View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11648_high_13 (Length: 374)
Name: NF11648_high_13
Description: NF11648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11648_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 12 - 352
Target Start/End: Original strand, 48566759 - 48567100
Alignment:
| Q |
12 |
tacctatattctttgagttgacttttgcaatgagattcatgtttatttaacaagttatacggttgtttcaaagtttaaagttccaaatctcttcctcgaa |
111 |
Q |
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| T |
48566759 |
tacctttattctttgagttgatttttacaatgagattcatgtttatttaacaagttatacggttgtttcaaagtttaaagttccaaatctcttcctcaaa |
48566858 |
T |
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| Q |
112 |
acgaaaatgtttaaaatctcaattatttaagttcaaattccccactgtgccctcatggaacccgcgaaacatagtttgagacttagtaagtgagttgaaa |
211 |
Q |
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| T |
48566859 |
acgaaaatgtttaaaatctcaattatttaagttcaaattccccactgtgccctcatggaacccgcgaaatatagtttgagacttagtaagtgagttgaaa |
48566958 |
T |
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| Q |
212 |
ttttggcaattgaatttccatcatcatcaagcaatttggtaccagcgtcgttttcatttttcatagctataacttctgagtgggatta-gatcatttgat |
310 |
Q |
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| T |
48566959 |
ttttggcaattgaatttccatcatcatcaagcaatttggtaccagtgtcgttttcatttttcatagctataacttctgagtgggattaggatcatttgat |
48567058 |
T |
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| Q |
311 |
gacaataagttaattgattaacatttccccgccattccttcc |
352 |
Q |
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||| ||||||| ||||||||||||||||| ||| |||||||| |
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| T |
48567059 |
gactataagttcattgattaacatttccctgccgttccttcc |
48567100 |
T |
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