagaaaa 172  Q
    ||||||||| |||||| |||||||||||||||||||| |||||    
T  17955 gctacatcaacatgttccaaaaattgatacataggaatgaaaa 17913  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 136900 - 136958
Alignment:
Q  1 aacatctttcaaaatcttcaataattatgcagcggaataattgcattaaacaacaacaa 59  Q
    |||||| ||||| ||| ||| ||||| |||||||||||| |||||| ||||||||||||    
T  136900 aacatccttcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaa 136958  T

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Target: scaffold0343 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 673 - 613
Alignment:
Q  149 aaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||   ||||||||| |  || ||||||||||||||||||||||    
T  673 aaaattgatacataggaaagaattcaaacaataaaa--tcccatcccacgtatcagagcccta 613  T

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Target: scaffold0239 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 8564 - 8500
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| ||||||||||||||||||   ||||||||  || || ||||||||||||||||||||||    
T  8564 ttcaaaatttgatacataggaaagaaattaaacaata--aaatcccatcccacgtatcagagcccta 8500  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 65840 - 65807
Alignment:
Q  175 aataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  65840 aataataattcccatcccacgtatcagagcccta 65807  T

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Target: scaffold0068; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 65897 - 65848
Alignment:
Q  133 acatcatcatgtttcaaaaattgatacataggaaagaaaaacaataataa 182  Q
    ||||||||| ||| |||||||||||||||||||| ||||| ||| |||||    
T  65897 acatcatcaagttccaaaaattgatacataggaaggaaaatcaacaataa 65848  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 63398 - 63334
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa---aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||||||||||||||||||||   || |||||  ||||| ||||||||||||||| ||||||    
T  63398 ttcaaaaattgatacataggaaagaagttaagcaata--aattcccatcccacgtatcagtgcccta 63334  T

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Target: scaffold1752 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1752
Description:

Target: scaffold1752; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 112 - 80
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  112 ataataattcccatcccacgtatcagagcccta 80  T

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Target: scaffold1426 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 369 - 337
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    ||||||||| |||||||||||||||||||||||    
T  369 ataataattttcatcccacgtatcagagcccta 337  T

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Target: scaffold1426; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Complemental strand, 504 - 476
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  504 aacaacaacaacaacggttaaattctcca 476  T

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Target: scaffold0720 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 4769 - 4685
Alignment:
Q  89 tggcatagaagcctcatcaaa-gaaatctaaacaaccacagagctacatcatca-tgtttcaaaaattgatacataggaaagaaa 171  Q
    ||||||| ||||||||||||| |||| | || || ||| || |||||| || || |||||||||| |||||||||||||||||||    
T  4769 tggcataaaagcctcatcaaaagaaaccgaatcatccatagggctacaacaacaatgtttcaaaatttgatacataggaaagaaa 4685  T

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Target: scaffold0279 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 6260 - 6228
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  6260 ataataattcccatcccacgtatcagagcccta 6228  T

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Target: scaffold0266 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 14579 - 14607
Alignment:
Q  49 aacaacaacaacaacggttaaattctcca 77  Q
    |||||||||||||||||||||||||||||    
T  14579 aacaacaacaacaacggttaaattctcca 14607  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 10871 - 10903
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacata 162  Q
    ||||||||| |||||||||||||||||||||||    
T  10871 gctacatcagcatgtttcaaaaattgatacata 10903  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 29412 - 29475
Alignment:
Q  145 ttcaaaaattgatacataggaaagaa-aaacaataataattctcatcccacgtatcagagcccta 208  Q
    ||||||| |||||||||||||| ||| ||||| ||| ||| | ||||||||||||||||||||||    
T  29412 ttcaaaatttgatacataggaatgaagaaacattaaaaatcc-catcccacgtatcagagcccta 29475  T

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Target: scaffold0139 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 16689 - 16606
Alignment:
Q  29 gcagcggaataattgcattaaa--caacaacaacaacggttaaattctccataaaattatcct-ggcatagaagcctcatcaaa 109  Q
    ||||||||||| |||||| |||  ||||||||| ||  ||| ||||||||||||||| || || |||||| |||||||||||||    
T  16689 gcagcggaatatttgcatcaaaagcaacaacaataattgtttaattctccataaaataattcttggcataaaagcctcatcaaa 16606  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 24355 - 24323
Alignment:
Q  176 ataataattctcatcccacgtatcagagcccta 208  Q
    |||||||||| ||||||||||||||||||||||    
T  24355 ataataattcccatcccacgtatcagagcccta 24323  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 56476 - 56444
Alignment:
Q  130 gctacatcatcatgtttcaaaaattgatacata 162  Q
    |||||||||||||||| ||||||||||||||||    
T  56476 gctacatcatcatgttccaaaaattgatacata 56444  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 41091 - 41031
Alignment:
Q  49 aacaacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaa 109  Q
    |||||||||| |||  ||| |||||||||  |||| ||||||||||| |||||||||||||    
T  41091 aacaacaacatcaaatgtttaattctccactaaataatcctggcataaaagcctcatcaaa 41031  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 103568 - 103481
Alignment:
Q  28 tgcagcggaataattgcattaaa-caacaacaacaacggttaaattctccataaaattatcctggcatagaagcctcatcaaagaaatc 115  Q
    |||||||||||| |||||| ||| | ||||||| ||| ||| |||  |||||||||| ||| ||||||| ||||||||||||| |||||    
T  103568 tgcagcggaatatttgcatcaaaacgacaacaataaccgtttaatcatccataaaat-atcttggcataaaagcctcatcaaataaatc 103481  T

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