View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11648_high_25 (Length: 250)
Name: NF11648_high_25
Description: NF11648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11648_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 28638294 - 28638541
Alignment:
| Q |
1 |
ctcacctctaatagcatctctaataaagaacttaaacaatttttcactctaacaatacaactctcttaaaaaatcaaaattagctcaaaagttatcacat |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
28638294 |
ctcacctcaaatagcatctctaataaagaacttaaacaatttttcactctaacaatacaactctcctaaaaaatcaaaattagctcaaaagttatcacat |
28638393 |
T |
|
| Q |
101 |
attttggttggttaag-----aactaaatccatgtcacaaaacaaaacctagttaacaactgctattagaaatggaagaaagacttaccagttctgatat |
195 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28638394 |
attttggttggttaagataagaactaaatccatgtcacaaaacaaaacctaattaacaactgctattagaaatggaagaaagacttaccagttctgatat |
28638493 |
T |
|
| Q |
196 |
gttccgatcaatccgcgttcataaacgacaccaagtgtgttcatctca |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
28638494 |
gttccgatcaatccgcgttcataaacgacaccaagtgtgttgatctca |
28638541 |
T |
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